ID:

dsi_10545

 Coordinate:

2l:15816171-15816320 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.0 -14.3 -14.3

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAGAGGAATACTAAATTCAAAGCATCGCGGTGATCACAGATCATATCACAGCAAGGAAATATTTAAATTTTTAACAACGAAACCTTGAAAAAGTTGTAATATTTTCGAAAACAAAACGGGAACTGAGCCCAAATCATTTTTGTTAGCTTAAAATACGTGTGACACTTAACAGGGAACCCTTTTTTCAGTCAAAGAAAATTGATTGATTTTCTTTGTGATAGCAGAAAAATCCATAATTGTACTTAATTGA
**********************************************************************...(((((..............)))))..................(((.....(((((.((((.....))))...))))).....))).((((....((.(((....))).))....))))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
...............TTCAAAGCATCGCGGTGATCACAGA.................................................................................................................................................................................................................. 25 0 1 3.00 3 0 2 0 0 0 0 0 1 0 0
.......ATACTAAATTCAAAGCATCGCGGT........................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
............AAATTCAAAGCATCGCGGT........................................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
......................................................................TTAACAACGAAACCTTGAAAAAGT............................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............TTCAAAGCATCGCGGTGA......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................CAAAGCATCGCGGTGATCA...................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGATTGATTTTCTTTGTGATA.............................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........TACTAAATTCAAAGCATCGCGGTGA......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......ATACTAAATTCAAAGCATCGCGGG........................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................................AACAACGAAACCTTGAAAAA.............................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................CAAAGCATCGCGGTGATCACAGATCATA............................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTTTGTGATAGCAGAAAAATC................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................TCAAAGCATCGCGGTGATCAC..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................TCAAAGCATCGCGGTGATCACAGATCATA............................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AACAGGGAACCCTTTTTTCAGTCA........................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................ATTTTTAACAACGAAACCTTGAAAAAGT............................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................AACGGGAACTGAGCC......................................................................................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......AATACTAAATTCAAAGCATCGCGGT........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....GGAATACTAAATTCAAAGCATCGCGGT........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........CTAAATTCAAAGCATCGCGGT........................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................TTAAATTTTTAACAACGAAACCTTGAA................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TTCGAAAACAAAACGGGAACTGAGC.......................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................AAATACGTGTGACACTTAACAGGGAACCC....................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................GATCACAGATCATATCACAGCAAGGAAAT.............................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATTGATTTTCTTTGTGATAGCAGAA........................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................TTTCGAAAACAAAACGGGAACTGAGC.......................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................TCAAAGCATCGCGGTGAT........................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................TTTCGAAAACAAAACGGGAACTGA............................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.AGAGGAATACTAAATTCAAAGCATCGCGG............................................................................................................................................................................................................................ 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................TTTTCGAAAACAAAACGGGAACTGAGCCC........................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................TTCGAAAACAAAACGGGAACTGAGCC......................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................TATCACAGCAAGGAAATATTTAAATT..................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................TTGATTGATTTTCTTTGTGATAGCA........................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TTAAAATACGTGTGACACTTAACAGGGA........................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................TTGATTGATTTTCTTTGTGATAGCAGA......................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................TGTAATATTTTCGAAAACAAAACGGGA................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................AAACGGGAACTTAGCCCAAAT.................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........AATAAATTCAAAGCATCGCGGG........................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
............................................................................ACGAAACCTTGAAAAAGTTGTAATATT................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........CTAAATTCAAAGCATCGCGGTGAT........................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............ATTCAAAGCATCGCGGTGA......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................GATCACAGATCATATCACAGCAAG................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................GAAAACAAAACGGGAACTGA............................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................GAACCCTTTTTTCAGTCAAAG........................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................GTTGTAATATTTTCGA.............................................................................................................................................. 16 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0
..................AAAGCATTGCGGTGAACCCAGA.................................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................TGTAATATGGACGAAAACAAAAC..................................................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................TCAAAGACAGTTGATTGATT.......................................... 20 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0
....................................................AAGGAAATATTTAAAT...................................................................................................................................................................................... 16 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................CGTGGAACCCCTTTTTCAGT............................................................. 20 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................TTCTTTTTGATAGCAGGA........................ 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................TCAAAGACAGCTGATTGATTT......................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1
.............................................TAACAACAAGGACATATTTAA........................................................................................................................................................................................ 21 3 8 0.13 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................AAAATTGATCTATTTTCTTTGTT................................. 23 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0
.............................GTGATCACAGATCGT.............................................................................................................................................................................................................. 15 1 15 0.07 1 0 0 0 0 0 0 0 0 0 1
..................AAAGCAGGCCGGTGATCAC..................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TTCTCCTTATGATTTAAGTTTCGTAGCGCCACTAGTGTCTAGTATAGTGTCGTTCCTTTATAAATTTAAAAATTGTTGCTTTGGAACTTTTTCAACATTATAAAAGCTTTTGTTTTGCCCTTGACTCGGGTTTAGTAAAAACAATCGAATTTTATGCACACTGTGAATTGTCCCTTGGGAAAAAAGTCAGTTTCTTTTAACTAACTAAAAGAAACACTATCGTCTTTTTAGGTATTAACATGAATTAACT
***********************************************************...(((((..............)))))..................(((.....(((((.((((.....))))...))))).....))).((((....((.(((....))).))....))))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 O001
Testis
 M024
male body		 M053
female body
 SRR553487
NRT_0-2 hours eggs
.....................................................................................................................................................TTTTATGCACACTGTGAA................................................................................... 18 0 1 1.00 1 0 1 0 0 0
....................................................................AAAATTATTGCTTTGGAACTGT................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0
...................................................................AAAAATTGTTGTTATGGAACT.................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0
................................TAGTGTCTAGTTAAGTGTCA...................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 1 0 0
............................................................................................................................................................................................................................CGTCTTCTTAGGTATCCAC........... 19 3 20 0.05 1 0 0 0 0 1
...........................................................................................................................................................................................................................TCGTCTTTCAAGGTGTTAAC........... 20 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:15816121-15816370 - dsi_10545 AAGA--GGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGATCA-------CAGATCATATCAC------AGC----AA-GGAAATATTTAAATTT-------------------------------TTAACAACGAAACC-TTGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA------AAT----------------------CCATAATT-GTACTTAA------TTGA
droSec2 scaffold_5:4971066-4971315 - AAGA--GGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGATCA-------CAGATCATATCAC------AAC----AA-GGAAATATTTAAATTT-------------------------------TCAACAACGAAACC-TTGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA------AAT----------------------CCATAATT-GTACTTAA------TTGA
dm3 chr2L:16249275-16249527 - AAGA--AGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGATCA-------CAGATCATATCAC------AGC----AA-GGATATATTTAAATTT-------------------------------TTAACAACGAAACC-TTGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAAAAAATACGTGTG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA-----AAAT----------------------CCATAATT-GTACTTAA------TTGA
droEre2 scaffold_4929:7945869-7946091 - ACGA--GGAAAAC----------TAA-----------------------------------------------ATTTTGAAGCATCGTGGTGATCA-------CAGAATTTATCAC------AGG----AAGGGAAATATTTAAATTT-------------------------------TTATCAACGAAACCTAACAAA----------------------------------------------------------------------------AAACCTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAA--AATACGTGGG---A--CACTTAACGGGGAACCATTT-T-----------------------------------T--------CAGTCAAAGAA---AGT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA------AAT----------------------CCATAATT-GTACTTAA------TTG-
droYak3 2L:19081902-19082146 + ACAA--GGAAAAC----------TAA-----------------------------------------------A-TTTAAAGCATCGCGGTGATCA-------CAACTAATATCAC------AGC----AA-AGAAATATTTAAGTTT-------------------------------TTATCAACGAATCC-TAGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAACCTAAAACTGAGCC---------------CA---------AATCATTTT-----AGT-------TTCA--AATACGTGTG---A--CACTTAACGGGAAAACCTTT-T-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA------AAT----------------------CCATAATT-GTACTTAA------TTGA
droEug1 scf7180000404992:181038-181290 + AAGA--AAAACA-----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AA-GGAAATATTTTAATGT-------------------------------ATCACAACGAAA-TTGAGAAA----AAG-----------TTGTAATATTTTACAA-------------------------A---AAAAAAAAAAACACAAAGTGAATC---------------CA---------AATCATTTT-TG-TATC-------TTAA--AATACGCGTG---A--CACTTAACAGGGAATCATTTTT-----------------------------------T--------CGGTCACAGAA---AAT--TG-GT-TGACTTTCTTTGTGATAGAAGAAA------AAA----------------------CCAAAATT-GTACTTAA------TTAA
droBia1 scf7180000302408:1060414-1060664 + AAGC--AAAAAAC----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AA-GGAGATATTTTAATTT-------------------------------TTAACAACGAAA-CTGAGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACTAAAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTACAAAAAAAGTGTG---A--CACTTAACAGGGAATCATTT-T-----------------------------------T--------CGGTCACTAAA---AAT--TG-CT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAA------TTAA
droTak1 scf7180000415912:129144-129393 + AAGC--AAAAAAC----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AA-GGAGATATTTTAATTT-------------------------------TTAACAACGAAA-CTGAGAAA----AAG-----------TTGTAATATTTGCAAA-------------------------A-------AACAAAACTAAATCTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAATCATTT-T-----------------------------------T--------CGGTCACAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAT------TTAA
droEle1 scf7180000490579:1126179-1126431 + AAGA--AAAAAAC----------TAC-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AC-GAAGACATTTTAATTT-------------------------------ATAACAACGAAAGCTAAGAAA----AAG-----------TTATAACAGTTTCAAA-------------------------A--------ACGATAGTAAAACTGAACC---------------CA---------AATCATTTTTTGTTAGC-------TTAA-AAAAACGTGTG---A--CACTTAACAGGGAATCATTTTT-----------------------------------C--------GGGTCACAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAA------TTAA
droRho1 scf7180000779547:10345-10591 - AAGA--ACAAAAC----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CCGATCATATCAC------AGC----AA-GGATATATTTTAATTT-------------------------------ATAACAACGAAA-CTAAGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACTAAAACTAAACC---------------CA---------AATCATTT--TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAATCATTT-------------------------------------T--------CGGTCACAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAAAAGAAA------AAT----------------------CCAAAATT-GTACTTAA------TTAA
droFic1 scf7180000454078:183560-183811 - AAGAT-AAAAAAC----------TTA-----------------------------------------------A-TTTTTAGCATCGCAGTGATCG-------CAGATCATATCAC------GGC----AA-GGAGATATTTTAATTT-------------------------------ATAACAACGAAA-CTGAAAAA----AAG-----------TTGAAATATTTTCGAA-------------------------A--------ACAAAACTAAAACTGAACC---------------CT---------AATCATTTTTTGCTAAC-------TTAA--AACGCGTGTG---A--CACTTAACAGGGAATCATTT-T-----------------------------------T--------AGGTCACAGAA---AAT--TC-AT-TGATTTTCTTTGTGATAGAAGAAA-----AAAT----------------------CCACAATT-GTACTTAA------ATTA
droKik1 scf7180000302468:568633-568893 - AAGA--GGAATAC------------------------------------------------------------A-TTTTAAGCATCGCAGTGATCG-------TAGATCATATCAC------AGC----AG-GGACATATTTTTATTT-------------------------------ATCGCGACAAAG-CTGAAATG----AAA-----------TTGTAACAAAATCAAC---------------------------------------ATTTATTCTAAAA--------------ATCC---------AATCATTTT-CA----A-------TCGA--GAAACGAGTG---CTTAACTTAACAGGGAATCATTATTTTATGTGTGAGCAAGAAA--------------------------TCGTCAAAGGA---AAT--TG-AT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAAAT--ATTTAA
droAna3 scaffold_12916:140088-140331 - ATTA--GGA--------------------------------------------------------------------TTTTGCATCGCAGCGATCGCAGCTCGCAGATCATATCAC------AGA----A---GATACATTTTAAATT-------------------------------ATAGCATCGAAC-TTGAGG-G----AAA-----------TCGTAACATTTTCGAA--------------------A----A--------ACATTGCG-------GCAC---------------CA---------AATCGATTT-GAATAGA-------TTGA--AAATCGTGTG---A--CAC-TAACAGGGAATACTTTGT----GTGT--ATAAGAGA--------------------------GCGTCAAAGAA---AAC--AA-AT-CAATTTTCTTTGTGATAGAAGAA--------------------------------CCCCAATT-GTACTTAA------TTAT
droBip1 scf7180000396554:2140559-2140789 + CAAA--AGATC----------------------------------------------------------------------------------TAG-------CAGATCATATCAC------AGA----AA-GGATAAACATTAAATT-------------------------------CTAGCATCGAAC-TTGA--AG----AAGAAGCTACTTGATTGTAACATTTTCTAC-------------------------A--------CC-----------CCACCC---------------CG------GG-AATCATTTT-GATTAGA-------T-----------TGTG---A--CACTTAACAGGGAATACTACTATTGTGTGTGTGTT----------------------T--------ACGTCAAAGAA---AAC--AA-AT-CAATTTTCTTTGTGATAGAAGAAA-----AAAT----------------------CCAAAATT-GTACTTAA------TTAA
dp5 4_group1:3577925-3578185 + GAGA--AGGAGAGGG----A------G-AGAGAGAGAGAGAGAGCGGAAGCAGCAAAATCTACACCCCCTTACATTTTTTAGCATCGCAGC-ATCG-------T-CTTCATATCAT------CGCTGAAAA-GGAAATCTTATTA-TT-------------------------------GTAACATCGAAAACTGAAAAAAAAAACG-----------TTGTTAAAT--CCGAG-------------------------A--------GATAAACTGAA-----------------------------------------------------------------------------A---AACTAACAGGGATTTAA--------------------------------------------------TTCACGGAA---ATT--TTCATACCATTTTCTTTGTGATAGAAGAAAAAAA-AAAT----------------------CTACAATTTGTACTTAA------ATTA
droPer2 scaffold_5:1635327-1635586 - GAGA--AGGAGAGGG----A------G-AGAGA----GAGAGAGCGGAAGCAGCAAAATCTACACCCCCTTACATTTTTTAGCATCGCAGC-ATCG-------T-CTTCATATCAT------CGCTGAAAA-GGAAATCTTATTA-TT-------------------------------GTAACATCGAAAACTGAAAAA---CACG-----------TTGTTAAAT--CCGAG-------------------------A--------GATAAACTGAA-----------------------------------------------------------------------------A---AACTAACAGGGATTTAA--------------------------------------------------TTCACGGAA---ATT--TTCATACCATTTTCTTTGTGATAGAAGAAAAAAA-AAAT----------------------CTACAATTCGTACTTAAATTAATTTTA
droWil2 scf2_1100000004521:5143269-5143552 - AAAA--AAAATAC----------AAT-----------------------------------------------A-A-CAATTTCTTTTGGTGAACG-------CAGTTCATATCAAAATTATATTTAA-AA--AACAAAATTAAAATT-A--------------------TTTTTAAATTTAGCAACGAAA-------------AAA-----------TTGTAAA------GAA-------------------ACAA--C---AAAAGAGAAAACAAAA---AAACCCATTTTTGTAAATCATA---------AATCATTTT-----AAA-------TTAA-AACTAAGTGAG---A--GAC---ACAGGGATATATTATTTTGTTTGT--TTT----------------------T------GAATGTCAAGGAT---AAT--AC-AT-TGAGTTTCCTTGTGATAAAGAGTTT-A--AGAC----------------------GCAAAATT-GTTTGTAC------TTAA
droVir3 scaffold_12723:2848075-2848320 + AAGT--ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GAGTTCATATCAC------GAG----GA--GACACATTTAAAATT-AGGTTGCCGCAACGAAAA-----------------------GTT-TGGAAA----CAA-----------CAATAAAGTAATTGGC-------------------------G--------A-GGAGCAGCAGCTGCACT---------------CGAAATAAATA-AGTTTTTG-GGATAGA-------TTCG-CGTTAGTTGCG---A--TA-TTAACAGGGAATTTTTA--AAATA--------GCCG-------------TCTTTTGGGTT---GAGACACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACTTAA------TTA-
droMoj3 scaffold_6500:16115404-16115701 + ATTA--GGAGCAG-TCCCGAGCGAAA-----------------------------------------------G-TTTTTAACGTCTGGGTGAACT-------GAGTTCATATCAC------AAA----GA-AATCACATTTAACCGT-AGGGTGCCACAACGAAAAGTGTTTGG-------------------AAACAA----GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGCAGCAACTGCGCC---------------TGAAATAAATT---TAA-TT-CGATAGATTCGCCGATAG--ATTCGATATAGCGA---AATTCACAGGGATTTTTACTAG-------------ACG-------------------GGGTT---GAGGCACAGCAAAAAATACT---T-ATATATTTTTTGTGATAACCGTTTTGAAGATAT----------------------CCAAAATTTGTACTTAA------TT--
droGri2 scaffold_15126:642209-642556 - AAATCACGAGGAG-TCAGGAGCTAAAGCAAAAA----------------------------------------A-AGAGAAAGGTCTGGATGAACG-------GAGTTCATATCAC------GAA----AG-GAATACATTCAACGTATTGGAAG-------------------------CAACAACGAAA-------CA----GTG-----------TTGAAAAACA-TCAAAACCAGCTAATTGTAATTAGAGAGAGAGAGGAGAGGAGAAACACCAACTGCACT---------------CGAAATAATTA---AAA-AT-TGATAGA-------TT--------------------CGCGTAACAGGGATTTTTTTTGATATA--------GGCGACGGTCTTCTACTTCTTTGGGGCTAAGAAGACGCAGAA---AAT--TC-GT-AAATTTCG--TGTGATAAGAATTAGGA-----GGGAAAAATACCCAACAACAACAACAAAATT-GTACTTAA------TTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGA--GGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGATCA-------CAGATCATATCAC------AGC----AA-GGAAATATTTAAATTT-------------------------------TTAACAACGAAACC-TTGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA------AAT----------------------CCATAATT-GTACTTAA------TTGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................TTCAAAGCATCGCGGTGATCA-------CAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000002010000000
.........ATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
........................AA-----------------------------------------------A-TTCAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
...................................................................................................................................................................................TTAACAACGAAACC-TTGAAA----AAG-----------T.........................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...........................................................................TTCAAAGCATCGCGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................CAAAGCATCGCGGTGATCA-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AT-TGATTTTCTTTGTGATA.................................................................2111.00100100000000000000
..........TAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.........ATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................AACAACGAAACC-TTGAAA----AA......................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.............................................................................CAAAGCATCGCGGTGATCA-------CAGATCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTGATAGCAGAAA------AAT----------------------C..........................2111.00100010000000000000
............................................................................TCAAAGCATCGCGGTGATCA-------C............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
............................................................................TCAAAGCATCGCGGTGATCA-------CAGATCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................AACAGGGAACCCTTTTT-----------------------------------T--------CAGTCA.....................................................................................................2411.00100000001000000000
................................................................................................................................................ATTT-------------------------------TTAACAACGAAACC-TTGAAA----AAG-----------T.........................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
................................................................................................................................................................................................................................................................................AACGGGAACTGAGCC---------------......................................................................................................................................................................................................................................1511.00100000001000000000
........AATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
......GGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
............C----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............................................................................................................................................TTAAATTT-------------------------------TTAACAACGAAACC-TTGAA.............................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................................................................................................................................................................................................................................TTCGAA-------------------------A--------ACAAAACGGGAACTGAGC......................................................................................................................................................................................................................................................2511.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................A--AATACGTGTG---A--CACTTAACAGGGAACCC............................................................................................................................................................2911.00100010000000000000
...........................................................................................GATCA-------CAGATCATATCAC------AGC----AA-GGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TGATTTTCTTTGTGATAGCAGAA...........................................................2511.00100010000000000000
...................................................................................................................................................................................................................................TTTCGAA-------------------------A--------ACAAAACGGGAACTGAGC......................................................................................................................................................................................................................................................2611.00100000010000000000
............................................................................TCAAAGCATCGCGGTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...................................................................................................................................................................................................................................TTTCGAA-------------------------A--------ACAAAACGGGAACTGA........................................................................................................................................................................................................................................................2411.00100010000000000000
.AGA--GGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..................................................................................................................................................................................................................................TTTTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------C.....................................................................................................................................................................................................................................2911.00100000001000000000
....................................................................................................................................................................................................................................TTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------......................................................................................................................................................................................................................................2611.00100000001000000000
..............................................................................................................TATCAC------AGC----AA-GGAAATATTTAAATT.................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TG-AT-TGATTTTCTTTGTGATAGCA..............................................................2511.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................TTAA--AATACGTGTG---A--CACTTAACAGGGA................................................................................................................................................................2811.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2711.00100000000100000000
...........................................................................................................................................................................................................................TGTAATATTTTCGAA-------------------------A--------ACAAAACGGGA.............................................................................................................................................................................................................................................................2711.00100000001000000000
.........................................................................................................................................................................................ACGAAACC-TTGAAA----AAG-----------TTGTAATATT................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
............C----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.........................................................................A-TTCAAAGCATCGCGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...........................................................................................GATCA-------CAGATCATATCAC------AGC----AA-G...............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................................................GAA-------------------------A--------ACAAAACGGGAACTGA........................................................................................................................................................................................................................................................2011.00100001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GAACCCTTTTT-----------------------------------T--------CAGTCAAAG..................................................................................................2111.00100010000000000000
..............................................................................................................................................................................................................G-----------TTGTAATATTTTCGA...........................................................................................................................................................................................................................................................................................................1620.50100000010000000000
.................................................................................................................................AA-GGAAATATTTAAAT..................................................................................................................................................................................................................................................................................................................................................................................................1640.25100000000010000000
droSec2
AAGA--GGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGATCA-------CAGATCATATCAC------AAC----AA-GGAAATATTTAAATTT-------------------------------TCAACAACGAAACC-TTGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA------AAT----------------------CCATAATT-GTACTTAA------TTGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........ATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2612.0020110
...................................................................................ATCGCGGTGATCA-------CAGATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...................................................................................................................................................................................................................................................................A--------ACAAAACGGGAACTGAGC......................................................................................................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................TAACAGGGAACCCTTTTT-----------------------------------T--------CAGT.......................................................................................................2311.0010010
...........................................................................................................................................................................................................................................................................................................................................................CGTGTG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------....................................................................................................................2911.0010100
....................................................................................................................................................................................................................................................................................................................................................A--AATACGTGTG---A--CACTTAACAGGG.................................................................................................................................................................2411.0010010
......................................................................................................................................................................................................AA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACA.....................................................................................................................................................................................................................................................................2511.0010010
.................................................................................................................................................................................................................................ATTTTCGAA-------------------------A--------ACAAAACGG...............................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................A--AATACGTGTG---A--CACTTAACAGGGAACC.............................................................................................................................................................2811.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2711.0010010
.......................................................................................................................................................................................................................................................................................................................................................AATACGTGTG---A--CACTTAACAGGGAACC.............................................................................................................................................................2711.0010100
........................................................................................................................................................................................AACGAAACC-TTGAAA----AAG-----------T.........................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................C------AAC----AA-GGAAATATTTAAA...................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........TAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
...................................................................................................................................................................................................................................TTTCGAA-------------------------A--------ACAAAACGGGAACTGA........................................................................................................................................................................................................................................................2411.0010010
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACAGGGAACC.............................................................................................................................................................2611.0010100
.......................................................................................................................................................................................................................................................................................................................................................AATACGTGTG---A--CACTTAACAGGGA................................................................................................................................................................2411.0010100
..........................................................................................................................................................................................................................................................................................................................ATCATTTT-TGTTAGC-------TTAA--A............................................................................................................................................................................................2011.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AT-TGATTTTCTTTGTGATAGCAGAA...........................................................2611.0010010
............C----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...............................................................................AAGCATCGCGGTGATCA-------CAGATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTTGTGATAGCAGAAA------....................................................2011.0010010
.........................................................................A-TTCAAAGCATCGCGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................................................................................................................................................................................................................TG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------...........................................................................................................2611.0010010
....................................................................................................................................................................................................................................................................................................................................GTTAGC-------TTAA--AATACGTGTG---A--CAC..........................................................................................................................................................................2411.0011000
dm3
AAGA--AGAATAC----------TAA-----------------------------------------------A-TTCAAAGCATCGCGGTGATCA-------CAGATCATATCAC------AGC----AA-GGATATATTTAAATTT-------------------------------TTAACAACGAAACC-TTGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAAAAAATACGTGTG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA-----AAAT----------------------CCATAATT-GTACTTAA------TTGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................AAAACGGGAACTGAGCC---------------CA---------AATC.......................................................................................................................................................................................................................23111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AAAGCATCGCGGTGATCA-------CAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TACGTGTG---A--CACTTAACAGGGAACCC............................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000102000
..............................................................................................................................................................................................................................................................................................................................................................GTG---A--CACTTAACAGGGAACCCTTT.........................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ACTTAACAGGGAACCCTTTTT-----------------------------------T--------C..........................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TT-------------------------------TTAACAACGAAACC-TTGAAA----AAG-----------T.........................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AT-TGATTTTCTTTGTGATAGC...............................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...........................................................................TTCAAAGCATCGCGGTGATCA-------CAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AT-TGATTTTCTTTGTGATAGCAGAA...........................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GTGTG---A--CACTTAACAGGGAAC..............................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................G---A--CACTTAACAGGGAACCCTTTTT-----------------------------------T--------...........................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------C.....................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TACGTGTG---A--CACTTAACAGGGA................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................................................TTCAAAGCATCGCGGTGATCA-------CAGATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AT-TGATTTTCTTTGTGAT..................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CGTGTG---A--CACTTAACAGGGAACC.............................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ACGTGTG---A--CACTTAACAGGGAAC..............................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTCAAAGCATCGCGGTGATCA-------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TG-AT-TGATTTTCTTTGTGAT..................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CATTTT-TGTTAGC-------TTAAAAAATAC........................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GAACTGAGCC---------------CA---------AATCATTTT-T................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACAGGGA................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................A--------ACAAAACGGGAACTGAGCC---------------C.....................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CGTGTG---A--CACTTAACAGGGAACCC............................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TGTG---A--CACTTAACAGGGAACCCTTT.........................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000
..............................................................................AAAGCATCGCGGTGATCA-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGAA---AAT--TG-AT-TGATT.............................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACAGGGAACCC............................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................................................TCAC------AGC----AA-GGATATATTTAAATTT-------------------------------TT...............................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AATACGTGTG---A--CACTTAACAGGGA................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG-AT-TGATTTTCTTTGTGATAGCAG.............................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TGTTAGC-------TTAAAAAATACGTGTG---A--CAC..........................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAAA-----AAAT----------------------CCATAATT-GTACTT............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CGTGTG---A--CACTTAACAGGG.................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTCAAAGCATCGCGGTGATCA-------CAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AAAGCATCGCGGTGATCA-------CAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................TTCGAA-------------------------A--------ACAAAACGGGAACTGAGCC---------------......................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ATTTT-TGTTAGC-------TTAAAAAAT..........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................CATCGCGGTGATCA-------CAGATCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................CGGGAACTGAGCC---------------CA---------AATC.......................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AAAGCATCGCGGTGATCA-------CAGATCATATC..................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ACCCTTTTT-----------------------------------T--------CAGTCAAAGAA---.............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCAGAAA-----AAAT----------------------CCATAATT-GTAC..............2612.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTCGAA-------------------------A--------ACAAAACGGGAACTGAGC......................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TG---A--CACTTAACAGGGAACCCTTTTT-----------------------------------....................................................................................................................2512.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................G---A--CACTTAACAGGGAACC.............................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTTCTTTGTGATAGCAGAAA-----AAA..................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................AACCTGAGCC---------------CA---------AATCATTTT-TGTT.............................................................................................................................................................................................................2515.0050100310
....................................................................................................................................................................................................................................................................................AAACCTGAGCC---------------CA---------AATCATTTT-TGTT.............................................................................................................................................................................................................2613.0033000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--TG-AT-TGATTTTCTTTGTGATAGCA..............................................................2613.0030000030
............................................................................................................................................................................................................................................................................................................................................................GTGGG---A--CACTTAACGGGGAACC.............................................................................................................................................................2212.0021001000
...........................................................................................GATCA-------CAGAATTTATCAC------AGG----AAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................2712.0020100100
........................AA-----------------------------------------------ATTTTGAAGCATCGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000020
....................................................................................................................................................................................................................................................................................AAACCTGAGCC---------------CA---------AATCATTTT-TGT..............................................................................................................................................................................................................2511.0010010000
.....................................................................................................................................................................................................................................................................................AACCTGAGCC---------------CA---------AATCATTTT-TGT..............................................................................................................................................................................................................2411.0010000100
.CGA--GGAAAAC----------TAA-----------------------------------------------ATTTTGAAGCATCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
...............................................................................................................ATCAC------AGG----AAGGGAAATATTTAAATTT-------------------------------T................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
..............................................................................................CA-------CAGAATTTATCAC------AGG----AAG................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
....................................................................................................................................................................................................................................................................................AAACCTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------...................................................................................................................................................................................................2911.0010100000
.............................................................................................TCA-------CAGAATTTATCAC------AGG----AAGG...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000
............................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------T--------CAGTCAAAGAA---AGT--TG-AT-T.................................................................................2111.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTGTGATAGCAGAAA------A...................................................2011.0010001000
............................................................................................................TTTATCAC------AGG----AAGGGAAATA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......................................................................................................................................................................................................A----------------------------------------------------------------------------AAACCTGAGCC---------------CA---------AATCATTTT-TGTT.............................................................................................................................................................................................................2711.0010100000
..........................................................................................................................................................................................................................................................................................................................ATCATTTT-TGTTAGC-------TTAA--A............................................................................................................................................................................................2011.0010000100
.........................................................................................................................................................................................................................................................................................................................................................TACGTGGG---A--CACTTAACGGGGA................................................................................................................................................................2211.0010000100
.........AAAC----------TAA-----------------------------------------------ATTTTGAAGCATCGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
......................................................................................................................................................................................................................................................................................ACCTGAGCC---------------CA---------AATCATTTT-TGTT.............................................................................................................................................................................................................2411.0010000010
......................................................................................................................................................................................................AA----------------------------------------------------------------------------AAACCTGAGCC---------------CA---------AATCA......................................................................................................................................................................................................................2011.0010000100
..........................................................................................................AATTTATCAC------AGG----AAGGGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
..............................................................................................................TATCAC------AGG----AAGGGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
............................................................................................................................................................................................................................................................................................................................................................GTGGG---A--CACTTAACGGGG.................................................................................................................................................................1811.0010000100
.......GAAAAC----------TAA-----------------------------------------------ATTTTGAAGCATCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
...........................................................................................GATCA-------CAGAATTTATCAC------AGG----AAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.........................................................................................................GAATTTATCAC------AGG----AAGG...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................TAACGGGGAACCATTT-T-----------------------------------T--------CA.........................................................................................................2011.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---AGT--TG-AT-TGATTTTCTTT.......................................................................2011.0011000000
.........................................................................ATTTTGAAGCATCGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.............................................................................TGAAGCATCGTGGTGATCA-------CAGAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................................................................................................TTATCAC------AGG----AAGGGAAATAT........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...........AC----------TAA-----------------------------------------------ATTTTGAAGCATCGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
....................................................................................................................................................................................................................................................................................................................................GTTAGC-------TTAA--AATACGTGGG---A--C............................................................................................................................................................................2211.0010000010
.........................................................................ATTTTGAAGCATCGTGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..............................................................................................CA-------CAGAATTTATCAC------AGG----AAGGGAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
................................................................................................................................................ATTT-------------------------------TTATCAACGAAACCTAACAAA----------------------------------------------------------------------------................................................................................................................................................................................................................................................................2511.0010000010
............................................................................................ATCA-------CAGAATTTATCAC------AGG----AAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................................................AACGGGGAACCATTT-T-----------------------------------T--------CAGTC......................................................................................................2211.0010100000
................................................................................................................................................................................................................................................................................................................................TT-TGTTAGC-------TTAA--AATACGTGGG---A--.............................................................................................................................................................................2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................T-T-----------------------------------T--------CAGTCAAAGAA---AGT--TG-.....................................................................................1911.0011000000
..........AAC----------TAA-----------------------------------------------ATTTTGAAGCATCGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.......................................................................................................................................................................................................................................................................................................................................AGC-------TTAA--AATACGTGGG---A--CACT.........................................................................................................................................................................2211.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGATAGCAGAAA------AAT----------------------CCATAATT-..................2611.0010000010
...............................................................................................................ATCAC------AGG----AAGGGAAATAT........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..............................................................................................CA-------CAGAATTTATCAC------AGG----AAGGGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.............................................................................................................TTATCAC------AGG----AAGGGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
............................................................................TTGAAGCATCGTGGTGATCA-------CAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--TG-AT-TGATTTTCTTTGTGAT..................................................................2211.0010000010
.........................................................................ATTTTGAAGCATCGTGGTGATCA-------CAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...............................................................................................................................................................................................................................................................................................................................TTT-TGTTAGC-------TTAA--AATACGTGGG---A--CAC..........................................................................................................................................................................2811.0011000000
.........................A-----------------------------------------------ATTTTGAAGCATCGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......................................................................................................................................................................................................................................................................................................................................................AATACGTGGG---A--CACTTAACGGGGAACC.............................................................................................................................................................2711.0010000010
droYak3
ACAA--GGAAAAC----------TAA-----------------------------------------------A-TTTAAAGCATCGCGGTGATCA-------CAACTAATATCAC------AGC----AA-AGAAATATTTAAGTTT-------------------------------TTATCAACGAATCC-TAGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAACCTAAAACTGAGCC---------------CA---------AATCATTTT-----AGT-------TTCA--AATACGTGTG---A--CACTTAACGGGAAAACCTTT-T-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGCAGAAA------AAT----------------------CCATAATT-GTACTTAA------TTGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................GATCA-------CAACTAATATCAC------AGC----...................................................................................................................................................................................................................................................................................................................................................................................................................2117.00707000000000
.......................................................................................................................................................................................................................................................................................................................................................AATACGTGTG---A--CACTTAACGGGAA................................................................................................................................................................2415.00500000010004
........................AA-----------------------------------------------A-TTTAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00401100020000
.................................................................................................................................................................................................................................................................................................................................................TTCA--AATACGTGTG---A--CACTTAACGGGA.................................................................................................................................................................2713.00301000020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTTTGTGATAGCAGA............................................................1912.00201000010000
...........AC----------TAA-----------------------------------------------A-TTTAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00210000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2812.00202000000000
....................................................................................................................................................................................................................................................................................................................................................A--AATACGTGTG---A--CACTTAACGGGA.................................................................................................................................................................2412.00200000020000
.........................................................................................................................................................................................................................................................................................................................................................................CTTAACGGGAAAACCTTT-T-----------------------------------T--------...........................................................................................................2012.00200000020000
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACGGGAA................................................................................................................................................................2312.00201000010000
.......................................................................................................................................................................................CAACGAATCC-TAGAAA----AAG-----------T.........................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................CA--AATACGTGTG---A--CACTTAACGGGA.................................................................................................................................................................2511.00100000010000
...............................................................................................................ATCAC------AGC----AA-AGAAATATTTAAGT..................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................AATACGTGTG---A--CACTTAACGGGAAA...............................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................A----AAG-----------TTGTAATATTTTCGA...........................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................GTG---A--CACTTAACGGGAAAACCTTT-T-----------------------------------....................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................GTAATATTTTCGAA-------------------------A--------ACAAACCTAAAAC...........................................................................................................................................................................................................................................................2811.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG-AT-TGATTTTCTTTGTGA...................................................................2111.00100100000000
............C----------TAA-----------------------------------------------A-TTTAAAGCATCGCGGTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................TACGTGTG---A--CACTTAACGGG..................................................................................................................................................................2011.00101000000000
..................................................................................................................................................TT-------------------------------TTATCAACGAATCC-TAGA..............................................................................................................................................................................................................................................................................................................................................2011.00100100000000
............C----------TAA-----------------------------------------------A-TTTAAAGCATCGCGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
........................................................................................................................................................................................AACGAATCC-TAGAAA----AAG-----------T.........................................................................................................................................................................................................................................................................................................................1911.00100000010000
........................................................................................................AACTAATATCAC------AGC----AA-AGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG-AT-TGATTTTCTTTGTGATAGC...............................................................2511.00100100000000
...................................................................................................................................................................................................................................................................A--------ACAAACCTAAAACTGAGCC---------------CA---------...........................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................CTTAACGGGAAAACCTTT-T-----------------------------------T--------CAGTCAAA...................................................................................................2811.00100000010000
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACGGGAAA...............................................................................................................................................................2411.00100000010000
...........................................................................................................................GC----AA-AGAAATATTTAAGT..................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACGGGAAAACC............................................................................................................................................................2711.00100100000000
..............................................................................................................TATCAC------AGC----AA-AGAAATATT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................A-TTTAAAGCATCGCGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2611.00100000010000
.......................................................................................................................................................................................................................................................................................................................................AGT-------TTCA--AATACGTGTG---A--C............................................................................................................................................................................1911.00101000000000
................................................................................AGCATCGCGGTGATCA-------CAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................CACTTAACGGGAAAACCTTT-T-----------------------------------T--------...........................................................................................................2211.00100000010000
..........................................................................................................CTAATATCAC------AGC----AA-AGAA............................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2711.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG-AT-TGATTTTCTTTGTGATAGCAGAA...........................................................2911.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--TG-AT-TGATTTTCTTTGTGATAGCAGA............................................................2911.00100000010000
...............................................................................................................................................................................................................................................................................AACCTAAAACTGAGCC---------------CA---------AA.........................................................................................................................................................................................................................2011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................G---A--CACTTAACGGGAAAACCTTT-T-----------------------------------T--------...........................................................................................................2411.00100000010000
...............................................................................AAGCATCGCGGTGATCA-------CAACTAATAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................ACGTGTG---A--CACTTAACGGGAA................................................................................................................................................................2111.00100000010000
.....................................................................................................................................................................................ATCAACGAATCC-TAGAAA----AAG-----------T.........................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........AAAC----------TAA-----------------------------------------------A-TTTAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................T-T-----------------------------------T--------CAGTCAAAGAA---AAT--TG-AT-T.................................................................................2211.00100100000000
................................................................................................................................................................................................................................................................................................................................................................G---A--CACTTAACGGGAAAACCTTT-T-----------------------------------T--------C..........................................................................................................2511.00101000000000
.........................A-----------------------------------------------A-TTTAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
..........AAC----------TAA-----------------------------------------------A-TTTAAAGCATCGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................AACGAATCC-TAGAAA----AAG-----------TTGT......................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................GATCA-------CAACTAATATCAC------AGC----A..................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACGGGA.................................................................................................................................................................2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGAA---AAT--TG-AT-TGATTTTC..........................................................................2411.00100000010000
................................................................................................................................................................................................................................................................................................................................................................G---A--CACTTAACGGGAAAACCTTT-........................................................................................................................................................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................CA--AATACGTGTG---A--CACTTAACGGGAA................................................................................................................................................................2611.00101000000000
...........................................................................................................................GC----AA-AGAAATATTTAAGTTT-------------------------------T................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................AATACGTGTG---A--CACTTAACGGGA.................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................ATACGTGTG---A--CACTTAACGG...................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................................................A-------------------------A--------ACAAACCTAAAACTGAGC......................................................................................................................................................................................................................................................2011.00100010000000
.................................................................................................................CAC------AGC----AA-AGAAATATTTAAGTT.................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........................................................................................................................AGC----AA-AGAAATATTTAAGTTT-------------------------------.................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................AAACCTTT-T-----------------------------------T--------CAGTCAAAGAA---.............................................................................................2111.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG-AT-TGATTTTCTTTGTGATAGCAG.............................................................2711.00101000000000
...........................................................................TTTAAAGCATCGCGGTGATCA-------C............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
................................................................................................................................................................................................................................................................................................................................................................G---A--CACTTAACGGGAAAACCTTT-T-----------------------------------T--------CA.........................................................................................................2611.00101000000000
droEug1
AAGA--AAAACA-----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AA-GGAAATATTTTAATGT-------------------------------ATCACAACGAAA-TTGAGAAA----AAG-----------TTGTAATATTTTACAA-------------------------A---AAAAAAAAAAACACAAAGTGAATC---------------CA---------AATCATTTT-TG-TATC-------TTAA--AATACGCGTG---A--CACTTAACAGGGAATCATTTTT-----------------------------------T--------CGGTCACAGAA---AAT--TG-GT-TGACTTTCTTTGTGATAGAAGAAA------AAA----------------------CCAAAATT-GTACTTAA------TTAASizeHit CountTotal NormTotal
No Reads
droBia1
AAGC--AAAAAAC----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AA-GGAGATATTTTAATTT-------------------------------TTAACAACGAAA-CTGAGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACTAAAACTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTACAAAAAAAGTGTG---A--CACTTAACAGGGAATCATTT-T-----------------------------------T--------CGGTCACTAAA---AAT--TG-CT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAA------TTAASizeHit CountTotal NormTotal
No Reads
droTak1
AAGC--AAAAAAC----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AA-GGAGATATTTTAATTT-------------------------------TTAACAACGAAA-CTGAGAAA----AAG-----------TTGTAATATTTGCAAA-------------------------A-------AACAAAACTAAATCTGAGCC---------------CA---------AATCATTTT-TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAATCATTT-T-----------------------------------T--------CGGTCACAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAT------TTAASizeHit CountTotal NormTotal
No Reads
droEle1
AAGA--AAAAAAC----------TAC-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CAGATCATATCAC------AGC----AC-GAAGACATTTTAATTT-------------------------------ATAACAACGAAAGCTAAGAAA----AAG-----------TTATAACAGTTTCAAA-------------------------A--------ACGATAGTAAAACTGAACC---------------CA---------AATCATTTTTTGTTAGC-------TTAA-AAAAACGTGTG---A--CACTTAACAGGGAATCATTTTT-----------------------------------C--------GGGTCACAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAA------TTAASizeHit CountTotal NormTotal
No Reads
droRho1
AAGA--ACAAAAC----------TAA-----------------------------------------------A-TTTTTAGCATCGCGGTGATCG-------CCGATCATATCAC------AGC----AA-GGATATATTTTAATTT-------------------------------ATAACAACGAAA-CTAAGAAA----AAG-----------TTGTAATATTTTCGAA-------------------------A--------ACAAAACTAAAACTAAACC---------------CA---------AATCATTT--TGTTAGC-------TTAA--AATACGTGTG---A--CACTTAACAGGGAATCATTT-------------------------------------T--------CGGTCACAGAA---AAT--TG-AT-TGATTTTCTTTGTGATAAAAGAAA------AAT----------------------CCAAAATT-GTACTTAA------TTAASizeHit CountTotal NormTotal
No Reads
droFic1
AAGAT-AAAAAAC----------TTA-----------------------------------------------A-TTTTTAGCATCGCAGTGATCG-------CAGATCATATCAC------GGC----AA-GGAGATATTTTAATTT-------------------------------ATAACAACGAAA-CTGAAAAA----AAG-----------TTGAAATATTTTCGAA-------------------------A--------ACAAAACTAAAACTGAACC---------------CT---------AATCATTTTTTGCTAAC-------TTAA--AACGCGTGTG---A--CACTTAACAGGGAATCATTT-T-----------------------------------T--------AGGTCACAGAA---AAT--TC-AT-TGATTTTCTTTGTGATAGAAGAAA-----AAAT----------------------CCACAATT-GTACTTAA------ATTASizeHit CountTotal NormTotal
No Reads
droKik1
AAGA--GGAATAC------------------------------------------------------------A-TTTTAAGCATCGCAGTGATCG-------TAGATCATATCAC------AGC----AG-GGACATATTTTTATTT-------------------------------ATCGCGACAAAG-CTGAAATG----AAA-----------TTGTAACAAAATCAAC---------------------------------------ATTTATTCTAAAA--------------ATCC---------AATCATTTT-CA----A-------TCGA--GAAACGAGTG---CTTAACTTAACAGGGAATCATTATTTTATGTGTGAGCAAGAAA--------------------------TCGTCAAAGGA---AAT--TG-AT-TGATTTTCTTTGTGATAGAAGAAA------AAT----------------------CCAAAATT-GTACTTAAAT--ATTTAASizeHit CountTotal NormTotal
No Reads
droAna3
ATTA--GGA--------------------------------------------------------------------TTTTGCATCGCAGCGATCGCAGCTCGCAGATCATATCAC------AGA----A---GATACATTTTAAATT-------------------------------ATAGCATCGAAC-TTGAGG-G----AAA-----------TCGTAACATTTTCGAA--------------------A----A--------ACATTGCG-------GCAC---------------CA---------AATCGATTT-GAATAGA-------TTGA--AAATCGTGTG---A--CAC-TAACAGGGAATACTTTGT----GTGT--ATAAGAGA--------------------------GCGTCAAAGAA---AAC--AA-AT-CAATTTTCTTTGTGATAGAAGAA--------------------------------CCCCAATT-GTACTTAA------TTATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................GT--ATAAGAGA--------------------------GCGTCAAAGA.................................................................................................2018.008013031
........................................................................................................................................................................................ATCGAAC-TTGAGG-G----AAA-----------TCGTAACATT................................................................................................................................................................................................................................................................................................................2712.002000002
................................................................................................................................................................................................................................................................................................................................................................G---A--CAC-TAACAGGGAATACTTTGT----GTGT--.............................................................................................................................................2712.002001010
....................................................................................................................................................................................TAGCATCGAAC-TTGAGG-G----A.......................................................................................................................................................................................................................................................................................................................................1912.002100010
...................................................................................................................................................................................ATAGCATCGAAC-TTGAGG-G----AAA-----------T.........................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................T--ATAAGAGA--------------------------GCGTCAAAGA.................................................................................................1911.001001000
............................................................................................................................................................................................................................................................................................................................................................................AACAGGGAATACTTTGT----GTGT--AT...........................................................................................................................................2311.001000010
....................................................................................................................................................................................................................................TTCGAA--------------------A----A--------ACATTGCG-------GCAC---------------A.....................................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................................ATAGCATCGAAC-TTGAGG-G----AA......................................................................................................................................................................................................................................................................................................................................2111.001000010
..............................................................................................................................................................................................................................................................................ATTGCG-------GCAC---------------CA---------AATCGATTT-GA...............................................................................................................................................................................................................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................GT----GTGT--ATAAGAGA--------------------------GCGTCAAAGA.................................................................................................2411.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................AGAGA--------------------------GCGTCAAAGAA---AAC--AA-AT-CA................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAGA--------------------------GCGTCAAAGA.................................................................................................1811.001001000
ATTA--GGA--------------------------------------------------------------------TTTTGCATCGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.........................................................................................................................................................................................................................................................................................................................................A-------TTGA--AAATCGTGTG---A--CAC-T........................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGATAGAAGAA--------------------------------CCCCAATT-..................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAGA--------------------------GCGTCAAAGAA---.............................................................................................1911.001000010
....................................................................................TCGCAGCGATCGCAGCTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................GA-------TTGA--AAATCGTGTG---A--CAC-T........................................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................ATAGA-------TTGA--AAATCGTGTG---A--CA...........................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................GTGT--ATAAGAGA--------------------------GCGTCAAAGAA---AAC--........................................................................................2611.001000010
.....................................................................................................................................GATACATTTTAAATT-------------------------------ATAGCATC.........................................................................................................................................................................................................................................................................................................................................................2311.001010000
...................................................................................................................................................................................................................................................................A--------ACATTGCG-------GCAC---------------CA---------AATC.......................................................................................................................................................................................................................1911.001010000
.......GA--------------------------------------------------------------------TTTTGCATCGCAGCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................................................................................................GCTCGCAGATCATATCAC------AGA----A---G..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................AATAGA-------TTGA--AAATCGTGT....................................................................................................................................................................................1911.001000010
....................................................................................................................................................................................................................................TTCGAA--------------------A----A--------ACATTGCG-------GCAC---------------C.....................................................................................................................................................................................................................................2111.001000001
..............................................................................TTTGCATCGCAGCGATCGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................................................................................................AATT-------------------------------ATAGCATCGAAC-TTGAGG-G----AAA-----------TC........................................................................................................................................................................................................................................................................................................................2811.001100000
........................................................................................................................................................................................ATCGAAC-TTGAGG-G----AAA-----------TC........................................................................................................................................................................................................................................................................................................................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................ATCGTGTG---A--CAC-TAACAGGGAATACT...........................................................................................................................................................2611.001010000
...........................................................................................................................................................................................................................................................................................................................TCGATTT-GAATAGA-------TTGA--AA...........................................................................................................................................................................................2011.001000001
....................................................................................................................................................................................................................................TTCGAA--------------------A----A--------ACATTGCG-------GCAC---------------CA---------A..........................................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................................................ATTTTCGAA--------------------A----A--------ACATTGCG-------GCAC---------------......................................................................................................................................................................................................................................2311.001010000
ATTA--GGA--------------------------------------------------------------------TTTTGCATCGCAGCGATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
.................................................................................GCATCGCAGCGATCGCAGCTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....................................................................................................CGCAGATCATATCAC------AGA----A---T..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................CGCAGATCATATCAC------AGA----A---G..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................................................................................CATCGAAC-TTGAGG-G----AAA-----------TC........................................................................................................................................................................................................................................................................................................................2011.001001000
..............................................................................TTTGCATCGCAGCGATCGCAGCTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................GTGT--ATAAGAGA--------------------------GCGTCAAAGA.................................................................................................2211.001010000
......................................................................................................................................................................................................................................CGAA--------------------A----A--------ACATTGCG-------GCAC---------------CA---------AATC.......................................................................................................................................................................................................................2411.001010000
..TA--GGA--------------------------------------------------------------------TTTTGCATCGCAGCGATCGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................CATCGCAGCGATCGCAGCTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............................................................................................................................................................................................................................................................................................CAC---------------CA---------AATCGATTT-GAATAGA-------T..................................................................................................................................................................................................2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAGAAGAA--------------------------------CCCCAATT-G.................2111.001010000
................................................................................................................................................AATT-------------------------------ATAGCATCGAAC-TTGAGG-G----A.......................................................................................................................................................................................................................................................................................................................................2411.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................GT----GTGT--ATAAGAGA--------------------------GCGTCAAAG..................................................................................................2311.001000001
............................................................................................................................................................................................................................................................................................................................................................................AACAGGGAATACTTTGT----GTGT--ATA..........................................................................................................................................2411.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................GT--ATAAGAGA--------------------------GCGTCAAAGAA---.............................................................................................2111.001000010
...................................................................................................................................................................................................................................................................................................................................................GA--AAATCGTGTG---A--CAC-TAACAGGGAAT..............................................................................................................................................................2711.001000010
..........................................................................................................................................ATTTTAAATT-------------------------------ATAGCATCGAAC-TTGAGG-.............................................................................................................................................................................................................................................................................................................................................2811.001000010
.........................................................................................................................................................................................................................................................................................................................................................ATCGTGTG---A--CAC-TAACAGGGA................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................ACAGGGAATACTTTGT----GTGT--ATAAG........................................................................................................................................2511.001000001
.....................................................................................................................................................................................AGCATCGAAC-TTGAGG-G----AA......................................................................................................................................................................................................................................................................................................................................1911.001000010
...........................................................................................................................................................................................GAAC-TTGAGG-G----AAA-----------TCGTAA....................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
CAAA--AGATC----------------------------------------------------------------------------------TAG-------CAGATCATATCAC------AGA----AA-GGATAAACATTAAATT-------------------------------CTAGCATCGAAC-TTGA--AG----AAGAAGCTACTTGATTGTAACATTTTCTAC-------------------------A--------CC-----------CCACCC---------------CG------GG-AATCATTTT-GATTAGA-------T-----------TGTG---A--CACTTAACAGGGAATACTACTATTGTGTGTGTGTT----------------------T--------ACGTCAAAGAA---AAC--AA-AT-CAATTTTCTTTGTGATAGAAGAAA-----AAAT----------------------CCAAAATT-GTACTTAA------TTAASizeHit CountTotal NormTotal
No Reads
dp5
GAGA--AGGAGAGGG----A------G-AGAGAGAGAGAGAGAGCGGAAGCAGCAAAATCTACACCCCCTTACATTTTTTAGCATCGCAGC-ATCG-------T-CTTCATATCAT------CGCTGAAAA-GGAAATCTTATTA-TT-------------------------------GTAACATCGAAAACTGAAAAAAAAAACG-----------TTGTTAAAT--CCGAG-------------------------A--------GATAAACTGAA-----------------------------------------------------------------------------A---AACTAACAGGGATTTAA--------------------------------------------------TTCACGGAA---ATT--TTCATACCATTTTCTTTGTGATAGAAGAAAAAAA-AAAT----------------------CTACAATTTGTACTTAA------ATTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................TAAACTGAA-----------------------------------------------------------------------------A---AACTAACAGGGATT..............................................................................................................................................................2413.0030000000300
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTTTCTTTGTGATAGAAG.............................................................2111.0010001000000
.....................................................................................................................................................................................................AAAAAAAACG-----------TTGTTAAAT--C..............................................................................................................................................................................................................................................................................................................2011.0010010000000
...............................................................................TAGCATCGCAGC-ATCG-------T-CTTCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCATTTTCTTTGTGATAGAA..............................................................2311.0010010000000
..............................................................CACCCCCTTACATTTTTTAGCATCGCAGC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..............................................................................TTAGCATCGCAGC-ATCG-------T-CTTCATAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
................................................AGCAGCAAAATCTACACCCCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
............................................................................................ATCG-------T-CTTCATATCAT------CGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------------TTCACGGAA---ATT--TTCATACC................................................................................2211.0010100000000
.....................................................................TTACATTTTTTAGCATCGCAGC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
.....................................GAGAGAGCGGAAGCAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................AAT--CCGAG-------------------------A--------GATAAACTGAA-----------------------------------------------------------------------------A---AACT........................................................................................................................................................................2511.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................AACTAACAGGGATTTAA--------------------------------------------------TTCACGG..................................................................................................2411.0010000100000
...............................................................................................G-------T-CTTCATATCAT------CGCTGAAAA-GGAA............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTTGTGATAGAAGAAAAA........................................................2211.0010000010000
............................................................................................................CATATCAT------CGCTGAAAA-GGAAATCTT.......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................ACTAACAGGGATTTAA--------------------------------------------------TTCACGG..................................................................................................2311.0010000100000
..............................................................................................................................GAAAA-GGAAATCTTATTA-TT-------------------------------GTAAC............................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
..................................................................................CATCGCAGC-ATCG-------T-CTTCATATC..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.............................................................................................................................................................................................................................TTAAAT--CCGAG-------------------------A--------GATAAAC.................................................................................................................................................................................................................................................................1911.0010010000000
......................................................................................................................................................................................................................................CGAG-------------------------A--------GATAAACTGAA-----------------------------------------------------------------------------A---AACT........................................................................................................................................................................2111.0010100000000
.........................................................................................................CTTCATATCAT------CGCTGAAAA-GGAA............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................ACAGGGATTTAA--------------------------------------------------TTCACGGAA---ATT--........................................................................................2411.0010010000000
............................................................................................................................................TATTA-TT-------------------------------GTAACATCGAAAACTGAAAA.............................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..............................................................................................................TATCAT------CGCTGAAAA-GGA.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000000
...................................................................................ATCGCAGC-ATCG-------T-CTTCATATCAT------..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
..........................................................................TTTTTTAGCATCGCAGC-ATCG-------T-CTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
.AGA--AGGAGAGGG----A------G-AGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.4020100100000
GAGA--AGGAGAGGG----A------G-AGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000100000
..GA--AGGAGAGGG----A------G-AGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100000000
..........GAGGG----A------G-AGAGAGAGAGAGAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.0710100000000
...............................GAGAGAGAGAGAGCGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000100000
droPer2
GAGA--AGGAGAGGG----A------G-AGAGA----GAGAGAGCGGAAGCAGCAAAATCTACACCCCCTTACATTTTTTAGCATCGCAGC-ATCG-------T-CTTCATATCAT------CGCTGAAAA-GGAAATCTTATTA-TT-------------------------------GTAACATCGAAAACTGAAAAA---CACG-----------TTGTTAAAT--CCGAG-------------------------A--------GATAAACTGAA-----------------------------------------------------------------------------A---AACTAACAGGGATTTAA--------------------------------------------------TTCACGGAA---ATT--TTCATACCATTTTCTTTGTGATAGAAGAAAAAAA-AAAT----------------------CTACAATTCGTACTTAAATTAATTTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................ATTA-TT-------------------------------GTAACATCGAAAACTGA................................................................................................................................................................................................................................................................................................................................................2316.006600000
................................................................................................................................................A-TT-------------------------------GTAACATCGAAAACTGA................................................................................................................................................................................................................................................................................................................................................2015.005500000
....................................................................CTTACATTTTTTAGCATCGCAGC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005500000
...............................................................................................G-------T-CTTCATATCAT------CGCTGAAAA-G...............................................................................................................................................................................................................................................................................................................................................................................................................2314.004310000
..............................................................................................................................................................................................................G-----------TTGTTAAAT--CCGAG-------------------------A--------GATA....................................................................................................................................................................................................................................................................2011.001000001
..........................................................................................C-ATCG-------T-CTTCATATCAT------CGCTGG....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
GAGA--AGGAGAGGG----A------G-AGAGA----GAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................................................................................................CTTCATATCAT------CGCTGAAAA-GGA.............................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................CGCAGC-ATCG-------T-CTTCATATCAT------CGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...............................................................................................G-------T-CTTCATATCAT------CGCTGAAAA-GGA.............................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..........................................................................................C-ATCG-------T-CTTCATATCAT------CGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................ATTA-TT-------------------------------GTAACATCGAAAACTGC................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................C-ATCG-------T-CTTCATATCAT------C.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACCATTTTCTTTGTGA...................................................................1911.001001000
............................................................................................................CATATCAT------CGCTGAAAA-G...............................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..............................................................................................CG-------T-CTTCATATCAT------CGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
GAGA--AGGAGAGGG----A------G-AGAGA----GA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
............................................................................................................................................................................................................................................................................GATAAACTGAA-----------------------------------------------------------------------------A---AACTAACAGGGAT...............................................................................................................................................................2511.001100000
................................................................................................................................................A-TT-------------------------------GTAACATCGAAAACTGG................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................G-------T-CTTCATATCAT------CGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................GAAAAA---CACG-----------TTGTTAAAT--C..............................................................................................................................................................................................................................................................................................................2011.001001000
........................................................................................................................................ATCTTATTA-TT-------------------------------GTAACATCGAAAACTGG................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................................................GC-ATCG-------T-CTTCATATCAT------CGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......................................................................................................................................................................................................AA---CACG-----------TTGTTAAAT--CCGAG-------------------------A--------GATAAA..................................................................................................................................................................................................................................................................2711.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATT--TTCATACCATTTTCTTTGT.....................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................GGATTTAA--------------------------------------------------TTCACGGAA---A............................................................................................1811.001010000
...A--AGGAGAGGG----A------G-AGAGA----GAGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501000001
.AGA--AGGAGAGGG----A------G-AGAGA----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251001000
.......GGAGAGGG----A------G-AGAGA----GAGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
droWil2
AAAA--AAAATAC----------AAT-----------------------------------------------A-A-CAATTTCTTTTGGTGAACG-------CAGTTCATATCAAAATTATATTTAA-AA--AACAAAATTAAAATT-A--------------------TTTTTAAATTTAGCAACGAAA-------------AAA-----------TTGTAAA------GAA-------------------ACAA--C---AAAAGAGAAAACAAAA---AAACCCATTTTTGTAAATCATA---------AATCATTTT-----AAA-------TTAA-AACTAAGTGAG---A--GAC---ACAGGGATATATTATTTTGTTTGT--TTT----------------------T------GAATGTCAAGGAT---AAT--AC-AT-TGAGTTTCCTTGTGATAAAGAGTTT-A--AGAC----------------------GCAAAATT-GTTTGTAC------TTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAAGAGTTT-A--AGAC----------------------GCA........................2212.00200110
............................................................................................................................................................................................AAA-------------AAA-----------TTGTAAA------GAA-------------------ACAA--C---A............................................................................................................................................................................................................................................................................2211.00101000
...........................................................................................................................................................................................................................................................................................................................................................AGTGAG---A--GAC---ACAGGGATATATTAT........................................................................................................................................................2511.00101000
..................................................................................................................................................................................................................................................................................................................................................................................GATATATTATTTTGTTTGT--TTT----------------------T------GAAT.........................................................................................................2711.00101000
............................................................................................................................................................................................................................................................................................................................................................GTGAG---A--GAC---ACAGGGATATATTAT........................................................................................................................................................2411.00100010
.......................................................................................................................................................................................................................................................................................................................................................ACTAAGTGAG---A--GAC---ACAGGG.................................................................................................................................................................2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAAGAGTTT-A--AGAC----------------------GCAAA......................2411.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--AC-AT-TGAGTTTCCTTGTGATAAAGA.............................................................2711.00100100
.............................................................................................................................................................................................................................................................................................................................ATTTT-----AAA-------TTAA-AACTAAGTGAG---A--GAC---A......................................................................................................................................................................2811.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--AC-AT-TGAGTTTCCTTGT.....................................................................2011.00101000
.......................................................................................................................................................................................................................................................................................................................................................................GAC---ACAGGGATATATTATTTTGT...................................................................................................................................................2311.00100010
.........................................................................................................................................................................................................................................................................................................................................................TAAGTGAG---A--GAC---ACAGGG.................................................................................................................................................................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAAGAGTTT-A--AGAC----------------------G..........................2011.00100010
.................................................................................................................................................................................ATTTAGCAACGAAA-------------AAA-----------TT........................................................................................................................................................................................................................................................................................................................1911.00100010
...................................................................................................................................................................................................................................................................................................................................................AA-AACTAAGTGAG---A--GAC---ACAGGGA................................................................................................................................................................2411.00100100
..................................................................................................................................................................................................................................................................................................................................................TAA-AACTAAGTGAG---A--GAC---ACAGGG.................................................................................................................................................................2411.00100100
...................................................................................................................................................T-A--------------------TTTTTAAATTTAGCAACGAA......................................................................................................................................................................................................................................................................................................................................................2211.00100100
..............................................................................................................................................................................................................................................................................................................................................................GAG---A--GAC---ACAGGGATATATTATTTTGTT..................................................................................................................................................2811.00100100
.......................................................................................................................................................................................................................................................................AAAAGAGAAAACAAAA---AAACCCA...................................................................................................................................................................................................................................................2311.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCCTTGTGATAAAG..............................................................1811.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAAGAGTTT-A--AGAC----------------------GCAAAATT-..................2711.00100010
...................................................................................................................................................................................................................................................................................................................................................AA-AACTAAGTGAG---A--GAC---ACAGGG.................................................................................................................................................................2311.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAGAGTTT-A--AGAC----------------------GCA........................2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................GAC---ACAGGGATATATTATTTTGTT..................................................................................................................................................2411.00100100
......................................................................................................................................................................................................................................................................................................................................................AACTAAGTGAG---A--GAC---ACAGGGA................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................................................................................................AAGAGAAAACAAAA---AAACCCA...................................................................................................................................................................................................................................................2111.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-A--AGAC----------------------GCAAAATT-GTTTG.............2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGTCAAGGAT---AAT--AC-AT-..................................................................................2011.00100010
..........................................................................................................................................................................................................................................................................AGAGAAAACAAAA---AAACCCATT.................................................................................................................................................................................................................................................2211.00100010
..............................................................................AATTTCTTTTGGTGAACG-------C............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT---AAT--AC-AT-TGAGTTTCCTT.......................................................................2111.00100010
......................................................................................................................................................................................................................................................................................................................................................AACTAAGTGAG---A--GAC---ACAGG..................................................................................................................................................................2011.00100010
.........ATAC----------AAT-----------------------------------------------A-A-CAATTTCTTTTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................GT--TTT----------------------T------GAATGTCAAGGAT---AAT--AC-AT-T.................................................................................2711.00101000
..................................................................................................................................................................................................................................................................................................................................................................................GATATATTATTTTGTTTGT--.............................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................T------GAATGTCAAGGAT---AAT--AC-AT-T.................................................................................2211.00100010
............................................................................................................................................................................................................................................................................................................................................................GTGAG---A--GAC---ACAGGGATA..............................................................................................................................................................1811.00100001
....................................................................................................................................................................................................................................................................................................................................................A-AACTAAGTGAG---A--GAC---ACAGGG.................................................................................................................................................................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................GAG---A--GAC---ACAGGGATATATTATTTT.....................................................................................................................................................2511.00100001
.................................................................................................................................................................................................................................................................................................................................................TTAA-AACTAAGTGAG---A--GAC---ACA....................................................................................................................................................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGAGTTTCCTTGTGATAAAG..............................................................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-A--AGAC----------------------GCAAAATT-GTTTGTA...........2211.00100100
....................................................................................................................................................................................................................................................................................................................................................A-AACTAAGTGAG---A--GAC---AC.....................................................................................................................................................................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................GT--TTT----------------------T------GAATGTCAAGGAT---A............................................................................................2011.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAAGAGTTT-A--AGAC----------------------GCAAAAT....................2611.00100100
...........................................................................................................................................................................................................................TGTAAA------GAA-------------------ACAA--C---AAAAGA.......................................................................................................................................................................................................................................................................2011.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---AAT--AC-AT-TGAGTTTCCTTGT.....................................................................2211.00100010
droVir3
AAGT--ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GAGTTCATATCAC------GAG----GA--GACACATTTAAAATT-AGGTTGCCGCAACGAAAA-----------------------GTT-TGGAAA----CAA-----------CAATAAAGTAATTGGC-------------------------G--------A-GGAGCAGCAGCTGCACT---------------CGAAATAAATA-AGTTTTTG-GGATAGA-------TTCG-CGTTAGTTGCG---A--TA-TTAACAGGGAATTTTTA--AAATA--------GCCG-------------TCTTTTGGGTT---GAGACACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACTTAA------TTA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..GT--ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2416.006000100000000000001000000000000000000000000000000000000000003010
.........................................................................................................................................................TGCCGCAACGAAAA-----------------------GTT-TGGA..............................................................................................................................................................................................................................................................................................................................................2113.003000000000000000000100000000000000000000000000000000000000001010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACTT............2513.003010100000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................AGCAGCTGCACT---------------CGAAATAA..............................................................................................................................................................................................................................2012.002000000000000001000100000000000000000000000000000000000000000000
...T--ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000100000000000000000000000000000000000000000000000000000000010
........ACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000100000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................TGGC-------------------------G--------A-GGAGCAGCAGCTGCACT---------------......................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AAT--TG----------------------A--AGA------ACT----------------------CCAAAAT....................2112.002002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-..................2112.002000000000000001001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................ATAAAGTAATTGGC-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000001010
....................................................................................................................................................................................................................................ATTGGC-------------------------G--------A-GGAGCAGCAGCT..........................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000020
..........A----------------------------------------------------------------------ACTTCTGGCTGAACG-------GAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000101000000000000000000000000000000000000000000000
......ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000100000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AGA------ACT----------------------CCAAAATT-GTACT.............2012.002020000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AGTAATTGGC-------------------------G--------A-GGAGCAGCAGCT..........................................................................................................................................................................................................................................................2412.002001000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------A--AGA------ACT----------------------CCAAAATT-GTACT.............2112.002000100000000000000000000000000000001000000000000000000000000000
......ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................CG-------------TCTTTTGGGTT---GAGACACAGAAA--.............................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAATT-AGGTTGCCGCAACG.................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................AA-----------------------GTT-TGGAAA----CAA-----------CAATAA....................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GACACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------...........................2211.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................G---A--TA-TTAACAGGGAATTTTT..........................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................G-GGATAGA-------TTCG-CGTTAGTTGCG---................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TTTTG-GGATAGA-------TTCG-CGT...........................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................ATTGGC-------------------------G--------A-GGAGCAGCAGCTGCACT---------------CG....................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTTTA--AAATA--------GCCG-------------TCTT.....................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACT.............2211.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AATA-AGTTTTTG-GGATAGA-------TTC................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
......ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GAGTTCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ATAGA-------TTCG-CGTTAGTTGCG---A--T............................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................A-AGTTTTTG-GGATAGA-------TTCG-CGTTAGT.......................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AGGTTGCCGCAACGAAAA-----------------------GT....................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAGTAATTGGC-------------------------G--------A-GGAGCAGCAGCTG.........................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................T-AGGTTGCCGCAACGAAAA-----------------------G.....................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------...........................1911.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGGGAATTTTTA--AAATA--------GCCG-------------TCT......................................................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................TTTAAAATT-AGGTTGCCGCAAC..................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................TGCCGCAACGAAAA-----------------------GTT-T.................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTTGCG---A--TA-TTAACAGGGA................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTGCG---A--TA-TTAACAGGGAATT.............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................T-AGGTTGCCGCAACGAAAA-----------------------GTT-TGGAC.............................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CT---------------CGAAATAAATA-AGTTTTTG-GGAT.............................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................ATAAAGTAATTGGC-------------------------G--------A-GGAGCAGC..............................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................AA-----------CAATAAAGTAATTGGC-------------------------G--------A-GGAGCA................................................................................................................................................................................................................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GACACAGAAA--AAT--TG----------------------A--AGA------....................................................1911.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................AATT-AGGTTGCCGCAACGAAA..............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
AAGT--ATACA----------------------------------------------------------------------ACTTCTGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................TGGCTGAACG-------GAGTTCATATCAC------G.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................ATTGGC-------------------------G--------A-GGAGCAGCAGCTGC........................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................CAA-----------CAATAAAGTAATTGGC-------------------------G--------A-GGA...................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA--AAT--TG----------------------A--AGA------ACT----------------------CCAAA......................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TTTAAAATT-AGGTTGCCGCAACG.................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................ACTTCTGGCTGAACG-------GAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TGCG---A--TA-TTAACAGGGAATTTTTA--AA.....................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................GAAAA-----------------------GTT-TGGAAA----CAA-----------CAAT......................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................GGCTGAACG-------GAGTTCATATCAC------GAG----GA--...............................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GACACATTTAAAATT-AGGT...........................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................CACATTTAAAATT-AGGTTGCCGCAAC..................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TT-AGGTTGCCGCAACGAAAA-----------------------GTT-..................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................CGAAAA-----------------------GTT-TGGAAA----CAA-----------CAAT......................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.AGT--ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................TTCTGGCTGAACG-------GAGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTAC..............2411.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------CCAAAAT....................2711.001000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTT---GAGACACAGAAA--A............................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------CCAAAAT....................2811.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................GTTGCCGCAACGAAAA-----------------------GTT-TGGA..............................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTG-GGATAGA-------TTCG-CGTTAGTTGCG---................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AATA--------GCCG-------------TCTTTTGGGTT---GAGACAC....................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................G-------GAGTTCATATCAC------GAG----GA--GACACA.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
......ATACA----------------------------------------------------------------------ACTTCTGGCTGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CGAAATAAATA-AGTTTTTG-GG...............................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTA...............2411.001000000000000001000000000000000000000000000000000000000000000000
..........A----------------------------------------------------------------------ACTTCTGGCTGAACG-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA--AAT--TG----------------------A--AGA------ACT----------------------CCA........................2011.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................ATTGGC-------------------------G--------A-GGAGCAGCAGC...........................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................A-AGTTTTTG-GGATAGA-------TT.................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................ATA--------GCCG-------------TCTTTTGGGTT---GA.........................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................GCAACGAAAA-----------------------GTT-TGGAAA----C.......................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................G-------------TCTTTTGGGTT---GAGACACA...................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------CCAAA......................2411.001000000000000000000100000000000000000000000000000000000000000000
......ATACA----------------------------------------------------------------------ACTTCTGGCTGAACG-------GAGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................ATT-AGGTTGCCGCAACGAAA..............................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................G-------------TCTTTTGGGTT---GAGACA.....................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TT---GAGACACAGAAA--AAT--TG----------------------A--A............................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AAATA--------GCCG-------------TCTTTTGGGTT---GA.........................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCCG-------------TCTTTTGGGTT---GAGACACAGA.................................................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AATA--------GCCG-------------TCTTTTGGGTT---GA.........................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACTT............2811.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AA-----------------------GTT-TGGAAA----CAA-----------CAATA.....................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CG-CGTTAGTTGCG---A--TA-TTAACAGGG.................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................GTTCATATCAC------GAG----GA--GACACATT.......................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AATA--------GCCG-------------TCTTTTGGGTT---...........................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................................A--AAATA--------GCCG-------------TCTTTTGGGTT---GAG........................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATAAATA-AGTTTTTG-GGATAGA-------...................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................A--AAATA--------GCCG-------------TCTTTTGGGTT---GAGAC......................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................GAAAA-----------------------GTT-TGGAAA----CAA-----------CAA.......................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................T---GAGACACAGAAA--AAT--TG----------------------A--AGA------ACT----------------------...........................2511.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................GCAACGAAAA-----------------------GTT-TGGAAA----CAA-----------C.........................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................GGCTGAACG-------GAGTTCATATCAC------G.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTA...............2311.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------A--AGA------ACT----------------------CCAAAATT-GTACTTAA------T...2511.001010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACT.............2611.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACTTA...........2611.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AATT-AGGTTGCCGCAACGAAAA-----------------------G.....................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GAATTTTTA--AAATA--------GCCG-------------TCTTTTGGGTC---...........................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................T---GAGACACAGAAA--AAT--TG----------------------A--AGA------A...................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................ATCAC------GAG----GA--GACACATTTAAAATT-...............................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------------A--AGA------ACT----------------------CCAAAATT-GTACTTAA------TT..2711.001000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................T---GAGACACAGAAA--AAT--TG----------------------A--AGA------....................................................2211.001000000000001000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TAAATA-AGTTTTTG-GGATAGA-------AAA................................................................................................................................................................................................2440.251000000000000000010000000000000000000000000000000000000000000000
droMoj3
ATTA--GGAGCAG-TCCCGAGCGAAA-----------------------------------------------G-TTTTTAACGTCTGGGTGAACT-------GAGTTCATATCAC------AAA----GA-AATCACATTTAACCGT-AGGGTGCCACAACGAAAAGTGTTTGG-------------------AAACAA----GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGCAGCAACTGCGCC---------------TGAAATAAATT---TAA-TT-CGATAGATTCGCCGATAG--ATTCGATATAGCGA---AATTCACAGGGATTTTTACTAG-------------ACG-------------------GGGTT---GAGGCACAGCAAAAAATACT---T-ATATATTTTTTGTGATAACCGTTTTGAAGATAT----------------------CCAAAATTTGTACTTAA------TT--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................A-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................2213.003100002
............................................................................................................................................................................................................GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GG....................................................................................................................................................................................................................................................................2112.002100001
.......................................................................................................................................................................................................................................................................................................................................................................................TTACTAG-------------ACG-------------------GGGTT---GAGGC......................................................................................................2012.002000002
......................................................................................................................................................................................................AA----GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................2612.002000002
................................................................................................................................................................................................................................................................................AGCAGCAACTGCGCC---------------TGAAAT................................................................................................................................................................................................................................2112.002200000
............................................................................................................................................................................................................GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................2412.002000002
..........................................................................................................................................................................................................................................................................................................................................................CGATATAGCGA---AATTCACAGGGAT...............................................................................................................................................................2412.002200000
......................................................................................................................................................................................................AA----GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GG....................................................................................................................................................................................................................................................................2312.002200000
............................................................................................................................................................................................................GAA-----------TTGTAACCATT--GAA-------------------------G--------A-......................................................................................................................................................................................................................................................................1912.002000002
............................................................................................................................................................................................................................................................................................................................................................ATATAGCGA---AATTCACAGGGATTT.............................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................AGCGA---AATTCACAGGGATT..............................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................CGCCGATAG--ATTCGATATAGCGA---AA..........................................................................................................................................................................2511.001010000
............................................................................TTTTAACGTCTGGGTGAACT-------GAGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................TTTTACTAG-------------ACG-------------------GGGTT---GAG........................................................................................................2011.001100000
...................................................................................................................................................................................................AACAA----GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GG....................................................................................................................................................................................................................................................................2611.001000001
.............................................................................................................................................................................GG-------------------AAACAA----GAA-----------TTGTAACC..................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................GTGTTTGG-------------------AAACAA----GAA-----------TT........................................................................................................................................................................................................................................................................................................................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................GCCGATAG--ATTCGATATAGCGA---............................................................................................................................................................................2211.001000001
..............................................................................................................................................................................................................A-----------TTGTAACCATT--GAA-------------------------G--------A-GG....................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................TACTAG-------------ACG-------------------GGGTT---GAGGCACAGCAAA..............................................................................................2711.001100000
.......................................................................................................................................................................................................A----GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GG....................................................................................................................................................................................................................................................................2211.001000001
....................................................................................................................................AATCACATTTAACCGT-AGGGTGCC.......................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................TAG-------------ACG-------------------GGGTT---GAGGCACAGC.................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................TTTTACTAG-------------ACG-------------------GGGTT---GAGG.......................................................................................................2111.001100000
..........................................................................................................................................ATTTAACCGT-AGGGTGCCACAA...................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........GCAG-TCCCGAGCGAAA-----------------------------------------------G-TTTTTAACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................TT--GAA-------------------------G--------A-GGAGCAGCAACTGCGCC---------------TGA...................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................................TGTAACCATT--GAA-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACT---T-ATATATTTTTTGTGATAACCGTT...........................................................2811.001100000
...............................................................................TAACGTCTGGGTGAACT-------GAGTTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.......................................................................................................................................................................................................................................................................................................................................AGATTCGCCGATAG--ATTCGATATAG..................................................................................................................................................................................2511.001100000
.............................................................................................................ATATCAC------AAA----GA-AATCACATTTAACCGT-...............................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................................................................TTTAACGTCTGGGTGAACT-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................GATATAGCGA---AATTCACAGGG.................................................................................................................................................................2111.001000001
............................................................................................................................................................................................................................GTAACCATT--GAA-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................ATAGCGA---AATTCACAGGGATT..............................................................................................................................................................2111.001000001
.............................................................................................................................................TAACCGT-AGGGTGCCACAACGAAA..............................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................GAAA-----------------------------------------------G-TTTTTAACGTCTGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................CG-------------------GGGTT---GAGGCACAGCAAAA.............................................................................................2111.001000001
.......................................................................................................GAGTTCATATCAC------AAA----GA-A...............................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................GTTTGG-------------------AAACAA----GAA-----------TTGTAACC..................................................................................................................................................................................................................................................................................................................2311.001100000
.........................A-----------------------------------------------G-TTTTTAACGTCTGGGTGAACT-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................AA-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................................................................................................TTTACTAG-------------ACG-------------------GGGTT---GAGGCACAGC.................................................................................................2611.001000001
.................................................................................................................................................................................................................................................................................GCAGCAACTGCGCC---------------TGAAAT................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................ACCGT-AGGGTGCCACAACGAA...............................................................................................................................................................................................................................................................................................................................................................................2111.001000001
......................................................................................................................................................................................................................................................................................................................................................................................TTTACTAG-------------ACG-------------------GGGTT---GAGG.......................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................TTTTACTAG-------------ACG-------------------GGGTT---GAGGC......................................................................................................2211.001100000
......................................................................................TGGGTGAACT-------GAGTTCATATCAC------A.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................................................A-----------TTGTAACCATT--GAA-------------------------G--------A-GGA...................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTTTTGTGATAACC..............................................................2011.001100000
................................................................................................................................................................................................................................................................................AGCAGCAACTGCGCC---------------TGAA..................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................ATCACATTTAACCGT-AGGGTG.........................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................TTTAACGTCTGGGTGAACT-------GAGTTCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...........................................................................................GAACT-------GAGTTCATATCAC------AAA----GA-AAT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................................................AGCAACTGCGCC---------------TGAAATAA..............................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................AGATTCGCCGATAG--ATTCG........................................................................................................................................................................................1911.001100000
......................................................................................................................................TCACATTTAACCGT-AGGGTGCCAC.....................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAACCGTTTTGAAGAT...................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................CGATAGATTCGCCGATAG--.............................................................................................................................................................................................1811.001100000
............................................................................................................................................................................................................................................................................................GCC---------------TGAAATAAATT---TAA-TT-CGAT.............................................................................................................................................................................................................2311.001100000
.........................................................................G-TTTTTAACGTCTGGGTGAACT-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................................................................................................................................................................................................................................................GCAGCAACTGCGCC---------------TGAAATAAAT............................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................................................................................................................................................T-CGATAGATTCGCCGATAG--ATT..........................................................................................................................................................................................2211.001100000
..................................................................................................................................................................GAAAAGTGTTTGG-------------------AAACAA----GA......................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................A-TT-CGATAGATTCGCCGATAG--ATTC.........................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAT----------------------CCAAAATTTGTACTT............2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................TTTACTAG-------------ACG-------------------GGGTT---GAGGC......................................................................................................2111.001000001
.............................................................................................ACT-------GAGTTCATATCAC------AAA----GA-AATCAC..........................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................TCACATTTAACCGT-AGGGTGCCACAAC..................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGTGATAACCGTTTTGAAGATA..................................................2811.001000010
............................................................................TTTTAACGTCTGGGTGAACT-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACT---T-ATATATTTTTTGTGATAACC..............................................................2611.001000010
.......................................................................................................................................................................................................A----GAA-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGC.................................................................................................................................................................................................................................................................2511.001000001
.............................................................................................................................................................................................................AA-----------TTGTAACCATT--GAA-------------------------G--------A-GGAGCAGCA.............................................................................................................................................................................................................................................................2711.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................G-------------ACG-------------------GGGTT---GAGGCACAGCAAAA.............................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAACCGTTTTGA.......................................................1911.001000001
.............................................................................................................................................TAACCGT-AGGGTGCCACAAC..................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
AAATCACGAGGAG-TCAGGAGCTAAAGCAAAAA----------------------------------------A-AGAGAAAGGTCTGGATGAACG-------GAGTTCATATCAC------GAA----AG-GAATACATTCAACGTATTGGAAG-------------------------CAACAACGAAA-------CA----GTG-----------TTGAAAAACA-TCAAAACCAGCTAATTGTAATTAGAGAGAGAGAGGAGAGGAGAAACACCAACTGCACT---------------CGAAATAATTA---AAA-AT-TGATAGA-------TT--------------------CGCGTAACAGGGATTTTTTTTGATATA--------GGCGACGGTCTTCTACTTCTTTGGGGCTAAGAAGACGCAGAA---AAT--TC-GT-AAATTTCG--TGTGATAAGAATTAGGA-----GGGAAAAATACCCAACAACAACAACAAAATT-GTACTTAA------TTATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................CGCGTAACAGGGATTTTTTTTG.......................................................................................................................................................2211.00110
..................................................................................................................................................................................................................................................................GAGAGGAGAGGAGAAACACCAACTGCA.......................................................................................................................................................................................................................................................2711.00110
........................................................................................................................................................................................................................................................................................................................................................................................TTTTGATATA--------GGCGACGGTCTTC.............................................................................................................................2311.00110
..............................................................................GAAAGGTCTGGATGAACG-------GAGTTCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
..................................................................................................................................G-GAATACATTCAACGTATTGGAA..........................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.........................................................................A-AGAGAAAGGTCTGGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.......GAGGAG-TCAGGAGCTAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
............................................................................GAGAAAGGTCTGGATGAACG-------GAGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
..........................................................................................................................................................G-------------------------CAACAACGAAA-------CA----GTG-----------TTGAAAAACA-TC.............................................................................................................................................................................................................................................................................................................2911.00110
....................................................................................TCTGGATGAACG-------GAGTTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.................................................................................................................................................................................................................................................................................ACACCAACTGCACT---------------CGAAA.................................................................................................................................................................................................................................1911.00110
............................................................................................................................................TCAACGTATTGGAAG-------------------------CAACAACGAAA-------..............................................................................................................................................................................................................................................................................................................................................2611.00110
..ATCACGAGGAG-TCAGGAGCTAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
....................................................................................................................................................................................................................................................................................................................................GATAGA-------TT--------------------CGCGTAACAGGGATTTTT...........................................................................................................................................................2611.00101

Generated: 05/18/2015 at 11:20 PM