ID:

dsi_10880

 Coordinate:

3r:26727094-26727243 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.4 -3.1 -3.1

Flybase annnotation

three_prime_UTR [3r_26726836_26727209_+]; exon [3r_26726548_26727209_+]

No Repeatable elements found

Sense Strand Reads

######################################################################################################################################################################------------------------------------------------------------------------------------
AAGTGGCCAAAAATGAAGAACAATTGCCTATCAAGTGGTTTTACATTAAGGTAAATTCATCAATAAATTTGCCAAATCTAAGTAGTTCATGCTTGCAATAGCTAAGATTAGGGGTTCAATTTCATTTGTACAATATAAGCTTGAATAAAGTACTATTAAAAACGCAGTCCCTTGTATTTGAGTATAGAGATAGTGTTCTAAGATATTTATCTTTTAAAAAAGTAGAGTTCCTAAGTATTAGATACTATTC
*********************************************************************************************.........((((.(((...((.(((......))).))....))).))))..********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M053
female body
...................................................................TTTGCCAAGTCTAAGTAGTTCATGCT............................................................................................................................................................. 26 1 1 6.00 6 6 0 0 0 0 0 0 0 0
.......................................................TTCATCAATAAATTTGCCAAGTCTAAGT....................................................................................................................................................................... 28 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.............TGAAGAACAATTGCCTATCAAGTGGT................................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0
........................TGCCTATCAAGTGGTTTTACATTAAGG....................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......CAAAAATGAAGAACAATTGCCTATCAAG....................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...TGGCCAAAAATGAAGAACAATTGCC.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......CCAAAAATGAAGAACAATTGCCT............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................TGCAATAGCTAAGATT............................................................................................................................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................CATGCTTGCAATAGCTAAGATTAGGGGT....................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0
AAGTGGCCAAAAATGAAGAACAAT.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
AAGTGGCCAAAAATGAAGAACAATTGCC.............................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................TTACATTAAGGTAAATTCATCAATA......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.............TGAAGAACAATTGCCTATCAAGTGG.................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...TGGCCAAAAATGAAGAACAATTGCAA............................................................................................................................................................................................................................. 26 2 1 1.00 1 0 0 0 0 1 0 0 0 0
........................................................................................................................TTCATTTGTACAATATAAGCTTGAA......................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.................................................................AATTTGCCAAATCTAAGTAGTTCA................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................ATGCTTGCAATAGCTAAGATTAGGGGT....................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................TTGCCTATCAAGTGGTTTTACATTAAGG....................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TCTAAGTAGTTCATGCTTGCAATAGC.................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................CATGCTTGCAATAGCTAAGATTAGGGG........................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................AAATTTGCCAAGTCTAAGTAGTTCATGCT............................................................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................TTCAATTTCATTTGTA........................................................................................................................ 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................TAAATTCATCATTAAAATTGC.................................................................................................................................................................................. 21 2 4 0.25 1 0 0 0 0 0 0 0 0 1
.......................................................................................CATGCTTGCGATAGTTAAAA............................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................TATAGAGATAGTGTGATGA................................................. 19 3 20 0.15 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAGTGATCTTTTAAAAAA............................. 18 2 20 0.10 2 2 0 0 0 0 0 0 0 0
...................................................................................................AGCGAAGATTAGAGGTT...................................................................................................................................... 17 2 12 0.08 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TTCACCGGTTTTTACTTCTTGTTAACGGATAGTTCACCAAAATGTAATTCCATTTAAGTAGTTATTTAAACGGTTTAGATTCATCAAGTACGAACGTTATCGATTCTAATCCCCAAGTTAAAGTAAACATGTTATATTCGAACTTATTTCATGATAATTTTTGCGTCAGGGAACATAAACTCATATCTCTATCACAAGATTCTATAAATAGAAAATTTTTTCATCTCAAGGATTCATAATCTATGATAAG
*********************************************************************************************************.........((((.(((...((.(((......))).))....))).))))..********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
...............................................................................................................................................................TCTGCGTAGGGGAACATAAACT..................................................................... 22 3 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:26727044-26727293 + dsi_10880 AAGT-------GGCCAAA-AATGAAGAACAATT-GCCTATCAAGTGGTTTTAC-A-TTAAGGTAAATTCATCAATAAAT-TTGCCAAATCTAAGTAGTTCATGCTTGCAATAGCTAAGATTAGG-GGTT-CAATTTCAT-TTGTACA-A-----TATAAGCTTGAATAAAGTACTAT-TAAAAACGCAGTCCCT------TGTATTTGAGTATAGAG------------ATAG-----------------------TGTTC----------------------------------------TAAGA-----------------------------TATTTATCTT-----------------------------------------------------------------------TT-----------------------------------AAAAAA----------------------------------------------GT-------------------------------AGAGTTCCTAA------------------------G-------TATTAGAT-ACTATTC
droSec2 scaffold_31:107427-107676 + AAGT-------GGCCAAA-AATGAAGAACAATT-GCCTATCAAGTGGTTTTAC-A-TTAAGGTAAATTCATCAATAAAT-TTGCCAAATCTAAGTAGTTCATGCTTGCAATAGCTAAGATTAGG-GGTT-CAATTTCAT-TTGTACA-A-----TATAAGCTTGAATAAAGTACTAT-TAAAAATGCAGTCCCT------TGTATTTGAGTATAGAG------------ATAG-----------------------TGTTC----------------------------------------TAAGA-----------------------------TATTTATCTT-----------------------------------------------------------------------TT-----------------------------------AAAAAA----------------------------------------------GT-------------------------------AGAGTTCCTAA------------------------G-------TATTAGAT-ACTATTC
dm3 chr3R:27447032-27447291 + AAGT-------GGCCAAA-AATGAAGAACAATT-GCCTATCAAGTGGTTTTAC-A-TTAAGGTAAATTCATCACTAAAT-TTGCCAAATATAAGTAGTTCATGCTTGCAATAGCTAAGATTAGG-GGTT-CAATTTCAC-TTGTATA-A-----TATAAGCTTGAATAAAATACTAT-TAAAAACGCAGTCCTT------TATATTTGAGTATAGAG------------ATGT-----------------------TCGTC----------------------------------------TAAGA-----------------------------TCTTTATCTGCAATACCAA--------------------------------------------------------------TT-----------------------------------AAAAAA----------------------------------------------GT-------------------------------AGAGTTCTTAA------------------------G-------TATTTGACAACTATTC
droEre2 scaffold_4820:527312-527562 - AAGA-------GGCCAAA-CATGAGGAAGAGTT-GCGTATCAAGTGGTTTAAC-A-TTAAGGTAAATTCAACATTAAA--TTGCCAAATATAAGTAGTTCGT--------------------GG-GGTT-CAATTTCATATTATACAAATCATATATAAGCTTGAATAAAGTACTATCTAAAGATGCACTCCCT------TGTATTTGAGTATGGC-----TGTGGGAGATGG-----------------------CGTTT----------------------------T----------GTAAGA-----------------------------TCTTCATCTCCTATACCAA--------------------------------------------------------------GT-----------------------------------TAGGAA----------------------------------------------GT-------------------------------AGTGTTC-TAA------------------------GA------TATT-----ATTATTC
droYak3 3R:28383219-28383450 + AAGA-------GGCCAAA-AATGCAGAACAATT-GCTTATGAAGTGGTTTTAC-A-TTAAGGTAAATGCATCATTCAA--TTGCCAAATATAAGTAGTTCATGTCTGCAGTAGTTAAGATGTGG-GGTT-CAATTTCATATTATACAAA-----TATAAGCTTAAATAAAGTACCATTTAAAAATGCACTCCTT------TGTATTCGGGTATTGAG------------ATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------ATAAAA----------------------------------------------GT-------------------------------AGTGTTC-TAA------------------------G-----ACTA-TATAT-ATTATTC
droEug1 scf7180000409488:460258-460532 - ---T-------GGCCAAA-TAG---------------TACGAAGTGGCTTTGC-G-TTAAGGAAAACCCATCAACAACT-TTGCCAAATATTAGTGGTTCATGTTTGCAATAGTTAAGACCAAG-GATTACAATTTCAC-TTATACAAA-----TTTAAGCTTGAGTAAACGATAATTTAAAAGTGTATTTTAA------TTTAATTGAATACAGAA------------AAGG------TGT--CCGAACA-A---TGT----------AGTCTAAACAATTATTTTATT----------TTAAGA-----------------------------TTTCTGACTG-----------------------------------------------------------------------TC-----------------------------------CAA-------------------------------------------------------------------------------------------AAATAAATTGCTGAATAAACCCGA--A-------AGTCATAA-TTTGTTC
droBia1 scf7180000302035:105273-105554 + AAGT-------GGCCAA---ATGAAGAATAATT-GCCTATCAAGTGGCTTTGC-G-TTAAGGTAAATCCAC------AT-TTGCCAAATATTAGTAGTTCATGTTTGCAATAGTTAAGACGCGGGGGTTCCGACTTCATATTAAACAGA-----TATAAGCTTAAATAAAGGATATTTTAAAAGTGTATTGCT---------TATCTGATTACATT-----TATCGTTG---------------CTGACAAGA---TGT---------------------------------------------------------------------------------------AACATCAATTGATCTAATAGTTATATGTTAGCTTATTAATTTTAATCGTTTGCCAACATGTTTGACTTCTTT-----------------------------------ATAAAA----------------------------------------------G------------------------------------------------------------------------------------------C
droTak1 scf7180000415712:514608-514872 + AAGT-------GGCCA--------------------------AGTGGCTTTAC-GTTTAAGGTAAATCCATCATTAAAT-TTGCCAAATATTAGTAGTTCATCGTTGCAGTAGTTAAGATGAGG-GGTA-GCATTTCAAATTATACAAA-----TATAAGCTTGAATAAAAGATATTTTAAAAGTGTATTTATATTTGACTGTATTTGAATACAGT-----TGCGGTCG---------------CTGATTAAA---TAT----------AATTTAT--------------------------CAAAA--------------------TAGTTTGTGCTTTATCTCTTATTCAAA--------------------------------------------------------------AT-----------------------------------TATAAATTTATTTT-------------------------------------------------------------------------------TAA------------------------AA------TGTT-----ATAATTT
droEle1 scf7180000491194:1483322-1483579 + AAGT-------GGCCAAA-AATAATGAACAATT-GCTGATCAAGTGGCTTTAC-G-TTGAGGTAAATCCATAATTAAAT-TTGCCAAATATAAGTAGCTCATTTTTGCAGTAGCAAAGAAGAGG-GGTTAAAATATCATATTATACAA-------ATAAGCTTAAATAAAATAAATT-TAAAAAATCGCTCAA---------------------------------------------------------------TGTTTTAAGAGATTCTCTAGACTAATATTTAATTAGATTTAAATTTAAAAATTCTAAGGTTTTATTATATTAAGCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTATC
droRho1 scf7180000779322:261511-261674 - AAGC-------GGCCAAA-AATTAAGAACAATT-ACTTATCAAGTGGCTTCAC-G-TTGAGGTAAATTCATAATAAAAT-TTGCCAAATATTAATTATTCATGTTTGCAATAGTTAAGATGAGG-GTTA-AAATTTCATATTATACAGA-----TATAAGCTTAAATAAAATATATT-TAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454114:129107-129369 + AAGT-------GGCCAAA-AATGA---------------------------AC-A-TAGAGGTAAACCCATCATTACAT-TTGCCAAATATTAGTAGTTCTTGTTTGCGTTAGTAAAAATACGG-GGTTACAACATCATATTATACAAA-----TATAAGCCTGAATAAAAGATATT-TAAAAA-GCTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGATTTTGATGATTTGAATTCCGCCGAATAAGTTGTACAGGATATTCATATTAAAATTCAACATGCCCTTAAATACAGTATTTACTTGTTTTGTAAGTCGGAACT-TTAAAC-ATAAATT
droAna3 scaffold_12911:3661164-3661490 - CAATCTTCTCTGGCCAACTCATTATGATCATTTTTCCTGCGAAACCGTGTTAAAGTTTAAAGTATATCGATTAATAAACAATGCCAAATAGTAATGATTTGATTTGAAAATTGTCGAATCATGT-CGAT-CAA-----------------------------TAAATGAAATA-TAT-TAAATATACATTTATGCC----CCCATTTGTGTGAGAATATTTTGTGTGAAATGTTTTCATTGTTAATGTAAAGCTTCC-------------------------------------------------A--------------------T------------AACTTGTGTACTAT--------------------------------------------------------------TTTATGTTTTAGAGCTATTACCACTATATGTTTAGATTAACAAATTATTATTAAAGCCATGTGACTTCTATGAACTTGCTTCTACTG------------------------------------------------------------------------------------------GAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGT-------GGCCAAA-AATGAAGAACAATT-GCCTATCAAGTGGTTTTAC-A-TTAAGGTAAATTCATCAATAAAT-TTGCCAAATCTAAGTAGTTCATGCTTGCAATAGCTAAGATTAGG-GGTT-CAATTTCAT-TTGTACA-A-----TATAAGCTTGAATAAAGTACTAT-TAAAAACGCAGTCCCT------TGTATTTGAGTATAGAG------------ATAG-----------------------TGTTC----------------------------------------TAAGA-----------------------------TATTTATCTT-----------------------------------------------------------------------TT-----------------------------------AAAAAA----------------------------------------------GT-------------------------------AGAGTTCCTAA------------------------G-------TATTAGAT-ACTATTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................TGAAGAACAATT-GCCTATCAAGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200200000000000000
................................T-GCCTATCAAGTGGTTTTAC-A-TTAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..............CAAA-AATGAAGAACAATT-GCCTATCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...T-------GGCCAAA-AATGAAGAACAATT-GCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.............CCAAA-AATGAAGAACAATT-GCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.........................................................................................................TGCAATAGCTAAGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
...................................................................................................CATGCTTGCAATAGCTAAGATTAGG-GGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
AAGT-------GGCCAAA-AATGAAGAACAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
AAGT-------GGCCAAA-AATGAAGAACAATT-GCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.................................................TTAC-A-TTAAGGTAAATTCATCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
.....................TGAAGAACAATT-GCCTATCAAGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...T-------GGCCAAA-AATGAAGAACAATT-GCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
......................................................................................................................................TTCAT-TTGTACA-A-----TATAAGCTTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
............................................................................AAT-TTGCCAAATCTAAGTAGTTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
....................................................................................................ATGCTTGCAATAGCTAAGATTAGG-GGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...............................TT-GCCTATCAAGTGGTTTTAC-A-TTAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................TCTAAGTAGTTCATGCTTGCAATAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...................................................................................................CATGCTTGCAATAGCTAAGATTAGG-GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...............................................................................................................................TT-CAATTTCAT-TTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1630.33100000001000000000
droSec2
AAGT-------GGCCAAA-AATGAAGAACAATT-GCCTATCAAGTGGTTTTAC-A-TTAAGGTAAATTCATCAATAAAT-TTGCCAAATCTAAGTAGTTCATGCTTGCAATAGCTAAGATTAGG-GGTT-CAATTTCAT-TTGTACA-A-----TATAAGCTTGAATAAAGTACTAT-TAAAAATGCAGTCCCT------TGTATTTGAGTATAGAG------------ATAG-----------------------TGTTC----------------------------------------TAAGA-----------------------------TATTTATCTT-----------------------------------------------------------------------TT-----------------------------------AAAAAA----------------------------------------------GT-------------------------------AGAGTTCCTAA------------------------G-------TATTAGAT-ACTATTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........GGCCAAA-AATGAAGAACAATT-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
dm3
AAGT-------GGCCAAA-AATGAAGAACAATT-GCCTATCAAGTGGTTTTAC-A-TTAAGGTAAATTCATCACTAAAT-TTGCCAAATATAAGTAGTTCATGCTTGCAATAGCTAAGATTAGG-GGTT-CAATTTCAC-TTGTATA-A-----TATAAGCTTGAATAAAATACTAT-TAAAAACGCAGTCCTT------TATATTTGAGTATAGAG------------ATGT-----------------------TCGTC----------------------------------------TAAGA-----------------------------TCTTTATCTGCAATACCAA--------------------------------------------------------------TT-----------------------------------AAAAAA----------------------------------------------GT-------------------------------AGAGTTCTTAA------------------------G-------TATTTGACAACTATTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................TGCAATAGCTAAGATTAGG-GGTT-CAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000
.....................................................................................................TGCTTGCAATAGCTAAGATTAGG-GGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000001010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................AATAGCTAAGATTAGG-GGTT-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...T-------GGCCAAA-AATGAAGAACAATT-GCCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCATGCTTGCAATAGCTAAGATTAGG-GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................TGCTTGCAATAGCTAAGATTAGG-GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AAAT-TTGCCAAATATAAGTAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAGT-------GGCCAAA-AATGAAGAACAATT-GCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AATGAAGAACAATT-GCCTATCAAGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
...................................................................................................CATGCTTGCAATAGCTAAGATTAGG-GGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TAAGATTAGG-GGTT-CAATTTCAC-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................A-AATGAAGAACAATT-GCCTATCAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TGCAATAGCTAAGATTAGG-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................TCATGCTTGCAATAGCTAAGATTAGG-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGCTTGCAATAGCTAAGATTAGG-GGTT-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTGCCAAATATAAGTAGTTCATGCTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAT-TAAAAACGCAGTCCTT------TATATT.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TAAGGTAAATTCATCACTAAAT-TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TAAGATTAGG-GGTT-CAATTTCAC-TTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGT-------GGCCAAA-AATGAAGAACAATT-GCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................AAGTGGTTTTAC-A-TTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.AGT-------GGCCAAA-AATGAAGAACAATT-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GCTTGCAATAGCTAAGATTAGG-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................ATGCTTGCAATAGCTAAGATTAGG-GGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TAC-A-TTAAGGTAAATTCATCACTAAAT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGAAGAACAATT-GCCTATCAAGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CATGCTTGCAATAGCTAAGATTAGG-ATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TAAGATTAGG-GGTT-CAATTTCAC-TTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TGAGTATAGAG------------ATGT-----------------------TCGTC----------------------------------------TAAGA-----------------------------......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GTAGTTCATGCTTGCAATAGCTAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GATTAGG-GGTT-CAATTTCAC-TTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CTTGCAATAGCTAAGATTAGG-GGTT-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAGCTAAGATTAGG-GGTT-CAATTTCAC-T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................TTGCAATAGCTAAGATTAGG-C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................CAATAGCTAAGATTAGG-GGTT-CAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAA-AATGAAGAACAATT-GCCTATCAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................T-TTGCCAAATATAAGTAGTTCATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATT-GCCTATCAAGTGGTTTTAC-A-TTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AAT-TTGCCAAATATAAGTAGTTCATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTCATCACTAAAT-TTGCCAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TCACTAAAT-TTGCCAAATATAAGTAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TGCCAAATATAAGTAGTTCATGCTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAGAACAATT-GCCTATCAAGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TTGCAATAGCTAAGATTAGG-GGTT-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................TAGCTAAGATTAGG-GGTT-CAATTTCAC-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................A-AATGAAGAACAATT-GCCTATCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCATGCTTGCAATAGCTAAGATTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTCATGCTTGCAATAGCTAAGATTAGG-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TATAGAG------------ATGT-----------------------TCGTC----------------------------------------TAAGA-----------------------------TCTT..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................CATCACTAAAT-TTGCCAAATATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................TAGTTCATGCTTGCAATAGCTAAGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................ATGCTTGCAATAGCTAAGATTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AATGAAGAACAATT-GCCTATCAAGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................A-AATGAAGAACAATT-GCCTATCAAGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................TGAAGAACAATT-GCCTATCAAGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TCACTAAAT-TTGCCAAATATAAGTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TT-GCCTATCAAGTGGTTTTAC-A-TTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TGCAATAGCTAAGATTAGG-GGTT-CAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................T-CAATTTCAC-TTGTATA-A-----TATAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TATAAGCTTGAATAAAATACTAT-TAT................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CAATAGCTAAGATTAGG-GGTT-CAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................T-TTGCCAAATATAAGTAGTTCATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................ATTAGG-GGTT-CAATTTCAA-CG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................TAAGATTAGG-GGTT-CAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.................A-AATGAAGAACAATT-GCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TGCAATAGCTAAGATTAGA-TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droEre2
AAGA-------GGCCAAA-CATGAGGAAGAGTT-GCGTATCAAGTGGTTTAAC-A-TTAAGGTAAATTCAACATTAAA--TTGCCAAATATAAGTAGTTCGT--------------------GG-GGTT-CAATTTCATATTATACAAATCATATATAAGCTTGAATAAAGTACTATCTAAAGATGCACTCCCT------TGTATTTGAGTATGGC-----TGTGGGAGATGG-----------------------CGTTT----------------------------T----------GTAAGA-----------------------------TCTTCATCTCCTATACCAA--------------------------------------------------------------GT-----------------------------------TAGGAA----------------------------------------------GT-------------------------------AGTGTTC-TAA------------------------GA------TATT-----ATTATTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................TGCCAAATATAAGTAGTTCGT--------------------GG-GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25116.001610000015
................................T-GCGTATCAAGTGGTTTAAC-A-TTAAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000003
................................T-GCGTATCAAGTGGTTTAAC-A-TTAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001
...........GGCCAAA-CATGAGGAAGAGTT-GCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
droYak3
AAGA-------GGCCAAA-AATGCAGAACAATT-GCTTATGAAGTGGTTTTAC-A-TTAAGGTAAATGCATCATTCAA--TTGCCAAATATAAGTAGTTCATGTCTGCAGTAGTTAAGATGTGG-GGTT-CAATTTCATATTATACAAA-----TATAAGCTTAAATAAAGTACCATTTAAAAATGCACTCCTT------TGTATTCGGGTATTGAG------------ATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----------------------------------ATAAAA----------------------------------------------GT-------------------------------AGTGTTC-TAA------------------------G-----ACTA-TATAT-ATTATTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
---T-------GGCCAAA-TAG---------------TACGAAGTGGCTTTGC-G-TTAAGGAAAACCCATCAACAACT-TTGCCAAATATTAGTGGTTCATGTTTGCAATAGTTAAGACCAAG-GATTACAATTTCAC-TTATACAAA-----TTTAAGCTTGAGTAAACGATAATTTAAAAGTGTATTTTAA------TTTAATTGAATACAGAA------------AAGG------TGT--CCGAACA-A---TGT----------AGTCTAAACAATTATTTTATT----------TTAAGA-----------------------------TTTCTGACTG-----------------------------------------------------------------------TC-----------------------------------CAA-------------------------------------------------------------------------------------------AAATAAATTGCTGAATAAACCCGA--A-------AGTCATAA-TTTGTTCSizeHit CountTotal NormTotal
No Reads
droBia1
AAGT-------GGCCAA---ATGAAGAATAATT-GCCTATCAAGTGGCTTTGC-G-TTAAGGTAAATCCAC------AT-TTGCCAAATATTAGTAGTTCATGTTTGCAATAGTTAAGACGCGGGGGTTCCGACTTCATATTAAACAGA-----TATAAGCTTAAATAAAGGATATTTTAAAAGTGTATTGCT---------TATCTGATTACATT-----TATCGTTG---------------CTGACAAGA---TGT---------------------------------------------------------------------------------------AACATCAATTGATCTAATAGTTATATGTTAGCTTATTAATTTTAATCGTTTGCCAACATGTTTGACTTCTTT-----------------------------------ATAAAA----------------------------------------------G------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
AAGT-------GGCCA--------------------------AGTGGCTTTAC-GTTTAAGGTAAATCCATCATTAAAT-TTGCCAAATATTAGTAGTTCATCGTTGCAGTAGTTAAGATGAGG-GGTA-GCATTTCAAATTATACAAA-----TATAAGCTTGAATAAAAGATATTTTAAAAGTGTATTTATATTTGACTGTATTTGAATACAGT-----TGCGGTCG---------------CTGATTAAA---TAT----------AATTTAT--------------------------CAAAA--------------------TAGTTTGTGCTTTATCTCTTATTCAAA--------------------------------------------------------------AT-----------------------------------TATAAATTTATTTT-------------------------------------------------------------------------------TAA------------------------AA------TGTT-----ATAATTTSizeHit CountTotal NormTotal
No Reads
droEle1
AAGT-------GGCCAAA-AATAATGAACAATT-GCTGATCAAGTGGCTTTAC-G-TTGAGGTAAATCCATAATTAAAT-TTGCCAAATATAAGTAGCTCATTTTTGCAGTAGCAAAGAAGAGG-GGTTAAAATATCATATTATACAA-------ATAAGCTTAAATAAAATAAATT-TAAAAAATCGCTCAA---------------------------------------------------------------TGTTTTAAGAGATTCTCTAGACTAATATTTAATTAGATTTAAATTTAAAAATTCTAAGGTTTTATTATATTAAGCTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTATCSizeHit CountTotal NormTotal
No Reads
droRho1
AAGC-------GGCCAAA-AATTAAGAACAATT-ACTTATCAAGTGGCTTCAC-G-TTGAGGTAAATTCATAATAAAAT-TTGCCAAATATTAATTATTCATGTTTGCAATAGTTAAGATGAGG-GTTA-AAATTTCATATTATACAGA-----TATAAGCTTAAATAAAATATATT-TAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAGT-------GGCCAAA-AATGA---------------------------AC-A-TAGAGGTAAACCCATCATTACAT-TTGCCAAATATTAGTAGTTCTTGTTTGCGTTAGTAAAAATACGG-GGTTACAACATCATATTATACAAA-----TATAAGCCTGAATAAAAGATATT-TAAAAA-GCTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGATTTTGATGATTTGAATTCCGCCGAATAAGTTGTACAGGATATTCATATTAAAATTCAACATGCCCTTAAATACAGTATTTACTTGTTTTGTAAGTCGGAACT-TTAAAC-ATAAATTSizeHit CountTotal NormTotal
No Reads
droAna3
CAATCTTCTCTGGCCAACTCATTATGATCATTTTTCCTGCGAAACCGTGTTAAAGTTTAAAGTATATCGATTAATAAACAATGCCAAATAGTAATGATTTGATTTGAAAATTGTCGAATCATGT-CGAT-CAA-----------------------------TAAATGAAATA-TAT-TAAATATACATTTATGCC----CCCATTTGTGTGAGAATATTTTGTGTGAAATGTTTTCATTGTTAATGTAAAGCTTCC-------------------------------------------------A--------------------T------------AACTTGTGTACTAT--------------------------------------------------------------TTTATGTTTTAGAGCTATTACCACTATATGTTTAGATTAACAAATTATTATTAAAGCCATGTGACTTCTATGAACTTGCTTCTACTG------------------------------------------------------------------------------------------GAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGCTATTACCACTATATGTTTAGATT...............................................................................................................................................2911.001100000
.....................TTATGATCATTTTTCCTGCGAAACCGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTTTAGAGCTATTACCACTATA.........................................................................................................................................................2611.001100000

Generated: 05/19/2015 at 05:28 AM