ID:

dsi_10638

 Coordinate:

2r:12217714-12217918 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.7 -11.7 -11.2 -11.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CAGATCGCCTGGAAATATTGAACTACCTACGACGGCTCCTAGAGATTGGGGTCTGTTTTTTTTGGGTCCAATCACTATAAAAGTTACAATTAGCAAGCGACAGAGGTAACCCCCTTCCCGGAATGGCAATTTTATGAAACTCCTTGTTGTGTCCAAGTTTGCCAAGTCTGATTATTCATGTTTTTTATTTGTTCGCGCAGCTCGTTGGGTTTTATTTTCTTGTATTTTTTTTTGTATTTTTGCTTGGCCCATTTATGCATGACATTCTGTTTTATTTGTGCGAGTGTGTGTTTGCGGGAGAGTCA
*********************************************************************************************************************************************************......(((((((...((.(((..........(((..........(((((...)))))..........))).........))).))...)))))..))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
.........................................................................................................................................................CAAGTTTGCCAAGTCTGATT.................................................................................................................................... 20 0 1 10.00 10 8 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGGTAATCTTGTGAAACTCC.................................................................................................................................................................. 20 3 3 7.33 22 0 14 0 1 4 0 0 2 1 0 0
..................................................................................................................................................................................................................................................................GTGACACTCTGTTTGATTTGT.......................... 21 3 9 7.00 63 0 0 0 52 0 0 7 4 0 0 0
.......................................................................................................................................................TCCAAGTTTGCCAAGTCTGAT..................................................................................................................................... 21 0 1 7.00 7 6 1 0 0 0 0 0 0 0 0 0
................ATTGAACTACCTACGACGGCT............................................................................................................................................................................................................................................................................ 21 0 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTAATCTTGTGAAACTCC.................................................................................................................................................................. 19 3 11 5.00 55 18 36 0 0 1 0 0 0 0 0 0
........................................................................................................................................................CCAAGTTTGCCAAGTCTGATT.................................................................................................................................... 21 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0
..............ATATTGAACTACCTACGACGG.............................................................................................................................................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TTTGTATTTTTGCTTGGCCCA...................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTTTTTATTTGTTCGCGCAGC........................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
........CTGGAAATATTGAACTACCT..................................................................................................................................................................................................................................................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TGACACTCTGTTTGATTTGTA......................... 21 3 7 2.57 18 0 0 0 17 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................TTTTTGTATTTTTGCTTGGCC........................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CAATTTTATGAAACTCCTTGT.............................................................................................................................................................. 21 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0
..........................................................................................................................ATGGCAATTTTATGAAACTCC.................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TGACACTCTGTTTGATTTGT.......................... 20 2 2 1.50 3 0 0 0 2 0 0 1 0 0 0 0
.......................................................................TCACTATAAAAGTTACAATTA..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................CTCCTAGAGATTGGGGTCTGT......................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................ATTCTGTTTTATTTGTGC........................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TTGCCAAGTCTGATTATT................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................ATGACATTCTGTTTTATTTGT.......................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................AGTGTGTGTTTGCGGGAGA.... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................AATGGCAATTTTATGAAAC..................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................TATGAAACTCCTTGTTGTGTC........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......CCTGGAAATATTGAACTACCT..................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................TCTGTTTTATTTGTGCGAGT.................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GCGAGTGTGTGTTTGCGGGAGA.... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TATTTGTGCGAGTGTGTGTT............. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................TTTTTATTTGTTCGCGCAGCTCG..................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GTTTTTTATTTGTTCGCGCA.......................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................TTGTGTCCAAGTTTGCCAAGT.......................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................ATTTATGCATGACATTCTGTT.................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CGCAGCTCGTTGGGTTTTATT......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................TGAACTACCTACGACGGCTCC.......................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ATGTTTTTTATTTGTTCGCGCA.......................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................CTACGACGGCTCCTAGAGATT.................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TGCGAGTGTGTGTTTGCGGG....... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................ATCACTATAAAAGTTACA......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................TTACAATTAGCAAGCGAC............................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGGGTTTTATTTTCTTGTATTT.............................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................ATTAGCAAGCGACAGAGGTAAC................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................CCAAGTCTGATTATTCATGTT........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................ATTGAACTACCTACGACGG.............................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTATGAAACTCCTTGTTGTGT......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................CTCGTTGGGTTTTATTTTCT..................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTATTTGTTCGCGCAGCTC...................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TGACATTCTGTTTTATTTGTG......................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................AACCCCCTTCCCGGAATGGCA................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTATTTGTTCGCGCAGCT....................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................TGTTTTATTTGTGCGAGTGTT................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TATTTGTTCGCGCAGCTCGTT................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTATTTGTTCGCGCAGCC....................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTTTGTATTTTTGCTTGGCCC....................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTCCAAGTTTGCCAAGTCTG....................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................TTAGCAAGCGACAGAGGTAACC.................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................CCGGAATGGCAATTTTATGAAACTC................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................TACGACGGCTCCTAGAGGTTG................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTCCCGGAATGGCAATTTTAT.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................CTCCTTGTTGTGTCCAAGTTT................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................AATGGCAATTTTATGAAACTCC.................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................CCCGGAATGGCAATTTTATGAAACTC................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................TTGAACTACCTACGACGGCTC........................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................GTGCGAGTGTGTGTTTGCGGG....... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................TTTATGAAACTCCTTGTTGTG.......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................CCTAGAGATTGGGGTCTGTTT....................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................GTTGTGTCCAAGTTTGCCAA............................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................TCTGTTTTATTTGTGCGAGTG................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................ATTTTTGCTTGGCCCATTT................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................CGAGTGTGTGTTTGCGGA....... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGGTAATCTTGTGAAACTC................................................................................................................................................................... 19 3 20 0.15 3 0 1 0 0 1 0 1 0 0 0 0
.............................................................................................................................GTAATTTTGTGAAACTCC.................................................................................................................................................................. 18 2 15 0.13 2 1 1 0 0 0 0 0 0 0 0 0
......................................CTAGTGATAGGGCTCTGTTT....................................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................GTATTTTTGCTTGTCC........................................................ 16 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................TTGGCAATCTTGTGAAACTC................................................................................................................................................................... 20 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTTTATTTTATTGTATTTTTTCTT........................................................................ 24 2 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................GTGCGCGTGCGTGTTAGCGG........ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................TGACACTCTGTTTGATTT............................ 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.AGACCGCCTGGGAATA................................................................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTTTTTTTAGGATTTTTGCT............................................................. 20 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTCTAGCGGACCTTTATAACTTGATGGATGCTGCCGAGGATCTCTAACCCCAGACAAAAAAAACCCAGGTTAGTGATATTTTCAATGTTAATCGTTCGCTGTCTCCATTGGGGGAAGGGCCTTACCGTTAAAATACTTTGAGGAACAACACAGGTTCAAACGGTTCAGACTAATAAGTACAAAAAATAAACAAGCGCGTCGAGCAACCCAAAATAAAAGAACATAAAAAAAAACATAAAAACGAACCGGGTAAATACGTACTGTAAGACAAAATAAACACGCTCACACACAAACGCCCTCTCAGT
******************************************************......(((((((...((.(((..........(((..........(((((...)))))..........))).........))).))...)))))..))********************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
...............................................................CCCAGGTTAGTGATATTTTCA............................................................................................................................................................................................................................. 21 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0
.................................................................CAGGTTAGTGATATTTTCAAT........................................................................................................................................................................................................................... 21 0 1 10.00 10 9 1 0 0 0 0 0 0 0 0
......................................................................................................................................................CAGGTTCAAACGGTTCAGACT...................................................................................................................................... 21 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0
................................................................CCAGGTTAGTGATATTTTCAA............................................................................................................................................................................................................................ 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAACACAGGTTCAAACGGTT............................................................................................................................................ 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TCAGACTAATAAGTACAAAAA........................................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.....................TGATGGATGCTGCCGAGGATC....................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...........................................................................................TCGTTCGCTGTCTCCATTGGG................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................AACACGCTCACACACAAACGC......... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................CGAACCGGTTAGATAAGTACTGT......................................... 23 3 1 2.00 2 0 0 0 2 0 0 0 0 0 0
............................TGCTGCCGAGGATCTCTAACC................................................................................................................................................................................................................................................................ 21 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................CACAGGTTCAAACGGTTC........................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GAACCGGTTAGATAAGTACTGT......................................... 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................GTTCAAACGGTTCAGACTAAT................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................CAATGTTAATCGTTCGCTGTCT......................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................CTAACCCCAGACAAAAAA.................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................CCAGGTTAGTGATATTTT............................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................CCCAGGTTAGTGATATTTTC.............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................CGGGTAAATACGTACTGTAAG...................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ACACAGGTTCAAACGGTT............................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................CTCCATTGGGGGAAGGGCCTTA..................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ACCGGGTAAATACGTACTTTA........................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................CCAGGTTAGTGATATTTTC.............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................TCGCTGTCTCCATTGGGGGAA............................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................CTGCCGAGGATCTCTAACCC............................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................GAACAACACAGGTTCAAAC................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................CCGGGTAAATACGTACTGTAA....................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................CACAGGTTCAAACGGTTCAGA........................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................AAGGGCCTTACCGTTAAAATA.......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................AACACAGGTTCAAACGGTTC........................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AACAAGCGCGTCGAGCAACC................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CACGCTCACACACAAACGCCC....... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................ATGCTGCCGAGGATCTCTAAC................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................ATGGATGCTGCCGAGGATC....................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........ACCTTTATAACTTGATGGATG................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................TTACGTACTGTAAGACAAAATA.............................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................ACAACACAGGTTCAAACGGTT............................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TCAACACAGGTTCAAACGGTT............................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GTTCAGACTAATAAGTACAAA.......................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................AAAAAGGCAGGCTAGTGATATT................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0
..........................................................GAAAACCCAGGTTAGTGAT.................................................................................................................................................................................................................................... 19 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................ACTGTGAGACAAACTAAACAT......................... 21 3 7 0.29 2 0 0 0 2 0 0 0 0 0 0
...........................................................AAAAGGCAGGCTAGTGATAT.................................................................................................................................................................................................................................. 20 3 7 0.29 2 0 0 0 0 0 0 0 2 0 0
...................................................................GGTTAGTGAAATTTTGAATCTT........................................................................................................................................................................................................................ 22 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................................................CTGTGAGACAAACTAAACATG........................ 21 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................CACTGTGAGACAAACTAAACA.......................... 21 3 9 0.22 2 0 0 0 1 0 0 0 1 0 0
........................TGGAAGCTGCCGAGG.......................................................................................................................................................................................................................................................................... 15 1 16 0.19 3 0 0 0 1 0 1 0 0 1 0
..............................................................................................................................................................................................................................................................TAAGTAGTGTAAGACCAAAT............................... 20 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0
......................GGTGGAAGCTGCCGAGG.......................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
........................................................AAAAAAAACCAGGTTA......................................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
......................GGTGGAAGCTGCCGAG........................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................AAAAATAAACAAGCGGGTT......................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12217664-12217968 - dsi_10638 C-AGATCGCCT-GGAAATATTGAACT-ACC-TACGACGGCTCCTAGAG------------A------------------------TTGGGGTCTGTTT-------------TT---TTTG-GGTCCAATCA-----CT-ATA-AAAGTTACAATTAGCA---A-GC-GACAGAG---GTA----------------A----CC--CCCTT-CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTATG-AAAC--TCCTTGTTGT--GTCC-AAGTTTGCCA----AGTC--TGATTATTCATGTTTTTTATTTGTT--CGCGCAGCTCGT--------TGGGTTTTATTTTC-TTG--------------TA----TT--TTTTTTTGTATTT-T--------------------------------TGCTTGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCA
droSec2 scaffold_1:9045214-9045516 - C-AGATCGCCT-GGAAATATTGAACT-ACC-TACG---GCTCCTAGAG------------A------------------------TTGGGGTCTGTTT-------------TT---TTTG-GGTCCAATCA-----CA-ATA-AAAGTTTCAATTAGCA---A-GC-GACAGAG---GTA----------------T----TC--CCCTT-CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTCTG-AAAC--TCCTTGTTGT--GTCC-AAGTTTGCCA----AGTC--TGATTATTCATGTTTTTTATTTGTT--CGCGCAGCTCGT--------TGGGTTTTATTTTC-TTG--------------TA----TT-TTTTTTTTGTATTT-T--------------------------------TGCTTGGCC-CATTTATACATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCA
dm3 chr2R:11552124-11552442 - C-AGATCGCCT-GGAAATATTGAACT-ACC-TACG---GCTCCTAGAG------------A------------------------TTGGGGTCTGTTTTCTTTTTTTTTT-TT---TTTG-GTTCCAATCA-----CT-ATA-AAAGTTTCAATTAGCA---A-GC-GACAGAG---GTA----------------A----CC--CCCTT-CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTCTG-AAAC--TCCTTGCTGT--GTCC-AAGTCTGCCA----AGTC--TGATTATTCATGTTTTTTATTTGTT--CGCGCTGCTCGT--------TGGGTTTTATTTTC-TTGTT-----------GTA----TTTTTTTTTTTGTATTT-T--------------------------------TGCTTGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCA
droEre2 scaffold_4845:14311175-14311464 + C-AGATCGCCCTG-AAATTATCAACT-T------------TCCTAGAG------------G------------------------TTGGGGTCTGTTT-------------------TTC-GGGCCAATCA-----CT-ATA-AAAGTTTCAATTAGCG---A-GC-GACAGAG---GTA----------------A----AC--CCCTA-CC-CC--GAAC--A---T-GGAATG---------------------------------------------GCAAT-----------TTTCTG-AAAC--TCCTTGTTGT--GCCC---GCTTGCCA----ACTC--AGATTATTCATGTTT-TTATTTGTT--CGCTCAGCTCGT--------TGGGTTTTATTTTC-CT-------------------------TTTTTTTGTATTTTT--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGC--GCG--------------AGTGTGTG-----------TT-TGCGAGAGAGTCA
droYak3 2R:17438124-17438444 + C-AGATCGCCT-GGAAATTTTCAACT-ACC-TACA---GCTCCTAGAG------------G-----------------------TTTGAGGTCTGTTT-C----------GGTTCTGTTC-GGGCCAATCA-----CT-ATA-AAAGTTTCAATTAGCG---A-GC-GACTGAG---GTAA---AGAGG-----TAA----CC--CCCTA-TC-CC-------------CAGAATG---------------------------------------------GCAAT-----------TTTCTA-AAAC--TCCTTGTTGT--GCCC---GCTTGCCA----ACTC--AGATTATTCATGTTT-TTATTTGTT--CGCGCAGCTCGT--------TGGGTTTTATTTT--ATTTT------------CTTTTCTTTTTTTTTTTGTATTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCA
droEug1 scf7180000409672:439244-439563 - G-AGATCGCCTAGGAAAATTTAATTTTACC-TAC--------CTAG--------------C------------------------TCGAGGTCTGTTT-------------TT-C-TTTC-GGTCCAATCA-----TT-ATA-AAATATTCAATTAGCG-C-A-GCTAACAGAG---GTAA---------TCTA--AGTACCTTGCCACT-CG----------------CCGAATG---------------------------------------------GCAAT-----------TTTCTA-GAAC--TCCTTGTTGC--CCCCGCCGTCTGCCA----ACTTTGAGATTATTCATGTTT-TTATTTGTT--CGCGCTGCTCGT--------TTGGTT-TATTTTA-AT-------------------------TTTTATTTTTTTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCGGTTA------TAT------TTGT--GCGATTGTGTGTGTGTGTGTGTGTG-----------TT-TGCGGGAGAGTCA
droBia1 scf7180000302292:4111533-4111847 + C-AGATCGCCTTGGAAAATTTCAGCT-ACC-AG---------CTAGCC------------A------------------------CAGAGCTCTGTTC------------------TGCC-GACCCAATCA-----CT-ATA-AAATATTCAATTAGCTGCAAGGC-CACAAAG---GTAA--------CTC----AG-------CCCAA-CC--CCTGTGT--G---TT--CTTG---------------------------------------------CCAAC-----------TTTCTGAAAAC--TCCTTGTTGC-TGCCC---CAGTGCCA---AACTC--TGATTATTCATTTTC-TTATTTGTT--CGCACAGCTCGT--------CTGGTTTTATTTCC-ATTTT---------TTCCA----AT-TTTTTATTTCATTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGCTG------TAT------TTGT--GCG--------------AGTGTGTG-----------TTTTGCGGGAGAGTCA
droTak1 scf7180000415241:139080-139389 + T-AGATCGGCCTGGAGAATTTCATCA-ACC-CACA----------------------------------------------------GGGGACTGTTT-------------T----TTTC-GACCCAATCA-----CT-ATA-AAATATTCAATTAGCTACGGAGC-TACAGAG---GTA----------------A----CC--CCCCT-CCCCC--CACCGCCTTTT-TGAAC----------------------------------------------CCAAT-----------TTTCTG-AAAC--TCCTTGTTGC-TGCCC---GTCTACCA----ACTC--TGATTATTCATTTTTTTTATTTGTT--CGCACAGCTCGC--------TTGGTTTTATTTCC-ATTTC---------GTTCA----TTTTATTTTTTGTATTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGGTT------TAT------TTGT--GCG--------------AGTATGTG-----------TT-TGCGGGAGAGTCA
droEle1 scf7180000491107:520022-520301 - G-GGATCGCCTAGGAAAATTTCATAT-ACC-------------------------------------------------------TCGGGGTCTGTTT-------------TTACATTTC-GGGCCAATCA-----CT-ATA-AAATATTCAATTAGCG---A-GC-AACAGAAACAGTG--------------AAA----CT--TC------------------------------------------------------------------------------G------------TTCCG-AAAC--TCCTTGTT----GCCC---GTCTGCCA----ACTC--AGATTATTCATGTTT-TTATTTGCT--CGCCCAGCTCGT--------TTGGTTTTATTTTC-ATTTT-CATTTTCATTTTA----AT---TTTTTTTTTTTT-T--------------------------------TGT-TGGCC-CATTTATGCATGACATTCTGTGC------------------T--GTG--------------AGTGTGTG-----------TTTTGCGGGAGAGTCA
droRho1 scf7180000779911:573033-573301 + C-GGATCGCCTAGGAAAATTTCATAT-ACC-------------------------------------------------------TCGAAGTCTGTTT-------------TT---TTTC-GGGCCAATCA-----CT-ATA-AAATATTCAATTAGCG---A-GC-GACAGAG---GTA--------------TAA----CC--CC------------------------------------------------------------------------------T-----------TTTC-A-AAAC--TCCTTGTT----CCCC---GTCTGCCA----ACTC--AGATTATTCATGTTTTTTATTTGTT--CGCGCTGCTCGT--------TTGGTTTTATTTTC-ATTTT------------AA-----T--TTTAATTTTTTTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCGGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCA
droFic1 scf7180000453809:41988-42300 - G-GAATCGCCTAGGAAAATTTCACTC-ACC-TACG---GCTCCTGAAGCTCCAAGTCGAAG------------------------TCGAAATCTGTTT-------------TT---TTTCGGGCCCAATCA-----CT-ATA-AAATATTCAATTAGCC---A-GCTGGCAGAG---GTAC--------CTA----A----A---CCCTAACC--C-----------------------------------------------------------------------GCTTTGTTTGTTTGTA-GAAC--TCCTT-------------------CGAAAAAACTC--TGATTATTCATGTTT-TTATTTGTT--CGCGCAACTCGT--------TTGGTTTTATTTTC-ATTTT------------CATTTCAT---TTTTTTATTTTT-T--------------------------------TTC-TGGCC-CATTTATGCATGACATTCCGTTTC-----AAG------TTGC--GCG--------------AGTGTGAG-----------TTTTGCGGGAGAGTCA
droKik1 scf7180000302682:1707480-1707766 - G-AGATCGCCTTGGAAAATTTCAGCT-GCC-TGC-------CTTAA--------------------------------------------------------------------------------AAACAGCCGTCT-ATA-AAATATTCAATTAGCCA--GGGC-GAAAG------TGAGGGAAAGG-----TAA----CC--CCC-------C--GAGT--A---TTGAAATG---------------------------------------------GCACT-----------TTTCAG-AAACTCTCCTTG---------------------------TC--GGATTATTCATGTTT-TTATTTGTT--CGCGCAGCTCAT--------TTGGTTTTATTTTCCATTTTTCGTTGT-----GA-----------TTTTGTATTTTTT---------------------GTTATTTGCTGGC-TGGCC-CATTTATGCATGACATTCTGTTC------AGT------GTGTGCGCG--------------AGTGTGTG-----------TT-T--GGGAGAGTCA
droAna3 scaffold_13266:12633862-12634137 + C-CGATCTTATTGGAAAATTTCAACC-ACC-AAAG---GCC-----------------------------------------TGCCTAAGGTCTGTTT---------------------T-AGACCAATTA-----CT-ATA-AAATATTCAATTAGCA-C-------AGAGAG---GTA----------------A----CC--CC-TA-CT-TC--TACT-----------------------------------------------------------ATAAG-----------TTACTG-AAAC--TCCTTTCT----GTCC---GGCTGCCA----AGAT--AGATTCTTCGTGTTT-TTATTT-TT--CGCATTATTCGT--------TTTGGTTTATT-------------------------------------CGTATTTTT--------------------------------TAC-TGGCC-CATTTATGCATGACATTCTGTAT------TGTTTCGGGTCGAGAACG--------------AGTGTGTGT------TG---T-ATTGGGAGAGTCA
droBip1 scf7180000396372:131787-132073 + CCGGATCGTATTGGAAAATTTCAACC-ACC-TAAG---C------------------------------TTGCCTGCCTGCCTGCCTGAGGTCTGTT---------------------TC-AGACCAATCA-----CT-ATA-AAATATTCAATTAACA-C-------AGAGAG---GTA----------------A----CC--CTT-------C--TACG--A---TGAGAATA---------------------------------------------CGACG-----------TTACTGAAAAC--TCCTTTCTGTCCGTCC---GGCTGTCA----AGTT--AGATTATTCATGTTTTTTAGTCGTT--TTCG------------------GGTTTTGT-------------------------------------TCGTATTTTT--------------------------------TAC-TGGCC-CATTTATGCATGACATTCTGTTC------GAG------CTCT---CG--------------AGTGTGTGTCGTTTGTGTAT----TGGGAGAGTCA
dp5 3:19632469-19632816 + T---ATTGCCTTGGAAAATTCTA-CC-AGCGT------------AGA------------AGGAAACGTCTTGCCC-TCTGCCGGACCCTGGTCTGTT---------------------TC-GAACTATACA-----CTCATAAAAATATTCAATTAGTG----------GAAAG---GTAC---------TCT----GCA----------------------------CTAGAATCCACCACCACTCCCCCTTCAACTCCAACTCCTTTGGAGTGGATCAGCCAACTGATTTGGTTAT---------------TTGTC----GTCT---GTCTGCCA----CC------ATTATTCATATTTT--ATTTTTT-TTCTGTT--TCGGTTTCGGATTGCGTTTCAT-------TTC---------ACTTA----TT---TTTTTTTTCTGT-T--------------------------------TGCTTGGCCCCTTTTCTGGATGACATTCTCTGTGTGTTTTCT------TGGT--GTG--------------TGTGTGTA-----------TT----AGGAGAGTCA
droPer2 scaffold_37:633814-634163 + T---ATTGCCTTGGAAAATTCTA-CC-AGCGT------------AGA------------AGGAAACGTCTTGCCC-TCTGCCGGACCCTGGTCTGTT---------------------TC-GAACTATACA-----CTCATAAAAATATTCAATTAGTG----------GAAAG---GTAC---------TCT----GCA----------------------------CTAGAATCCACCACCACTCCCCCTTCAACTCCAACTCCTTTGGAGTGGATCAGCCAACTGATTTGGTTAT---------------TTGTC----GTCT---GTCTGCCA----CC------ATTATTCATATTTT--ATTTTTTTTTCTGTT--TCGGTTTCGGATTGCGTTTCAT-------TTC---------ACTTA----TT--TTTTTTTTTCTGT-T--------------------------------TGCTTGGCCCCTTTTATGGATGACATTCTCTGTGTGTTTTCT------TGGT--GTG--------------TGTGTGTA-----------TT----AGGAGAGTCA
droWil2 scf2_1100000004822:1545007-1545138 + G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCA----AATG--TGATTATTCATGTTT-CTATTTGTT--G----------------------------------------------------------------TTTT-------GTACTGAGGCGCGGAGGAGTATC----------TAC-ATATG-TATGTATG--TGAGA-GGGGTCT------TAT------TTGT--TTG----TG--TTTGTATGTGTATG-----------AT-T-GGCAACAGTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
C-AGATCGCCT-GGAAATATTGAACT-ACC-TACGACGGCTCCTAGAG------------A------------------------TTGGGGTCTGTTT-------------TT---TTTG-GGTCCAATCA-----CT-ATA-AAAGTTACAATTAGCA---A-GC-GACAGAG---GTA----------------A----CC--CCCTT-CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTATG-AAAC--TCCTTGTTGT--GTCC-AAGTTTGCCA----AGTC--TGATTATTCATGTTTTTTATTTGTT--CGCGCAGCTCGT--------TGGGTTTTATTTTC-TTG--------------TA----TT--TTTTTTTGTATTT-T--------------------------------TGCTTGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................C-AAGTTTGCCA----AGTC--TGATT.............................................................................................................................................................................................................................................20110.001082000000000000000
...................................................................................................................................................................................................................................................................................................................................TCC-AAGTTTGCCA----AGTC--TGAT..............................................................................................................................................................................................................................................2117.00761000000000000000
..................ATTGAACT-ACC-TACGACGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.00532000000000000000
....................................................................................................................................................................................................................................................................................................................................CC-AAGTTTGCCA----AGTC--TGATT.............................................................................................................................................................................................................................................2114.00431000000000000000
................ATATTGAACT-ACC-TACGACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00330000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTATTT-T--------------------------------TGCTTGGCC-CA..............................................................................................2113.00330000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TTTTTTATTTGTT--CGCGCAGC...............................................................................................................................................................................................................2113.00330000000000000000
.........CT-GGAAATATTGAACT-ACC-T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00330000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTATTT-T--------------------------------TGCTTGGCC-................................................................................................2112.00220000000000000000
..........................................................................................................................................................................................................................................................................................CAAT-----------TTTATG-AAAC--TCCTTGT................................................................................................................................................................................................................................................................................2112.00200001100000000000
.........................................................................................................................................................................................................................................ATG---------------------------------------------GCAAT-----------TTTATG-AAAC--TCC....................................................................................................................................................................................................................................................................................2112.00220000000000000000
................................................................................................................................TCA-----CT-ATA-AAAGTTACAATTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.......................................CTCCTAGAG------------A------------------------TTGGGGTCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGTTT------TAT------TTGT--GC..................................................1811.00100000100000000000
...........................................................................................................................................................................................................................................................................................................................................TTGCCA----AGTC--TGATTATT..........................................................................................................................................................................................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACATTCTGTTT------TAT------TTGT--....................................................2111.00100000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTG-----------TT-TGCGGGAGA....1911.00100000100000000000
........................................................................................................................................................................................................................................AATG---------------------------------------------GCAAT-----------TTTATG-AAAC--.......................................................................................................................................................................................................................................................................................1911.00100000100000000000
...........................................................................................................................................................................................................................................................................................................TATG-AAAC--TCCTTGTTGT--GTC........................................................................................................................................................................................................................................................................2111.00110000000000000000
........CCT-GGAAATATTGAACT-ACC-T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTT------TAT------TTGT--GCG--------------AGT................................2011.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--------------AGTGTGTG-----------TT-TGCGGGAGA....2211.00100000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------TTGT--GCG--------------AGTGTGTG-----------TT-.............2011.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................TTTTTATTTGTT--CGCGCAGCTCG............................................................................................................................................................................................................2311.00100000100000000000
......................................................................................................................................................................................................................................................................................................................................................................GTTTTTTATTTGTT--CGCGCA.................................................................................................................................................................................................................2011.00100000100000000000
............................................................................................................................................................................................................................................................................................................................TTGT--GTCC-AAGTTTGCCA----AGT.....................................................................................................................................................................................................................................................2111.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATGCATGACATTCTGTT..........................................................................2111.00100000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................CGCAGCTCGT--------TGGGTTTTATT........................................................................................................................................................................................2111.00110000000000000000
....................TGAACT-ACC-TACGACGGCTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ATGTTTTTTATTTGTT--CGCGCA.................................................................................................................................................................................................................2211.00110000000000000000
.............................C-TACGACGGCTCCTAGAG------------A------------------------TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GCG--------------AGTGTGTG-----------TT-TGCGGG.......2011.00100000100000000000
...............................................................................................................................ATCA-----CT-ATA-AAAGTTACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
...................................................................................................................................................TTACAATTAGCA---A-GC-GAC...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGGGTTTTATTTTC-TTG--------------TA----TT--T........................................................................................................................................................2211.00100000100000000000
........................................................................................................................................................ATTAGCA---A-GC-GACAGAG---GTA----------------A----C...................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000000000
..............................................................................................................................................................................................................................................................................................................................................CCA----AGTC--TGATTATTCATGTT....................................................................................................................................................................................................................................2111.00110000000000000000
..................ATTGAACT-ACC-TACGACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
..........................................................................................................................................................................................................................................................................................................TTATG-AAAC--TCCTTGTTGT--GT.........................................................................................................................................................................................................................................................................2111.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CTCGT--------TGGGTTTTATTTTC-T...................................................................................................................................................................................2011.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTATTTGTT--CGCGCAGCTC.............................................................................................................................................................................................................1911.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACATTCTGTTT------TAT------TTGT--G...................................................2111.00100010000000000000
...................................................................................................................................................................................A----------------A----CC--CCCTT-CC----------------CGGAATG---------------------------------------------GCA.................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTTATTTGTT--CGCGCAGCT..............................................................................................................................................................................................................1911.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT------TAT------TTGT--GCG--------------AGTGTT.............................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TATTTGTT--CGCGCAGCTCGT--------T..................................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTTATTTGTT--CGCGCAGCC..............................................................................................................................................................................................................1911.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATTT-T--------------------------------TGCTTGGCC-C...............................................................................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................T--GTCC-AAGTTTGCCA----AGTC--TG................................................................................................................................................................................................................................................2111.00100010000000000000
.........................................................................................................................................................TTAGCA---A-GC-GACAGAG---GTA----------------A----CC--................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
....................................................................................................................................................................................................................C----------------CGGAATG---------------------------------------------GCAAT-----------TTTATG-AAAC--TC.....................................................................................................................................................................................................................................................................................2511.00110000000000000000
................................................................................................................................................................................................................TT-CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTAT...............................................................................................................................................................................................................................................................................................2111.00100000100000000000
...................................................................................................................................................................................................................................................................................................................C--TCCTTGTTGT--GTCC-AAGTTT................................................................................................................................................................................................................................................................2111.00100000100000000000
........................................................................................................................................................................................................................................AATG---------------------------------------------GCAAT-----------TTTATG-AAAC--TCC....................................................................................................................................................................................................................................................................................2211.00100000100000000000
...................................................................................................................................................................................................................CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTATG-AAAC--TC.....................................................................................................................................................................................................................................................................................2611.00110000000000000000
...................TTGAACT-ACC-TACGACGGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GCG--------------AGTGTGTG-----------TT-TGCGGG.......2111.00100000100000000000
.........................................................................................................................................................................................................................................................................................................TTTATG-AAAC--TCCTTGTTGT--G..........................................................................................................................................................................................................................................................................2111.00100010000000000000
.........................................CCTAGAG------------A------------------------TTGGGGTCTGTTT-------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
...........................................................................................................................................................................................................................................................................................................................GTTGT--GTCC-AAGTTTGCCA----A.......................................................................................................................................................................................................................................................2011.00100000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTT------TAT------TTGT--GCG--------------AGTG...............................2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-T--------------------------------TGCTTGGCC-CATTT...........................................................................................1911.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--------------AGTGTGTG-----------TT-TGCGGA.......1820.50110000000000000000
droSec2
C-AGATCGCCT-GGAAATATTGAACT-ACC-TACG---GCTCCTAGAG------------A------------------------TTGGGGTCTGTTT-------------TT---TTTG-GGTCCAATCA-----CA-ATA-AAAGTTTCAATTAGCA---A-GC-GACAGAG---GTA----------------T----TC--CCCTT-CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTCTG-AAAC--TCCTTGTTGT--GTCC-AAGTTTGCCA----AGTC--TGATTATTCATGTTTTTTATTTGTT--CGCGCAGCTCGT--------TGGGTTTTATTTTC-TTG--------------TA----TT-TTTTTTTTGTATTT-T--------------------------------TGCTTGGCC-CATTTATACATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTT--CGCGCAGCTCGT--------TGG................................................................................................................................................................................................2116.0060204
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GCG--------------AGTGTGTG-----------TT-TGCGG........2114.0041300
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------TTGT--GCG--------------AGTGTGTG-----------TT-T............2114.0040301
.............................................................................................................................................................................................................................................................................................................................................................................ATTTGTT--CGCGCAGCTCGT--------TG.................................................................................................................................................................................................2114.0040103
.....................................................................................................................................................TCAATTAGCA---A-GC-GACAGAG---G...........................................................................................................................................................................................................................................................................................................................................................................................................................2113.0032001
.........................................................................................................................................................................................................................................................................................................................TTGTTGT--GTCC-AAGTTTGCCA----........................................................................................................................................................................................................................................................2113.0030003
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GCG--------------AGTGTGTG-----------TT-TGCGGGA......2113.0032100
........................................................................................................................................................................................................................................AATG---------------------------------------------GCAAT-----------TTTCTG-AAAC--TC.....................................................................................................................................................................................................................................................................................2113.0032001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGTTT------TAT------TTGT--GCG--------------AG.................................2112.0021100
.........................................................................................................................................................................................................................................................................................................................TTGTTGT--GTCC-AAGTTTGCC.............................................................................................................................................................................................................................................................2012.0020101
......................................................................................................................................................CAATTAGCA---A-GC-GACAGAG---GT..........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020101
...............................TACG---GCTCCTAGAG------------A------------------------TTGGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGT--GCG--------------AGTGTGTG-----------TT-TGCG.........2112.0020002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTT------TAT------TTGT--GCG--------------AGTGT..............................2112.0021001
............................................................................................................................................................................................................................................................................................AT-----------TTTCTG-AAAC--TCCTTGTTG..............................................................................................................................................................................................................................................................................2112.0021100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------TAT------TTGT--GCG--------------AGTGTGTG-----------T...............2112.0020101
...........................................................................................................................................................................................................................................................................................AAT-----------TTTCTG-AAAC--TCCTTGTT...............................................................................................................................................................................................................................................................................2112.0021100
..............AAATATTGAACT-ACC-TACG---GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--------------AGTGTGTG-----------TT-TGCGGGAG.....2112.0020101
.....................................................................................TTGGGGTCTGTTT-------------TT---TTTG-GGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTT------TAT------TTGT--GCG--------------AGTG...............................2112.0020101
..............................................................................................................................................................................................................................................................................................................................................................................................TCGT--------TGGGTTTTATTTTC-TTG--------------...................................................................................................................................................................2112.0022000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-.............2112.0020200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT------TAT------TTGT--GCG--------------AGTGTG.............................2112.0021001
...........................................................................................................................................................................................................................................................................................................TCTG-AAAC--TCCTTGTTGT--GTC........................................................................................................................................................................................................................................................................2111.0010001
...................................................................................................................................................................................................................................................................................................................................TCC-AAGTTTGCCA----AGTC--TGAT..............................................................................................................................................................................................................................................2111.0010001
..........................................................................................................................................................................................................................................................................................................................TGTTGT--GTCC-AAGTTTGCCA----A.......................................................................................................................................................................................................................................................2111.0010001
........................................................................................................................................................................................................................................................................................................................CTTGTTGT--GTCC-AAGTTTGCC.............................................................................................................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................................................................................................................................................................................TCATGTTTTTTATTTGTT--CGC....................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--------------------------------TGCTTGGCC-CATTTATACA......................................................................................2111.0010001
................................................................................................................................................................................................................................................................................................................................................................................TGTT--CGCGCAGCTCGT--------TGGGT..............................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................TCTG-AAAC--TCCTTGTTGT--C..........................................................................................................................................................................................................................................................................1911.0011000
............................................................................................................................................................................................................................................................................................................CTG-AAAC--TCCTTGTTGT--GTCC-......................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT------TAT------TTGT--GCG--------------AGTGTGT............................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................................................TTATTTGTT--CGCGCAGCTCGT--------...................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................................................................................................................................................T--GTCC-AAGTTTGCCA----AGTC--TG................................................................................................................................................................................................................................................2111.0010001
.............................C-TACG---GCTCCTAGAG------------A------------------------TTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........CT-GGAAATATTGAACT-ACC-TA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.....................................................................................................................................................................................................................................................................................................................................C-AAGTTTGCCA----AGTC--TGATTA............................................................................................................................................................................................................................................2111.0011000
.........................................................................................................................................................................................................................................................................................................TTTCTG-AAAC--TCCTTGTTGT--G..........................................................................................................................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................TTCTG-AAAC--TCCTTGTTGT--GT.........................................................................................................................................................................................................................................................................2111.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------TTGT--GCG--------------AGTGTGTG-----------TT-.............2011.0010001
.........................................................................................................................................................................................................................................................................................................TTTCTG-AAAC--TCCTTGTTGT--GT.........................................................................................................................................................................................................................................................................2211.0010001
.........................................................................................................................................................................................................................................................................................................................TTGTTGT--GTCC-AAGTTTGCCA----TT......................................................................................................................................................................................................................................................2311.0010001
....................................................................................................................................................................................................................................................................................................................................................................ATGTTTTTTATTTGTT--CGCGC..................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................TTGCCA----AGTC--TGATTATTCAT.......................................................................................................................................................................................................................................2111.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-T............2211.0010001
............................................................................................................................................................................................................................................................................................................................................................................TATTTGTT--CGCGCAGCTCGT--------T..................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................CA----AGTC--TGATTATTCATGT.....................................................................................................................................................................................................................................1911.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATTT-T--------------------------------TGCTTGGCC-C...............................................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATTT-T--------------------------------TGCTTGGCC-CATT............................................................................................2211.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGACATTCTGTTT------TAT------TTG.......................................................2111.0011000
...............................................................................................................................................................................................................................................................................................................................................................................TTGTT--CGCGCAGCTCGT--------TGGGT..............................................................................................................................................................................................2211.0010100
............................CC-TACG---GCTCCTAGAG------------A------------------------TTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
........................CT-ACC-TACG---GCTCCTAGAG------------A------------------------TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
..................ATTGAACT-ACC-TACG---GCTCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TG...........2211.0010100
...............................................................................................................................................AAAGTTTCAATTAGCA---A-GC-GA....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................TTGCCA----AGTC--TGATTATTCATG......................................................................................................................................................................................................................................2211.0011000
.............................................................................................................................................................................................................................................................................................................TG-AAAC--TCCTTGTTGT--GTCC-A.....................................................................................................................................................................................................................................................................2111.0011000
............................................................................................................................................................................................................................................................................................................................TTGT--GTCC-AAGTTTGCCA----AGT.....................................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTT------TAT------TTGT--GCG--------------AGT................................2111.0010001
.............................................................................................................................................................................................................................................................................................................................................................................ATTTGTT--CGCGCAGCTCGT--------TT.................................................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................TTTGCCA----AGTC--TGATTATTCA........................................................................................................................................................................................................................................2111.0010001
.....................................................................................TTGGGGTCTGTTT-------------TT---TTTG-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................AAGTTTCAATTAGCA---A-GC-GA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
........................................................................................................................................................................................................................................................................................................................CTTGTTGT--GTCC-AAGTTTGCCT----........................................................................................................................................................................................................................................................2211.0010001
.................................CG---GCTCCTAGAG------------A------------------------TTGGGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...........................................................................................................................................................................................................................................G---------------------------------------------GCAAT-----------TTTCTG-AAAC--TCCTTG.................................................................................................................................................................................................................................................................................2211.0011000
....................................................................................................................................................................................................T----TC--CCCTT-CC----------------CGGAATG---------------------------------------------GCAA................................................................................................................................................................................................................................................................................................................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------TTGT--GCG--------------AGTGTGTG-----------TT-TG...........2111.0011000
......................................................................................................................................................................................................................................................................................................................TCCTTGTTGT--GTCC-AAGTTTGC..............................................................................................................................................................................................................................................................2211.0010001
..............................................................................................................................................................................................................................................................................................................................GT--GTCC-AAGTTTGCCA----AGTC--..................................................................................................................................................................................................................................................2011.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-T--------------------------------TGCTTGGCC-CATTTATA........................................................................................2111.0010100
.........................................................................................................................................................................................................................................................................................................................................................................TTTTATTTGTT--CGCGCAGCT..............................................................................................................................................................................................................2011.0011000
...............................................................................................................................................................................................................................................................................................................................T--GTCC-AAGTTTGCCA----AGTC--TGA...............................................................................................................................................................................................................................................2211.0011000
...............................................................................................................................................................................................................................................................................................................................................................................TTGTT--CGCGCAGCTCGT--------TGGG...............................................................................................................................................................................................2111.0010001
.....................................................................................................................................................................................................................................................................................................................................................................TGTTTTTTATTTGTT--CGCG...................................................................................................................................................................................................................1911.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTGT--GCG--------------AGTGTGTG-----------TT-TGCT.........2220.5010001
dm3
C-AGATCGCCT-GGAAATATTGAACT-ACC-TACG---GCTCCTAGAG------------A------------------------TTGGGGTCTGTTTTCTTTTTTTTTT-TT---TTTG-GTTCCAATCA-----CT-ATA-AAAGTTTCAATTAGCA---A-GC-GACAGAG---GTA----------------A----CC--CCCTT-CC----------------CGGAATG---------------------------------------------GCAAT-----------TTTCTG-AAAC--TCCTTGCTGT--GTCC-AAGTCTGCCA----AGTC--TGATTATTCATGTTTTTTATTTGTT--CGCGCTGCTCGT--------TGGGTTTTATTTTC-TTGTT-----------GTA----TTTTTTTTTTTGTATTT-T--------------------------------TGCTTGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................TCAATTAGCA---A-GC-GACAGAG---G...........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTT--CGCGCTGCTCGT--------TGGGT..............................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.................................CG---GCTCCTAGAG------------A------------------------TTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GCG--------------AGTGTGTG-----------TT-TGCGG........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTT--CGCGCTGCTCGT--------TGG................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GTT--CGCGCTGCTCGT--------TGGGTT.............................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................G---GCTCCTAGAG------------A------------------------TTGGGGTCTGTTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GTTCCAATCA-----CT-ATA-AAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACC-TACG---GCTCCTAGAG------------A------------------------TTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCC-CATTTATGCATGACATTCTGT...........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TACG---GCTCCTAGAG------------A------------------------TTGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................GTA----------------A----CC--CCCTT-CC----------------CGGAATG---------------------------------------------G...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGAACT-ACC-TACG---GCTCCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAAT-----------TTTCTG-AAAC--TCCTTGCT...............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................GTA----------------A----CC--CCCTT-CC----------------CGGAATG---------------------------------------------T...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGCTGT--GTCC-AAGTCTGCCA----AG......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTT------TAT------TTGT--GCG--------------AGTGTGT............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------TTGT--GCG--------------AGTGTGTG-----------TT-.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................TT---TTTG-GTTCCAATCA-----CT-AT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------TTGT--GCG--------------AGTGTGTG-----------TT-.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GCG--------------AGTGTGTG-----------TT-TGCGGGA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ATTTGTT--CGCGCTGCTCGT--------TGGG...............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CATGTTTTTTATTTGTT--CGCGC..................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GCG--------------AGTGTGTG-----------TT-TGCGGG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................................CTGCCA----AGTC--TGATTATTCAT.......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....TCGCCT-GGAAATATTGAACT-ACC-TACG---GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TTTTATTTGTT--CGCGCTGCT..............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........T-GGAAATATTGAACT-ACC-TA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTGAACT-ACC-TACG---GCTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTGTT--CGCGCTGCTCGT--------TGGG...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------T...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TAT------TTGT--GCG--------------AGTGTGTG-----------T...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................TT--CGCGCTGCTCGT--------TGGGTTT............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................TTCAATTAGCA---A-GC-GACAGAG---GTA----------------.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AATATTGAACT-ACC-TACG---G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GCG--------------AGTGTGTG-----------TT-TGCG.........2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GCG--------------AGTGTGTG-----------TT-TGCGGT.......2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................GTT--CGCGCTGCTCGT--------TGCT...............................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CGT--------TGGGTTTTATTTTC-GA..................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
C-AGATCGCCCTG-AAATTATCAACT-T------------TCCTAGAG------------G------------------------TTGGGGTCTGTTT-------------------TTC-GGGCCAATCA-----CT-ATA-AAAGTTTCAATTAGCG---A-GC-GACAGAG---GTA----------------A----AC--CCCTA-CC-CC--GAAC--A---T-GGAATG---------------------------------------------GCAAT-----------TTTCTG-AAAC--TCCTTGTTGT--GCCC---GCTTGCCA----ACTC--AGATTATTCATGTTT-TTATTTGTT--CGCTCAGCTCGT--------TGGGTTTTATTTTC-CT-------------------------TTTTTTTGTATTTTT--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGC--GCG--------------AGTGTGTG-----------TT-TGCGAGAGAGTCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................ATTTGTT--CGCTCAGCTCGT--------TG.................................................................................................................................................................................................2115.0050000320
......................................................................................................................................................CAATTAGCG---A-GC-GACAGAG---GT..........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000100
........................................................................................................................................................ATTAGCG---A-GC-GACAGAG---GTA----------------A----....................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000200
................................................................................................................................................................................................................................................................................................................................................................................TGTT--CGCTCAGCTCGT--------TGG................................................................................................................................................................................................1911.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTT--------------------------------TGC-TGGCC-CATTTATG........................................................................................2111.0010000010
.......................................................................................................................................................AATTAGCG---A-GC-GACAGAG---GTT----------------.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
......................................................................................................................................................CAATTAGCG---A-GC-GACAGAG---G...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
......................................................................................................................................................................................................................................................................................................................................................................GTTT-TTATTTGTT--CGCTCAGC...............................................................................................................................................................................................................2111.0010000010
.....................................................................................................................................................TCAATTAGCG---A-GC-GACAGAG---G...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------TAT------TTGC--GCG--------------AGTGTGTG-----------T...............2111.0010000100
............................................................................................................................................................................................................................................................................................................................TTGT--GCCC---GCTTGCCA----ACTC--A.................................................................................................................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------AGTGTGTG-----------TT-TGCGAGAGAG...2111.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTG-----------TT-TGCGAGAG.....1811.0010010000
............................................................................................................................................................GCG---A-GC-GACAGAG---GTA----------------A----AC--CC..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------TAT------TTGC--GCG--------------AGTGTGTG-----------................2111.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC--GCG--------------AGTGTGTG-----------TT-TGCG.........2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTG-----------TT-TGCGAGAGAG...2011.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------TAT------TTGC--GCG--------------AGTGTG.............................1911.0010000010
.....................CAACT-T------------TCCTAGAG------------G------------------------TTGGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......................................................................................................................................................AATTAGCG---A-GC-GACAGAG---GTA----------------.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTT--CGCTCAGCTCGT--------TGG................................................................................................................................................................................................2111.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTT------TAT------TTGC--GCG--------------AGT................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTT------TAT------TTGC--GCG--------------AGTGT..............................2111.0010000100
............................................................................................................................................................................................................................................................................................................CTG-AAAC--TCCTTGTTGT--GCCC---....................................................................................................................................................................................................................................................................2111.0011000000
droYak3
C-AGATCGCCT-GGAAATTTTCAACT-ACC-TACA---GCTCCTAGAG------------G-----------------------TTTGAGGTCTGTTT-C----------GGTTCTGTTC-GGGCCAATCA-----CT-ATA-AAAGTTTCAATTAGCG---A-GC-GACTGAG---GTAA---AGAGG-----TAA----CC--CCCTA-TC-CC-------------CAGAATG---------------------------------------------GCAAT-----------TTTCTA-AAAC--TCCTTGTTGT--GCCC---GCTTGCCA----ACTC--AGATTATTCATGTTT-TTATTTGTT--CGCGCAGCTCGT--------TGGGTTTTATTTT--ATTTT------------CTTTTCTTTTTTTTTTTGTATTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................TAGCG---A-GC-GACTGAG---GTAA---.....................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000
...................TTCAACT-ACC-TACA---GCTCCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................TTTCAACT-ACC-TACA---GCTCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................GTAA---AGAGG-----TAA----CC--CCCTA-TC-.......................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEug1
G-AGATCGCCTAGGAAAATTTAATTTTACC-TAC--------CTAG--------------C------------------------TCGAGGTCTGTTT-------------TT-C-TTTC-GGTCCAATCA-----TT-ATA-AAATATTCAATTAGCG-C-A-GCTAACAGAG---GTAA---------TCTA--AGTACCTTGCCACT-CG----------------CCGAATG---------------------------------------------GCAAT-----------TTTCTA-GAAC--TCCTTGTTGC--CCCCGCCGTCTGCCA----ACTTTGAGATTATTCATGTTT-TTATTTGTT--CGCGCTGCTCGT--------TTGGTT-TATTTTA-AT-------------------------TTTTATTTTTTTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCGGTTA------TAT------TTGT--GCGATTGTGTGTGTGTGTGTGTGTG-----------TT-TGCGGGAGAGTCASizeHit CountTotal NormTotal
No Reads
droBia1
C-AGATCGCCTTGGAAAATTTCAGCT-ACC-AG---------CTAGCC------------A------------------------CAGAGCTCTGTTC------------------TGCC-GACCCAATCA-----CT-ATA-AAATATTCAATTAGCTGCAAGGC-CACAAAG---GTAA--------CTC----AG-------CCCAA-CC--CCTGTGT--G---TT--CTTG---------------------------------------------CCAAC-----------TTTCTGAAAAC--TCCTTGTTGC-TGCCC---CAGTGCCA---AACTC--TGATTATTCATTTTC-TTATTTGTT--CGCACAGCTCGT--------CTGGTTTTATTTCC-ATTTT---------TTCCA----AT-TTTTTATTTCATTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGCTG------TAT------TTGT--GCG--------------AGTGTGTG-----------TTTTGCGGGAGAGTCASizeHit CountTotal NormTotal
No Reads
droTak1
T-AGATCGGCCTGGAGAATTTCATCA-ACC-CACA----------------------------------------------------GGGGACTGTTT-------------T----TTTC-GACCCAATCA-----CT-ATA-AAATATTCAATTAGCTACGGAGC-TACAGAG---GTA----------------A----CC--CCCCT-CCCCC--CACCGCCTTTT-TGAAC----------------------------------------------CCAAT-----------TTTCTG-AAAC--TCCTTGTTGC-TGCCC---GTCTACCA----ACTC--TGATTATTCATTTTTTTTATTTGTT--CGCACAGCTCGC--------TTGGTTTTATTTCC-ATTTC---------GTTCA----TTTTATTTTTTGTATTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCTGGTT------TAT------TTGT--GCG--------------AGTATGTG-----------TT-TGCGGGAGAGTCASizeHit CountTotal NormTotal
No Reads
droEle1
G-GGATCGCCTAGGAAAATTTCATAT-ACC-------------------------------------------------------TCGGGGTCTGTTT-------------TTACATTTC-GGGCCAATCA-----CT-ATA-AAATATTCAATTAGCG---A-GC-AACAGAAACAGTG--------------AAA----CT--TC------------------------------------------------------------------------------G------------TTCCG-AAAC--TCCTTGTT----GCCC---GTCTGCCA----ACTC--AGATTATTCATGTTT-TTATTTGCT--CGCCCAGCTCGT--------TTGGTTTTATTTTC-ATTTT-CATTTTCATTTTA----AT---TTTTTTTTTTTT-T--------------------------------TGT-TGGCC-CATTTATGCATGACATTCTGTGC------------------T--GTG--------------AGTGTGTG-----------TTTTGCGGGAGAGTCASizeHit CountTotal NormTotal
No Reads
droRho1
C-GGATCGCCTAGGAAAATTTCATAT-ACC-------------------------------------------------------TCGAAGTCTGTTT-------------TT---TTTC-GGGCCAATCA-----CT-ATA-AAATATTCAATTAGCG---A-GC-GACAGAG---GTA--------------TAA----CC--CC------------------------------------------------------------------------------T-----------TTTC-A-AAAC--TCCTTGTT----CCCC---GTCTGCCA----ACTC--AGATTATTCATGTTTTTTATTTGTT--CGCGCTGCTCGT--------TTGGTTTTATTTTC-ATTTT------------AA-----T--TTTAATTTTTTTT-T--------------------------------TGC-TGGCC-CATTTATGCATGACATTCGGTTT------TAT------TTGT--GCG--------------AGTGTGTG-----------TT-TGCGGGAGAGTCASizeHit CountTotal NormTotal
No Reads
droFic1
G-GAATCGCCTAGGAAAATTTCACTC-ACC-TACG---GCTCCTGAAGCTCCAAGTCGAAG------------------------TCGAAATCTGTTT-------------TT---TTTCGGGCCCAATCA-----CT-ATA-AAATATTCAATTAGCC---A-GCTGGCAGAG---GTAC--------CTA----A----A---CCCTAACC--C-----------------------------------------------------------------------GCTTTGTTTGTTTGTA-GAAC--TCCTT-------------------CGAAAAAACTC--TGATTATTCATGTTT-TTATTTGTT--CGCGCAACTCGT--------TTGGTTTTATTTTC-ATTTT------------CATTTCAT---TTTTTTATTTTT-T--------------------------------TTC-TGGCC-CATTTATGCATGACATTCCGTTTC-----AAG------TTGC--GCG--------------AGTGTGAG-----------TTTTGCGGGAGAGTCASizeHit CountTotal NormTotal
No Reads
droKik1
G-AGATCGCCTTGGAAAATTTCAGCT-GCC-TGC-------CTTAA--------------------------------------------------------------------------------AAACAGCCGTCT-ATA-AAATATTCAATTAGCCA--GGGC-GAAAG------TGAGGGAAAGG-----TAA----CC--CCC-------C--GAGT--A---TTGAAATG---------------------------------------------GCACT-----------TTTCAG-AAACTCTCCTTG---------------------------TC--GGATTATTCATGTTT-TTATTTGTT--CGCGCAGCTCAT--------TTGGTTTTATTTTCCATTTTTCGTTGT-----GA-----------TTTTGTATTTTTT---------------------GTTATTTGCTGGC-TGGCC-CATTTATGCATGACATTCTGTTC------AGT------GTGTGCGCG--------------AGTGTGTG-----------TT-T--GGGAGAGTCASizeHit CountTotal NormTotal
No Reads
droAna3
C-CGATCTTATTGGAAAATTTCAACC-ACC-AAAG---GCC-----------------------------------------TGCCTAAGGTCTGTTT---------------------T-AGACCAATTA-----CT-ATA-AAATATTCAATTAGCA-C-------AGAGAG---GTA----------------A----CC--CC-TA-CT-TC--TACT-----------------------------------------------------------ATAAG-----------TTACTG-AAAC--TCCTTTCT----GTCC---GGCTGCCA----AGAT--AGATTCTTCGTGTTT-TTATTT-TT--CGCATTATTCGT--------TTTGGTTTATT-------------------------------------CGTATTTTT--------------------------------TAC-TGGCC-CATTTATGCATGACATTCTGTAT------TGTTTCGGGTCGAGAACG--------------AGTGTGTGT------TG---T-ATTGGGAGAGTCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTAT------TGTTTCGGGTCGA......................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGTCGAGAACG--------------AGTGTGT............................2111.001000010
..........................................................................................................................................................TAGCA-C-------AGAGAG---GTA----------------A----CC--CC-T............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGAACG--------------AGTGTGTG...........................1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................ATTCGT--------TTTGGTTTATT-------------------------------------CGT................................................................................................................................................2011.001010000
droBip1
CCGGATCGTATTGGAAAATTTCAACC-ACC-TAAG---C------------------------------TTGCCTGCCTGCCTGCCTGAGGTCTGTT---------------------TC-AGACCAATCA-----CT-ATA-AAATATTCAATTAACA-C-------AGAGAG---GTA----------------A----CC--CTT-------C--TACG--A---TGAGAATA---------------------------------------------CGACG-----------TTACTGAAAAC--TCCTTTCTGTCCGTCC---GGCTGTCA----AGTT--AGATTATTCATGTTTTTTAGTCGTT--TTCG------------------GGTTTTGT-------------------------------------TCGTATTTTT--------------------------------TAC-TGGCC-CATTTATGCATGACATTCTGTTC------GAG------CTCT---CG--------------AGTGTGTGTCGTTTGTGTAT----TGGGAGAGTCASizeHit CountTotal NormTotal
No Reads
dp5
T---ATTGCCTTGGAAAATTCTA-CC-AGCGT------------AGA------------AGGAAACGTCTTGCCC-TCTGCCGGACCCTGGTCTGTT---------------------TC-GAACTATACA-----CTCATAAAAATATTCAATTAGTG----------GAAAG---GTAC---------TCT----GCA----------------------------CTAGAATCCACCACCACTCCCCCTTCAACTCCAACTCCTTTGGAGTGGATCAGCCAACTGATTTGGTTAT---------------TTGTC----GTCT---GTCTGCCA----CC------ATTATTCATATTTT--ATTTTTT-TTCTGTT--TCGGTTTCGGATTGCGTTTCAT-------TTC---------ACTTA----TT---TTTTTTTTCTGT-T--------------------------------TGCTTGGCCCCTTTTCTGGATGACATTCTCTGTGTGTTTTCT------TGGT--GTG--------------TGTGTGTA-----------TT----AGGAGAGTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGACATTCTCTGTGTG......................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................TGGAGTGGATCAGCCAAC...............................................................................................................................................................................................................................................................................................................1811.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TGGT--GTG--------------TGTGTGTA-----------TT----AGGT......2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................TGTT--TCGGTTTCGGATTGCG...............................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTTTTCTGGATGACATTCTCTGT.........................................................................2611.0010100000000
droPer2
T---ATTGCCTTGGAAAATTCTA-CC-AGCGT------------AGA------------AGGAAACGTCTTGCCC-TCTGCCGGACCCTGGTCTGTT---------------------TC-GAACTATACA-----CTCATAAAAATATTCAATTAGTG----------GAAAG---GTAC---------TCT----GCA----------------------------CTAGAATCCACCACCACTCCCCCTTCAACTCCAACTCCTTTGGAGTGGATCAGCCAACTGATTTGGTTAT---------------TTGTC----GTCT---GTCTGCCA----CC------ATTATTCATATTTT--ATTTTTTTTTCTGTT--TCGGTTTCGGATTGCGTTTCAT-------TTC---------ACTTA----TT--TTTTTTTTTCTGT-T--------------------------------TGCTTGGCCCCTTTTATGGATGACATTCTCTGTGTGTTTTCT------TGGT--GTG--------------TGTGTGTA-----------TT----AGGAGAGTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................CAACTGATTTGGTTAT---------------TTGTC----...........................................................................................................................................................................................................................................................................2111.001010000
droWil2
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCA----AATG--TGATTATTCATGTTT-CTATTTGTT--G----------------------------------------------------------------TTTT-------GTACTGAGGCGCGGAGGAGTATC----------TAC-ATATG-TATGTATG--TGAGA-GGGGTCT------TAT------TTGT--TTG----TG--TTTGTATGTGTATG-----------AT-T-GGCAACAGTCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/19/2015 at 04:18 AM