ID:dsi_10525 |
Coordinate:3r:17169778-17169927 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
TATCAATGATTTCACGAACGCGCCACCAAAATTCACTCCTCAATTGAATTAAATGAATCGCATTTCGCCTACGTTTATCTGTGTGCGTGATTTCGCCTGTCTGTGTGTGTGTGTGTGCTGATGTATGCGGTGTAAATCAAATCAAATCGGTGCAGAACAAAAACTAATTTATATCAATTTATCCCGAAAAAAAACTACAGCCAGTGCAAGCAAAAAGCTAAATAAATTAAAACAATAAAGAACAAAAAAG
**************************************************....(((((((.....((.((((......)))).))))))))).....((..((...(((...(((((((((..((..(((....)))..))...)))))))))..)))...))..))................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................AAACAAATCGGTGAAGAAC............................................................................................ | 19 | 2 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| .........ATTCATGAACGCGCCAC................................................................................................................................................................................................................................ | 17 | 2 | 15 | 0.07 | 1 | 0 | 1 | 0 |
| ............................................................................ATCCGGGTGCGTGATT.............................................................................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 |
| ...........................................................................................TACGCCTGTCTGAGTG............................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 |
|
ATAGTTACTAAAGTGCTTGCGCGGTGGTTTTAAGTGAGGAGTTAACTTAATTTACTTAGCGTAAAGCGGATGCAAATAGACACACGCACTAAAGCGGACAGACACACACACACACACGACTACATACGCCACATTTAGTTTAGTTTAGCCACGTCTTGTTTTTGATTAAATATAGTTAAATAGGGCTTTTTTTTGATGTCGGTCACGTTCGTTTTTCGATTTATTTAATTTTGTTATTTCTTGTTTTTTC
**************************************************....(((((((.....((.((((......)))).))))))))).....((..((...(((...(((((((((..((..(((....)))..))...)))))))))..)))...))..))................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
M024 male body |
M023 head |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................TTTAGCTGCGTCTTGTTTTT....................................................................................... | 20 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................TTAGGGTAGTTTAGCAACGT................................................................................................ | 20 | 3 | 13 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................................................................................................................................TTAATTCTTGTTTTTTC | 17 | 1 | 15 | 0.07 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........AAAATGCTTGCGCTATGGT.............................................................................................................................................................................................................................. | 19 | 3 | 19 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............TGCTCGCGCGGCGGTTT............................................................................................................................................................................................................................ | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| AAAGTTGCTAAAGTGCATG....................................................................................................................................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...................................................................................................................................................................................................ATGTTGGTCAGGTTCGT...................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................AAGTCGGTCAGGTTCGT...................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
Generated: 04/23/2015 at 01:46 PM