dsi_10791

TCTCGGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGAAGGTAAATTCCTTTGTTCATTTCCACCCCCCATGCTGACGTGACAAGAAAATTGCATTTTCCCGTATTCCATCCGACAGGTGGGTCGCAATTTCGATGCATCCGTAACGGAGGGACATATCCGCCGCCT ************************************************((((.(((..(((.((((.((.............)).))))))))))..))))........................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M053 female body	GSM343915 embryo	M025 embryo	M024 male body	O002 Head	SRR553486 Makindu_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries
........................................................................................................................................AATTTCGATGCATCCGTAACGGAGGGAC.............	28	0	1	2.00	2	0	0	0	2	0	0	0	0
........GAGTTCATCGAGGTGGTGCGCAGT.................................................................................................................................................	24	0	1	1.00	1	0	1	0	0	0	0	0	0
....................................................................................................................................................TCCGTAACGGAGGGACATA..........	19	0	1	1.00	1	0	0	1	0	0	0	0	0
..................................................................................................................................GGTCGCAATTTCGATGCATC...........................	20	0	1	1.00	1	1	0	0	0	0	0	0	0
..................................GGCCAAAACCTGGAAGGTG............................................................................................................................	19	1	1	1.00	1	1	0	0	0	0	0	0	0
.....................................................................................................................................CGCAATTTCGATGCATCCGTAACGG...................	25	0	1	1.00	1	1	0	0	0	0	0	0	0
........................................................................................................................................AATTTCGATGCATCCGTAACGGAGG................	25	0	1	1.00	1	1	0	0	0	0	0	0	0
...................................................................................................................................GTCGCAATTTCGATGCATCCGTAACG....................	26	0	1	1.00	1	0	0	0	0	1	0	0	0
.........AGTTCATCGAGGTGGTGCG.....................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0	0
...........................GCAGTAAGGCCAAAACCTGGAAGGTG............................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0	0	0
......................................................................................................................................GCAATTTCGATGCATCCGTAACGGA..................	25	0	1	1.00	1	1	0	0	0	0	0	0	0
.......TGAGTTCATCGAGGTGGTGCGC....................................................................................................................................................	22	0	1	1.00	1	0	1	0	0	0	0	0	0
..............................GTAAGGCCAAAACCTGGAAGGT.............................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0	0
.......................................................................................................................................CAATTTCGATGCATCCGTAACGGA..................	24	0	1	1.00	1	1	0	0	0	0	0	0	0
........GAGTTCATCGAGGTGGTGCGCA...................................................................................................................................................	22	0	1	1.00	1	0	1	0	0	0	0	0	0
.................................AGGCCAAAACCTGGAAGGTG............................................................................................................................	20	1	1	1.00	1	1	0	0	0	0	0	0	0
..............................GTAAGGCCAAAACCTGGAAGGTGGGT.........................................................................................................................	26	3	1	1.00	1	0	0	1	0	0	0	0	0
..................................................................................................................................GGTCGCAATTTCGATGCATCCGTAACGGA..................	29	0	1	1.00	1	1	0	0	0	0	0	0	0
.....................................................................................................................................CGCAATTTCGATGCATCCGT........................	20	0	1	1.00	1	1	0	0	0	0	0	0	0
........................................................................................................................................AATTTCGATGCATCCGTAAC.....................	20	0	1	1.00	1	1	0	0	0	0	0	0	0
................................AAGGCCAAAACCTGGAAGGT.............................................................................................................................	20	0	1	1.00	1	0	0	0	0	1	0	0	0
.........................................................................................................................TGGAAGGTGGGTCGCAATTTCGATGCA.............................	27	3	1	1.00	1	0	0	0	0	0	1	0	0
...........................GCAGTAAGGCCAAAACCTGGAAGGT.............................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0	0	0
............................................................................................................................................TCGATGCATCCGTAACGGAGGGAC.............	24	0	1	1.00	1	0	0	1	0	0	0	0	0
....................................................AAATTCCTTTGATCGTTTACA........................................................................................................	21	3	7	0.14	1	0	1	0	0	0	0	0	0
.................................................................................................................................GGGTCGCAAGTTCGA.................................	15	1	15	0.07	1	0	0	0	0	0	0	1	0
...............................................................................................................................................GTGCATCCGTAGCGGAGGT...............	19	3	18	0.06	1	0	0	0	0	0	0	0	1

AGAGCCTACTCAAGTAGCTCCACCACGCGTCATTCCGGTTTTGGACCTTCCATTTAAGGAAACAAGTAAAGGTGGGGGGTACGACTGCACTGTTCTTTTAACGTAAAAGGGCATAAGGTAGGCTGTCCACCCAGCGTTAAAGCTACGTAGGCATTGCCTCCCTGTATAGGCGGCGGA ************************************************((((.(((..(((.((((.((.............)).))))))))))..))))........................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries
...............................................TTCCATGCAAGGAAACAAGT..............................................................................................................	20	2	1	1.00	1	0	1	0	0	0
.............................................................................GGTACGACTGCTCTGT....................................................................................	16	1	1	1.00	1	1	0	0	0	0
.............................................................................GGTACGACTGAACTGT....................................................................................	16	1	3	0.33	1	0	0	1	0	0
.................................................................................CGACTGCACTGTTATTTG..............................................................................	18	2	5	0.20	1	0	0	1	0	0
.............................................................................GGTACGACTGCTCTGTCCGT................................................................................	20	3	5	0.20	1	1	0	0	0	0
........................................................................................................AAATGGGCATAAGGT..........................................................	15	1	15	0.13	2	0	0	0	2	0
...............................................................ACGCAACGGTGGGGGGTAC...............................................................................................	19	3	17	0.12	2	0	2	0	0	0
..AGCCTACTCAAGTTG................................................................................................................................................................	15	1	10	0.10	1	1	0	0	0	0
.......................................................................................................................AGGCTGTCCTACCAACGTT.......................................	19	3	15	0.07	1	1	0	0	0	0
............................................................................................................GGGCAAACGGTAGGCTG....................................................	17	2	20	0.05	1	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	node_24415:60359-60535 +	dsi_10791	TCTCGGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGAAGGTAAA------------------------------------TTCCTTTGTTCA-----------------------------------------------TTT---CCACC----CCCCATGCTGACGTGACA--AGA----AAATTGCATTT--TCCCGTA----T------TCCATCCG-ACAGGTGGGTCGCAATTTCGATGCATCCGTAACGGAGGGACATATCCGCCGCCT
droSec2	scaffold_20:314344-314516 -		TCTCGGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGAAGGTAAA------------------------------------TTCCTTTG-------------------------------------------------TTT-----CCACC----TTCCATGCTGACGTGACA--AGA----AAATTACATTT--TCCCGTA----T------TCTATCTG-ACAGGTGGGTCGCAATTTCGATGCATCCGTAACGGAGGGACATATCCGCCGCCT
dm3	chrX:13675717-13675892 -		TCTCGGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAAA------------------------------------TTCCTTTG-------------------------------------------------TTT-----CCAACCCT-TTTCTTGCTGACGTGACA--AGA----AAATTGCATTT--TCCCGTT----T------CCTATCCG-CCAGGTGGGTCGCAATTTCGATGCATCCGTAACGGAGGGACATATTCGCCGCCT
droEre2	scaffold_4690:13208792-13208976 +		TCTCGGATGAGTTCATCGAGTTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAAT-------------------------------------TCCTTTGTTAAT-------------------------------------TACTTTGTTTTTCCTC--------CCACCTGCTGACGTGACA--AGA----AAATTACATTT--TGCCGTA----T------TTTATCCG-CCAGGTGGGTCGCAATTTCGATTCATCCGTAACGGAAGGATACATCCGCCGCCT
droYak3	X:7968288-7968466 -		TCTCGGATGAGTTCATCGAGTTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAA-------------------------------------TTTCTTTG-------------------------------------------------TTTTC------------CCCCCTGCTGACGTGACA--AGA----AAATTGAATTT--TTCCATATTCTATTCTATTCTATCCG-CCAGGTGGGTCGTAATTTCGATGCATCCGTAACGGAGGGACACATCCGCCGCCT
droEug1	scf7180000409008:97718-97898 -		TGTCAGAGGAGTTCATTGATTTGGTGCGCAGTAAGGCCAAAACCTGGAAGGTAAGA-----TTCCAATA-------G----------A---TTCCTTTG-------------------------------------------------TTTTT---CTGCC----CGTTCTGCTGACGTGACA----------AATTGAATTT--T-CCGTA----A------TCTATCCG-ACAGGTGGGACGTAATTTCGATGAATCCGTGACAGAGGATCATATTCGCCGTCT
droBia1	scf7180000302041:705423-705613 -		TATCCGATGAGTTCATCGAGCTGGTGCGCAGTAAGGCCAAGACCTGGACGGTGAGC-----TAT---ACTCCCAC-A----------T---TTCCTTTG-------------------------------------------------TTTTC-----CCCACTGTTCTGTGCTGACGTGACA--AGT----TAATTGCATTT--T-CCGTA----C------TCTCTCCACCCAGGTTGGCCGTAATTTCGATGCATCCGTGACGGAGGACCACATCCGCCGCCT
droTak1	scf7180000414562:479441-479621 +		TATCCGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAAGCGAGATTATCAA------------------------TTCCTTTG-------------------------------------------------TTTTC-------------CCCCTGCTGACGTGACA--AGA----AAATTGCATTT--T-CCGTA----C------TCTAACCACCCAGGTTGGACGCAATTTCGATGCCTCCGTGACGGAGGAGCACATCCGCCGCCT
droEle1	scf7180000491044:32652-32836 +		TCTCCGATGAGTTCATCGAGGTGGTGCGCAGCAAGGCAAAAACCTGGCAGGTAAGC-----GGCAACT-------------------T---CTCCTTTG---------------TTT------------------------TCCTTTGTTT---------------TCCCTGCTGACGTGACA--AGA----AAATTGCATTT--T-CCGTA----C------TCTTTCCG-CCAGGTGGGACGTAATTTCGATAAATCCGTAACGGAGGATCACATTCGTCGCCT
droRho1	scf7180000777352:12083-12266 +		TCTCGGATGAGTTCATCGAGGTGGTGCGCAGCAAGGCAAAAACCTGGCAGGTAAGC-----AAACCAAC-----------------------A---------------CCTACATAT------------------------TCCTTTGTTGTT---------------CCAGCTGACGTGACA--GGA----AAATTGCATTT--T-CCGTA----A------TCTATTCA-CCAGGTGGGCCGTAATTTCGATGAATCCGTGACGGAGGAGCACATCCGTCGCCT
droFic1	scf7180000454073:1291746-1291918 +		TGTCCGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGCAGGTAAAC-----CA--AA------------------------TTCCTTTG-------------------------------------------------TTTTT--------------CCCTGCTGACGTGACA--AGT--A-TAATTGCATTT--T-CCGTA----T------TCTATCCG-CCAGGTGGGCCGTAATTTCGATGAGTTCGTGACCGAGGATCACATCCGTCGCCT
droKik1	scf7180000302344:237075-237174 -		TGTCGGACGAATTTATTGAGCTGGTGCGCAGCAAGGCCAAGACCTGGACGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGCCGTAACTTCGACAAGTCGGTGAGCGAGGAGCATATCCGCGGCCT
droAna3	scaffold_13248:1840173-1840226 -		TGTCCGACGAATTTATTGAGTTGGTCAAAACCAAGACCAGAACATGGCAGGTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1	scf7180000395544:21327-21391 +		TGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTA-ACAGGCTGGACGTAATTTTGATGAAGACGTCTCGGAGGAGTACATCCGTGGCCT
dp5	XL_group1e:1323701-1323870 -		TATCCGATGAATTCATCGAGCTGGTGCGCAGCAAGGCATCAACCTGGCAGGTAAGA-----CGCAAAAC-----------------------G---------------CCAGATTTT------------------------------------------------T-CCTTTGTGACGTGTGGCAC--TAGTAA-----------TCGTGTT----A------TTTACCCT-ACAGGTTGGCCGTAATTTTAAAGAATCCGTGTCGGAGGAGTACATCCGAGGCCT
droPer2	scaffold_18:170992-171161 -		TATCCGATGAATTCATCGAGCTGGTGCGCAGCAAGGCATCAACCTGGCAGGTAAGA-----CGCAAAAC-----------------------G---------------CCAGATTTT------------------------------------------------T-CCTTTGTGACGTGTGGCAC--TAGTAA-----------TCGTGTT----A------TTTACCCT-ACAGGTTGGCCGTAATTTTAAAGAATCCGTGTCGGAGGAGTACATCCGAGGCCT
droWil2	scf2_1100000004590:1150718-1150896 +		TGTCGGATGAGTTTATTGAGTTGGTCCGCGGAAAAGCAAATACTTGGACTGTAAGC-----TCA-AAAC------GAATTAGCTGCAACTGC---CTCTATAAC-------------------------------------TAGTTTACTTTATTCCC--------AAATTGGTG------------------------------------A----T------CCTTTCTT-GCAGGTTGGCCGAAATTTCCATGAATCTGTGTCAGAGAAATATATACGGGGCCT
droVir3	scaffold_12970:5215067-5215256 +	dvi_13168	TTAGCGAAGAATTTATGGAGCTGGTGCGAGGCAAGGCCAAGACATGGACGGTAAGT-----GTCAA-------------------------TATTATTATTTATTAAGCCAACTAAA------------------------------------------------CCTTCTGCTGACGTGACA--TAA----TAATATAATATAAT-TGACA----T------TTTAAATA-ACAGGTTGGCCGCAATTTTGATGCATCCGTATCGGAACACCATATACGCGGCCT
droMoj3	scaffold_6473:4781471-4781635 +		TAAGTGATGAATTCATAGAGCTGGTGCGCAGCAAAGCAAAGACATGGACGGTAAGC-----TATTAA------------------------TATTATTA-------------------------------------------------TTAT-------------GATTATGATGACGTGACA--T----------------T--T-CCATTGT--T------TATTTCCA-TTAGCCTGGTCGCAACTTTGATGCATCTGTATCAGAGGGACATATACGCGGCCT
droGri2	scaffold_15081:132292-132479 -		TTAGCGATGAATTCATTGAGTTGGTAAAAAGCAAGGCCACAACCTGGACGGTAAGT-----CAAT--------------ATGATGACCATGA---CTATCA-------CATACATATATATATATATATTTATACAAATATATTTCTGTTTT----------------------------------------------------------TA----T------TGTTAATC-GCAGCCTGGACGCAACTTTGATGCGGCCGTGTCGGAGCATCATATACGTGCCCT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

TCTCGGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGAAGGTAAA------------------------------------TTCCTTTGTTCA-----------------------------------------------TTT---CCACC----CCCCATGCTGACGTGACA--AGA----AAATTGCATTT--TCCCGTA----T------TCCATCCG-ACAGGTGGGTCGCAATTTCGATGCATCCGTAACGGAGGGACATATCCGCCGCCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAACGGAGGGAC.............	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........GAGTTCATCGAGGTGGTGCGCAGT..............................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................TCCGTAACGGAGGGACATA..........	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................GGTCGCAATTTCGATGCATC...........................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................GGCCAAAACCTGGAAGGTG.........................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATGCATCCGTAACGG...................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAACGGAGG................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GTCGCAATTTCGATGCATCCGTAACG....................	26	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.........AGTTCATCGAGGTGGTGCG..................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................GCAGTAAGGCCAAAACCTGGAAGGTG.........................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GCAATTTCGATGCATCCGTAACGGA..................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TGAGTTCATCGAGGTGGTGCGC.................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..............................GTAAGGCCAAAACCTGGAAGGT..........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAATTTCGATGCATCCGTAACGGA..................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
........GAGTTCATCGAGGTGGTGCGCA................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................................AGGCCAAAACCTGGAAGGTG.........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................GGTCGCAATTTCGATGCATCCGTAACGGA..................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATGCATCCGT........................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAAC.....................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................................AAGGCCAAAACCTGGAAGGT..........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...........................GCAGTAAGGCCAAAACCTGGAAGGT..........................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TCGATGCATCCGTAACGGAGGGAC.............	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

TCTCGGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGAAGGTAAA------------------------------------TTCCTTTG-------------------------------------------------TTT-----CCACC----TTCCATGCTGACGTGACA--AGA----AAATTACATTT--TCCCGTA----T------TCTATCTG-ACAGGTGGGTCGCAATTTCGATGCATCCGTAACGGAGGGACATATCCGCCGCCT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
........GAGTTCATCGAGGTGGTGCGC.................................................................................................................................................................................................................................................................	21	1	3.00	3	0	3	0	0
................................AAGGCCAAAACCTGGAAGGTGG........................................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0
.............................AGTAAGGCCAAAACCTGGAAGGTGG........................................................................................................................................................................................................................................	25	1	3.00	3	0	2	1	0
.............................AGTAAGGCCAAAACCTGGAAGGT..........................................................................................................................................................................................................................................	23	1	2.00	2	0	1	1	0
..................................................................................................................................................................................................................................................CGCAATTTCGATGCATCCGTAACGGAGG................	28	1	2.00	2	1	1	0	0
..............................GTAAGGCCAAAACCTGGAAGGT..........................................................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0
..............................GTAAGGCCAAAACCTGGAAGGTGG........................................................................................................................................................................................................................................	24	1	2.00	2	0	1	1	0
......................................................................................................................................................................................................................................................ATTTCGATGCATCCGTAACGGA..................	22	1	2.00	2	0	1	1	0
.....GATGAGTTCATCGAGGTGGTGCG..................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0
.......................................................................................................................................................................................................................................................TTTCGATGCATCCGTAACGGA..................	21	1	1.00	1	0	1	0	0
.............................................................................................................................................................................TGACGTGACA--AGA----AAATTACA......................................................................................	21	1	1.00	1	0	0	0	1
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGACAT...........	24	1	1.00	1	0	1	0	0
..................................................................................................................................................................................................................................ATCTG-ACAGGTGGGTCGC.........................................	18	1	1.00	1	0	0	0	1
....................................................................................................................................................................................................................................................CAATTTCGATGCATCCGTAACGG...................	23	1	1.00	1	0	1	0	0
......ATGAGTTCATCGAGGTGG......................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
................CGAGGTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0
............................................................................................................................................................................................................................................................ATGCATCCGTAACGGAGGGAC.............	21	1	1.00	1	1	0	0	0
...................................................................................................................................................................................................................................................GCAATTTCGATGCATCCGTAACGGAGG................	27	1	1.00	1	1	0	0	0
..................................GGCCAAAACCTGGAAGGTG.........................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0
...........TTCATCGAGGTGGTGCGC.................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................ATTTCGATGCATCCGTAACGGAGGGAC.............	27	1	1.00	1	0	1	0	0
..........................................................................................................................................................................................................................................................CGATGCATCCGTAACGGAGG................	20	1	1.00	1	0	1	0	0
................................AAGGCCAAAACCTGGAAGGT..........................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
......ATGAGTTCATCGAGGTGGT.....................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
.............CATCGAGGTGGTGCGCAGTAAGGCCA.......................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
.....GATGAGTTCATCGAGGTGGTGCGC.................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
................................AAGGCCAAAACCTGGAAGGTG.........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
...............................TAAGGCCAAAACCTGGAAGGT..........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
........................................................................................................................................................................................................................................................TTCGATGCATCCGTAACGGA..................	20	1	1.00	1	0	1	0	0
..........................CGCAGTAAGGCCAAAACCTGGAAGGTGG........................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0
.............CATCGAGGTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
......................................................................................................................................................T-----CCACC----TTCCATGCTGACGTGACA--AGA----..............................................................................................	27	1	1.00	1	0	1	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATGCATCCGTAACG....................	24	1	1.00	1	0	0	1	0
.................................AGGCCAAAACCTGGAAGGTGG........................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0
..........................................................................................................................................................................................................................................................CGATGCATCCGTAACGGAGGG...............	21	1	1.00	1	0	1	0	0
...........TTCATCGAGGTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0
..........GTTCATCGAGGTGGTGCGCA................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
...................................GCCAAAACCTGGAAGGTGG........................................................................................................................................................................................................................................	19	3	0.67	2	1	0	0	1
.......TGAGTTCATCGAGGTGGG.....................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	1	0

dm3

TCTCGGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAAA------------------------------------TTCCTTTG-------------------------------------------------TTT-----CCAACCCT-TTTCTTGCTGACGTGACA--AGA----AAATTGCATTT--TCCCGTT----T------CCTATCCG-CCAGGTGGGTCGCAATTTCGATGCATCCGTAACGGAGGGACATATTCGCCGCCT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........GAGTTCATCGAGGTGGTGCGC.................................................................................................................................................................................................................................................................	21	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGAC.............	22	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGA..............	21	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0
..........GTTCATCGAGGTGGTGCGC.................................................................................................................................................................................................................................................................	19	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CGATGCATCCGTAACGGAGGGACAT...........	25	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGACAT...........	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTTCGATGCATCCGTAACGGAGGGA..............	25	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TCGATGCATCCGTAACGGAGGGAC.............	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
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.......................................................................................................................................................................................................................................................................ACGGAGGGACATATTCGCCG...	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............ATCGAGGTGGTGCGCAGTAAGGCC........................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAACGGA..................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................AGGCCAAAACCTGGACGGT..........................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGACA............	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................AAGGCCAAAACCTGGACGGTGGG------------------------------------...................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................AAAACCTGGACGGTAAA------------------------------------CA.................................................................................................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

TCTCGGATGAGTTCATCGAGTTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAAT-------------------------------------TCCTTTGTTAAT-------------------------------------TACTTTGTTTTTCCTC--------CCACCTGCTGACGTGACA--AGA----AAATTACATTT--TGCCGTA----T------TTTATCCG-CCAGGTGGGTCGCAATTTCGATTCATCCGTAACGGAAGGATACATCCGCCGCCT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........GAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	21	1	22.00	22	2	0	0	0	18	2	0
........GAGTTCATCGAGTTGGTGCGCA................................................................................................................................................................................................................................................................	22	1	10.00	10	2	0	0	0	8	0	0
........GAGTTCATCGAGTTGGTGCGCAGTAAG...........................................................................................................................................................................................................................................................	27	1	7.00	7	0	0	0	0	6	1	0
...........................GCAGTAAGGCCAAAACCTGGACGGTG.........................................................................................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0	0
........GAGTTCATCGAGTTGGTGCGCAGTAAGG..........................................................................................................................................................................................................................................................	28	1	3.00	3	1	0	0	0	2	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATTCATCCGTAACGGA..................	26	1	3.00	3	2	1	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATTCATCCGTAACGGAA.................	27	1	3.00	3	1	0	0	0	2	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATTCATCCGTAACGGAAG................	28	1	2.00	2	2	0	0	0	0	0	0
................CGAGTTGGTGCGCAGTAAG...........................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0	0
.....GATGAGTTCATCGAGTTGGT.....................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	1	1	0
.............................AGTAAGGCCAAAACCTGGACGGTG.........................................................................................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0	0
......ATGAGTTCATCGAGTTGGTG....................................................................................................................................................................................................................................................................	20	1	2.00	2	1	0	0	0	1	0	0
..............................GTAAGGCCAAAACCTGGACGGTG.........................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATTCATCCGTAACGGAAGG...............	29	1	2.00	2	1	0	0	0	1	0	0
........GAGTTCATCGAGTTGGTGCG..................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	2	0
..............ATCGAGTTGGTGCGCAGTAAGG..........................................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TTCGATTCATCCGTAACGGAAG................	22	1	2.00	2	0	0	0	0	2	0	0
.............CATCGAGTTGGTGCGCAGTAAGGCC........................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	2	0	0
.................GAGTTGGTGCGCAGTAAGGCCAAAAC...................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..............ATCGAGTTGGTGCGCAGTAAGGCC........................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
..........GTTCATCGAGTTGGTGCGCA................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
........GAGTTCATCGAGTTGGTGC...................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................CGTAACGGAAGGATACATCCGCCGC..	25	1	1.00	1	0	0	0	0	1	0	0
........GAGTTCATCGAGTTGGTG....................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
...................................GCCAAAACCTGGACGGTG.........................................................................................................................................................................................................................................	18	2	1.00	2	2	0	0	0	0	0	0
.............................................................................................................................................................................................................TGCCGTA----T------TTTATCCG-CCAGGTGGGT............................................	26	1	1.00	1	0	0	0	0	1	0	0
............................CAGTAAGGCCAAAACCTGGACGGTG.........................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...CGGATGAGTTCATCGAGTTGGTGCGCA................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTTCGATTCATCCGTAACGGAAT................	24	1	1.00	1	1	0	0	0	0	0	0
....................TTGGTGCGCAGTAAGGCC........................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATTCATCCGTAAC.....................	23	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTTCGATTCATCCGTAACGG...................	20	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................GTCGCAATTTCGATTCATCCGTAACG....................	26	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GGTGGGTCGCAATTTCGATT...............................	20	1	1.00	1	0	0	0	0	1	0	0
....................TTGGTGCGCAGTAAGGCCAAAACCTG................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATTCATCCGTA.......................	21	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................CGCAATTTCGATTCATCCGTAACG....................	24	1	1.00	1	0	0	0	0	1	0	0
............TCATCGAGTTGGTGCGCAGTAAGGCCA.......................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................TCGCAATTTCGATTCATCCGTA.......................	22	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................CATCCGTAACGGAAGGATACATC........	23	1	1.00	1	1	0	0	0	0	0	0
.................................AGGCCAAAACCTGGACGGTG.........................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTTCGATTCATCCGTAACGGAAGGAT.............	27	1	1.00	1	0	0	0	0	1	0	0
................CGAGTTGGTGCGCAGTAAGG..........................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
....................TTGGTGCGCAGTAAGGCCA.......................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
..........GTTCATCGAGTTGGTGCGCAGTAAGG..........................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................GATTCATCCGTAACGGAAGGA..............	21	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TCATCCGTAACGGAAGGATACATC........	24	1	1.00	1	0	0	0	0	0	1	0
................CGAGTTGGTGCGCAGTAA............................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
.................GAGTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
......ATGAGTTCATCGAGTTGGT.....................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
................CGAGTTGGTGCGCAGTAAGGCCAA......................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
.........................GCGCAGTAAGGCCAAAACCTGGACG............................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.............CATCGAGTTGGTGCGCAGTAA............................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................ATTCATCCGTAACGGAAGG...............	19	1	1.00	1	1	0	0	0	0	0	0
.............CATCGAGTTGGTGCGCAGTAAGG..........................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
........GAGTTCATCGAGTTGGTGCGA.................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0

droYak3

TCTCGGATGAGTTCATCGAGTTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAA-------------------------------------TTTCTTTG-------------------------------------------------TTTTC------------CCCCCTGCTGACGTGACA--AGA----AAATTGAATTT--TTCCATATTCTATTCTATTCTATCCG-CCAGGTGGGTCGTAATTTCGATGCATCCGTAACGGAGGGACACATCCGCCGCCT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
........GAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	21	1	26.00	26	0	2	2	0	0	0	22	0	0	0	0
.....GATGAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	24	1	3.00	3	0	1	1	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................GTAATTTCGATGCATCCGTAACGGAGG................	27	1	3.00	3	0	1	0	1	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGG................	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.............CATCGAGTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
....................................................................................................................................................................................................................................................TAATTTCGATGCATCCGTAACGGAGG................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
........GAGTTCATCGAGTTGGTGCGCA................................................................................................................................................................................................................................................................	22	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................GTAATTTCGATGCATCCGTAACGGAG.................	26	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...............................TAAGGCCAAAACCTGGACGGTGG-------------------------------------...................................................................................................................................................................................................	23	1	2.00	2	0	1	0	1	0	0	0	0	0	0	0
.............CATCGAGTTGGTGCGCAGTAAGGCC........................................................................................................................................................................................................................................................	25	1	2.00	2	0	1	0	0	1	0	0	0	0	0	0
..........................CGCAGTAAGGCCAAAACCTGGAC.............................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................ATCCGTAACGGAGGGACACAT.........	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.............................AGTAAGGCCAAAACCTGGACGGTGG-------------------------------------...................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGTAATTTCGATGCATCCGTAACGGAGG................	28	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGA..............	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................TTTCGATGCATCCGTAACGGAG.................	22	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..............................GTAAGGCCAAAACCTGGACGGTGG-------------------------------------...................................................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
................................AAGGCCAAAACCTGGACGGT..........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...CGGATGAGTTCATCGAGTTGGTGCGCA................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTTCGATGCATCCGTAACGGAGGGA..............	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............CATCGAGTTGGTGCGCAGTAAGG..........................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........GAGTTCATCGAGTTGGTGC...................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....GGATGAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............TCATCGAGTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.......TGAGTTCATCGAGTTGGTGCGCA................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................CGATGCATCCGTAACGGAGG................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................ATCCGTAACGGAGGGACACATC........	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.CTCGGATGAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................ATGCATCCGTAACGGAGGGACAC...........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAAC.....................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTTCGATGCATCCGTAACGGAGGGA..............	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......ATGAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGG...............	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................CGAGTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......TGAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................GTAATTTCGATGCATCCGTAACGGAGGGA..............	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................GAGTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...CGGATGAGTTCATCGAGTTGGTGCG..................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...CGGATGAGTTCATCGAGTTGGT.....................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....GATGAGTTCATCGAGTTGGTGCG..................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
...............................TAAGGCCAAAACCTGGACG............................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGAC.............	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAACGGAG.................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................GTGGGTCGTAATTTCGATGC..............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................CGAGTTGGTGCGCAGTAAGGCCA.......................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................AGTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTTCGATGCATCCGTAACGGA..................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............ATCGAGTTGGTGCGCAGTA.............................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....GGATGAGTTCATCGAGTTGGT.....................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........GTTCATCGAGTTGGTGCGCA................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAACGGA..................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................CTATTCTATCCG-CCAGGTGGGT............................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................GGTGGGTCGTAATTTCGATGC..............................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........GAGTTCATCGAGTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...CGGATGAGTTCATCGAGTTGGTGCGC.................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTCGATGCATCCGTAACGGAGGGA..............	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGACACA..........	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TTCGATGCATCCGTAACGGAGGGACACA..........	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTAACGGAGGGACA............	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................GTTGGTGCGCAGTAAGGC.........................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....GATGAGTTCATCGAGTTGGT.....................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

TGTCAGAGGAGTTCATTGATTTGGTGCGCAGTAAGGCCAAAACCTGGAAGGTAAGA-----TTCCAATA-------G----------A---TTCCTTTG-------------------------------------------------TTTTT---CTGCC----CGTTCTGCTGACGTGACA----------AATTGAATTT--T-CCGTA----A------TCTATCCG-ACAGGTGGGACGTAATTTCGATGAATCCGTGACAGAGGATCATATTCGCCGTCT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TATCCGATGAGTTCATCGAGCTGGTGCGCAGTAAGGCCAAGACCTGGACGGTGAGC-----TAT---ACTCCCAC-A----------T---TTCCTTTG-------------------------------------------------TTTTC-----CCCACTGTTCTGTGCTGACGTGACA--AGT----TAATTGCATTT--T-CCGTA----C------TCTCTCCACCCAGGTTGGCCGTAATTTCGATGCATCCGTGACGGAGGACCACATCCGCCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TATCCGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGACGGTAAGCGAGATTATCAA------------------------TTCCTTTG-------------------------------------------------TTTTC-------------CCCCTGCTGACGTGACA--AGA----AAATTGCATTT--T-CCGTA----C------TCTAACCACCCAGGTTGGACGCAATTTCGATGCCTCCGTGACGGAGGAGCACATCCGCCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TCTCCGATGAGTTCATCGAGGTGGTGCGCAGCAAGGCAAAAACCTGGCAGGTAAGC-----GGCAACT-------------------T---CTCCTTTG---------------TTT------------------------TCCTTTGTTT---------------TCCCTGCTGACGTGACA--AGA----AAATTGCATTT--T-CCGTA----C------TCTTTCCG-CCAGGTGGGACGTAATTTCGATAAATCCGTAACGGAGGATCACATTCGTCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TCTCGGATGAGTTCATCGAGGTGGTGCGCAGCAAGGCAAAAACCTGGCAGGTAAGC-----AAACCAAC-----------------------A---------------CCTACATAT------------------------TCCTTTGTTGTT---------------CCAGCTGACGTGACA--GGA----AAATTGCATTT--T-CCGTA----A------TCTATTCA-CCAGGTGGGCCGTAATTTCGATGAATCCGTGACGGAGGAGCACATCCGTCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGTCCGATGAGTTCATCGAGGTGGTGCGCAGTAAGGCCAAAACCTGGCAGGTAAAC-----CA--AA------------------------TTCCTTTG-------------------------------------------------TTTTT--------------CCCTGCTGACGTGACA--AGT--A-TAATTGCATTT--T-CCGTA----T------TCTATCCG-CCAGGTGGGCCGTAATTTCGATGAGTTCGTGACCGAGGATCACATCCGTCGCCT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TGTCGGACGAATTTATTGAGCTGGTGCGCAGCAAGGCCAAGACCTGGACGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGCCGTAACTTCGACAAGTCGGTGAGCGAGGAGCATATCCGCGGCCT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TGTCCGACGAATTTATTGAGTTGGTCAAAACCAAGACCAGAACATGGCAGGTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.....GACGAATTTATTGAGTTGGT.....................................................................................................................................................................................................................................................................	20	1	5.00	5	0	1	0	0	3	1
.............TATTGAGTTGGTCAAAACCAAGACCA.......................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	2
.......CGAATTTATTGAGTTGGTC....................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	2	0
........GAATTTATTGAGTTGGT.....................................................................................................................................................................................................................................................................	17	1	1.00	1	0	0	0	1	0	0
.......CGAATTTATTGAGTTGGTCA...................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
.........................CAAAACCAAGACCAGAACATGGCA.............................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.............................ACCAAGACCAGAACATGGC..............................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
..........ATTTATTGAGTTGGTCAA..................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0
............................AACCAAGACCAGAACATGGCA.............................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
......ACGAATTTATTGAGTTGGT.....................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0
.......................GTCAAAACCAAGACCAGAACAT.................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.......CGAATTTATTGAGTTGGTCAAAACC..............................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0

droBip1

TGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTA-ACAGGCTGGACGTAATTTTGATGAAGACGTCTCGGAGGAGTACATCCGTGGCCT	Size	Hit Count	Total Norm	Total
No Reads

dp5

TATCCGATGAATTCATCGAGCTGGTGCGCAGCAAGGCATCAACCTGGCAGGTAAGA-----CGCAAAAC-----------------------G---------------CCAGATTTT------------------------------------------------T-CCTTTGTGACGTGTGGCAC--TAGTAA-----------TCGTGTT----A------TTTACCCT-ACAGGTTGGCCGTAATTTTAAAGAATCCGTGTCGGAGGAGTACATCCGAGGCCT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
........GAATTCATCGAGCTGGTGC...................................................................................................................................................................................................................................................................	19	1	10.00	10	0	10	0	0	0	0	0	0	0	0
........GAATTCATCGAGCTGGTGCGC.................................................................................................................................................................................................................................................................	21	1	6.00	6	0	6	0	0	0	0	0	0	0	0
........GAATTCATCGAGCTGGTG....................................................................................................................................................................................................................................................................	18	1	5.00	5	0	5	0	0	0	0	0	0	0	0
................CGAGCTGGTGCGCAGCAAGGC.........................................................................................................................................................................................................................................................	21	1	4.00	4	0	1	2	0	0	0	1	0	0	0
........GAATTCATCGAGCTGGTGCGCAGCAAG...........................................................................................................................................................................................................................................................	27	1	3.00	3	0	2	0	0	0	0	1	0	0	0
........GAATTCATCGAGCTGGTGCGCA................................................................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GTAATTTTAAAGAATCCGT........................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TTAAAGAATCCGTGTCGGA..................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.ATCCGATGAATTCATCGAGCTGGTG....................................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
........GAATTCATCGAGCTGGTGCGCAGCAA............................................................................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................CGAGCTGGTGCGCAGCAAGG..........................................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........ATTCATCGAGCTGGTGCGCAGCAAGGC.........................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....GATGAATTCATCGAGCTGGTG....................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTTTAAAGAATCCGTGTCGGAGGA...............	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................GAATCCGTGTCGGAGGAGTA............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............CATCGAGCTGGTGCGCAGCAAGG..........................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................AAAGAATCCGTGTCGGAGGAGTACATCC.......	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................ATCCGTGTCGGAGGAGTAC...........	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........AATTCATCGAGCTGGTGCGC.................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................AAGGCATCAACCTGGCAG............................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................ATCCGTGTCGGAGGAGTACATCCG......	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................AGAATCCGTGTCGGAGGAGTA............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........GAATTCATCGAGCTGGTGCGCAGCAAGG..........................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................AGAATCCGTGTCGGAGGAGTACATC........	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................ATTTTAAAGAATCCGTGTCG....................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........TTCATCGAGCTGGTGCGCAGCAAGGCA........................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGTAATTTTAAAGAATCCGTGTCGGA..................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
TATCCGATGAATTCATCGAGCTGG......................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............CATCGAGCTGGTGCGCAGCAAGGC.........................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TAAAGAATCCGTGTCGGAGGA...............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................AATCCGTGTCGGAGGAGTACAT.........	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0
........GAATTCATCGAGCTGGTGCG..................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............ATCGAGCTGGTGCGCAGCAAGGC.........................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........AATTCATCGAGCTGGTGC...................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................TCCGTGTCGGAGGAGTACATCCGAGGCC.	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................GTGTCGGAGGAGTACATCCGAGGCC.	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................AGGCATCAACCTGGCAGG...........................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................AAGAATCCGTGTCGGAGGAGTA............	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................CCGTAATTTTAAAGAATCCGT........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................GAATCCGTGTCGGAGGAGTACATC........	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................ATCCGTGTCGGAGGAGTACATCCGAGG...	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................AAAGAATCCGTGTCGGAGGAGT.............	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.............CATCGAGCTGGTGCGCAGCAAGGCATC......................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......ATGAATTCATCGAGCTGGTGCGCA................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0

droPer2

TATCCGATGAATTCATCGAGCTGGTGCGCAGCAAGGCATCAACCTGGCAGGTAAGA-----CGCAAAAC-----------------------G---------------CCAGATTTT------------------------------------------------T-CCTTTGTGACGTGTGGCAC--TAGTAA-----------TCGTGTT----A------TTTACCCT-ACAGGTTGGCCGTAATTTTAAAGAATCCGTGTCGGAGGAGTACATCCGAGGCCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
........GAATTCATCGAGCTGGTGCGC.................................................................................................................................................................................................................................................................	21	1	3.00	3	0	1	0	0	0	2
.............CATCGAGCTGGTGCGCAGCAA............................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..............ATCGAGCTGGTGCGCAGCAAGG..........................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...........TTCATCGAGCTGGTGCGCAGCA.............................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TTTAAAGAATCCGTGTCGG...................	19	1	1.00	1	0	1	0	0	0	0
TATCCGATGAATTCATCGAGCTGGTG....................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.......TGAATTCATCGAGCTGGTGC...................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.............CATCGAGCTGGTGCGCAGCAAGGC.........................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.............................AGCAAGGCATCAACCTGGCAGGTTG........................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
..........ATTCATCGAGCTGGTGCGCAGCAAGG..........................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................CGGAGGAGTACATCCGAGGCC.	21	1	1.00	1	0	1	0	0	0	0
.....................................ATCAACCTGGCAGGTAAGA-----CG...............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................................CCGTAATTTTAAAGAATCCGTGTCGGA..................	27	1	1.00	1	0	0	0	0	0	1
...........TTCATCGAGCTGGTGCGCAGCAAG...........................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0
TATCCGATGAATTCATCGAGCTGG......................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
........GAATTCATCGAGCTGGTGCGCA................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0

droWil2

TGTCGGATGAGTTTATTGAGTTGGTCCGCGGAAAAGCAAATACTTGGACTGTAAGC-----TCA-AAAC------GAATTAGCTGCAACTGC---CTCTATAAC-------------------------------------TAGTTTACTTTATTCCC--------AAATTGGTG------------------------------------A----T------CCTTTCTT-GCAGGTTGGCCGAAATTTCCATGAATCTGTGTCAGAGAAATATATACGGGGCCT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................GTTGGTCCGCGGAAAAGCAA.......................................................................................................................................................................................................................................................	20	1	5.00	5	1	0	4	0	0
..............ATTGAGTTGGTCCGCGGAAAAGC.........................................................................................................................................................................................................................................................	23	1	4.00	4	0	1	2	0	1
.......................................................................................................................................................................................................................................................................TCAGAGAAATATATACGGGGC..	21	1	3.00	3	0	0	0	0	3
.............TATTGAGTTGGTCCGCGGAAAAGC.........................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	3	0	0
..........GTTTATTGAGTTGGTCCGCGGAAAAGCA........................................................................................................................................................................................................................................................	28	1	3.00	3	0	0	3	0	0
....................TTGGTCCGCGGAAAAGCAAAT.....................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	1	0	2
..........GTTTATTGAGTTGGTCCGCGGAAA............................................................................................................................................................................................................................................................	24	1	2.00	2	0	1	1	0	0
................TGAGTTGGTCCGCGGAAAAGCA........................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	1	0	1
...................................................................................................................................................................................................................................................GAAATTTCCATGAATCTGTGTC.....................	22	1	2.00	2	2	0	0	0	0
..........GTTTATTGAGTTGGTCCGCGGAAAA...........................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	2	0	0
.....GATGAGTTTATTGAGTTGGTC....................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	0	1
.....GATGAGTTTATTGAGTTGGTCC...................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	2	0
...............TTGAGTTGGTCCGCGGAAAAGCA........................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0
............................CGGAAAAGCAAATACTTGGAC.............................................................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0
.............TATTGAGTTGGTCCGCGGAAAAGCAAA......................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	1	1
............TTATTGAGTTGGTCCGCGGA..............................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	2	0	0
..............ATTGAGTTGGTCCGCGGAAA............................................................................................................................................................................................................................................................	20	1	2.00	2	0	1	0	1	0
......ATGAGTTTATTGAGTTGGTC....................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	2	0
.................GAGTTGGTCCGCGGAAAAGCAA.......................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	2	0	0
...................GTTGGTCCGCGGAAAAGCA........................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	2	0	0
...............................................................................................................................................................................................................................................................AATCTGTGTCAGAGAAATATATACGGG....	27	1	1.00	1	0	0	1	0	0
..............ATTGAGTTGGTCCGCGGAAAA...........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1
................TGAGTTGGTCCGCGGAAAAGC.........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1
.................GAGTTGGTCCGCGGAAAAGCAAG......................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1
..................AGTTGGTCCGCGGAAAAGCAAAT.....................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1
.............TATTGAGTTGGTCCGCGGA..............................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
....................TTGGTCCGCGGAAAAGCAA.......................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
.....................TGGTCCGCGGAAAAGCAAATACTTGGA..............................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
..................AGTTGGTCCGCGGAAAAGC.........................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0
...............................................................A-AAAC------GAATTAGCTGCAACTG...................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1
....................................................................................................................................................................................................................................................................GTGTCAGAGAAATATATACG......	20	1	1.00	1	0	0	1	0	0
.............................GGAAAAGCAAATACTTGGAC.............................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................ATTGGTG------------------------------------A----T------CCTTTCTT-GCG...................................................	20	1	1.00	1	0	1	0	0	0
.............................................................................ATTAGCTGCAACTGC---CTCTAT.........................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.............TATTGAGTTGGTCCGCGGAAAAGCA........................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
.......TGAGTTTATTGAGTTGGTCCG..................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1
..........................................................................................................................................................................TGGTG------------------------------------A----T------CCTTTCTT-GCAGGT................................................	21	1	1.00	1	0	0	0	0	1
..........GTTTATTGAGTTGGTCCGC.................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
............TTATTGAGTTGGTCCGCGGAAA............................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
..............................GAAAAGCAAATACTTGGACTGTT.........................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
................TGAGTTGGTCCGCGGAAAA...........................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
........................................................................................................................................................................ATTGGTG------------------------------------A----T------CCTTTCTT-GCAGT.................................................	22	1	1.00	1	0	0	0	0	1
............TTATTGAGTTGGTCCGCGGAAAAGCA........................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
.................GAGTTGGTCCGCGGAAAAGCA........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
...............................AAAAGCAAATACTTGGACT............................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0
..................AGTTGGTCCGCGGAAAAG..........................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0
..........GTTTATTGAGTTGGTCCGCGGAAAAGC.........................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................................................................................................ATTTCCATGAATCTGTGTCAGAGAAAT.............	27	1	1.00	1	0	0	1	0	0
..............................GAAAAGCAAATACTTGGA..............................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................TGGCCGAAATTTCCATGAATCTGTGTCA....................	28	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................TCCC--------AAATTGGTG------------------------------------A----T------CCTTTCTT-GCAG..................................................	27	1	1.00	1	0	1	0	0	0
.......TGAGTTTATTGAGTTGGTCCGC.................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................TTTCCATGAATCTGTGTCAGAGAAATATAT.........	30	1	1.00	1	0	0	1	0	0
......................GGTCCGCGGAAAAGCAAATACT..................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
.........AGTTTATTGAGTTGGTCCGCGGAAA............................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
................TGAGTTGGTCCGCGGAAAAGCAAATAC...................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1
.........................CCGCGGAAAAGCAAATACTTG................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
..........GTTTATTGAGTTGGTCCGCGGAAAAG..........................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................GCCGAAATTTCCATGAATCTGTGTCA....................	26	1	1.00	1	0	0	1	0	0
...............TTGAGTTGGTCCGCGGAAAAGCAA.......................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
..........GTTTATTGAGTTGGTCCGCGGAAAAGCAA.......................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0
............TTATTGAGTTGGTCCGCGGAAAAGCAA.......................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
............TTATTGAGTTGGTCCGCGGAAAAGC.........................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
..........GTTTATTGAGTTGGTCCGCGGA..............................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
........GAGTTTATTGAGTTGGTCCGCGGAA.............................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
.........AGTTTATTGAGTTGGTCCGC.................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
...CGGATGAGTTTATTGAGTTGG......................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.............TATTGAGTTGGTCCGCGGAAAAG..........................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
...................GTTGGTCCGCGGAAAAGCAAA......................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1
...........................GCGGAAAAGCAAATACTTGGACTG...........................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0
........GAGTTTATTGAGTTGGTCCGC.................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0
................TGAGTTGGTCCGCGGAAAAGCAAATG....................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1
.........................................................................................................................................................................TTGGTG------------------------------------A----T------CCTTTCTT-GCAGG.................................................	21	1	1.00	1	0	1	0	0	0
.............................GGAAAAGCAAATACTTGGACTGTT.........................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0
......................................AATACTTGGACTGTAAGC-----TCA-.............................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0
...................GTTGGTCCGCGGAAAAGCAAATACT..................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
.......TGAGTTTATTGAGTTGGTC....................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
........GAGTTTATTGAGTTGGTCCG..................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0
...........TTTATTGAGTTGGTCCGC.................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0

droVir3

TTAGCGAAGAATTTATGGAGCTGGTGCGAGGCAAGGCCAAGACATGGACGGTAAGT-----GTCAA-------------------------TATTATTATTTATTAAGCCAACTAAA------------------------------------------------CCTTCTGCTGACGTGACA--TAA----TAATATAATATAAT-TGACA----T------TTTAAATA-ACAGGTTGGCCGCAATTTTGATGCATCCGTATCGGAACACCATATACGCGGCCT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTT........................................................................................................................................................................................	22	1	49.00	49	0	0	6	0	0	0	0	0	0	0	0	0	0	0	3	2	1	3	2	1	0	2	5	0	5	2	4	1	3	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATT.....................................................................................................................................................................................	25	1	16.00	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	0	1	0	0	3	0	1	4	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTAT......................................................................................................................................................................................	24	1	15.00	15	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	1	0	1	5	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATTC....................................................................................................................................................................................	26	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	2	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATC.....................................................................................................................................................................................	25	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................ATAATATAAT-TGACA----T------TTTAAAT........................................................	23	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATTCC...................................................................................................................................................................................	27	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATT.........................................................................................................................................................................................	21	1	4.00	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTC.......................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTTGATGCATCCGTATCGGAAC................	28	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
TTAGCGAAGAATTTATGGAG..........................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................TAAGT-----GTCAA-------------------------TATTATTATTTATTC....................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATCC....................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............TTATGGAGCTGGTGCGAGGCAAGGC.........................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................CAATTTTGATGCATCCGTATCGGAA.................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAAGT-----GTCAA-------------------------TATTATTATTTATTCC...................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTAA......................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........ATTTATGGAGCTGGTGCGAGGCAAGGC.........................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................GCATCCGTATCGGAACACC.............	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TTAGCGAAGAATTTATGGAGCT........................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..AGCGAAGAATTTATGGAGCT........................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GAAGAATTTATGGAGCTGGT.....................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ATTTTGATGCATCCGTATCGGAAC................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........ATTTATGGAGCTGGTGCGA.................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........ATTTATGGAGCTGGTGCGAGGCAAG...........................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................GGAACACCATATACGCGGCC.	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTA...........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........ATTTATGGAGCTGGTGCGC.................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................CTTCTGCTGACGTGACA--TAA----TAATA.........................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAAGT-----GTCAA-------------------------TATTATTATTTATTAAGC.................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GAGCTGGTGCGAGGCAAG...........................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................TAAA------------------------------------------------CCTTCTGCTGACGTGACA--TAA----T.............................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................TTAAGCCAACTAAA------------------------------------------------CCTTCTGCTGACG............................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GAGCTGGTGCGAGGCAAGGCCAAGAC...................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................ACACCATATACGCGGC..	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...................................GCCAAGACATGGACGGTT.........................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TTTGATGCATCCGTATCGGAACAC..............	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................CGCAATTTTGATGCATCCGT........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GCCGCAATTTTGATGCATCC..........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTATCGGAACACCA............	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAAGT-----GTCAA-------------------------TATTATTATTTATT.....................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................TAAA------------------------------------------------CCTTCTGCTGACGTGACA--TAA----TA............................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............ATGGAGCTGGTGCGAGGCAAGGC.........................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.............................................................................................................CAACTAAA------------------------------------------------CCTTCTGCTGACGT...........................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TTTGATGCATCCGTATCGGAAC................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................GCATCCGTATCGGAACACCATATAC.......	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................TAAA------------------------------------------------CCTTCTGCTGACGTGACA--TA...................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................CTAAA------------------------------------------------CCTTCTGCTGACGTGACA--TAA----..............................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAAGT-----GTCAA-------------------------TATTATTATTTATTCCC..................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TTGATGCATCCGTATCGGAACACCAT...........	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATCCC...................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTTGATGCATCCGTATCG....................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CAAGGCCAAGACATGGACGGT..........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTT.......................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TATGGAGCTGGTGCGAGGC..............................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GAAGAATTTATGGAGCTGGTG....................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CCAACTAAA------------------------------------------------CCTTCTGCTGACGTGACA--T....................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATCC........................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................ATCGGAACACCATATACGC.....	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CAAGGCCAAGACATGGAC.............................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAAGT-----GTCAA-------------------------TATTATTATTTATC.....................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCCGTATCGGAACACCAT...........	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CCAACTAAA------------------------------------------------CCTTCTGCTGACGTGACA--.....................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................AAGACATGGACGGTAAGT-----GTCAA-------------------------T..................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TAGCGAAGAATTTATGGAGCTGGT.....................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AATTTTGATGCATCCGTATCGGAACACC.............	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TGACA----T------TTTAAATA-ACAG..................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GCCGCAATTTTGATGCATCCGTATCGGAA.................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................ATAATATAAT-TGACA----T------TTTA...........................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTAAA.....................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATCCT...................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......AGAATTTATGGAGCTGGTGC...................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTCC......................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................GCGAGGCAAGGCCAAGACATGGA..............................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................CGTATCGGAACACCATATACGC.....	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................TAAGT-----GTCAA-------------------------TATTATTATT.........................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................ATAATATAAT-TGACA----T------TTTAA..........................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTC........................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTAAGT-----GTCAA-------------------------TATTATTATTTATTCT...................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........ATTTATGGAGCTGGTGCGAGGCAA............................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................ATCGGAACACCATATACGCGGC..	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TAAGTGATGAATTCATAGAGCTGGTGCGCAGCAAAGCAAAGACATGGACGGTAAGC-----TATTAA------------------------TATTATTA-------------------------------------------------TTAT-------------GATTATGATGACGTGACA--T----------------T--T-CCATTGT--T------TATTTCCA-TTAGCCTGGTCGCAACTTTGATGCATCTGTATCAGAGGGACATATACGCGGCCT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..............................................................................................................................................................................................................................................................GCATCTGTATCAGAGGGACAT...........	21	1	7.00	7	3	0	0	0	0	4
...........................................................................................................................................................................................................................................................GATGCATCTGTATCAGAGGGACAT...........	24	1	7.00	7	4	0	0	0	0	3
...........................................................................................................................................................................................................................................GCCTGGTCGCAACTTTGAT................................	19	1	4.00	4	4	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCTGTATCAGAGGGA..............	21	1	2.00	2	1	0	0	0	0	1
.....GATGAATTCATAGAGCTGGTGCGC.................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
..............................................................................................................................................................................................................................................................GCATCTGTATCAGAGGGAC.............	19	1	2.00	2	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................GATGCATCTGTATCAGAGGGAC.............	22	1	2.00	2	1	0	0	0	0	1
..AGTGATGAATTCATAGAGCTGGT.....................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................CATCTGTATCAGAGGGAC.............	18	1	1.00	1	1	0	0	0	0	0
...............TAGAGCTGGTGCGCAGCAAAG..........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
...GTGATGAATTCATAGAGCT........................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...........................GCAGCAAAGCAAAGACATGGAC.............................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
........GAATTCATAGAGCTGGTGCG..................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................................................GTCGCAACTTTGATGCATCTGTATCA....................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................ATGCATCTGTATCAGAGGGA..............	20	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................GCATCTGTATCAGAGGGACATA..........	22	1	1.00	1	1	0	0	0	0	0
.....GATGAATTCATAGAGCTGGTG....................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...GTGATGAATTCATAGAGCTGGTGC...................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.....GATGAATTCATAGAGCTGGTGCGCA................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.....................TGGTGCGCAGCAAAGCAAAGACATGGA..............................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................ATCTGTATCAGAGGGACA............	18	1	1.00	1	0	0	1	0	0	0
......................................................................................................................................................................................A--T----------------T--T-CCATTGT--T------TATTTCCA-TTAG..................................................	24	1	1.00	1	1	0	0	0	0	0
............................CAGCAAAGCAAAGACATGGAC.............................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................GATGCATCTGTATCAGAGGG...............	20	1	1.00	1	1	0	0	0	0	0
.....GATGAATTCATAGAGCTG.......................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
...............TAGAGCTGGTGCGCAGCAAAGCAAAG.....................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................GTATCAGAGGGACATATACGCGGC..	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................CAGAGGGACATATACGCGGCCT	22	1	1.00	1	1	0	0	0	0	0
................................AAAGCAAAGACATGGACG............................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................GCATCTGTATCAGAGGGA..............	18	1	1.00	1	0	0	0	0	0	1
.......................GTGCGCAGCAAAGCAAAGACATGGAC.............................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.............CATAGAGCTGGTGCGCAGCAAAGCAAAG.....................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1

droGri2

TTAGCGATGAATTCATTGAGTTGGTAAAAAGCAAGGCCACAACCTGGACGGTAAGT-----CAAT--------------ATGATGACCATGA---CTATCA-------CATACATATATATATATATATTTATACAAATATATTTCTGTTTT----------------------------------------------------------TA----T------TGTTAATC-GCAGCCTGGACGCAACTTTGATGCGGCCGTGTCGGAGCATCATATACGTGCCCT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...........................................................................................................................................................................................................................................................GATGCGGCCGTGTCGGAGCA...............	20	1	14.00	14	5	9
...........................................................................................................................................................................................................................................................GATGCGGCCGTGTCGGAGC................	19	1	6.00	6	1	5
..............................................................................................................................................................................................................................................................GCGGCCGTGTCGGAGCATC.............	19	1	5.00	5	5	0
............................................................................................................................................................................................................................................................ATGCGGCCGTGTCGGAGCA...............	19	1	4.00	4	1	3
..........................................................................................................................................................................................................................................................TGATGCGGCCGTGTCGGAGCA...............	21	1	3.00	3	1	2
...............TTGAGTTGGTAAAAAGCAAGGCCACA.....................................................................................................................................................................................................................................................	26	1	3.00	3	1	2
.........................................................................................................................................................................................................................................................TTGATGCGGCCGTGTCGGA..................	19	1	2.00	2	0	2
........................................................................................................................................................................................................................................................TTTGATGCGGCCGTGTCGGAG.................	21	1	2.00	2	0	2
...........................................................................................................................................................................................................................................................GATGCGGCCGTGTCGGAG.................	18	1	2.00	2	2	0
...........................................................................................................................................................................................................................................................GATGCGGCCGTGTCGGAGCATC.............	22	1	2.00	2	0	2
.......................................................................................................................................................................................................................................................CTTTGATGCGGCCGTGTCGGAGC................	23	1	2.00	2	0	2
.........................................................................................................................................................................................................................................................TTGATGCGGCCGTGTCGGAGCA...............	22	1	2.00	2	0	2
.........................................................................................................................................................................................................................................................TTGATGCGGCCGTGTCGGAGC................	21	1	2.00	2	1	1
..............................................................................................................................................................................................................................................................GCGGCCGTGTCGGAGCATCAT...........	21	1	1.00	1	0	1
..........................................................................................................................................................................................................................................................TGATGCGGCCGTGTCGGAG.................	19	1	1.00	1	0	1
...........................................................................................................................................................................................................................................................GATGCGGCCGTGTCGGAGCATCA............	23	1	1.00	1	0	1
.............................................................................................................................................................................................................................................................TGCGGCCGTGTCGGAGCATCATATAC.......	26	1	1.00	1	1	0
........................................................................................................................................................................................................................................................TTTGATGCGGCCGTGTCGGAGCATCATA..........	28	1	1.00	1	1	0
.............CATTGAGTTGGTAAAAAGCAAGGCCACA.....................................................................................................................................................................................................................................................	28	1	1.00	1	1	0
..............................................................................................................................................................................................................................................................GCGGCCGTGTCGGAGCATCATA..........	22	1	1.00	1	0	1
...............TTGAGTTGGTAAAAAGCAAGGCC........................................................................................................................................................................................................................................................	23	1	1.00	1	1	0
.....................................................................................................................................................................................................................................................AACTTTGATGCGGCCGTGTCGGA..................	23	1	1.00	1	0	1
....................TTGGTAAAAAGCAAGGCC........................................................................................................................................................................................................................................................	18	1	1.00	1	1	0
.........AATTCATTGAGTTGGTAAAAA................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1
......................................................................................................................................................................................................................................................ACTTTGATGCGGCCGTGTCGGAGC................	24	1	1.00	1	0	1
.........AATTCATTGAGTTGGTAAAA.................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1
..............ATTGAGTTGGTAAAAAGCAAGG..........................................................................................................................................................................................................................................................	22	1	1.00	1	0	1
.................GAGTTGGTAAAAAGCAAGGCCACA.....................................................................................................................................................................................................................................................	24	1	1.00	1	0	1
.................GAGTTGGTAAAAAGCAAGGC.........................................................................................................................................................................................................................................................	20	1	1.00	1	0	1
.............................AGCAAGGCCACAACCTGGACGC...........................................................................................................................................................................................................................................	22	1	1.00	1	1	0
..........................AAAAGCAAGGCCACAACCTGGA..............................................................................................................................................................................................................................................	22	1	1.00	1	1	0
..........................................................................................................................................................................................................................................................TGATGCGGCCGTGTCGGAGC................	20	1	1.00	1	1	0
.....................................................................................................................................................................................................................................................AACTTTGATGCGGCCGTGTCGGG..................	23	1	1.00	1	0	1
...................GTTGGTAAAAAGCAAGGCCA.......................................................................................................................................................................................................................................................	20	1	1.00	1	1	0
......................................................................................................................................................................................................................................................ACTTTGATGCGGCCGTGTCGGAGCA...............	25	1	1.00	1	0	1
...................................................................................................................................................................................................................................................GCAACTTTGATGCGGCCGTGTCGGAG.................	26	1	1.00	1	0	1
..............ATTGAGTTGGTAAAAAGCAAGGCCACA.....................................................................................................................................................................................................................................................	27	1	1.00	1	0	1
......................GGTAAAAAGCAAGGCCACA.....................................................................................................................................................................................................................................................	19	1	1.00	1	1	0
............................................................................................................................................................................................................................................................ATGCGGCCGTGTCGGAGCATC.............	21	1	1.00	1	0	1
........................................................................................................................................................................................................................................................TTTGATGCGGCCGTGTCGGAGCA...............	23	1	1.00	1	0	1
..........................AAAAGCAAGGCCACAACCTGGACG............................................................................................................................................................................................................................................	24	1	1.00	1	1	0

dsi_10791

node_24415:60409-60485 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads