ID:

dsi_10615

 Coordinate:

2l:17036921-17037111 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.9 -30.6 -30.5

Flybase annnotation

exon [2l_17037112_17037273_-]; CDS [2l_17037112_17037273_-]; exon [2l_17036387_17036920_-]; CDS [2l_17036387_17036920_-]; intron [2l_17036921_17037111_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACACAGCCATCGACGCGCAGTTTGATTTGTGCGAGGATGACGACACACAGGTGAGTGGGAGCGCTAGTAAAGCCATAAAGTTACCTAAATGATACAATGGACTCGGAATATTTGGCCTGTATGCAACCGATGTGTGTAAATAAACCAAAATCTCCTCTAGTCCTTCTCCGTATCTGTATCTACCACTGTATTCTCTGCCATAAGATTATATACTAACTAACTATCTTTATCATCCCTGTAGATCCGCCGACAGGCCATCAAAGATCTTCCGAAACTGTGCCAGGGAAACGC
**************************************************......((((......((((((......(((((.......(((((...(((((.(((...(((((..(((.((((((....)).)))).)))..)))))...)))...)))))......)))))............(((((..(((......)))..))))).)))))......))))))..)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.....................................................................................................CTCGGAATATTTGGCCTG............................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0
...............................................................................GTTACCTAAATGATACAATGGAC............................................................................................................................................................................................. 23 0 1 2.00 2 0 2 0 0 0
................GCAGTTTGATTGGGGCGA................................................................................................................................................................................................................................................................. 18 2 6 1.33 8 0 0 8 0 0
..................AGTTTGATTTGTGCGAGGATGAC.......................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.................CAGTTTGATTGGGGCGA................................................................................................................................................................................................................................................................. 17 2 18 0.22 4 0 0 4 0 0
........ATCGACGCGCAGCTT............................................................................................................................................................................................................................................................................ 15 1 13 0.08 1 0 0 0 1 0
............................................................................................................................................................................TCTGTAGCTACCACGG....................................................................................................... 16 2 15 0.07 1 0 0 0 0 1
................................................................................................................................................................................................................................................................ATTAAAGATCTTGCGGAAC................ 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TGTGTCGGTAGCTGCGCGTCAAACTAAACACGCTCCTACTGCTGTGTGTCCACTCACCCTCGCGATCATTTCGGTATTTCAATGGATTTACTATGTTACCTGAGCCTTATAAACCGGACATACGTTGGCTACACACATTTATTTGGTTTTAGAGGAGATCAGGAAGAGGCATAGACATAGATGGTGACATAAGAGACGGTATTCTAATATATGATTGATTGATAGAAATAGTAGGGACATCTAGGCGGCTGTCCGGTAGTTTCTAGAAGGCTTTGACACGGTCCCTTTGCG
**************************************************......((((......((((((......(((((.......(((((...(((((.(((...(((((..(((.((((((....)).)))).)))..)))))...)))...)))))......)))))............(((((..(((......)))..))))).)))))......))))))..)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M023
head
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
.............................................................................................................................................................................................................................................TGTCTAGGCGGCTGTCCGG................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................AGACATGGATGGTAACAT..................................................................................................... 18 2 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................AGACATTGATGGTAACAT..................................................................................................... 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................ACACAGTTATTTGGTCTTA............................................................................................................................................ 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................AGGGAGAGGCCTAGACAT................................................................................................................. 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TCAGGAAGAGCCATA...................................................................................................................... 15 1 5 0.20 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................TTTTTGGTTTGAGAGGAGA..................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................TTTATTTGGATTTAG........................................................................................................................................... 15 1 20 0.20 4 4 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................TGTCCGGTAGTTTAGAGA........................ 18 2 9 0.11 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................AGACATGGATGGTAACA...................................................................................................... 17 2 9 0.11 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CTGGTTGATTCTAGAAGGC.................... 19 3 10 0.10 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................GCGGCTGTCAGGGAGATTC............................ 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGACAGTAATAGTAGGG....................................................... 17 2 16 0.06 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................TGGTTTTAGACGTGATC................................................................................................................................... 17 2 18 0.06 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................TTTATTTGGATTTAGA.......................................................................................................................................... 16 1 19 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................ACCTCTAGGCAGCTGT....................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
....................AAAATAAACAGTCTCCTACT........................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:17036871-17037161 - dsi_10615 ACACAGCCATCGACGCGCAGTTTGATTTGTGCGAGGATGACGACACACAGGTGAGTGGGAGCGC---TAGT--AAA------G--------C-----CATAAAGTTACCTAAATGATACAATGGACTCGG-AATA--------------------------------------------------------------------------------------------------------------------TTTGGCCTGTATGCAACC------------------------------------------------------------------------------------------------------------------------------GATGTGTGTAAATAAACCAAAATCTCCTCTAGTCCT----------------------------------TCT---CCGTATCTGTATCTACCACTGTATTC---TCTG---------------------CCATAAGAT---------------------------TAT-------------AT--AC------TA--ACTAA-------------CTATCTTT--------ATCATCCCTGTAGATCCGCCGACAGGCCATCAAAGATCTTCCGAAACTGTGCCAGGGAAACGC
droSec2 scaffold_7:1118808-1119098 - ACACAGCCATCGACGCGCAGTTTGATTTGTGCGAGGATGACGACACACAGGTGAGTGGGAGCGC---TAGC--AAA------G--------C-----CATAAAGTTACCTAAATGATACAATGGACTCGA-AATA--------------------------------------------------------------------------------------------------------------------TTTGGCCTGTGTGCAACT------------------------------------------------------------------------------------------------------------------------------GATGTGTGTAAATAAACCAAAATCTACTGTAGTCCT----------------------------------GCT---CCGTATCTGTATCTATCACTATATTC---TCTG---------------------CCATAAGAT---------------------------TAT-------------AT--AC------TA--ACTAA-------------CTATCTTT--------ATCATCCCTTTAGATCCGCCGCCAGGCCATCAAAGATCTGCCGAAACTGTGCCAGGGAAACGC
dm3 chr2L:17477177-17477448 - ACACAGCCATAGACGCGCAGTTTGATTTGTGCGAGGATGACGACACACAGGTGAGTGG-GT---------------------G--------C-----CATAAAGTTACCCAGCTGATACAATAGGCTCGG-AATT--------------------------------------------------------------------------------------------------------------------TTTGGCCTGTATGCAGCT------------------------------------------------------------------------------------------------------------------------------GATGTGTGTAAATAAATCGAAATCCCCTGTAATCCT----------------------------------GCT---CCGTATCT-------------------------TGACAGCTTAAGATATCCCAC------------------------------------------------------ATATTCCACA-A--ACTAA-------------ATATCTTT--------ATCATCCTTGTAGATCCGCCGCCAGGCCATCAAAGATCTGCCGAAACTGTGCCAGGGAAACGC
droEre2 scaffold_4845:6771124-6771327 + ACACAGCCATCGACGCGCAGTTTGACTTGTGCGAGGATGACGACACACAGGTGGGTGG-AACGC---TAGT--AAG------C--------C-----TATAAAGCTACCTAGATCATGCACTGGCTCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------TAACAACATAAGAT--------------------------------------------------------------TACTCCGCA-T--ACTAA-------------CCATGTT----------GCATCCGCTTAGATCCGCCGCCAGGCCATCAAAGATCTGCCGAAACTGTGTCAGGGAAACGC
droYak3 2R:3621798-3621962 + ACACAGCCATCGACGCGCAGTTTGACTTGTGCGAGGATGACGACACACAGGTGGGTGA-AGCGG---AAGT--AAG------C--------C-----TATGAAGCTACACAGATGATACACTGGGCTTGG-AATC--------------------------------------------------------------------------------------------------------------------GTCAGCCTGTATGCAACT------------------------------------------------------------------------------------------------------------------------------AATGGGCTTAAATATACCGACATCCCCTG-AATCCT----------------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409016:103506-103754 - ACACAGCTATCGATGCACAGTTTGATTTATGCGAAGATGACGACACACAGGTGGGTAG-AGCCC---TGTT--ATA------C--------C-----TTTAGGCTTAACTCTAAGAAATAATAAGTTACATAGTT--TTACCTCA--ATCTATCCATTAATTTCATTTTGA----------------------------------------------------------------------------TATTTTCACATTGAATAATACC------------------------------------------------------------------------------------------------------------------------------CACTCGCTTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAA-------------CCTTCTT----------TCATCCCTTTAGATCCGACGCCAGGCCATCAAAGATTTACCAAAACTTTGCCAGGGAAACGC
droBia1 scf7180000302422:6237218-6237571 + ACACGGCCATCGACGCACAGTTCGATTTGTGCGAGGATGACGACACACAGGTGGGTGG-ATCCA---TATT--AAC------C--------C-----TTTAAGATCTACTAGATAATATAATGGGTTGGT-GATA--------------------------------------------------------------------------------------------------------------------TCGGGCTCGCATGCCTTTTATATCTGCTCTTATCTTTGGATTAGTATAGTA-------------------------TTATGCGGTACACCAAGCCAGTTTTGTAAGAAAAGTTATTGTATTATAAACTAATCGATCTATTAGCTG------------------------------------------------------------------------------------------------CCTTA---ATAA---------------------CAGTA---------TTATATTTAAGGCATACTTTATTTT-------------TG--CA----CC-ACT---AA-------------CATTTATA-A---CCCATCTTCCCTTCAGATCCGCCGCCAGGCCATCAAGGATCTGCCGAAACTCTGTCAGGGAAACGC
droTak1 scf7180000415079:101552-101674 + ACACAGCCATCGATGCACAGTTCGATTTGTGCGAAGATGACGACACACAGGTGGGTGG-AGCCC---TATT--AAA------C--------C-----TTTAAAGTCAACTAGATGATATAGTGGGTTTAT-GGTA--------------------------------------------------------------------------------------------------------------------TTCGATATTTATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491046:175442-175771 - ACACAGCCATCGATGCCCAGTTCGATTTGTGCGAAGATGACGACACACAGGTGGGTGG-GGAGC---TGTA--AAC------C--------C-----TTTGAACTTAACAAGATGATAAATAGAGTTAGG-AATT--------------------------------------------------------------------------------------------------------------------TTTAAACTATA-----CA------------------------------------------------------------------------------------------------------------------------------AGTGTGTATCTATATGTAGATATTTCCTATAA-ATGTATGTTCAACGTTCAATGTTCATAAGGCATTTGTTTT---CCATATCAGCCTTTAGTATTTAATTTTTAACTG---------------------CCCAAAGTGTTTAAAT--------------------TCTAGAGCATTAAACTAA--AC------TA------A-------------CGA---------------AACCACTTCAGATCCGCCGCCAGGCCATTAAGGATCTGCCGAAACTCTGTCAGGGAAACGC
droRho1 scf7180000780006:63752-63914 - ACACAGCCATCGATGCCCAGTTCGACCTATGCGAAGATGACGACACACAGGTGGGTGG-AGCCC---TA----AGC------C--------C-----CTTAAACTTAACCAGATGGTGTAATGAGTTGAC-CATC--------------------------------------------------------------------------------------------------------------------TTTGATCTATACACTTCC----------------------------------------------------------------------------------------------------------------------------CCAGTCCG--TGTCTGTAGCCGAGTCCTTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--------------------------------------------GCTCCTC
droFic1 scf7180000453855:260161-260452 - ACACAGCTATCGATGCACAGTTTGATTTATGCGAAGATGACGACACACAGGTGGGTGG-AGTAC---CTTTAAAGC------C--------C-----TTTAAACCTTAACATATGGTATAAAAGTACTAC-AATC--------------------------------------------------------------------------------------------------------------------CTCTATA---------------------------------------------------------------------------------ATG-------CTT---AGAAA---------ATTGTAAAATCTTCAATCTATCATCAAGTCCG-----------------------------------------------------------ATTGTCCTCCAC--AATCTTAATCTTTTACAATATAA---TTAA---------------------TAGTA---------TT--------------------TCT-------------AT--AA----TC-AAA---AA-------------CTATTCTA-A---AA----AATCTTCCAGATCCGTCGACAGGCCATCAAGGATCTTCCAAAACTCTGTCAGGGAAATGC
droKik1 scf7180000302246:214758-215061 + ACACAGCCATCGATGCACAGTTTGATTTATGCGAAGATGACGACACACAGGTGGGTGG-CGTTGGTCTAGT--AGA------C--------C-----TAT----------------------------------TTTTTACCTATGCAGGTGGCCGAAAATGTCAT---GGTTTTTTGGCTATTAAGTATTACGTATGAGGGTAACTGGTGTACGCGGTTTGTGTATCCCGTTTCCATGCAACAGAATATTTTAAT----------------------------------------------------------------------------------------------------------------------------------------------AT-----------------------------------------------------------------------------------------------------------------------------GAATA---------T-----------------------------------------GAAAGATG-GGG---AAGTATTAATGATTGATGTTACTCT---TA---TCTCATTTTAGATTCGTCGCCAGGCCATCAAGGATCTGCCAAAATTATGTCAAGGAAATGC
droAna3 scaffold_12916:3403828-3403909 + TCATATTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------A-------------CCAAATT----ATTT----GGTCTTTCAGATTCGCCGGCAAGCCATTAAGGACCTTCCCAAGCTATGCCAGGGTAACGC
droBip1 scf7180000396737:1367592-1367647 - ACACCGCCATCGACGCACAGTTCGATTTATGTGAAGATGACGACACACAGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group3:10966389-10966440 - A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCGCCGTCAGGCCATTAAAGATTTGCCCAAATTATGTCAGGGAAATCC
droPer2 scaffold_8:2177911-2177962 - A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCGCCGTCAGGCCATTAAAGATTTGCCCAAATTATGTCAGGGAAATCC
droWil2 scf2_1100000004585:8391246-8391318 + ATACTGCAATTGATGCTCAATTCGATCTCTGTGAAGATGATGACACACAGGTACGCCA-AGGTG---G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTGGTAG
droVir3 scaffold_12963:16390590-16390876 - dvi_12274 ACACCGCAATCGATGCACAGTTCGATTTATGCGAAGATGATGATACACAGGTGCGTAA-GTCAA-----AT--AACAGTTAACTTTGTGCTGCTGAAAAT----------------------------------TAAATACCGCTGCCGGCGGCATACA-TA-----------------------------------------ACCTGGCATA--------------------------------------CATGGCC----------------------ATGGCCTTATGT---TATAGTATTCCAAAAGAAAGAATTATAAATTATAATGCCGTGCGATA-------ATTAGAAAAAATGTGATTGTAT---------------------------ATGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATG----CCCACTTTCAGATACGCCGCCAAGCCATCAAAGATTTGCCCAAGCTATGCCAGGGCAATGC
droMoj3 scaffold_6500:21319329-21319532 - ACACAGCAATTGATGCACAATTCGATCTATGTGAAGATGATGATACACAGGTGGGTTT-ACCTA---A--------------C--------A-----TTTGCAC----TCAAATACTACAATCAATTGTT-GCTA--------------------------------------------------------------------------------------------------------------------TGGGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TTGTAT-------------------------------------------ATAAT------------------------------------------------------ATATTTAACA-A--------------------ATATTACTGTTATGT----CCTCTTTCAGATACGGCGGCAAGCTATCAAAGATTTGCCAAAGCTATGTCAGGGCAACCC
droGri2 scaffold_15252:13807384-13807552 - ATACGGCGATTGATGCACAGTTCGATCTATGCGAAGATGATGATACACAAGTAAATAA-AATTG---A------AA------A--------A-----TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------GAATA---------C---------------------------------------ATATACAATA-AAA---AA-------------AAAC-ACTCT---GA----TCTCTTGCAGATACGTCGACAAGCCATTAAAGATTTGCCCAAGCTCTGTCAGGGCAATGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACACAGCCATCGACGCGCAGTTTGATTTGTGCGAGGATGACGACACACAGGTGAGTGGGAGCGC---TAGT--AAA------G--------C-----CATAAAGTTACCTAAATGATACAATGGACTCGG-AATA--------------------------------------------------------------------------------------------------------------------TTTGGCCTGTATGCAACC------------------------------------------------------------------------------------------------------------------------------GATGTGTGTAAATAAACCAAAATCTCCTCTAGTCCT----------------------------------TCT---CCGTATCTGTATCTACCACTGTATTC---TCTG---------------------CCATAAGAT---------------------------TAT-------------AT--AC------TA--ACTAA-------------CTATCTTT--------ATCATCCCTGTAGATCCGCCGACAGGCCATCAAAGATCTTCCGAAACTGTGCCAGGGAAACGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................CTCGG-AATA--------------------------------------------------------------------------------------------------------------------TTTGGCCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
.......................................................................................................GTTACCTAAATGATACAATGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
..................AGTTTGATTTGTGCGAGGATGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
droSec2
ACACAGCCATCGACGCGCAGTTTGATTTGTGCGAGGATGACGACACACAGGTGAGTGGGAGCGC---TAGC--AAA------G--------C-----CATAAAGTTACCTAAATGATACAATGGACTCGA-AATA--------------------------------------------------------------------------------------------------------------------TTTGGCCTGTGTGCAACT------------------------------------------------------------------------------------------------------------------------------GATGTGTGTAAATAAACCAAAATCTACTGTAGTCCT----------------------------------GCT---CCGTATCTGTATCTATCACTATATTC---TCTG---------------------CCATAAGAT---------------------------TAT-------------AT--AC------TA--ACTAA-------------CTATCTTT--------ATCATCCCTTTAGATCCGCCGCCAGGCCATCAAAGATCTGCCGAAACTGTGCCAGGGAAACGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAGATCTGCCGAAA.................1911.0010010
.................CAGTTTGATTTGTGCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...................GTTTGATTTGTGCGAGGATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATCAAAGATCTGCCGA...................1911.0010010
................GCAGTTTGATTTGTGCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................CGAGGATGACGACACACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.....................TTGATTTGTGCGAGGATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
dm3
ACACAGCCATAGACGCGCAGTTTGATTTGTGCGAGGATGACGACACACAGGTGAGTGG-GT---------------------G--------C-----CATAAAGTTACCCAGCTGATACAATAGGCTCGG-AATT--------------------------------------------------------------------------------------------------------------------TTTGGCCTGTATGCAGCT------------------------------------------------------------------------------------------------------------------------------GATGTGTGTAAATAAATCGAAATCCCCTGTAATCCT----------------------------------GCT---CCGTATCT-------------------------TGACAGCTTAAGATATCCCAC------------------------------------------------------ATATTCCACA-A--ACTAA-------------ATATCTTT--------ATCATCCTTGTAGATCCGCCGCCAGGCCATCAAAGATCTGCCGAAACTGTGCCAGGGAAACGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTGCCGAAACTGTGCCAGGG......2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000001000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGCCAGGGAAACGC1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................AGTTTGATTTGTGCGAGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000010000000000000000000000000000
...................GTTTGATTTGTGCGAGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAA-------------ATATCTTT--------ATCATCCTTGTAG..................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTGTGCCAGGGAAACGC2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACTGTGCCAGGGAAACGC2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTTTGATTTGTGCGAGGATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTGCCGAAACTGTGCC..........2212.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGACGCGCAGTTTGATTTGTGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTTGTGCGAGGATGACGACACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAAACTGTGCCAGGGA.....1912.0020000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGATTTGTGCGAGGATGACGACACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTGCCAGGGAAACG.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..................AGTTTGATTTGTGCGAGGATGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAGATCTGCCGAAACTGT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCTGCCGAAACTGTGCCAGGGA.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTGTGCGAGGATGACGACACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTTTGATTTGTGCGAGGATGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTT--------ATCATCCTTGTAG..................................................1911.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACACAGCCATAGACGCGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAGATCTGCCGAAACTGTGCCA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCATCAAAGATCTGCCGAAA.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTGTGCGAGGATGACGACACACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------ATATCTTT--------ATCATCCTTGTAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCAGGCCATCAAAGATCTGCCT....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGATCTGCCGAAACTG..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAAGATCTGCCGAAACTGA.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------ATATCTTT--------ATCATCCTTGTA...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGCCGAAACTGTGCCAG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGTTTGATTTGTGCGAGGATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................GATTTGTGCGAGGATGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTGCCGAAACTGT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAAACTGTGCCAGGGAA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCCAC------------------------------------------------------ATATTCCACA-A--ACT..............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATTTGTGCGAGGATGACGACACACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-------------ATATCTTT--------ATCATCCTTGTAG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGCCATCAAAGATCTGCCG....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGGCCATCAAAGATCTGCCGAAAC................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAAACTGTGCCAGGGAAA...2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTGTGCCAGGGAAACG.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTGCCGAAACTGTGCCAGGGA.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................GTGAGTGG-GT---------------------G--------C-----CATAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGATTTGTGCGAGGATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGTTTGATTTGTGCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTGCCGAAACTGTGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTTGATTTGTGCGAGGATGACGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........ATAGACGCGCAGTTTGATTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCATCAAAGATCTGCCGAAA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGATTTGTGCGAGGATGACGACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................CAGTTTGATTTGTGCGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........ATAGACGCGCAGTTTGATTTGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CATAGACGCGCAGTTTGATTTGTGCGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCATCAAAGATCTGC......................1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACACAGCCATCGACGCGCAGTTTGACTTGTGCGAGGATGACGACACACAGGTGGGTGG-AACGC---TAGT--AAG------C--------C-----TATAAAGCTACCTAGATCATGCACTGGCTCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------TAACAACATAAGAT--------------------------------------------------------------TACTCCGCA-T--ACTAA-------------CCATGTT----------GCATCCGCTTAGATCCGCCGCCAGGCCATCAAAGATCTGCCGAAACTGTGTCAGGGAAACGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................GCAGTTTGACTTGTGCGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
........ATCGACGCGCAGTTTGACTTGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
droYak3
ACACAGCCATCGACGCGCAGTTTGACTTGTGCGAGGATGACGACACACAGGTGGGTGA-AGCGG---AAGT--AAG------C--------C-----TATGAAGCTACACAGATGATACACTGGGCTTGG-AATC--------------------------------------------------------------------------------------------------------------------GTCAGCCTGTATGCAACT------------------------------------------------------------------------------------------------------------------------------AATGGGCTTAAATATACCGACATCCCCTG-AATCCT----------------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................AGTTTGACTTGTGCGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
...................GTTTGACTTGTGCGAGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
................GCAGTTTGACTTGTGCGAGGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
droEug1
ACACAGCTATCGATGCACAGTTTGATTTATGCGAAGATGACGACACACAGGTGGGTAG-AGCCC---TGTT--ATA------C--------C-----TTTAGGCTTAACTCTAAGAAATAATAAGTTACATAGTT--TTACCTCA--ATCTATCCATTAATTTCATTTTGA----------------------------------------------------------------------------TATTTTCACATTGAATAATACC------------------------------------------------------------------------------------------------------------------------------CACTCGCTTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAA-------------CCTTCTT----------TCATCCCTTTAGATCCGACGCCAGGCCATCAAAGATTTACCAAAACTTTGCCAGGGAAACGCSizeHit CountTotal NormTotal
No Reads
droBia1
ACACGGCCATCGACGCACAGTTCGATTTGTGCGAGGATGACGACACACAGGTGGGTGG-ATCCA---TATT--AAC------C--------C-----TTTAAGATCTACTAGATAATATAATGGGTTGGT-GATA--------------------------------------------------------------------------------------------------------------------TCGGGCTCGCATGCCTTTTATATCTGCTCTTATCTTTGGATTAGTATAGTA-------------------------TTATGCGGTACACCAAGCCAGTTTTGTAAGAAAAGTTATTGTATTATAAACTAATCGATCTATTAGCTG------------------------------------------------------------------------------------------------CCTTA---ATAA---------------------CAGTA---------TTATATTTAAGGCATACTTTATTTT-------------TG--CA----CC-ACT---AA-------------CATTTATA-A---CCCATCTTCCCTTCAGATCCGCCGCCAGGCCATCAAGGATCTGCCGAAACTCTGTCAGGGAAACGCSizeHit CountTotal NormTotal
No Reads
droTak1
ACACAGCCATCGATGCACAGTTCGATTTGTGCGAAGATGACGACACACAGGTGGGTGG-AGCCC---TATT--AAA------C--------C-----TTTAAAGTCAACTAGATGATATAGTGGGTTTAT-GGTA--------------------------------------------------------------------------------------------------------------------TTCGATATTTATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACACAGCCATCGATGCCCAGTTCGATTTGTGCGAAGATGACGACACACAGGTGGGTGG-GGAGC---TGTA--AAC------C--------C-----TTTGAACTTAACAAGATGATAAATAGAGTTAGG-AATT--------------------------------------------------------------------------------------------------------------------TTTAAACTATA-----CA------------------------------------------------------------------------------------------------------------------------------AGTGTGTATCTATATGTAGATATTTCCTATAA-ATGTATGTTCAACGTTCAATGTTCATAAGGCATTTGTTTT---CCATATCAGCCTTTAGTATTTAATTTTTAACTG---------------------CCCAAAGTGTTTAAAT--------------------TCTAGAGCATTAAACTAA--AC------TA------A-------------CGA---------------AACCACTTCAGATCCGCCGCCAGGCCATTAAGGATCTGCCGAAACTCTGTCAGGGAAACGCSizeHit CountTotal NormTotal
No Reads
droRho1
ACACAGCCATCGATGCCCAGTTCGACCTATGCGAAGATGACGACACACAGGTGGGTGG-AGCCC---TA----AGC------C--------C-----CTTAAACTTAACCAGATGGTGTAATGAGTTGAC-CATC--------------------------------------------------------------------------------------------------------------------TTTGATCTATACACTTCC----------------------------------------------------------------------------------------------------------------------------CCAGTCCG--TGTCTGTAGCCGAGTCCTTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--------------------------------------------GCTCCTCSizeHit CountTotal NormTotal
No Reads
droFic1
ACACAGCTATCGATGCACAGTTTGATTTATGCGAAGATGACGACACACAGGTGGGTGG-AGTAC---CTTTAAAGC------C--------C-----TTTAAACCTTAACATATGGTATAAAAGTACTAC-AATC--------------------------------------------------------------------------------------------------------------------CTCTATA---------------------------------------------------------------------------------ATG-------CTT---AGAAA---------ATTGTAAAATCTTCAATCTATCATCAAGTCCG-----------------------------------------------------------ATTGTCCTCCAC--AATCTTAATCTTTTACAATATAA---TTAA---------------------TAGTA---------TT--------------------TCT-------------AT--AA----TC-AAA---AA-------------CTATTCTA-A---AA----AATCTTCCAGATCCGTCGACAGGCCATCAAGGATCTTCCAAAACTCTGTCAGGGAAATGCSizeHit CountTotal NormTotal
No Reads
droKik1
ACACAGCCATCGATGCACAGTTTGATTTATGCGAAGATGACGACACACAGGTGGGTGG-CGTTGGTCTAGT--AGA------C--------C-----TAT----------------------------------TTTTTACCTATGCAGGTGGCCGAAAATGTCAT---GGTTTTTTGGCTATTAAGTATTACGTATGAGGGTAACTGGTGTACGCGGTTTGTGTATCCCGTTTCCATGCAACAGAATATTTTAAT----------------------------------------------------------------------------------------------------------------------------------------------AT-----------------------------------------------------------------------------------------------------------------------------GAATA---------T-----------------------------------------GAAAGATG-GGG---AAGTATTAATGATTGATGTTACTCT---TA---TCTCATTTTAGATTCGTCGCCAGGCCATCAAGGATCTGCCAAAATTATGTCAAGGAAATGCSizeHit CountTotal NormTotal
No Reads
droAna3
TCATATTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------A-------------CCAAATT----ATTT----GGTCTTTCAGATTCGCCGGCAAGCCATTAAGGACCTTCCCAAGCTATGCCAGGGTAACGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATGCCAGGGTAACGC1911.001000001
droBip1
ACACCGCCATCGACGCACAGTTCGATTTATGTGAAGATGACGACACACAGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCGCCGTCAGGCCATTAAAGATTTGCCCAAATTATGTCAGGGAAATCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCGCCGTCAGGCCATTAAAGATTTGCCCAAATTATGTCAGGGAAATCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATACTGCAATTGATGCTCAATTCGATCTCTGTGAAGATGATGACACACAGGTACGCCA-AGGTG---G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTGGTAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................TTCGATCTCTGTGAAGATGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................AATTCGATCTCTGTGAAGATGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
droVir3
ACACCGCAATCGATGCACAGTTCGATTTATGCGAAGATGATGATACACAGGTGCGTAA-GTCAA-----AT--AACAGTTAACTTTGTGCTGCTGAAAAT----------------------------------TAAATACCGCTGCCGGCGGCATACA-TA-----------------------------------------ACCTGGCATA--------------------------------------CATGGCC----------------------ATGGCCTTATGT---TATAGTATTCCAAAAGAAAGAATTATAAATTATAATGCCGTGCGATA-------ATTAGAAAAAATGTGATTGTAT---------------------------ATGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATG----CCCACTTTCAGATACGCCGCCAAGCCATCAAAGATTTGCCCAAGCTATGCCAGGGCAATGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................TCGATTTATGCGAAGATGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
.............................................................................................................................................CGCTGCCGGCGGCATACA-TA-----------------------------------------ACCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................GAAGATGATGATACACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
ACACAGCAATTGATGCACAATTCGATCTATGTGAAGATGATGATACACAGGTGGGTTT-ACCTA---A--------------C--------A-----TTTGCAC----TCAAATACTACAATCAATTGTT-GCTA--------------------------------------------------------------------------------------------------------------------TGGGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TTGTAT-------------------------------------------ATAAT------------------------------------------------------ATATTTAACA-A--------------------ATATTACTGTTATGT----CCTCTTTCAGATACGGCGGCAAGCTATCAAAGATTTGCCAAAGCTATGTCAGGGCAACCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCCAAAGCTATGTCAGGGCA....2411.001010000
droGri2
ATACGGCGATTGATGCACAGTTCGATCTATGCGAAGATGATGATACACAAGTAAATAA-AATTG---A------AA------A--------A-----TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------GAATA---------C---------------------------------------ATATACAATA-AAA---AA-------------AAAC-ACTCT---GA----TCTCTTGCAGATACGTCGACAAGCCATTAAAGATTTGCCCAAGCTCTGTCAGGGCAATGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................GTTCGATCTATGCGAAGATGATGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101

Generated: 05/18/2015 at 08:58 PM