ID:dsi_10539 |
Coordinate:2r:5339668-5339727 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
ATTGAAATGCCCAAGAAAGCAAAACAAAACAAATTAATTCGTAGAAAAAGGTGTGAGAAAATTAACTTGTCTTCCGTTGCCGGCAGCAAAAAAGCAAAATAATCAATTAGTTTCGCAGAATCGCTGCAGCCAAAAGAAGAACACAAATCGCTTTTACGGA
**************************************************................(((.((.(((....))).))))).....................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR902009 testis |
|---|---|---|---|---|---|---|---|---|
| ..............................................AAAGGTGTGAGAAAATTAACTTGTC......................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................................AGCCAGAAGAAGAACACAAATCGCT........ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ......................................................................................................................................AGAAGGACACAAAGCGCTTAT..... | 21 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .................................TTAATTCGTAGAAAAAGGTGT.......................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .......................................................................................................CAATTAGTTTCGCAGAA........................................ | 17 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................................................................CAATTAGTTTCGCAGA......................................... | 16 | 0 | 5 | 0.40 | 2 | 2 | 0 | 0 |
| ........................................................................................................AATTAGTTCCGCAGA......................................... | 15 | 1 | 15 | 0.07 | 1 | 1 | 0 | 0 |
| ........................................................................................................AATTAGGTTCGCAGA......................................... | 15 | 1 | 19 | 0.05 | 1 | 1 | 0 | 0 |
|
TAACTTTACGGGTTCTTTCGTTTTGTTTTGTTTAATTAAGCATCTTTTTCCACACTCTTTTAATTGAACAGAAGGCAACGGCCGTCGTTTTTTCGTTTTATTAGTTAATCAAAGCGTCTTAGCGACGTCGGTTTTCTTCTTGTGTTTAGCGAAAATGCCT
**************************************************................(((.((.(((....))).))))).....................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
M025 embryo |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................GCCACGTCGGTTTTCTT...................... | 17 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................CGACGTCGGTTTTCTTCTTGT................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................................................GTTAATCAAAGCGTCT......................................... | 16 | 0 | 5 | 0.40 | 2 | 2 | 0 | 0 | 0 | 0 |
| ................................................................................................ATTAACAGTTAATCAAAGCGTCT......................................... | 23 | 3 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 |
| .....TTAAGGTTCCTTTCGTTTTGTTT.................................................................................................................................... | 23 | 3 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................................TCGATTTTTCGTGTTACTAG........................................................ | 20 | 3 | 16 | 0.06 | 1 | 0 | 0 | 0 | 0 | 1 |
| ........................................................................................................TTAGTCATAGCGTCTTAAC..................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/23/2015 at 01:10 PM