ID:

dsi_10836

 Coordinate:

3l:19961944-19962093 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.2 -28.0 -27.8

Flybase annnotation

CDS [3l_19962094_19962920_-]; exon [3l_19962094_19963276_-]; intron [3l_19959230_19962093_-]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTTGCGTGTCCAGGTGACACCTTCGAAAAACCCATATACACCAATATACGCCACATATGCCTGCCTTATACCAACTCAATTGCATATGGCTAGTCGGTTTATTTTGCAATTCGATGGAAACTCGTTATGAGCGAGAGATCTTGTTTGTGGTCGTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
**************************************************.((((((((((((...((((......................))))...))))))...................(((..(((((((((...((((....)))).....))))))).))))).))))))....(((((((....)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
...............................ACTTCATCGACGAGGCCAGAAC..................................................................................................................................................................................................... 22 3 1 2.00 2 1 1 0 0 0 0 0
..............................................................................................................................................................................................GATCTTGTTTGTGGTCGTGTGTTG.................................... 24 0 1 1.00 1 0 0 0 0 1 0 0
..............................TACTTCATCGACGAGGCCA......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0
.............................CTACTTCATCGACGAGGCC.......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
.............................CTACTTCATCGACGAGGCCAGAAC..................................................................................................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0
..........................GTTCTACTTCATCGACGAGGCCAGG....................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................ATGGAAACTCGTTATGAGCGAGAG........................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
.....................AAGCGGTTCTACTTCATCGACGAG............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
.............................CTACTTCATCGACGA.............................................................................................................................................................................................................. 15 0 2 0.50 1 0 0 0 0 0 1 0
...................................................................................................................................................................TTCGATCGAAACCCGTTA..................................................................... 18 2 6 0.17 1 0 0 0 1 0 0 0
.......................................................................CACATTCGAAGAACCCGTAT............................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 1
........................................................................ACCTTCGAAAAACCGC.................................................................................................................................................................. 16 2 20 0.15 3 0 0 3 0 0 0 0
........GCACCTCTAGCTCAACCGGT.............................................................................................................................................................................................................................. 20 3 15 0.13 2 0 0 0 0 0 0 2
.........................................................................................................................................................TATTTTGCAAATCGATG................................................................................ 17 1 16 0.06 1 0 0 1 0 0 0 0
..........ACCTCTAGCTCAACCGGTA............................................................................................................................................................................................................................. 19 3 17 0.06 1 0 0 0 0 0 0 1
.......GGGACCTAAGGCTCA.................................................................................................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 0 0 1
......................................................................................................................................................................................................TTGTGGTCGTGGGTT..................................... 15 1 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

TAGGAGTCCCTGGAGTTCGAGTTCGCCAAGATGAAGTAGCTGCTCCGGTCCACTCAACGCACAGGTCCACTGTGGAAGCTTTTTGGGTATATGTGGTTATATGCGGTGTATACGGACGGAATATGGTTGAGTTAACGTATACCGATCAGCCAAATAAAACGTTAAGCTACCTTTGAGCAATACTCGCTCTCTAGAACAAACACCAGCACACAACCACCACGGTGTTAACAACGAGAACAATAACCGGGTA
**************************************************.((((((((((((...((((......................))))...))))))...................(((..(((((((((...((((....)))).....))))))).))))).))))))....(((((((....)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body
..................................................................CCACTGTCGAAGCTATTTAGGT.................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0
.............................................................CAGGTCTAATGTAGAAGCTT......................................................................................................................................................................... 20 3 4 0.75 3 3 0 0 0 0 0 0
........................................................ACGCACAGTTCCAATGGGGA.............................................................................................................................................................................. 20 3 2 0.50 1 0 0 0 1 0 0 0
............................................................ACAGGTCTAATGTAGAAGCTT......................................................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0
..........TGGAGTTCGAGTTTTCCCAGA........................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 1 0 0 0 0
.........................................................................................................................CATGGTTGAGTTAAAGTA............................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 1
...............TGCGAGTTCTCCCAGATGAA....................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 1 0 0
...............TTCGAGTTTGCCAAGGAGAA....................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 1 0 0
.................................................................................................................GGAGGGAATTTGGTTGA........................................................................................................................ 17 2 8 0.13 1 0 0 0 0 0 1 0
........................GGCAAGATGAAGTAGTTG................................................................................................................................................................................................................ 18 2 9 0.11 1 0 0 1 0 0 0 0
.................................................................................................................................AGTTAACGTCTACCTATC....................................................................................................... 18 2 10 0.10 1 0 1 0 0 0 0 0
...............................................................................................................................................................................AGCAATACTCGGTCT............................................................ 15 1 10 0.10 1 0 1 0 0 0 0 0
....................................................................................................................CGGAATCTGGTTGAG....................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 1 0
.............................................................................................TGGTTATATACGGTG.............................................................................................................................................. 15 1 17 0.06 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................CCACGGTGTTAACAGTG................. 17 2 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:19961894-19962143 - dsi_10836 ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------GAAAAACCCATATACACCAATATACGCC---------A-C---------A--TAT-G-------------------------------------CCT-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
droSec2 scaffold_11:287112-287361 - ATCCTCAGGGACCTCAAGCTCAAGCGCTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------GAAAAACCCATATACACCAATATACGCC---------A-C---------A--TAT-G-------------------------------------CCT-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
dm3 chr3L:20393322-20393575 - ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------GAAAAACCCATATACACCAATATACGCC---------A-C---------A--TAT-G-------------------------------------CCT-------GACTTATACCAACTCAA-TTGCATA--------TG--GCT----------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
droEre2 scaffold_4784:20093189-20093446 - ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATACACCAATATAAGCC---------A-C---------A--TAT-G-----------------TAT----------AT--GTACCT-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCAAT
droYak3 3L:20166787-20167036 + ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATACACTTATATACTCC---------A-C---------A--TAT-A-------------------------------------CCA-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCAGTTTATTTTGCAATTCGATGA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
droEug1 scf7180000409711:5588557-5588796 + ATCCTCAGGGATCTTAAGCTGAAGCGATTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATACAC---------------------------------C--------A-TA----T-----------------------ATACCA-------ACCGTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
droBia1 scf7180000302193:5664462-5664727 + ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCG-----------------------------------------------------------TCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATAC-----------------------------------CAGTCGGTCA-TATGTAT---GTATACATATGTACACCC--GTACCC-------ACCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
droTak1 scf7180000415254:273583-273846 + ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GTGC---------------------------------------------------------GTCCAGGT------------------------------GACACCTTACAAAAAAAAAAAAAACCCATATAC-----------------------------------CA-----------TGCAT---ATATACATGTGTATTTAT--GTACCCACCTTATAGCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTT----------
droEle1 scf7180000491193:4721036-4721282 - ATCCTCAGGGACCTCAAGCTCAAGCGATTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGTCC-----C-CG----------------------------------------------GTCCCGGT------------------------------GACACCTTC---------AAAAAACCTATATCC----------------------------------A--TAT-GCCA-TA----T---G----------------------TAT-------GCCTTATAGCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GATATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCGC
droRho1 scf7180000769695:4065-4312 + ATTCTCAGGGACCTCAAGCTCAAGCGTTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGTCC-----C-CA----------------------------------------------GTCCCGGT------------------------------GACACCTTC---------AAAAAACCC--------------------------C-A------TATCCA--TAT-GCCA-TA----T---G----------------------TAT-------ACCTTATATCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCGC
droFic1 scf7180000454113:1930743-1930991 + ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCAAGGTGAGTT----------------------------GAGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAAA------------------------ACTCC-A------TATAC-CATAT-GCCA-TA----TTCCG----------------------TAT-------ACCTTGTGCCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGCC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCGC
droKik1 scf7180000302441:3118101-3118360 - ATCCTGCGAGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GTGT--------------------------------------------------------------GGT------------------------------GACACCTTC---------GAAATCCCCCT--ACATCCATATAC-------------------------CAAAA-AGC---------------------------------------------------AACCAGCTCAA-TTGCATACATGTCTCT----------------G--GCTTTTGG---------TCGCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT------ATTT------GCCGTGTGTGCTTGTGT--GAGTTTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCTAT
droAna3 scaffold_13337:10760121-10760421 - ATCCTCAGGGACCTGAAGCTCAAGCGGTTCTACTTCATCGACGAGGCGAGGTGAGTTTTCAAAAAAAAAAAAAAAAAAATGCATTGCGTAGCGTTTC-CTGTCTGTCCCAAT---------------------CATCCAGCAG-CTGTCCAGGTGATG----------------TGGAGACGGAGACACCTTC---------AAAAAATCCCAATACAC---------------------------------C----------------------------------------------------------------ACACAA-TTGCAG-------------CCTGGTCG--------------GG---------TCGCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------CTTT----------CTGT--TTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
droBip1 scf7180000396569:618605-618920 + ATCCTCAGGGACCTGAAGCTGAAGCGGTTCTACTTCATCGACGAGGCGAGGTGAGTTCACAA---------------TATGCGTTGCGTACCGTTTC-CTGTCTGTCCCAAT---------------------CATCCAGCTGTCCGTCCAGGTGATGGAGACAGAGTCGGAGACGGAGACGGAGACACCTTC---------AAAAATCCCA-ATACAC---------------------------------C----------------------------------------------------------------ACACAA-TTGCAG-------------CCTGGTCG--------------GG---------TCGCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT------GTTGCTGT-------TGTTGTGGCTGTTGGTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
dp5 XR_group6:13088004-13088301 + ATCCTGCGGGACCTCAAATTGAAGCGTTTCTATTTCATCGACGAAGCCAGGTAAGGGCA------------------------------ACCCTTCCCCCCTCTTGCCCAATGTCGTGTTGCTCCAACCCTATTATCTCTCTGGC-------------------------------------AAGACACCTTC---------AAAT-----------------------TTAAGCGCC-ACC---------A--TTT-GCTG--------------------------------------------GCTTTGTATAG-----A-TGGGATG--------GGGG----GCTGCATGTGCTGCT---CGGCGGCGGCAGCGGCTTATTTTGCAATTCGATGA----AAACTCGTTATGCGCCGC---GAGAGCTTGTTG-------GT---------------GTT---------------------GGTTGTGGTGCCACAATTGTTGCTCTCGTTATTGGCCCAT
droPer2 scaffold_88:114027-114324 + ATCCTGCGGGACCTCAAATTGAAGCGTTTCTATTTCATCGACGAAGCCAGGTGAGGGCA------------------------------ACCCTTCCCCCCTCTTGCCCAATGTCGTGTTGCTCCAACCCTATTATCTCTCTGGC-------------------------------------AAGACACCTTC---------AAAT-----------------------TTAAGCGCC-ACC---------A--TTT-GCTG--------------------------------------------GCTGTGTATGG-----A-TGGGATG--------GGGG----GCTGCATGTGCTGCT---CGGCGGCGGCAGCGGCTTATTTTGCAATTCGATGA----AAACTCGTTATGCGCCGC---GAGAGCTTGTTG-------GT---------------GTT---------------------GGTTGTGGTGCCACAATTGTTGCTCTCGTTATTGGCCCAT
droWil2 scf2_1100000004511:2961871-2962109 + AG-------------------------------------------AACAGG------------------------------------------TTTG-CCGTCTGTCC---T---------------------C-----------------------------------AG------AGA--GGAACACCTTC---------AAAAT----------------------GTAAGCGCC-ACCAAGC---ACA--TAT-A-----------------TAC----------ACACAC----------------ACACACGCTCAACCTGCATA--------T----------------G--T----------------TAAGATTATTTTGCAATTGGATAAAAAAAAACTCGTTATGAGC-AATGCGAGAGCTTTTTTCATACCCGTGGCTGTATCTCTGT-------GTATGTGTGTGT--GTGTGTTGGTAGTGCCACAATTGTTGCTCTTGTTATTGGCCCAT
droVir3 scaffold_13049:13620218-13620361 - C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-C---------A--TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTGCA-----------------------TATCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-AA---CAGTTGTTGTTT-------TT------TTTTGTTTTGCTT--------GTGTGT--TGGTGTTATTGGTGCCACAATTGTTGCTCTTGTTATTGGCCGAC
droMoj3 scaffold_6680:13720283-13720455 + -------------------------------------------------------------------------------------------------------------------------------------------------------GGC------------------------------AACACC--------------AACACTCACACACACACATTCACACCT---CGCACA-C---------A--TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTGCA-----------------------TATCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-AA---CAGTTGTTGTTT-------TT-----------------TT--------GTGTGT--TGGTGTTATTGGTGCCACAATTGTTGCTCTTGTTATTGGCCGAC
droGri2 scaffold_15110:15609882-15610040 + AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAACACAC------------A-C---------A--TTT-GGTCG-------------CCT----------------------------CT--GT------------------------------ACTGGTTGCA-----------------------TATCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-AA---CAGTTGTTTTTT-------TT------TTCGTTTT-------TTTTTTGTGTGT--TGGTGTTATTGGTGCCACAATTGTTGCTCTTGTTATTGGCCGAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------GAAAAACCCATATACACCAATATACGCC---------A-C---------A--TAT-G-------------------------------------CCT-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................ACTTCATCGACGAGGCCAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTTGTTT-------GT---------------GGTC----------------GTGTGTTG....................................2411.00100010000000000000
..............................TACTTCATCGACGAGGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.............................CTACTTCATCGACGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.............................CTACTTCATCGACGAGGCCAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..........................GTTCTACTTCATCGACGAGGCCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATGG----AAACTCGTTATGAGC-GA---GAG.................................................................................................2411.00100000000001000000
.....................AAGCGGTTCTACTTCATCGACGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.............................CTACTTCATCGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000010000000000
...........................................................................................................................................................................................ACCTTC---------GAAAAACCGC.........................................................................................................................................................................................................................................................................................................................16200.15300000000003000000
droSec2
ATCCTCAGGGACCTCAAGCTCAAGCGCTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------GAAAAACCCATATACACCAATATACGCC---------A-C---------A--TAT-G-------------------------------------CCT-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......GGGACCTCAAGCTCAAGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................CTTCTACTTCATCGACGAGGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................ATTTTGCAATTCGATGG----AAACT....................................................................................................................2211.0010100
.........GACCTCAAGCTCAAGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------GAAAAACCCATATACACCAATATACGCC---------A-C---------A--TAT-G-------------------------------------CCT-------GACTTATACCAACTCAA-TTGCATA--------TG--GCT----------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................GC-GA---GAGATCTTGTTT-------GT---------------GGT.............................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000010000000000
..........................GTTCTACTTCATCGACGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000001000000000000000000
.........................GGTTCTACTTCATCGACGAGGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TATACCAACTCAA-TTGCA....................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGAGC-GA---GAGATCTTGTT.........................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAGC-GA---GAGATCTTGTT.........................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................GCAATTCGATGG----AAACTCGTT................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-------GT---------------GGTC----------------GTGTGTTGGTG.................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
......AGGGACCTCAAGCTCAAGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-------GT---------------GGTC----------------GTGTGTTGG...................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................................................................................................................................................................................TC---------GAAAAACCCATATACACC.................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------------GGTC----------------GTGTGTTGGTGGT...............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000
...........................TTCTACTTCATCGACGAGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................ACTTCATCGACGAGGCCAGGTGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CT-------GACTTATACCAACTCA...........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTGTTT-------GT---------------GGTC----------------GTGTG.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................................................................................................................................................................................................AATTCGATGG----AAACTCGTTATGAG...........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.TCCTCAGGGACCTCAAGCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-GA---GAGATCTTGTTT-------GT---------------GGT.............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-------GT---------------GGTC----------------GTGTGTTGGTGG................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GACGAGGCCAGGTGAGTT----------------------------GCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................ACCAACTCAA-TTGCATA--------TG--GC....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTCAAGCGGTTCTACTTCATCGACGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAAT.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CGACGAGGCCAGGTGAGTT----------------------------GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................GCTCAAGCGGTTCTACTTCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------G....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................................................................................................................GT------------------------------GACACCTTC---------GAAAAACCCA.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGGACCTCAAGCTCAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTACTTCATCGACGAGGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................TC---------GAAAAACCCATATACACCAA...............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGTTCTACTTCATCGACGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................TGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACA.................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................GTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GAC..................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGGACCTCAAGCTCAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................CGGTTCTACTTCATCGACGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................CAAGCGGTTCTACTTCATCGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAGGGACCTCAAGCTCAAGCGGTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATACCAACTCAA-TTGCATA--------TG--......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GA---GAGATCTTGTTT-------GT---------------GGTC----------------............................................2011.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGGACCTCAAGCTCAAGCGGTTCTACTTCATCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATA--------TG--GCT----------G--GCT---AG---------TCGGTTT..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGTTATGAGC-GA---GAGATCTTT...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................AGCGGTTCTACTTCATCGACGAGGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TC---------GAAAAACCCATATACA...................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTC........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTGCTCTTGTTATTC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------GT---------------GGTC----------------GTGTGTTGGTGGT...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........ACCTCAAGCTCAAGCGGTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT-------GT---------------GGTC----------------GTGTGTTGGT..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTCAGGGACCTCAAGCTCAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................CGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------G..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................ATTCGATGG----AAACTCGTTATGAGC-.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................CCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCC.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC----------------GTGTGTTGGTGGTGCCA...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCTCAGGGACCTCAAGCTCAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................A---GAGATCTTGTTT-------GT---------------GGTC----------------GT..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CATCGACGAGGCCAGGTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCTCAGGGACCTCAAGCTCAAGCGGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCAAGCGGTTCTACTTCATCGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-GA---GAGATCTTGTTT-------GT---------------GG..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTGTTT-------GT---------------GGTC----------------GTG.........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................TTCTACTTCATCGACGAGGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GA...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-------GT---------------GGTC----------------GTGTGTTGGT..................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATTCGATGG----AAACTCGTTATG.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GATGG----AAACTCGTTATGAG...........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................TACTTCATCGACGAGGCCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGATGG----AAACTCGTTATGAGC-.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGG................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................CGGTTCTACTTCATCGACGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGCTCTTGTTATTGGC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGGACCTCAAGCTCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CTTATACCAACTCAA-TTGCA....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTT-------GT---------------GGTC----------------GTGTGTTGG...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AATTCGATGG----AAACTCGTTATGAGC-G........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GCATA--------TG--GCT----------G--GCT---AG---------TCGGT................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................AGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GA...................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------------GGTC----------------GTGTGTTGGTGGTG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGGGACCTCAAGCTCAAGCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTCATCGACGAGGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ATATACGCC---------A-C---------A--TAT-G-------------------------------------CCT-------GACTT......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTGCAATTCGATGG----AAACTCG..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTCAGGGACCTCAAGCTCAAGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTCAGGGACCTCAAGCTCAAGCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....CAGGGACCTCAAGCTCAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GAA........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTATGAGC-GA---GAGGG...............................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATACACCAATATAAGCC---------A-C---------A--TAT-G-----------------TAT----------AT--GTACCT-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..CCTCAGGGACCTCAAGCTCAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............................TCTACTTCATCGACGAGGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................AAGCGGTTCTACTTCATCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTGGTGGTGCCAC..........................1811.0011000000
.....................................................................................................................................................................................................................................................................................AT----------AT--GTACCT-------GCCTTATACCAACTCAA-T........................................................................................................................................................................................................2811.0010100000
droYak3
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATACACTTATATACTCC---------A-C---------A--TAT-A-------------------------------------CCA-------GCCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCAGTTTATTTTGCAATTCGATGA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....CAGGGACCTCAAGCTCAAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGC-GA---GAGATCTTGTT.........................................................................................2011.00100000010000
..........................GTTCTACTTCATCGACGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
............................TCTACTTCATCGACGAGGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.................GCTCAAGCGGTTCTACTTCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
droEug1
ATCCTCAGGGATCTTAAGCTGAAGCGATTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATACAC---------------------------------C--------A-TA----T-----------------------ATACCA-------ACCGTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotal
No Reads
droBia1
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCG-----------------------------------------------------------TCCAGGT------------------------------GACACCTTC---------AAAAAACCCATATAC-----------------------------------CAGTCGGTCA-TATGTAT---GTATACATATGTACACCC--GTACCC-------ACCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotal
No Reads
droTak1
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GTGC---------------------------------------------------------GTCCAGGT------------------------------GACACCTTACAAAAAAAAAAAAAACCCATATAC-----------------------------------CA-----------TGCAT---ATATACATGTGTATTTAT--GTACCCACCTTATAGCTTATACCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTT----------SizeHit CountTotal NormTotal
No Reads
droEle1
ATCCTCAGGGACCTCAAGCTCAAGCGATTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGTCC-----C-CG----------------------------------------------GTCCCGGT------------------------------GACACCTTC---------AAAAAACCTATATCC----------------------------------A--TAT-GCCA-TA----T---G----------------------TAT-------GCCTTATAGCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GATATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCGCSizeHit CountTotal NormTotal
No Reads
droRho1
ATTCTCAGGGACCTCAAGCTCAAGCGTTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GCGTCC-----C-CA----------------------------------------------GTCCCGGT------------------------------GACACCTTC---------AAAAAACCC--------------------------C-A------TATCCA--TAT-GCCA-TA----T---G----------------------TAT-------ACCTTATATCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGCTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGTC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCGCSizeHit CountTotal NormTotal
No Reads
droFic1
ATCCTCAGGGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCAAGGTGAGTT----------------------------GAGT---------------------------------------------------------GTCCAGGT------------------------------GACACCTTC---------AAAAAAA------------------------ACTCC-A------TATAC-CATAT-GCCA-TA----TTCCG----------------------TAT-------ACCTTGTGCCAACTCAA-TTGCATA--------T----------------G--GCT---AG---------TCGGTTTATTTTGCAATTCGATGG----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------GGCC----------------GTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCGCSizeHit CountTotal NormTotal
No Reads
droKik1
ATCCTGCGAGACCTCAAGCTCAAGCGGTTCTACTTCATCGACGAGGCCAGGTGAGTT----------------------------GTGT--------------------------------------------------------------GGT------------------------------GACACCTTC---------GAAATCCCCCT--ACATCCATATAC-------------------------CAAAA-AGC---------------------------------------------------AACCAGCTCAA-TTGCATACATGTCTCT----------------G--GCTTTTGG---------TCGCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT------ATTT------GCCGTGTGTGCTTGTGT--GAGTTTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCTATSizeHit CountTotal NormTotal
No Reads
droAna3
ATCCTCAGGGACCTGAAGCTCAAGCGGTTCTACTTCATCGACGAGGCGAGGTGAGTTTTCAAAAAAAAAAAAAAAAAAATGCATTGCGTAGCGTTTC-CTGTCTGTCCCAAT---------------------CATCCAGCAG-CTGTCCAGGTGATG----------------TGGAGACGGAGACACCTTC---------AAAAAATCCCAATACAC---------------------------------C----------------------------------------------------------------ACACAA-TTGCAG-------------CCTGGTCG--------------GG---------TCGCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT---------------CTTT----------CTGT--TTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................GTTCTACTTCATCGACGAGGCGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
.............................CTACTTCATCGACGAGGCGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGCCACAATTGTTGCTCTTGTC..........2811.001010000
.......................................................................................................TGTCCCAAT---------------------CATCCAGCAG-CTGTCCAGG....................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
......................................................................................................................................................AGGTGATG----------------TGGAGACGGAGAC..................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGGTGCCACAATT......................1811.001010000
droBip1
ATCCTCAGGGACCTGAAGCTGAAGCGGTTCTACTTCATCGACGAGGCGAGGTGAGTTCACAA---------------TATGCGTTGCGTACCGTTTC-CTGTCTGTCCCAAT---------------------CATCCAGCTGTCCGTCCAGGTGATGGAGACAGAGTCGGAGACGGAGACGGAGACACCTTC---------AAAAATCCCA-ATACAC---------------------------------C----------------------------------------------------------------ACACAA-TTGCAG-------------CCTGGTCG--------------GG---------TCGCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-GA---GAGATCTTGTTT-------GT------GTTGCTGT-------TGTTGTGGCTGTTGGTGTGTTGGTGGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotal
No Reads
dp5
ATCCTGCGGGACCTCAAATTGAAGCGTTTCTATTTCATCGACGAAGCCAGGTAAGGGCA------------------------------ACCCTTCCCCCCTCTTGCCCAATGTCGTGTTGCTCCAACCCTATTATCTCTCTGGC-------------------------------------AAGACACCTTC---------AAAT-----------------------TTAAGCGCC-ACC---------A--TTT-GCTG--------------------------------------------GCTTTGTATAG-----A-TGGGATG--------GGGG----GCTGCATGTGCTGCT---CGGCGGCGGCAGCGGCTTATTTTGCAATTCGATGA----AAACTCGTTATGCGCCGC---GAGAGCTTGTTG-------GT---------------GTT---------------------GGTTGTGGTGCCACAATTGTTGCTCTCGTTATTGGCCCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGCTCTCGTTATTGG.....2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................G----GCTGCATGTGCTGCT---CGGCG...........................................................................................................................................................2111.0010100000000
.................................................................................................................................CTATTATCTCTCTGGC-------------------------------------AAGAC..................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................CATGTGCTGCT---CGGCGGCGGC......................................................................................................................................................2111.0010100000000
.........................GTTTCTATTTCATCGACGAAGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCTTGTTG-------GT---------------GTT---------------------GGTTGTGGTGC.............................2811.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGTTATGCGCCGC---GAGAGCTT............................................................................................2111.0010100000000
.....GCGGGACCTCAAATTGAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-------GT---------------GTT---------------------GGTTGTGGTGCCACC.........................2311.0010100000000
droPer2
ATCCTGCGGGACCTCAAATTGAAGCGTTTCTATTTCATCGACGAAGCCAGGTGAGGGCA------------------------------ACCCTTCCCCCCTCTTGCCCAATGTCGTGTTGCTCCAACCCTATTATCTCTCTGGC-------------------------------------AAGACACCTTC---------AAAT-----------------------TTAAGCGCC-ACC---------A--TTT-GCTG--------------------------------------------GCTGTGTATGG-----A-TGGGATG--------GGGG----GCTGCATGTGCTGCT---CGGCGGCGGCAGCGGCTTATTTTGCAATTCGATGA----AAACTCGTTATGCGCCGC---GAGAGCTTGTTG-------GT---------------GTT---------------------GGTTGTGGTGCCACAATTGTTGCTCTCGTTATTGGCCCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................GTCGTGTTGCTCCAACCCTATT.......................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGCTCTCGTTATTGGCC...2211.001100000
.........................GTTTCTATTTCATCGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................CAATGTCGTGTTGCTCCAACCCTATT.......................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................GTTTCTATTTCATCGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
AG-------------------------------------------AACAGG------------------------------------------TTTG-CCGTCTGTCC---T---------------------C-----------------------------------AG------AGA--GGAACACCTTC---------AAAAT----------------------GTAAGCGCC-ACCAAGC---ACA--TAT-A-----------------TAC----------ACACAC----------------ACACACGCTCAACCTGCATA--------T----------------G--T----------------TAAGATTATTTTGCAATTGGATAAAAAAAAACTCGTTATGAGC-AATGCGAGAGCTTTTTTCATACCCGTGGCTGTATCTCTGT-------GTATGTGTGTGT--GTGTGTTGGTAGTGCCACAATTGTTGCTCTTGTTATTGGCCCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGT-------GTATGTGTGTGT--GT..........................................2212.00200200
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACCCGTGGCTGTATCTCT...................................................................2111.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGT-------GTATGTGTGTGT--GTGT........................................2411.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGT-------GTATGTGTGTGT--G...........................................2130.33100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTGT-------GTATGTGTG.................................................1940.25100010
droVir3
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-C---------A--TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTGCA-----------------------TATCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-AA---CAGTTGTTGTTT-------TT------TTTTGTTTTGCTT--------GTGTGT--TGGTGTTATTGGTGCCACAATTGTTGCTCTTGTTATTGGCCGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGCTT--------GTGTGT--TGGTGT......................................2112.002001000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CA-----------------------TATCTTTATTTTGCAATTCGAT...............................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCTT--------GTGTGT--TGGTGTTATT..................................2411.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTTGCTT--------GTGTGT--TGG.........................................2011.001000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGTTATGAGC-AA---CAGTTGTC............................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTGC.............................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTGCTT--------GTGTGT--TGGTG.......................................2111.001000000000000000000000000000000000000000100000000000000000000000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------GGC------------------------------AACACC--------------AACACTCACACACACACATTCACACCT---CGCACA-C---------A--TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTGCA-----------------------TATCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-AA---CAGTTGTTGTTT-------TT-----------------TT--------GTGTGT--TGGTGTTATTGGTGCCACAATTGTTGCTCTTGTTATTGGCCGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................CACATTCACACCT---CGCACA-C---------A--TTT-G..........................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................................CA-C---------A--TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTGC.............................................................................................................................................................................2511.001000001
.............................................................................................................................................................................................................................................ACA-C---------A--TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTG..............................................................................................................................................................................2511.001100000
................................................................................................................................................................................................................................CACACCT---CGCACA-C---------A--TTT-GC.........................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................................................TTT-GCTC--------------------------------------------GCT--GT------------------------------ACTGGTTGC.............................................................................................................................................................................2111.001000001
droGri2
AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAACACAC------------A-C---------A--TTT-GGTCG-------------CCT----------------------------CT--GT------------------------------ACTGGTTGCA-----------------------TATCTTTATTTTGCAATTCGATAA----AAACTCGTTATGAGC-AA---CAGTTGTTTTTT-------TT------TTCGTTTT-------TTTTTTGTGTGT--TGGTGTTATTGGTGCCACAATTGTTGCTCTTGTTATTGGCCGACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:00 AM