ID:

dsi_1063

 Coordinate:

3l:21488844-21488960 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3l_21488961_21489186_+]; CDS [3l_21488961_21489186_+]; exon [3l_21488586_21488843_+]; CDS [3l_21488586_21488843_+]; intron [3l_21488844_21488960_+]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------##################################################
TGGTCAAGGAGGCGCTGGCCACCGTTGGAGCGGAGCTCGCTGTCTCACTGGTGAGATCGATTGGGATTAAGACAAGATAACTCGTTTTTGTTTAAAATAACTTCAAACTTTTATACTTGATTATGAATATGACTTATATTTCAATTAATTTTGCTTTTCCATTAAAGGTTTCCACGCGCGAGGAGATCAGTGATCTGCTGTCCATGGAGAACCACAT
**************************************************(((((((.(((((((((((((((((((........))))))...........(((....((((((......))))))..))))))).))))))))).))))))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 M023
head
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...................CACCGTTGGAGCGGAGCTCGCTGTCT............................................................................................................................................................................ 26 0 1 3.00 3 0 2 1 0 0 0 0 0 0
..................CCACCGTTGGAGCGGAGCTCGCTGTC............................................................................................................................................................................. 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................GTGATCTGCTGTCCATGGA......... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................AGCGGAGCTCGCTGTCTC........................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................AGATCAGTGATCTGCTGTCCATGGA......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GTTTCCACGCGCGAGGAGATCAGTG......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................GGCCACCGTTGGAGCGGAGCTCGCTGTCT............................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................CTGCTGTCCATGGAGAACCAC.. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................CACCGTTGGAGCGGAGCTCGCT................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................TCAGTGATCTGCTGTCCATGGA......... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGCGCGAGGAGATCAGTGATCTG.................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............GCTGGCCACCGTTGGAGC.......................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................TGGAGCGGAGCTCGCTGTCTCACTGGT..................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATCAGTGATCTGCTGTCCA............. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.......GGAGGCGCTGGCCACCGTTGGAGC.......................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................TTGGAGCGGAGCTCGCTGTC............................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...TCAAGGAGGCGCTGGCCACCGTTGGAGC.......................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................GTTGGAGCGGAGCTCGCTGTCC............................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................GGAGCTCGCTGTCTCACTGGGTT................................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GATCTGCTGTCCATGGAGA....... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................CCGTCTCACTGGTGAG.................................................................................................................................................................. 16 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.............GCTGGCCACCGTTGGAGCGGAGCT.................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................CACCGTTGGAGCGGAGCTCGCTGT.............................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................GTTTCCACGCGCGAGGAGATCAGTGAT....................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGCTGTCCATGGAGAACC.... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................CCGTCTCACTGGTGAAA................................................................................................................................................................. 17 2 7 0.71 5 0 0 0 5 0 0 0 0 0
....................................................................................................................................................................CTGGTTTCCACGCGCGAGGA................................. 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................GGTTTCCCCGCGCGA.................................... 15 1 3 0.33 1 0 0 0 0 0 0 1 0 0
.........................................GTCTCACTGGTGAAA................................................................................................................................................................. 15 1 5 0.20 1 0 0 0 1 0 0 0 0 0
.......................................................................ACAAGATCACTCGTT................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 1 0 0
........................................CGTCTCACTGGTGAGAA................................................................................................................................................................ 17 2 7 0.14 1 0 0 0 1 0 0 0 0 0
...........................................................................GCTAACTCGTTTTTG............................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................GTTTCCACCCGCAAGGA................................. 17 2 19 0.05 1 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................GGTTTCCCCGCGAGA.................................... 15 2 20 0.05 1 0 0 0 0 0 0 0 0 1
.......................................CCGTCTCACTGGTGAAAGC............................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0
........................................CGTCTCACTGGTGAAA................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

ACCAGTTCCTCCGCGACCGGTGGCAACCTCGCCTCGAGCGACAGAGTGACCACTCTAGCTAACCCTAATTCTGTTCTATTGAGCAAAAACAAATTTTATTGAAGTTTGAAAATATGAACTAATACTTATACTGAATATAAAGTTAATTAAAACGAAAAGGTAATTTCCAAAGGTGCGCGCTCCTCTAGTCACTAGACGACAGGTACCTCTTGGTGTA
**************************************************(((((((.(((((((((((((((((((........))))))...........(((....((((((......))))))..))))))).))))))))).))))))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
........................................ACAGAGTGACCACTGT................................................................................................................................................................. 16 1 1 1.00 1 1 0 0 0 0
.................................TCGACGGACAGAGTGACCACTTT................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0 0
........................................ACAGAGTGACCACTTT................................................................................................................................................................. 16 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................AGGTACCTCTTGGTG.. 15 0 2 0.50 1 0 1 0 0 0
.....................................GCGGCAGAGTGACCACTT.................................................................................................................................................................. 18 2 2 0.50 1 1 0 0 0 0
.......................................GGCAGAGTGACCACTTT................................................................................................................................................................. 17 2 7 0.43 3 3 0 0 0 0
.........................................TAGAGTGACCACTCT................................................................................................................................................................. 15 1 3 0.33 1 1 0 0 0 0
..................................................................AAGTCTGTTCTATTGTGCACA.................................................................................................................................. 21 3 3 0.33 1 0 0 1 0 0
........................................GCAGAGTGACCACTTT................................................................................................................................................................. 16 2 20 0.25 5 5 0 0 0 0
................................................ACCACTCTAGGTAACC......................................................................................................................................................... 16 1 5 0.20 1 0 0 0 1 0
........................................................................................................................................................................AAAGGTGCGCGCGCC.................................. 15 1 6 0.17 1 0 0 0 0 1
..........................................................................................AAATTTTATTGAAGT................................................................................................................ 15 0 6 0.17 1 1 0 0 0 0
....................................ACGGACAGAGTGACCACTTT................................................................................................................................................................. 20 3 12 0.08 1 1 0 0 0 0
........................................................................................................................................................................................................AGGTACGTCTTGGTG.. 15 1 14 0.07 1 0 1 0 0 0
..................................................................................................................................................................................................GACGACAGGGATATCTTGG.... 19 3 16 0.06 1 1 0 0 0 0
.................................................................................................................................................................................................AGGCGACAGGTACCT......... 15 1 19 0.05 1 0 1 0 0 0
.......................................GACAGAGTGCTGACTCTA................................................................................................................................................................ 18 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:21488794-21489010 + dsi_1063 TGGTCAAGGAGGCGCTGGCCACCGTTGGAGCGGAGCTCGCTGTCTCACTGGTGAGATC----------GAT------------TGGGATTAAGACAAGATAACTCGTTTTTGTTTAA--AATAACTTCAAACTTTTATA---------------------------------------------------------------------CTTGA---------TT---------ATGAATATGACTTATATTTCAATTAA-------------TTTTGCTT-TTCC-ATTAAAGGTTTCCACGCGCGAGGAGATCAGTGATCTGCTGTCCATGGAGAACCACAT
droSec2 scaffold_11:1899189-1899394 + TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCTGTCTCACTGGTGAGATC----------GAG------------AGAGAT-----------AACTCGTTTTTGTTTAA--AATAACTTCAAACTTATATA---------------------------------------------------------------------ATTAA---------TT---------ATGAATATGACTTATATTTCAATTAA-------------TTTTGCTT-TTCC-ATAAAAGGTTTCCACGCGCGAGGAGATCAGTGATCTGCTGTCCATGGAGAACCACAT
dm3 chr3L:21973612-21973781 + TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCACTGGTGAGTTC----------GAT------------TGGGAC-------------------------------------------------A---------------------------------------------------------------------CATGA---------TG---------ATGAACGTGACTTATATTTCAATTAA-------------TTTTGCTT-CTCC-ATTAAAGGTTTCCACGCGCGAGGAGATCAGCGATCTGCTGTCCATGGAGAACCACAT
droEre2 scaffold_4784:21648350-21648564 + der_880 TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCACTGGTGAGTTC----------AGT------------TGGGACTGAGACAAAGGCAGTCGTTTATGTCTGC--TTAAGCTTCGAATTAGAACTATTAGTGTTA------------ACA-----------------TTTCGCA---------------------------------------------AGAT----------------CTTTGAGG------------TTTGCTT-CTGC-TTTAAAGGTTTCCACGCGCGAGGAGATCAGCGATCTGCTGTCCATGGAGAACCACAT
droYak3 3L:22301074-22301183 + TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCACTAGTGAGTTT----------AAT------------TTGTATTAGGACA---------GTTTAAGTTGAA--AACA-----------------------------------------------------------------AGAGAAACCGCTATA-----GTTGA----------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409472:809186-809410 + TGGTCAAGGAGGCATTGGCCACCGTAGGAGCAGAGCATGCTGTGTCCCTGGTGAGTTC----------AGT------------TTGAATTGAGCT------------TTATTTTGAC---------------------------------AT-----------G-----------------TTTAATAAGGAAGACTGTTCCA------TTGAATATTGGGTTGATGCACATTGAACATTTTGCGAA---TTCCATTAACG------------TTGGATC-ATCC-ACTTCAGGTTTCCACGCGCGAGGAAATCAGTGACCTGCTGTCCATGGAGAACCACAT
droBia1 scf7180000302377:1310400-1310468 - TTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CT-CCCC-ATTTAAGGTCTCCACGCGCGAGGAGATCAGCGACCTGCTGTCCATGGAGAACCACAT
droTak1 scf7180000414002:122285-122357 + TAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCTTTCCCC-ATTAAAGGTTTCTACGCGCGAGGAGATCAGCGACCTGCTGTCCATGGAGAACCACAT
droEle1 scf7180000491199:861627-861711 - TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCCCTGGTGAGTATA--CGTTGGTGCG------------TTGGGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCCAAGA
droRho1 scf7180000759602:23562-23663 + TTTTTAAT-----------------------------------------------------------------------------------------------------------------------------------------TTAAATTATATAGAAAA--------------------------------------------------------------------------T----------------GTTTAACT------------TTGAGTT-CTCT-ATTAAAGGTTTCTACGCGCGAGGAGATAAGCGACCTGCTCTCCATGGAGAACCACAT
droFic1 scf7180000453945:129818-129974 + TGGTCAAGGAGGCGCTGGCCACCGTTGGAGCGGAGCACGCCGTGTCACTGGTGAGACT----------GAT------------TTGGATAAGGCTAAGATAAACTGATTATGGCTACATTTAAAAAACACTTAAGA--AGTTATCCATA------------GC----------------------------------------ACTTT------------------------------TC-----AGA--GTGCTCTAAAG------------TTTAATT-AA------------------------------------------------------------
droKik1 scf7180000302441:2089394-2089553 - TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCCGAGCATGCCGTGTCACTGGTGAGTGTCCTTTAGACGGAA------------G---------------------------------------------------------------AATATTTATAGAGCT--------------------------------------------------------------------------T----------------ACTTAA--CTC---------ATG------ACC-TTAAAAGGTCTCCACCCGCGAGGAGATTAGCGATTTGCTATCCATGGAGAACCACAT
droAna3 scaffold_13337:21107885-21107978 + ATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGATTCAACCAAGTTATTAATAAT-------------TATTA-----TTT-TTCCAAGGTTTCCACGCGAGAGGAGATCAGCGACCTGTTGTCCATGGAAAACCACAT
droBip1 scf7180000396707:322450-322555 - ATTA-----------------------------------------------------T--------------------------------------------------------TAC--T-------------------------ATAACATCTACTATAAAAG-----------------TTTAATA---------------------------------------------AAAAATT--------------------------------TTTT------GCT-TTCCAAGGTTTCCACGCGCGAGGAGATCAGCGACCTGTTGTCTATGGAAAACCACAT
dp5 XR_group8:6047212-6047262 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTCCACGCGCGAGGAGATTAGCGATCTGCTGTCAATGGAGAAGCACAT
droPer2 scaffold_45:436832-436882 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTCCACGCGCGAGGAGATTAGCGATCTGCTGTCAATGGAGAAGCACAT
droWil2 scf2_1100000004762:1841194-1841360 - TGGTTAAGGAGGCATTGACCAGCGTTGGTGCCGAACATGCAGTATCCTTAGTGAGTGA----------ACA------------AAAAAT-----------ATCCCA-----------------------------------------------------------------TTTGATTTGA----------------------TCTTT------------------------------TA-----TGA--TTGCATTAACA-----------------TT-CTTT-TTCTTAGGTTTCTACTCGCGAGGAAATCAGCGATCTGCTGTCCATGGAAAATCACAT
droVir3 scaffold_13049:20942013-20942173 + TGGTCAAGGAGGCGCTGAGCAGCGTGGGTGCCGATCATGCCGTGTCCCTGGTGCGTAC----------TAGTAATCCTCTCTTTTGCATGAGGGTA-----------------------------------------------------------------ACATTTGCCAAT-----------------------------------------------------------------------------------------------------TG------ACCTTCAATAGGTTTCAACACGCGAGGAGATCAGCGACTTGCTGTCCATGGAAAAGCACAT
droMoj3 scaffold_6680:15295479-15295650 + TGGTCAAGGAGGCGCTCGGCAGCGTGGGCGCCGAGCATGCAGTTTCCCTGGTGAGCCA------------------------------------------------------------------CGACAGTCAACT--AGCTGTTGAGA------------GA----------------------------------------TGCCT------------------------------TT-----GGC--TTGGTCTGAGT-----------TTTTG-TT-TATT-TCAACAGGTTTCCACACGCGAGGAAATCAGCGATTTGCTGGCTATGGAGAATCACAT
droGri2 scaffold_1930:139-302 + TGGTCAAGGAGGCGCTGACCAGTGTGGGTGCCGAGCATGCCGTGTCCCTCGTGAGTAA---TAATGCAGCA------------GTAAGTT---------------------------------------------------------------------AATAG--------------------------------------------------------------------------CCCA------------GTTAA--CACATTGTAATTGCC------ATT-TTTATAGGTTTCCACTCGCGAGGAGATAAGCGATTTGCTGGCAATGGAGAGTCACAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGTCAAGGAGGCGCTGGCCACCGTTGGAGCGGAGCTCGCTGTCTCACTGGTGAGATC----------GAT------------TGGGATTAAGACAAGATAACTCGTTTTTGTTTAA--AATAACTTCAAACTTTTATA---------------------------------------------------------------------CTTGA---------TT---------ATGAATATGACTTATATTTCAATTAA-------------TTTTGCTT-TTCC-ATTAAAGGTTTCCACGCGCGAGGAGATCAGTGATCTGCTGTCCATGGAGAACCACATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................CACCGTTGGAGCGGAGCTCGCTGTCT..........................................................................................................................................................................................................................................................................................................2613.00302100000000000000
..................CCACCGTTGGAGCGGAGCTCGCTGTC...........................................................................................................................................................................................................................................................................................................2612.00200200000000000000
...........................................................................................................................................................................................................................................................................................................................GTGATCTGCTGTCCATGGA.........1911.00100010000000000000
............................AGCGGAGCTCGCTGTCTC.........................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................AGATCAGTGATCTGCTGTCCATGGA.........2511.00100010000000000000
.....................................................................................................................................................................................................................................................................................................GTTTCCACGCGCGAGGAGATCAGTG.........................2511.00100010000000000000
................GGCCACCGTTGGAGCGGAGCTCGCTGTCT..........................................................................................................................................................................................................................................................................................................2911.00101000000000000000
................................................................................................................................................................................................................................................................................................................................CTGCTGTCCATGGAGAACCAC..2111.00101000000000000000
...................CACCGTTGGAGCGGAGCTCGCT..............................................................................................................................................................................................................................................................................................................2211.00101000000000000000
........................................................................................................................................................................................................................................................................................................................TCAGTGATCTGCTGTCCATGGA.........2211.00100010000000000000
............................................................................................................................................................................................................................................................................................................CGCGCGAGGAGATCAGTGATCTG....................2311.00100010000000000000
.............GCTGGCCACCGTTGGAGC........................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.........................TGGAGCGGAGCTCGCTGTCTCACTGGT...................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................ATCAGTGATCTGCTGTCCA.............1911.00100001000000000000
.......GGAGGCGCTGGCCACCGTTGGAGC........................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
........................TTGGAGCGGAGCTCGCTGTC...........................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...TCAAGGAGGCGCTGGCCACCGTTGGAGC........................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.......................GTTGGAGCGGAGCTCGCTGTCC..........................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................GGAGCTCGCTGTCTCACTGGGTT.................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGA.......1911.00100010000000000000
.............GCTGGCCACCGTTGGAGCGGAGCT..................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...................CACCGTTGGAGCGGAGCTCGCTGT............................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.....................................................................................................................................................................................................................................................................................................GTTTCCACGCGCGAGGAGATCAGTGAT.......................2711.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................TGCTGTCCATGGAGAACC....1811.00101000000000000000
droSec2
TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCTGTCTCACTGGTGAGATC----------GAG------------AGAGAT-----------AACTCGTTTTTGTTTAA--AATAACTTCAAACTTATATA---------------------------------------------------------------------ATTAA---------TT---------ATGAATATGACTTATATTTCAATTAA-------------TTTTGCTT-TTCC-ATAAAAGGTTTCCACGCGCGAGGAGATCAGTGATCTGCTGTCCATGGAGAACCACATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....CAAGGAGGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2714.0040220
.........................................................................................................................................................................................................................................................................................................CCACGCGCGAGGAGATCAGT..........................2013.0030300
....CAAGGAGGCGCTGGCCACCGTGGG...........................................................................................................................................................................................................................................................................................................................2412.0020110
..............CTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2012.0020011
.....AAGGAGGCGCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2911.0010100
...........GCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................1811.0010010
...................CACCGTGGGAGCGGAGCACGCT..............................................................................................................................................................................................................................................................................................................2211.0011000
...................................................TGAGATC----------GAG------------AGAGAT-----------AACTCGTT...........................................................................................................................................................................................................................................2411.0010100
..........................GGAGCGGAGCACGCTGTCTC.........................................................................................................................................................................................................................................................................................................2011.0010010
.......................................................................................................................................................................................................................................................................................................................ATCAGTGATCTGCTGTCCATGGAGAAT.....2711.0010100
.GGTCAAGGAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2811.0010010
............................................................................................................................................................................................................................................................................................................CGCGCGAGGAGATCAGTGATCTG....................2311.0010001
...........GCGCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2311.0011000
......................................................................................................................................................................................................................................................................................................................GATCAGTGATCTGCTGTCCATG...........2211.0011000
.............GCTGGCCACCGTGGGAGCGGAGCACG................................................................................................................................................................................................................................................................................................................2611.0011000
................GGCCACCGTGGGAGCGGAGCACGCT..............................................................................................................................................................................................................................................................................................................2511.0011000
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGAACCAC..2411.0011000
................................................................................................................................................................................................................................................................................................................................CTGCTGTCCATGGAGAACCAC..2111.0010100
.....AAGGAGGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2611.0010100
............CGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................1911.0010100
............CGCTGGCCACCGTGGGAGCGGAGCACG................................................................................................................................................................................................................................................................................................................2711.0010100
.............GCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2111.0010001
..............CTGGCCACCGTGGGAGCGG......................................................................................................................................................................................................................................................................................................................1911.0010010
...........GCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2011.0010001
................................................................................................................................................................................................................................................................................................................................CTGCTGTCCATGGAGAACC....1911.0010001
dm3
TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCACTGGTGAGTTC----------GAT------------TGGGAC-------------------------------------------------A---------------------------------------------------------------------CATGA---------TG---------ATGAACGTGACTTATATTTCAATTAA-------------TTTTGCTT-CTCC-ATTAAAGGTTTCCACGCGCGAGGAGATCAGCGATCTGCTGTCCATGGAGAACCACATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................CGCGCGAGGAGATCAGCGAT.......................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GAGGAGATCAGCGATCTGCT..................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000002000000
..............CTGGCCACCGTGGGAGCGGAGCACGC...............................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGAACCAC..2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGAGGAGATCAGCGATCTGC...................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................CACCGTGGGAGCGGAGCACGCC..............................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................ACGCGCGAGGAGATCAGC..........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............CGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CCACGCGCGAGGAGATCAGC..........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................GTTTCCACGCGCGAGGAGATC.............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
.....AAGGAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............CGCTGGCCACCGTGGGAGCGG......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................ACGCGCGAGGAGATCAGCGATCTGC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TTTCCACGCGCGAGGAGATC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TGCTGTCCATGGAGAACC....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GGAGATCAGCGATCTGCTGT................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GGTTTCCACGCGCGAGGAGATC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................GCACGCCGTGTCACTGGT...................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............CTGGCCACCGTGGGAGCGG......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................GGAGCACGCCGTGTCACTG.....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGAGGCGCTGGCCACCGTGGGAGCG.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGTGGGAGCGGAGCACGCCGTGTCACT......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AGATCAGCGATCTGCTGTCCATGGA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGGAGCGGAGCACGCCGTGTCACTG.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCCACCGTGGGAGCGGAGC...................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CCACGCGCGAGGAGATCAGCG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTCCACGCGCGAGGAGATC.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TGCTGTCCATGGAGAACCACC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................GTGGGAGCGGAGCACGCCGTGTC.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............GCTGGCCACCGTGGGAGCGG......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....CAAGGAGGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................ACCGTGGGAGCGGAGCACGCCG.............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................GCTGTCCATGGAGAACCAC..1911.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTCAAGGAGGCGCTGGCCACCG...............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................CACCGTGGGAGCGGAGCAC.................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGCCACCGTGGGAGCGGAGC...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAGGAGGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................TTCCACGCGCGAGGAGATCAGC..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGAGGAGATCAGCGATCTGCTGTCC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGCCACCGTGGGAGCGGAGCACGCC..............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CGCGCGAGGAGATCAGCGATCTGC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................GAGCACGCCGTGTCACTG.....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGCGATCTGCTGTCCATGGAGA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGTCAAGGAGGCGCTGGCC...................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ACGCGCGAGGAGATCAGCGATC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCGCGAGGAGATCAGCGATCT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTGGGAGCGGAGCACGCCGTGTCAC.......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGCGATCTGCTGTCCATG...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CGCGAGGAGATCAGCGATC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CTGCTGTCCATGGAGAACCACA.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
......................CGTGGGAGCGGAGCACGC...............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGAACCACAT2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGCACGCCGTGTCACTGGT...................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGAGGAGATCAGCGATCTGCT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................CCACCGTGGGAGCGGAGCA..................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAGCACGCCGTGTCACTGGT...................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGTGGGAGCGGAGCACGCCGTGTCA........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................GTGGGAGCGGAGCACGCCGTGTCACT......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCGAGGAGATCAGCGATCT.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.GGTCAAGGAGGCGCTGGC....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..GTCAAGGAGGCGCTGGC....................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TG---------ATGAACGTGACTTATATGC...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGCGATCTGCTGTCCATGGAGAA......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GCGATCTGCTGTCCATGGA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGA.........1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCACGCCGTGTCACTGGTTT.................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCACTGGTGAGTTC----------AGT------------TGGGACTGAGACAAAGGCAGTCGTTTATGTCTGC--TTAAGCTTCGAATTAGAACTATTAGTGTTA------------ACA-----------------TTTCGCA---------------------------------------------AGAT----------------CTTTGAGG------------TTTGCTT-CTGC-TTTAAAGGTTTCCACGCGCGAGGAGATCAGCGATCTGCTGTCCATGGAGAACCACATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....CAAGGAGGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2714.0040000220
................................................................................................................................................................................................................................................................................................................................CTGCTGTCCATGGAGAACCACAT2313.0031000200
.GGTCAAGGAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2813.0030000120
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGAACCACA.2512.0020000200
....................................................................................................................................................A------------ACA-----------------TTTCGCA---------------------------------------------AGAT----------------CTTTGAGG------------T.....................................................................2412.0020000110
.............GCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2112.0021000100
.............GCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................1812.0020000020
...............................................................................................................................................................................................................................................................................................................GCGAGGAGATCAGCGATCT.....................1911.0010000010
.....................................................................................................................................................................................................................................................................................................................AGATCAGCGATCTGCTGTCCATGGAGA.......2711.0010000010
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGAAC.....2111.0010000010
..GTCAAGGAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2711.0010000100
...........................................................................................................................................................................................................................................................................................................................GCGATCTGCTGTCCATGGA.........1911.0010000010
....CAAGGAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2511.0010000100
....CAAGGAGGCGCTGGCCACCGTGG............................................................................................................................................................................................................................................................................................................................2311.0010000010
..GTCAAGGAGGCGCTGGCCACCGTGGGG..........................................................................................................................................................................................................................................................................................................................2711.0010000100
................................................................................................................................................................................................................................................................................................................................CTGCTGTCCATGGAGAACCA...2011.0010000100
................GGCCACCGTGGGAGCGGAG....................................................................................................................................................................................................................................................................................................................1911.0010000010
..........................................................................................................................................................................................................................................................................................................CACGCGCGAGGAGATCAGCGATCTGC...................2611.0010000010
...........................................................................................................................................................................................................................................................................................................................GCGATCTGCTGTCCATGGAG........2011.0010000010
.........................................................................................................................................................................................................................................................................................................................CAGCGATCTGCTGTCCATGGAGAAC.....2511.0011000000
................................GAGCACGCCGTGTCACTGGT...................................................................................................................................................................................................................................................................................................2011.0011000000
..................................GCACGCCGTGTCACTGGTTT.................................................................................................................................................................................................................................................................................................2011.0010100000
.....................................................................................................................................................................................................................................................................................................................AGATCAGCGATCTGCTGTC...............1911.0011000000
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGAACC....2211.0010100000
......................................................................................................................................................................................................................................................................................................TTTCCACGCGCGAGGAGATCAGC..........................2311.0010000010
....................................................................................................................................................................................................................................................................................................GGTTTCCACGCGCGAGGAGAT..............................2111.0010000010
...........................................................................................................................................................................................................................................AT----------------CTTTGAGG------------TTTGCTT-CTG...........................................................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................ATCAGCGATCTGCTGTCCATGGA.........2311.0010000100
.................................AGCACGCCGTGTCACTGGT...................................................................................................................................................................................................................................................................................................1911.0010000100
.......................GTGGGAGCGGAGCACGCCGT............................................................................................................................................................................................................................................................................................................2011.0010000010
...........GCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2011.0010000010
...............................GGAGCACGCCGTGTCACTGGTTT.................................................................................................................................................................................................................................................................................................2311.0010000100
.....................................................................................................................................................................................................................................................................................................GTTTCCACGCGCGAGGAGATCAGC..........................2411.0010000100
....CAAGGAGGCGCTGGCCACCGTGGG...........................................................................................................................................................................................................................................................................................................................2411.0010000100
..............................CGGAGCACGCCGTGTCACTG.....................................................................................................................................................................................................................................................................................................2011.0010000100
.......................GTGGGAGCGGAGCACGCCGTGTC.........................................................................................................................................................................................................................................................................................................2311.0010000100
TGGTCAAGGAGGCGCTGGC....................................................................................................................................................................................................................................................................................................................................1911.0010000010
....................ACCGTGGGAGCGGAGCACGCCGTG...........................................................................................................................................................................................................................................................................................................2411.0010000100
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAGAA......2011.0010000010
....................ACCGTGGGAGCGGAGCACG................................................................................................................................................................................................................................................................................................................1911.0011000000
...................CACCGTGGGAGCGGAGCACGCCGTGTC.........................................................................................................................................................................................................................................................................................................2711.0010000010
.................................................................................................................................................................................................................................................................................................................................TGCTGTCCATGGAGAACCACAT2211.0011000000
.GGTCAAGGAGGCGCTGGC....................................................................................................................................................................................................................................................................................................................................1811.0010000100
..........................................................................................................................................................................................................................................................................................................CACGCGCGAGGAGATCAGC..........................1911.0010010000
droYak3
TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCACTAGTGAGTTT----------AAT------------TTGTATTAGGACA---------GTTTAAGTTGAA--AACA-----------------------------------------------------------------AGAGAAACCGCTATA-----GTTGA----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............GCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2121.50301000020000
...................CACCGTGGGAGCGGAGCACGCC..............................................................................................................................................................................................................................................................................................................2221.50301000020000
.....AAGGAGGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2621.00200100010000
....CAAGGAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2521.00200000020000
.............GCTGGCCACCGTGGGAGCGGAGCACGC...............................................................................................................................................................................................................................................................................................................2721.00200000020000
.............GCTGGCCACCGTGGGAGCGG......................................................................................................................................................................................................................................................................................................................2021.00200000020000
..........GGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2121.00202000000000
..........GGCGCTGGCCACCGTGGGAGCGGAGCA..................................................................................................................................................................................................................................................................................................................2720.50101000000000
.....................CCGTGGGAGCGGAGCACGCCGTG...........................................................................................................................................................................................................................................................................................................2320.50100000010000
........GAGGCGCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2620.50101000000000
....................ACCGTGGGAGCGGAGCACGCCGTGT..........................................................................................................................................................................................................................................................................................................2520.50101000000000
.............GCTGGCCACCGTGGGAGCGGAGC...................................................................................................................................................................................................................................................................................................................2320.50100000010000
........GAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2120.50100000010000
............CGCTGGCCACCGTGGGAGCGGAGC...................................................................................................................................................................................................................................................................................................................2420.50101000000000
..GTCAAGGAGGCGCTGGCCACCGTGGGA..........................................................................................................................................................................................................................................................................................................................2720.50100000010000
......................CGTGGGAGCGGAGCACGCC..............................................................................................................................................................................................................................................................................................................1920.50100000100000
................GGCCACCGTGGGAGCGGAGCACGC...............................................................................................................................................................................................................................................................................................................2420.50100000010000
....CAAGGAGGCGCTGGCCACCGTGGGAGCGG......................................................................................................................................................................................................................................................................................................................2920.50100000010000
....CAAGGAGGCGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................2720.50100000010000
................GGCCACCGTGGGAGCGGAGCACG................................................................................................................................................................................................................................................................................................................2320.50101000000000
..................CCACCGTGGGAGCGGAGCACGC...............................................................................................................................................................................................................................................................................................................2220.50100100000000
............CGCTGGCCACCGTGGGAGC........................................................................................................................................................................................................................................................................................................................1920.50100000010000
...................CACCGTGGGAGCGGAGCACGCCGTG...........................................................................................................................................................................................................................................................................................................2520.50100000010000
......AGGAGGCGCTGGCCACCGTGGGAGCG.......................................................................................................................................................................................................................................................................................................................2620.50100000010000
..............................CGGAGCACGCCGTGTCACTACGC..................................................................................................................................................................................................................................................................................................2320.50100000010000
.....AAGGAGGCGCTGGCCACCGTG.............................................................................................................................................................................................................................................................................................................................2120.50101000000000
............CGCTGGCCACCGTGGGAGCGGA.....................................................................................................................................................................................................................................................................................................................2220.50100000010000
.GGTCAAGGAGGCGCTGGC....................................................................................................................................................................................................................................................................................................................................1830.33100000010000
droEug1
TGGTCAAGGAGGCATTGGCCACCGTAGGAGCAGAGCATGCTGTGTCCCTGGTGAGTTC----------AGT------------TTGAATTGAGCT------------TTATTTTGAC---------------------------------AT-----------G-----------------TTTAATAAGGAAGACTGTTCCA------TTGAATATTGGGTTGATGCACATTGAACATTTTGCGAA---TTCCATTAACG------------TTGGATC-ATCC-ACTTCAGGTTTCCACGCGCGAGGAAATCAGTGACCTGCTGTCCATGGAGAACCACATSizeHit CountTotal NormTotal
No Reads
droBia1
TTTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CT-CCCC-ATTTAAGGTCTCCACGCGCGAGGAGATCAGCGACCTGCTGTCCATGGAGAACCACATSizeHit CountTotal NormTotal
No Reads
droTak1
TAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCTTTCCCC-ATTAAAGGTTTCTACGCGCGAGGAGATCAGCGACCTGCTGTCCATGGAGAACCACATSizeHit CountTotal NormTotal
No Reads
droEle1
TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCGGAGCACGCCGTGTCCCTGGTGAGTATA--CGTTGGTGCG------------TTGGGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCCAAGASizeHit CountTotal NormTotal
No Reads
droRho1
TTTTTAAT-----------------------------------------------------------------------------------------------------------------------------------------TTAAATTATATAGAAAA--------------------------------------------------------------------------T----------------GTTTAACT------------TTGAGTT-CTCT-ATTAAAGGTTTCTACGCGCGAGGAGATAAGCGACCTGCTCTCCATGGAGAACCACATSizeHit CountTotal NormTotal
No Reads
droFic1
TGGTCAAGGAGGCGCTGGCCACCGTTGGAGCGGAGCACGCCGTGTCACTGGTGAGACT----------GAT------------TTGGATAAGGCTAAGATAAACTGATTATGGCTACATTTAAAAAACACTTAAGA--AGTTATCCATA------------GC----------------------------------------ACTTT------------------------------TC-----AGA--GTGCTCTAAAG------------TTTAATT-AA------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGGTCAAGGAGGCGCTGGCCACCGTGGGAGCCGAGCATGCCGTGTCACTGGTGAGTGTCCTTTAGACGGAA------------G---------------------------------------------------------------AATATTTATAGAGCT--------------------------------------------------------------------------T----------------ACTTAA--CTC---------ATG------ACC-TTAAAAGGTCTCCACCCGCGAGGAGATTAGCGATTTGCTATCCATGGAGAACCACATSizeHit CountTotal NormTotal
No Reads
droAna3
ATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGATTCAACCAAGTTATTAATAAT-------------TATTA-----TTT-TTCCAAGGTTTCCACGCGAGAGGAGATCAGCGACCTGTTGTCCATGGAAAACCACATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................GAGAGGAGATCAGCGACCTGTT..................2214.004100030
...............................................................................................................................................................................................................................................................................................................GAGAGGAGATCAGCGACCTGT...................2112.002000110
...............................................................................................................................................................................................................................................................................................................GAGAGGAGATCAGCGACCT.....................1912.002000020
...........................................................................................................................................................................................................................................................................................................................GCGACCTGTTGTCCATGGAAAACC....2411.001100000
..........................................................................................................................................................................................................................................................................................................CACGCGAGAGGAGATCAGCGACCTGTT..................2711.001100000
.........................................................................................................................................................................................................................................................................................................................CAGCGACCTGTTGTCCATGGAA........2211.001000001
......................................................................................................................................................................................................................................................................................................................GATCAGCGACCTGTTGTCCATG...........2211.001100000
.......................................................................................................................................................................................................................................................................................................................ATCAGCGACCTGTTGTCCATGGAA........2411.001100000
..............................................................................................................................................................................................................................................................................................................CGAGAGGAGATCAGCGACCTGT...................2211.001100000
............................................................................................................................................................................................................................................................................................................CGCGAGAGGAGATCAGCGACC......................2111.001000001
................................................................................................................................................................................................................................................................................................................AGAGGAGATCAGCGACCT.....................1811.001100000
.......................................................................................................................................................................................................................................................................................................................ATCAGCGACCTGTTGTCCATGGAAAACC....2811.001000010
..............................................................................................................................................................................................................................................................................................................CGAGAGGAGATCAGCGACC......................1911.001100000
.....................................................................................................................................................................................................................................................................................................................AGATCAGCGACCTGTTGTT...............1911.001100000
droBip1
ATTA-----------------------------------------------------T--------------------------------------------------------TAC--T-------------------------ATAACATCTACTATAAAAG-----------------TTTAATA---------------------------------------------AAAAATT--------------------------------TTTT------GCT-TTCCAAGGTTTCCACGCGCGAGGAGATCAGCGACCTGTTGTCTATGGAAAACCACATSizeHit CountTotal NormTotal
No Reads
dp5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTCCACGCGCGAGGAGATTAGCGATCTGCTGTCAATGGAGAAGCACATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................ACGCGCGAGGAGATTAGCGATCTGCT..................2611.0010010000000
......................................................................................................................................................................................................................................................................................................................GATTAGCGATCTGCTGTCAATGGA.........2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................ATTAGCGATCTGCTGTCAATGGAGAAGCA...2911.0010000001000
.......................................................................................................................................................................................................................................................................................................................ATTAGCGATCTGCTGTCAATGGAGAAG.....2711.0010010000000
............................................................................................................................................................................................................................................................................................................CGCGCGAGGAGATTAGCGATCTGC...................2411.0010100000000
droPer2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTCCACGCGCGAGGAGATTAGCGATCTGCTGTCAATGGAGAAGCACATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCAATGGAGA.......1911.001000001
......................................................................................................................................................................................................................................................................................................................GATTAGCGATCTGCTGTCAATGGAGAA......2711.001000001
.......................................................................................................................................................................................................................................................................................................CTCCACGCGCGAGGAGATTAGCGATCTGC...................2911.001100000
droWil2
TGGTTAAGGAGGCATTGACCAGCGTTGGTGCCGAACATGCAGTATCCTTAGTGAGTGA----------ACA------------AAAAAT-----------ATCCCA-----------------------------------------------------------------TTTGATTTGA----------------------TCTTT------------------------------TA-----TGA--TTGCATTAACA-----------------TT-CTTT-TTCTTAGGTTTCTACTCGCGAGGAAATCAGCGATCTGCTGTCCATGGAAAATCACATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............ATTGACCAGCGTTGGTGCC.......................................................................................................................................................................................................................................................................................................................1914.00401030
.............ATTGACCAGCGTTGGTGC........................................................................................................................................................................................................................................................................................................................1813.00330000
................GACCAGCGTTGGTGCCGAACATGC...............................................................................................................................................................................................................................................................................................................2412.00201010
.............ATTGACCAGCGTTGGTGCCGA.....................................................................................................................................................................................................................................................................................................................2112.00201010
.........................................................................................................................................................................................................................................................................................................CTACTCGCGAGGAAATCAGCG.........................2112.00200200
.............ATTGACCAGCGTTGGTGCCGAAC...................................................................................................................................................................................................................................................................................................................2312.00200110
.....................................................................................................................................................................................................................................................................................................GTTTCTACTCGCGAGGAAATC.............................2112.00210100
................................GAACATGCAGTATCCTTAGTTT.................................................................................................................................................................................................................................................................................................2212.00201010
..............................................................................................................................................................................................................................................................................................................................ATCTGCTGTCCATGGAAAAT.....2011.00100100
............CATTGACCAGCGTTGGTGCCGAACATGC...............................................................................................................................................................................................................................................................................................................2811.00100100
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAAAAT.....2111.00100100
.............................................................................................................................................................................................................................................................................................................................GATCTGCTGTCCATGGAAAATCACAT2611.00101000
.......................................................................................................................................................................................................................................................................................................................ATCAGCGATCTGCTGTCCATGGAAAAT.....2711.00100010
....TAAGGAGGCATTGACCAGCGTTGGT..........................................................................................................................................................................................................................................................................................................................2511.00100100
.......................................................................................................................................................................................................................................................................................................................ATCAGCGATCTGCTGTCCATGGAAAATCA...2911.00101000
...............TGACCAGCGTTGGTGCCGAACATGCAGT............................................................................................................................................................................................................................................................................................................2811.00100100
................................GAACATGCAGTATCCTTAGT...................................................................................................................................................................................................................................................................................................2011.00101000
.GGTTAAGGAGGCATTGACCAGCGTTGGT..........................................................................................................................................................................................................................................................................................................................2811.00100100
.............ATTGACCAGCGTTGGTGCCGAA....................................................................................................................................................................................................................................................................................................................2211.00100100
...............................................................................................................................................................................................................................................................................................................GCGAGGAAATCAGCGATCTGC...................2111.00100010
...............................................................................................................................................................................................................................................................................................................................TCTGCTGTCCATGGAAAATCAC..2211.00101000
...............................CGAACATGCAGTATCCTTAGTTT.................................................................................................................................................................................................................................................................................................2311.00100010
.............ATTGACCAGCGTTGGTGCCG......................................................................................................................................................................................................................................................................................................................2011.00100100
....................AGCGTTGGTGCCGAACATGCAGTATCCT.......................................................................................................................................................................................................................................................................................................2811.00100010
............................................................................................................................................................................................................................................................................................................................CGATCTGCTGTCCATGGAAA.......2011.00100010
...............................CGAACATGCAGTATCCTTAGTGAGT...............................................................................................................................................................................................................................................................................................2511.00100010
......................................................................................................................................................................................................................................................................................................................AATCAGCGATCTGCTGTCCATGGAAAAT.....2811.00100010
....................................ATGCAGTATCCTTAGTGAGTGA----------AC.................................................................................................................................................................................................................................................................................2411.00100010
...............TGACCAGCGTTGGTGCCGAACATGCA..............................................................................................................................................................................................................................................................................................................2611.00100010
....................AGCGTTGGTGCCGAACATGCA..............................................................................................................................................................................................................................................................................................................2111.00101000
................GACCAGCGTTGGTGCCGAACATGCA..............................................................................................................................................................................................................................................................................................................2511.00100100
.............ATTGACCAGCGTTGGTGCCGAACATGCAG.............................................................................................................................................................................................................................................................................................................2911.00100100
........GAGGCATTGACCAGCGTTGGT..........................................................................................................................................................................................................................................................................................................................2111.00100100
.......................................................................................................................................................................................................................................................................................................TTCTACTCGCGAGGAAATCAGCG.........................2311.00100100
.............ATTGACCAGCGTTGGTGCCGAACATGC...............................................................................................................................................................................................................................................................................................................2711.00100010
.GGTTAAGGAGGCATTGACCAGCGTTGGTG.........................................................................................................................................................................................................................................................................................................................2911.00100100
.......................................................................................................................................................................................................................................................................................................TTCTACTCGCGAGGAAATCAGCGA........................2411.00100100
.........................................................................................................................................................................................................................................................................................................CTACTCGCGAGGAAATCAGCGATCTGC...................2711.00100100
.........................................................................................................................................................................................................................................................................................................CTACTCGCGAGGAAATCAGCGA........................2211.00100100
................GACCAGCGTTGGTGCCGAACATGCAGT............................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................CGCGAGGAAATCAGCGATCTGC...................2211.00100100
.............ATTGACCAGCGTTGGTGCCGAACATGCA..............................................................................................................................................................................................................................................................................................................2811.00100100
................GACCAGCGTTGGTGCCGAACA..................................................................................................................................................................................................................................................................................................................2111.00100100
....................AGCGTTGGTGCCGAACATGCAGT............................................................................................................................................................................................................................................................................................................2311.00100010
...................................CATGCAGTATCCTTAGTTT.................................................................................................................................................................................................................................................................................................1940.25100010
....................................ATGCAGTATCCTTAGTTT.................................................................................................................................................................................................................................................................................................18200.05100010
droVir3
TGGTCAAGGAGGCGCTGAGCAGCGTGGGTGCCGATCATGCCGTGTCCCTGGTGCGTAC----------TAGTAATCCTCTCTTTTGCATGAGGGTA-----------------------------------------------------------------ACATTTGCCAAT-----------------------------------------------------------------------------------------------------TG------ACCTTCAATAGGTTTCAACACGCGAGGAGATCAGCGACTTGCTGTCCATGGAAAAGCACATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................CAACACGCGAGGAGATCAGC..........................2013.003000000000000000000000000000000000000000000000000000000000002010
.......................................................................................................................................................................................................................................................................................................TTCAACACGCGAGGAGATCAGCGACTTG....................2812.002000200000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCAACACGCGAGGAGATCAGC..........................2111.001000000000000000000000000000000000000000000000000000000000000010
....CAAGGAGGCGCTGAGCAGCGTGGGT..........................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................GACTTGCTGTCCATGGAAAAG.....2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTCAACACGCGAGGAGATCAG...........................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GACTTGCTGTCCATGGAAAAGCAC..2411.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTCAACACGCGAGGAGATCAGCGACTT.....................2711.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAACACGCGAGGAGATCAGCGACTTGCC..................2811.001000100000000000000000000000000000000000000000000000000000000000
................................GATCATGCCGTGTCCCTGGT...................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCGAGGAGATCAGCGACTTGC...................2111.001000000000000001000000000000000000000000000000000000000000000000
..............CTGAGCAGCGTGGGTGCC.......................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GGTTTCAACACGCGAGGA.................................1811.001001000000000000000000000000000000000000000000000000000000000000
...................CAGCGTGGGTGCCGATCA..................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GGAGATCAGCGACTTGCTGTCCA.............2311.001000000000000000000000000000000000000000000000000000000000010000
TGGTCAAGGAGGCGCTGA.....................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
...............................CGATCATGCCGTGTCCCTGGTTT.................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
........GAGGCGCTGAGCAGCGTGGGT..........................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
..GTCAAGGAGGCGCTGAGCAGCGTGGG...........................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................CGACTTGCTGTCCATGGAA........1911.001001000000000000000000000000000000000000000000000000000000000000
...........GCGCTGAGCAGCGTGGGTGCCGATCA..................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GAGGAGATCAGCGACTTGCTGTC...............2311.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGAGGAGATCAGCGACTTGCT..................2111.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CACGCGAGGAGATCAGCGACTTGCT..................2511.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GAGGAGATCAGCGACTTGC...................1911.001000000000000000000000000000000000000000000000000000000000001000
....CAAGGAGGCGCTGAGCAGCGTGG............................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
...TCAAGGAGGCGCTGAGCA..................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................CGATCATGCCGTGTCCCTG.....................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATCAGCGACTTGCTGTCCATGGAAAA......2611.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGGTCAAGGAGGCGCTCGGCAGCGTGGGCGCCGAGCATGCAGTTTCCCTGGTGAGCCA------------------------------------------------------------------CGACAGTCAACT--AGCTGTTGAGA------------GA----------------------------------------TGCCT------------------------------TT-----GGC--TTGGTCTGAGT-----------TTTTG-TT-TATT-TCAACAGGTTTCCACACGCGAGGAAATCAGCGATTTGCTGGCTATGGAGAATCACATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................CCACACGCGAGGAAATCAGC..........................2012.002100001
.............................................................................................................................................................................................................................................................................................................................GATTTGCTGGCTATGGAGA.......1911.001000001
.............................................................................................................................................................................................................................................................................................................................GATTTGCTGGCTATGGAG........1811.001000001
.GGTCAAGGAGGCGCTCGGCAGCGT..............................................................................................................................................................................................................................................................................................................................2411.001000001
....CAAGGAGGCGCTCGGCAGCGT..............................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................TCCACACGCGAGGAAATCAGCG.........................2211.001000001
droGri2
TGGTCAAGGAGGCGCTGACCAGTGTGGGTGCCGAGCATGCCGTGTCCCTCGTGAGTAA---TAATGCAGCA------------GTAAGTT---------------------------------------------------------------------AATAG--------------------------------------------------------------------------CCCA------------GTTAA--CACATTGTAATTGCC------ATT-TTTATAGGTTTCCACTCGCGAGGAGATAAGCGATTTGCTGGCAATGGAGAGTCACATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................CGATTTGCTGGCAATGGAGAGTCA...2420.50110

Generated: 05/18/2015 at 03:50 PM