ID:

dsi_10763

 Coordinate:

x:16783034-16783167 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.4 -8.6 -8.5 -8.5

Flybase annnotation

exon [x_16783168_16783307_+]; CDS [x_16783168_16783307_+]; exon [x_16782855_16783033_+]; CDS [x_16782855_16783033_+]; intron [x_16783034_16783167_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCGGGAGGCCCTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCGATCGATGCGAATGTAGTTATACCCTATATAAAAAGAGATAGCCCCCTTTCTCTGAACCACACATACATATGTCCTTTTGCGAGCACCTTTGCTGAGATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
***************************************************................(((((....(((.((................(((((..........)))))..)).)))....))).))************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 GSM343915
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
...................................................TGAGTTTAGTTCCGATCGATGCGAA.............................................................................................................................................................. 25 0 1 2.00 2 1 0 0 1 0 0 0 0
........................TGGACCTCAAGGAGTCGCGAGTTGCGG....................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0
...................GCGGCTGGACCTCAAGGAGTCG................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0
...........................ACCTCAAGGAGTCGCGAGTTG.......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0
.............................................................TCCGATCGATGCGAATGTAGTTATAC................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................................................................TTGCATGCACCTTTGATGAGAT....................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0
..............................TCAAGGAGTCGCGAGTTGCGG....................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................TTATACGCTTTGTTCCAGATAGGTAT.............................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................AATCGACGTGCCAAGGT..................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................TATGGTTCCAGAATCGACGTG............................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0
TGCGGGAGGCCCTGGCCATGC..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGCCAAGGTGCGTAAGCGCGA......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................CTTTCTCTGAACCACACATACATATG.................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................TCCGATCGATGCGAATGTAGTTATACC.................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0
.................................AGGAGTCGCGAGTTGCGGTGA.................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................AGTTGCGGTGAGTTTAGTTCC.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................TATGGTTCCAGAATCGACGTGCCAAG....................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................GACCTCAAGGAGTCGCGAGTT........................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................TGCGGTGAGTTTAGTTCCGATCGATGC................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................CGATGCGAATGTAGTTATACC.................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................TTATACGCTTTGTTCCAG...................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................TCGACGTGCCAAGGTGCGTAAGCGCGA......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................AGATTATACGCTTTGTTCCAG...................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................GTTTAGTTCCGATCGATGCGA............................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................TGTAGTTATACCTTATTCAAAAAGAGA................................................................................................................................... 27 3 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................AAGGTGCGTAAGCGCGAGC....... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................GTTCCGATCGATGCGAATGT........................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................TTTAGTTCCGATCGATGCGAATGTAGTGC...................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TTCCGATCGATGCGAATGTAG......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................CTTTTGCGAGCACCTTTGCTG........................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................TAGGTATGGTTCCAGAATCGACGTGC........................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................TTAGTTCCGATCGATGCGAATGTAGT........................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0
..................TGCGGCTGGACCTCAAGGAGT................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..................TGCGGCTGGACCTCAAGGAGTCGC................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................GTATGGTTCCAGAATCGACGT............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................ACGCTTTGTTCCAGATAGGTA............................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................ATCGACGTGCCAAGGTGCGTAAGCGCGA......... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GCTTTGATCCAGATATGT................................................ 18 2 3 0.33 1 0 0 0 1 0 0 0 0
...............................CAAGGGGTCGCGAGT............................................................................................................................................................................................ 15 1 8 0.13 1 0 0 0 1 0 0 0 0
TGCGAGAGGCCCTGG........................................................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 1 0 0 0 0
.......GGCCCTGGCCAGGCCGCCGG............................................................................................................................................................................................................... 20 3 19 0.11 2 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................................AGCGACGTGCGAAGGTG.................... 17 2 11 0.09 1 1 0 0 0 0 0 0 0
.GCGGGCGGCCCCGGCCA........................................................................................................................................................................................................................ 17 2 15 0.07 1 1 0 0 0 0 0 0 0
.....................GACTGGACCTCAAGGTG.................................................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 0 0 1
...........................ACCTCAAGGAGTCAGG............................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0
...............................CAAGGGGTCGCGAGTTCG......................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................................TTCCAGATAGGTAGGGTGG......................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

ACGCCCTCCGGGACCGGTACGCCGACCTGGAGTTCCTCAGCGCTCAACGCCACTCAAATCAAGGCTAGCTACGCTTACATCAATATGGGATATATTTTTCTCTATCGGGGGAAAGAGACTTGGTGTGTATGTATACAGGAAAACGCTCGTGGAAACGACTCTAATATGCGAAACAAGGTCTATCCATACCAAGGTCTTAGCTGCACGGTTCCACGCATTCGCGCTCGTGTGCTT
**************************************************************************************************................(((((....(((.((................(((((..........)))))..)).)))....))).))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
.......................................................................................................................................CAGGAAAACGCTCGTGGAAA............................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
............................................................................................................GGGAAAGAGACTTGGTGTGTATGTAT.................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................ATCGGGGGAAAGAGACTT................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0
..................ACGCCGACCTGGAGTTCCTCA................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................AGAGACTTGGTGTGTATGTAT.................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................TCAAGGCTAGCTACGCTTACATCAAT...................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................GTATACAGGAAAACGCTCGTG................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................CTGCCAAGGTCTTAGCTGCACGGTT........................ 25 2 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................TACCAAGGTCTTAGCTGCACG........................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................CAGGAAAACGCTCGTGGAAG............................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
..GCCCTCCGGGACCGGTACGC.................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................CGGGGGAAAGAGACTTGGTGT............................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................ATCCATACCAAGGTCTTAGCT................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................ATTTGGTGTGTAGGTATACAGC............................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................................................................CTAATATGCGAAACAAGGTCT..................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................GGAAAACGCTCGTGGAAA............................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................GTCTTAGCTGCACGGTTCCAC.................... 21 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................................CTCTAATATGCGAAACAAGGTCTGT................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................TACAGGAAAACGCTCGTGGAA................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TCTATCGGGGGAAAGAGA.................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................AGGTGCACGGCTCCTCGCAT................ 20 3 3 0.33 1 0 0 0 0 1 0 0
.....CTCCGGGACCGCTAAGTCGAC................................................................................................................................................................................................................ 21 3 10 0.10 1 0 0 0 0 0 1 0
.................................................................................................................................................................................................GTCTTCGCTGCATGCTTCC...................... 19 3 14 0.07 1 0 0 0 0 0 1 0
..................................................................................................................................................TGGTGGAAACGACTC......................................................................... 15 1 19 0.05 1 1 0 0 0 0 0 0
....................................................................................AGGGGTTATATTTTTCT..................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0
.......................................................................TGCTTAGATCAATATGG.................................................................................................................................................. 17 2 20 0.05 1 1 0 0 0 0 0 0
......................................................................................................................................................................GGCGAAACAAGGCCTA.................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:16782984-16783217 + dsi_10763 TGCGGGAGGCCCTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCGATC--GA-----------------------------TGCGAATGTAGTTATACCCTATATAAAAAGA----GAT---------------------------------AGCCCC-CTTTCTCTGAACC---------------------------------ACACATA-----------C-------------------------------------------------------------------------------------ATATGTCCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
droSec2 scaffold_17:1516394-1516626 + dse_920 TGCGGGAGGCCCTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCGATC--GA-----------------------------TGCGAATGTAGTTATACCTTATTCAAAAAGA----GAT---------------------------------AGC-CC-CTTTCTCTGAACC---------------------------------ACACATA-----------C-------------------------------------------------------------------------------------ATATGTCCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
dm3 chrX:17670259-17670498 + TGCGGGAGGCCCTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCGATC--GA-----------------------------TTCGAATGTAGTTATACCATATCCAAGAAGAAGAAGATT--------------------------------ACC-CC-CGTTCTCTGAACC---------------------------------ATACATA-----------CA-----------------------------------------------------------------------------------TATTTGTCCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
droEre2 scaffold_4690:8012172-8012268 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
droYak3 X:16297970-16298100 + AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CT-CCTTTCCCGAACC---------------------------------ACATACA-----------CA-----------------------------------------------------------------------------------CACATGTCCT------------TTGGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
droEug1 scf7180000408176:1019596-1019826 - TGCGGGAAGCCCTGGCCATGAGGCTGGACCTCAAGGAGTCGAGAGTTGCGGTGAGTTTAGTTTCAATC--AA-----------------------------A-------------------------------------------------------------------------------------------GGAAGGAAATTGTTTTCTTTTCAGTTAGTTAACTTC---TCTTTAGCTAG-------------------------------------------------------------------------------TACCCATGACTAGCA-GTTA--------GTTACGA----TCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
droBia1 scf7180000301760:3691753-3691854 + A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATG---T------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGAGCCAAGGTGCGTAAGCGCGAGCACACGAA
droTak1 scf7180000415210:321698-321795 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
droEle1 scf7180000490982:230843-230936 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGTGAGCACACGAA
droRho1 scf7180000779481:139520-139621 - TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAA
droFic1 scf7180000449699:71123-71226 - CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTCGT------------TTGGCGA----GCACCTTTGCTGAG----ATTATACACTTTGTTCCAGATAGGTATGGTTCCAGAATCGAAGAGCCAAAGTCCGTAAGCGGGAGCACACGAA
droKik1 scf7180000302344:1351527-1351780 + TGCGCGAGGAGGTTGCCCTGCGGATCAGCCTCAGTGAGGCGCGCGTTCAGGTGAATGCTTTTGAGGCG--AAGAGCAGGCAAA--GTATCCAACCAGTTGGAGAGGCCGCAATTATTCCACTTGCAAAA-------TATT--------------------------------ACC-AT-CTTCATTT---CG-----------------------------TAGCATAC---TTT----------------------------------------------------------------------------------------------TCAGGTCCT------------CTTGGTC----CCATGGTTGTTTTTAATATTTGTACA--TTATTATCCGCAGGTTTGGTTCCAGAATCGACGAGCCAAATGGC------GCAAGCAGGCGAG
droAna3 scaffold_13335:367195-367424 - TGCGGGAGGCCCTCGCCATGCGGCTGGATCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTTTAATTGGAA-------------------------------------------------------------TAAGATATATC----------TGAGAAGTTCATCCTTAAAGC-CCTCTATCCCTAATCC---------------------------------CTA--AA-----------CT------------------------------------------------------------------------------------CTATGACTG------------TTTGCGA----TCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAACCGGCGGGCCAAGGTGCGTAAGCGCGAACACACCAA
droBip1 scf7180000396484:47995-48211 + TGCGGGAGGCCCTCGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCAATTGGA-----TCTTAAA--ATATTTAATAGATAGGATA------------------------------------TATAGTATATAGTTT-----------------------------------------GGAAA-----------------------------------------------------------------------------------------------------------------------------------A----------T--TGTATTTGCGA----TCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAACACACCAA
dp5 XL_group1e:12060933-12061112 + TGCGCGAGGCATTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTCTCGTTCCAC------------------------------------------------------------------------------------------------------------------------------AGGACCGAA------------------------------------------CAT-CCGCC-----------------------------------------------------------------------------------CCG------------TATCCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGGGCCAAGGTGCGTAAGCGCGAGCACACCAA
droPer2 scaffold_14:1548583-1548762 - TGCGCGAGGCATTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTCTCGTTCCAC------------------------------------------------------------------------------------------------------------------------------AGGACCGAA------------------------------------------CAT-CCGCA-----------------------------------------------------------------------------------CCG------------TATCCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGGGCCAAGGTGCGTAAGCGCGAGCACACCAA
droWil2 scf2_1100000004909:4023391-4023613 + TGCGTGAGGCACTTGCCATGCGTTTGGATTTAAAAGAATCACGAGTTGCGGTGAGTTTAGTTGCAATT--GA----------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------------------------------------GTGATTTCTCGTGGGGGATTGGGGTGGGGGGAAGCGGGAATATGGAATATTTATTTG------------TTTGCCT----GCACTTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAAGTGCGGAAGCGTGAGCATACCAA
droVir3 scaffold_12928:2627951-2628168 - dvi_8656 TGCGCGAGGCCCTGGCCATGCGTCTGGATCTCAAGGAGTCGCGAGTTGCGGTGAGTTCAGTTGCAATC--GC-----------------------------T-------------------------------------------------------------------------------------------CGAGCGACGGCGTCTGCG---------------------TCTTTGGCTCG-------------------------------------------------------------------------------CCAGCTCGCCTATTG-GTTGGCCACGCTT---TGG----GCATCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAACACACCAA
droMoj3 scaffold_6473:14394940-14395130 - TGCGCGAGGCCCTGGCCATGCGGCTCGACCTGAAGGAGTCGCGAGTTGCGGTGAGTTCAGTTGCGATC--GAACGCACCCAGAAAGCTG------------TGCGCCTGCCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAGTTCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACCAA
droGri2 scaffold_14853:6762244-6762513 + TGCGCGAGGCGCTCGCCATGCGACTCGATCTCAAGGAGTCGCGAGTTGCGGTGAGTTCAGTTCCAATTCCAA-----------------------------TGCCAATGC------------------------------------------------------------------------C---------AATTCCAAA------------------------------------------CATTATGAAACGTATGAAAAGCCGTTGGGCAATTGTCGTTGGTTTGAATTGATGGATTG--------------------ATGGATTGATTGATTGATTGGT--TGATTTGGCGA----GCATCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGTGAGCACACCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCGGGAGGCCCTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCGATC--GA-----------------------------TGCGAATGTAGTTATACCCTATATAAAAAGA----GAT---------------------------------AGCCCC-CTTTCTCTGAACC---------------------------------ACACATA-----------C-------------------------------------------------------------------------------------ATATGTCCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................TGAGTTTAGTTCCGATC--GA-----------------------------TGCGAA.........................................................................................................................................................................................................................................................................................................................................................2512.00200000000011000000
........................TGGACCTCAAGGAGTCGCGAGTTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000002000000
...................GCGGCTGGACCTCAAGGAGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...........................ACCTCAAGGAGTCGCGAGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.............................................................TCCGATC--GA-----------------------------TGCGAATGTAGTTATAC..............................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
..............................TCAAGGAGTCGCGAGTTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................TTATACGCTTTGTTCCAGATAGGTAT..............................................2611.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AATCGACGTGCCAAGGT.....................1711.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTCCAGAATCGACGTG............................2111.00100000010000000000
TGCGGGAGGCCCTGGCCATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGGTGCGTAAGCGCGA.........2111.00100000000001000000
...................................................................................................................................................................................CTTTCTCTGAACC---------------------------------ACACATA-----------C-------------------------------------------------------------------------------------ATATG......................................................................................................................2611.00100000010000000000
.............................................................TCCGATC--GA-----------------------------TGCGAATGTAGTTATACC.............................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
.................................AGGAGTCGCGAGTTGCGGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...........................................AGTTGCGGTGAGTTTAGTTCC....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTCCAGAATCGACGTGCCAAG.......................2611.00100000000001000000
..........................GACCTCAAGGAGTCGCGAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..............................................TGCGGTGAGTTTAGTTCCGATC--GA-----------------------------TGC............................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...................................................................C--GA-----------------------------TGCGAATGTAGTTATACC.............................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTATACGCTTTGTTCCAG......................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGTGCCAAGGTGCGTAAGCGCGA.........2711.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................AG----ATTATACGCTTTGTTCCAG......................................................2111.00100000000100000000
......................................................GTTTAGTTCCGATC--GA-----------------------------TGCGA..........................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTGCGTAAGCGCGAGC.......1911.00100000000001000000
...........................................................GTTCCGATC--GA-----------------------------TGCGAATGT......................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.......................................................TTTAGTTCCGATC--GA-----------------------------TGCGAATGTAGTGC.................................................................................................................................................................................................................................................................................................................................................2911.00100000000001000000
............................................................TTCCGATC--GA-----------------------------TGCGAATGTAG....................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................CT------------TTTGCGA----GCACCTTTGCTG...............................................................................2111.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAGGTATGGTTCCAGAATCGACGTGC...........................2611.00100000000100000000
........................................................TTAGTTCCGATC--GA-----------------------------TGCGAATGTAGT...................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
..................TGCGGCTGGACCTCAAGGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..................TGCGGCTGGACCTCAAGGAGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGTTCCAGAATCGACGT.............................2111.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................ACGCTTTGTTCCAGATAGGTA...............................................2111.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGTGCCAAGGTGCGTAAGCGCGA.........2811.00100000000001000000
droSec2
TGCGGGAGGCCCTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCGATC--GA-----------------------------TGCGAATGTAGTTATACCTTATTCAAAAAGA----GAT---------------------------------AGC-CC-CTTTCTCTGAACC---------------------------------ACACATA-----------C-------------------------------------------------------------------------------------ATATGTCCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................TTTAGTTCCGATC--GA-----------------------------TGCGAA.........................................................................................................................................................................................................................................................................................................................................................2113.0031020
..............................TCAAGGAGTCGCGAGTTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................2113.0031020
...............................CAAGGAGTCGCGAGTTGCGGT................................................................................................................................................................................................................................................................................................................................................................................................................2113.0031020
....................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTCCAGATAGGTATGGT...........................................2112.0020020
..............................................................................................................................................................................................................................................................................................................................................................................................................................AATCGACGTGCCAAGGTGCGT.................2112.0020020
..........................GACCTCAAGGAGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGTGCCAAGGTGCGT.................2011.0010010
.......................................CGCGAGTTGCGGTGAGTTTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
....................................................GAGTTTAGTTCCGATC--GA-----------------------------TGC............................................................................................................................................................................................................................................................................................................................................................2111.0011000
......................................................GTTTAGTTCCGATC--GA-----------------------------TGCGA..........................................................................................................................................................................................................................................................................................................................................................2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGGTGCGTAAGCGCGA.........2111.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGATAGGTATGGTTCCA.......................................2111.0010001
...............................................................................................................................................................................................................................................................................................................................................................................................TACGCTTTGTTCCAGATAGGG................................................2111.0011000
............................................................TTCCGATC--GA-----------------------------TGCGAATGTAGT...................................................................................................................................................................................................................................................................................................................................................2211.0010010
................................................................GATC--GA-----------------------------TGCGAATGTAGTTAT................................................................................................................................................................................................................................................................................................................................................2111.0011000
............................................................TTCCGATC--GA-----------------------------TGCGAATGTAG....................................................................................................................................................................................................................................................................................................................................................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................................................TGAG----ATTATACGCTTTGTTCC........................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................TATGTCCT------------TTTGCGA----GCACCT.....................................................................................2111.0011000
......................GCTGGACCTCAAGGAGTCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGTGCGTAAGCGCGAGC.......2111.0010010
dm3
TGCGGGAGGCCCTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCGATC--GA-----------------------------TTCGAATGTAGTTATACCATATCCAAGAAGAAGAAGATT--------------------------------ACC-CC-CGTTCTCTGAACC---------------------------------ATACATA-----------CA-----------------------------------------------------------------------------------TATTTGTCCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTCCAGAATCGACGTGCCAAGG......................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAATCGACGTGCCAAGGTGCGTA................2713.0030000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................AGTTTAGTTCCGATC--GA-----------------------------TTCG...........................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAATCGACGTGCCAAGGTGC...................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................A-----------------------------TTCGAATGTAGTTATACCAT...........................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
................................AAGGAGTCGCGAGTTGCGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTTTAGTTCCGATC--GA-----------------------------TTCGAA.........................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGTCCT------------TTTGCGA----GCACCTTTGCTGA..............................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GACCTCAAGGAGTCGCGAGTTGCGGT................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAGGTATGGTTCCAGAATCGACGTGC...........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGAATCGACGTGCCAAGGTGC...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGACGTGCCAAGGTGCGT.................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTGAGTTTAGTTCCGATC--GA-----------------------------TTCGAA.........................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATTTGTCCT------------TTTGCGA----GCACCTTTGC.................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGGCCATGCGGCTGGACCTCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CACCTTTGCTGAG----ATTATACGCTTTGTT..........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGACCTCAAGGAGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................GTGAGTTTAGTTCCGATC--GA-----------------------------T..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTGGACCTCAAGGAGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAATCGACGTGCCAAGGTGCGT.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TCCT------------TTTGCGA----GCACCTTTGCTGAG----A........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAATCGACGTGCCAAGGTGCGTA................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCAGAATCGACGTGCCAA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................TGGACCTCAAGGAGTCGCGAGTTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGAATCGACGTGCCAAGGTG....................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGGAGTCGCGAGTTGCGGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TACATA-----------CA-----------------------------------------------------------------------------------TATTTGTCCT------------TTTGCGA----GC.........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGTGCCAAGGTGCGTAAGCGCGA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTTGTCCT------------TTTGCGA----GCACCTTTGCTGA..............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGAATCGACGTGCCAAG.......................2111.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CGA----GCACCTTTGCTGAG----ATTA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGCCAAGGTGCGTAAGCGCGAG........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TATACCATATCCAAGAAGAAGAAGAT.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................AGTTCCGATC--GA-----------------------------TTCGAATGT......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................GGACCTCAAGGAGTCGCGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGTTCCAGAATCGACGTGCCA.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCGGGAGGCCCTGGCCATGCGGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGACCTCAAGGAGTCGCGAGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AGTTCCGATC--GA-----------------------------TTCGAATGTAGTT..................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGCCAAGGTGCGTAAGCGCGT.........2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGAATCGACGTGCCAAGGTGCG..................2611.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTTGCGA----GCACCTTTGCTGAG----.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CACCTTTGCTGAG----ATTATACG.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CTTTGCTGAG----ATTATACGCTTTGTTCCA.......................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TACGCTTTGTTCCAGATAGGTATGGTT..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTCCAGATAGGTATGGT...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................G----ATTATACGCTTTGTTCCAGATAGGTA...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATACGCTTTGTTCCAGATAGGTATG.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CCT------------TTTGCGA----GCACCTTTGCTGA..............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGTGCGTAAGCGCGAGC.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GTTGCGGTGAGTTTAGTTCCGATC--GA-----------------------------T..............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................GCGAGTTGCGGTGAGTTTAGTTCCGA..................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CCTTTGCTGAG----ATTATACGCTTTGTT..........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCTCAAGGAGTCGCGAGTTGCGGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGTTCCAGAATCGA................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATACGCTTTGTTCCAGATAGGT................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAATCGACGTGCCAAGGTGC...................2311.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTCCAGAATCGACGTGCCAAG.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CATA-----------CA-----------------------------------------------------------------------------------TATTTGTCCT------------TTTGCGA----GCACC......................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................TTAGTTCCGATC--GA-----------------------------TTCGAATGTAGT...................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTTAGTTCCGATC--GA-----------------------------TTCGAATGTAGT...................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTGGACCTCAAGGAGTCGCGAGTTGCGGT................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................TTGCGGTGAGTTTAGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTTGTCCT------------TTTGCGA----GCACCTTTGCT................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTAAGCGCGAGCACACGA.2011.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTAGTTCCGATC--GA-----------------------------TTCGAAAA.......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CAAGGAGTCGCGAGTTGCGGT................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGAATCGACGTGCCAAGGT.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGGTGCGTAAGCGCGAGC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTCCAGAATCGACGTGCT..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATACGCTTTGTTCCAGATAGGTATGGT...........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ACCTTTGCTGAG----ATTATACGCTTTG............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
droEre2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CT-CCTTTCCCGAACC---------------------------------ACATACA-----------CA-----------------------------------------------------------------------------------CACATGTCCT------------TTGGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TGCGGGAAGCCCTGGCCATGAGGCTGGACCTCAAGGAGTCGAGAGTTGCGGTGAGTTTAGTTTCAATC--AA-----------------------------A-------------------------------------------------------------------------------------------GGAAGGAAATTGTTTTCTTTTCAGTTAGTTAACTTC---TCTTTAGCTAG-------------------------------------------------------------------------------TACCCATGACTAGCA-GTTA--------GTTACGA----TCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotal
No Reads
droBia1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATG---T------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGAGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotal
No Reads
droTak1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotal
No Reads
droEle1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGTGAGCACACGAASizeHit CountTotal NormTotal
No Reads
droRho1
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGT------------TTTGCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACGAASizeHit CountTotal NormTotal
No Reads
droFic1
CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTCGT------------TTGGCGA----GCACCTTTGCTGAG----ATTATACACTTTGTTCCAGATAGGTATGGTTCCAGAATCGAAGAGCCAAAGTCCGTAAGCGGGAGCACACGAASizeHit CountTotal NormTotal
No Reads
droKik1
TGCGCGAGGAGGTTGCCCTGCGGATCAGCCTCAGTGAGGCGCGCGTTCAGGTGAATGCTTTTGAGGCG--AAGAGCAGGCAAA--GTATCCAACCAGTTGGAGAGGCCGCAATTATTCCACTTGCAAAA-------TATT--------------------------------ACC-AT-CTTCATTT---CG-----------------------------TAGCATAC---TTT----------------------------------------------------------------------------------------------TCAGGTCCT------------CTTGGTC----CCATGGTTGTTTTTAATATTTGTACA--TTATTATCCGCAGGTTTGGTTCCAGAATCGACGAGCCAAATGGC------GCAAGCAGGCGAGSizeHit CountTotal NormTotal
No Reads
droAna3
TGCGGGAGGCCCTCGCCATGCGGCTGGATCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTTTAATTGGAA-------------------------------------------------------------TAAGATATATC----------TGAGAAGTTCATCCTTAAAGC-CCTCTATCCCTAATCC---------------------------------CTA--AA-----------CT------------------------------------------------------------------------------------CTATGACTG------------TTTGCGA----TCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAACCGGCGGGCCAAGGTGCGTAAGCGCGAACACACCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGCGGGAGGCCCTCGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTTTAGTTCCAATTGGA-----TCTTAAA--ATATTTAATAGATAGGATA------------------------------------TATAGTATATAGTTT-----------------------------------------GGAAA-----------------------------------------------------------------------------------------------------------------------------------A----------T--TGTATTTGCGA----TCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAACACACCAASizeHit CountTotal NormTotal
No Reads
dp5
TGCGCGAGGCATTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTCTCGTTCCAC------------------------------------------------------------------------------------------------------------------------------AGGACCGAA------------------------------------------CAT-CCGCC-----------------------------------------------------------------------------------CCG------------TATCCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGGGCCAAGGTGCGTAAGCGCGAGCACACCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TGCGCGAGGCATTGGCCATGCGGCTGGACCTCAAGGAGTCGCGAGTTGCGGTGAGTCTCGTTCCAC------------------------------------------------------------------------------------------------------------------------------AGGACCGAA------------------------------------------CAT-CCGCA-----------------------------------------------------------------------------------CCG------------TATCCGA----GCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGGGCCAAGGTGCGTAAGCGCGAGCACACCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGCGTGAGGCACTTGCCATGCGTTTGGATTTAAAAGAATCACGAGTTGCGGTGAGTTTAGTTGCAATT--GA----------------------------------------------------------------------------------------------------------------------------CA-----------------------------------------------------------------------------------GTGATTTCTCGTGGGGGATTGGGGTGGGGGGAAGCGGGAATATGGAATATTTATTTG------------TTTGCCT----GCACTTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAAGTGCGGAAGCGTGAGCATACCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGTTCCAGAATCGACGTGCCAAAG......................2811.00110000
droVir3
TGCGCGAGGCCCTGGCCATGCGTCTGGATCTCAAGGAGTCGCGAGTTGCGGTGAGTTCAGTTGCAATC--GC-----------------------------T-------------------------------------------------------------------------------------------CGAGCGACGGCGTCTGCG---------------------TCTTTGGCTCG-------------------------------------------------------------------------------CCAGCTCGCCTATTG-GTTGGCCACGCTT---TGG----GCATCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAACACACCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TGCGCGAGGCCCTGGCCATGCGGCTCGACCTGAAGGAGTCGCGAGTTGCGGTGAGTTCAGTTGCGATC--GAACGCACCCAGAAAGCTG------------TGCGCCTGCCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAGTTCACCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGCGAGCACACCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................TC--GAACGCACCCAGAAAGCTG------------TGCGCC.........................................................................................................................................................................................................................................................................................................................................................2711.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................ATACGCTTTGTTCCAGATAG..................................................2011.001010000
droGri2
TGCGCGAGGCGCTCGCCATGCGACTCGATCTCAAGGAGTCGCGAGTTGCGGTGAGTTCAGTTCCAATTCCAA-----------------------------TGCCAATGC------------------------------------------------------------------------C---------AATTCCAAA------------------------------------------CATTATGAAACGTATGAAAAGCCGTTGGGCAATTGTCGTTGGTTTGAATTGATGGATTG--------------------ATGGATTGATTGATTGATTGGT--TGATTTGGCGA----GCATCTTTGCTGAG----ATTATACGCTTTGTTCCAGATAGGTATGGTTCCAGAATCGACGTGCCAAGGTGCGTAAGCGTGAGCACACCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:39 PM