ID:dsi_10520 |
Coordinate:3r:4184557-4184706 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -10.9 | -10.7 | -10.6 |
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intergenic
No Repeatable elements found
|
TGGCGGTGGCCCTGACCTGCGGATTTTGAAAGATTGAAATAGGAAGCCAGGTATACATACACAGCAACGAATGCAGCGTGTTCTATATTCTTAATTCGTAAGCCAAACCTATGTTTAAGACGTAGTTTATATAACCGTACGTATGTATGTAGCGAAACACGTTTTCAAACGTCGCATCGAAGCCATTTCTTCTGCAGCCATTGCAATTTCATCGTGTTGCGTAATCGCGAATTGTAAATGTGTCCCTACT
*****************************************************************************************************************...(((((((.((((...((..(((((....)))))))...)))))))))))...............********************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M025 embryo |
SRR618934 dsim w501 ovaries |
GSM343915 embryo |
M053 female body |
SRR553486 Makindu_3 day-old ovaries |
M023 head |
M024 male body |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
SRR902008 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR902009 testis |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................ATTGAAATAGGAAGCCAG........................................................................................................................................................................................................ | 18 | 0 | 1 | 6.00 | 6 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................................................................AATTTCATCGTGATG............................... | 15 | 1 | 12 | 4.08 | 49 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 8 | 36 | 0 | 3 | 0 |
| .............GACCTGCGGATTTTGAAAGATTG...................................................................................................................................................................................................................... | 23 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................TGAAAGATTGAAATAGGAAGCCAGT....................................................................................................................................................................................................... | 25 | 1 | 1 | 4.00 | 4 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................GTTTTCAAACGTCGCATCGA...................................................................... | 20 | 0 | 1 | 3.00 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................TTTAAGACGTAGTTTATATAACC.................................................................................................................. | 23 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................TTTCAAACGTCGCATCGA...................................................................... | 18 | 0 | 1 | 3.00 | 3 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TTTGAAAGATTGAAATAGGAAGCCAGT....................................................................................................................................................................................................... | 27 | 1 | 1 | 3.00 | 3 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................................................................ATTTCATCGTGTTGCGTAATCGC...................... | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................TTGAAATAGGAAGCCAG........................................................................................................................................................................................................ | 17 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................................GAAACACGTTTTCAAACGTCGCATC........................................................................ | 25 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................ATGTATGTAGCGAAACAC.......................................................................................... | 18 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......GGCCCTGACCTGCGGATTTTGA............................................................................................................................................................................................................................. | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................TTTTCAAACGTCGCATCGA...................................................................... | 19 | 0 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................ATTTTGAAAGATTGAAATAGGAAGC........................................................................................................................................................................................................... | 25 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TTTGAAAGATTGAAATAGGAAGCC.......................................................................................................................................................................................................... | 24 | 0 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................TTTTGAAAGATTGAAATAGGAAGCC.......................................................................................................................................................................................................... | 25 | 0 | 1 | 2.00 | 2 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........CCCTGACCTGCGGATTTTGAAA........................................................................................................................................................................................................................... | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................CGCGAATTGTAAATGTGTCCCTAC. | 24 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................TGCGGATTTTGAAAGATTGAAATAGG............................................................................................................................................................................................................... | 26 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................................................................CTTTGAAATTTCATCGTG.................................. | 18 | 2 | 6 | 1.33 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 6 | 0 | 0 | 0 |
| ..................................................................................................................TTAAGACGGAGATTATATAAA................................................................................................................... | 21 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................ATCGTGTTGCGTAATCGCGAA................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........CCTGACCTGCGGATTTTGAAAGATTGA..................................................................................................................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TTTGAAAGATTGAAATAGGA.............................................................................................................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................AGCAACGAATGCAGCGTGTTCT...................................................................................................................................................................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........CTGACCTGCGGATTTTGAAA........................................................................................................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................CGCGAAACACGTTTTCAAACG............................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................CGTTTTCAAACGTCGCATC........................................................................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................GTAAGCCAAACCTATGTTTAAGACGG............................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................TCTTAATTCGTAAGCCAAACCTATGTT....................................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................TTTTGAAAGATTGAAATAGGAAGCCAGT....................................................................................................................................................................................................... | 28 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................................AGCCATTTCTTCTGCAGCCA.................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................GTATGTAGCGAAACACGTTTTCAAACGTC............................................................................. | 29 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................TTTTGAAAGATTGAAATAGGAAGCCA......................................................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......TGGCCCTGACCTGCGGAC.................................................................................................................................................................................................................................. | 18 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................TTTTGAAAGATTGAAATAGGAAGC........................................................................................................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................................................................................CGCGAATTGTAAATGTGTCCC.... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................AAGATTGAAATAGGAAGCCAGGTA..................................................................................................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............TGACCTGCGGATTTTGAGAAATTGAAA................................................................................................................................................................................................................... | 27 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| TGGCGATGGCCCTGACCTGCGGAT.................................................................................................................................................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................................CAAACGTCGCATCGAAGC................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..GCGGTGGCCCTGACCTGCGGATT................................................................................................................................................................................................................................. | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................CATACACAGCAACGAATGC................................................................................................................................................................................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................................AAACGGCGCATCGGAGACATTTCT............................................................ | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......TGGCCCTGACCTGCGGATTTTGAAAGA......................................................................................................................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................................................CTTCTGCAGCCATTGCAATTTCATCGT................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................AATCGCGAATTGTAAATGTGTCC..... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................TATAACCGTACGTATGTATG..................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TTTGAAAGATTGAAATAGGAAGCCAG........................................................................................................................................................................................................ | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................GTAGCGAAACACGTGTTCA................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................CGGATTTTGAAAGATTGA..................................................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............TGACCTGCGGATTTTGAAAGATTGAAA................................................................................................................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................TGAAATAGGAAGCCAGT....................................................................................................................................................................................................... | 17 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................................................CATTTCTTCTGCAGCCATT................................................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................TAGTTTATATAACCGTACGTATGTATGT.................................................................................................... | 28 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................TTTCAAACGTCGCATCGG...................................................................... | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................ACGTATGTATGTAGCGAAAC............................................................................................ | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................TTTCAAACGTCGCATCGAAGC................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................TTTTGAAAGATTGAAATAGGAAGCCAG........................................................................................................................................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................TGCGGATTTTGAAAGATT....................................................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................................................................................GTAATCGCGAATTGTAAATG.......... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................ATGTAGCGAAACACGTTTT..................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................CTGCGGATTTTGAAAGAT........................................................................................................................................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................TGCGGATTTTGAAAGATTGAAATAGGA.............................................................................................................................................................................................................. | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......TGGCCCTGACCTGCGGATTTTG.............................................................................................................................................................................................................................. | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................................................................................................TGCGTAATCGCGAATTGTAAATGTGTCC..... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................AGCAACGAATGCAGCGTGTTCTAT.................................................................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............TGACCTGCGGATTTTGAAA........................................................................................................................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................AATTCGTAAGCCAAACCT............................................................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........CCCTGACCTGCGGATTTTGAA............................................................................................................................................................................................................................ | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TTTGAAAGATTGAAATAGG............................................................................................................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................................................................AATTTCATCGTGTTGCGTAATC........................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................TTGAAAGATTGAAATAGGAAGCC.......................................................................................................................................................................................................... | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................................................GCGTAATCGCGAATTGTAAATGTGTCCCC... | 29 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................GTAGTTTATATAACCGTACGTATGTG....................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............CCTGCGGATTTTGAAAGA......................................................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......GGCCCTGACCTGCGGATTTTG.............................................................................................................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................TTATATAACCGTACGTATGTATGT.................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................ACAGCAACTAATGCAGCGT........................................................................................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................ATGTAGCGAAACACGTTTTCAAAC................................................................................ | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............TGACCTGCGGATTTTGAAAGATTGA..................................................................................................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .GGCGGTGGCCCTGACCTGCGGATTT................................................................................................................................................................................................................................ | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................................................................................GTTGCGTAATCGCGAATTGTAAAT........... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................ATTCGTAAGCCAAACCTATG......................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................TTTCAAACGTCGCATCGAAGCC.................................................................. | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................TGCGGATTTTGAGAAATTGAAATAGGA.............................................................................................................................................................................................................. | 27 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................GCGGATTTTGAAAGATTG...................................................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................CACGTTTTCAAACGTCGT........................................................................... | 18 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................TTAAGACGTAGTTTATATA..................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................TTGAAAGATTGAAATAGGAAGCCAGT....................................................................................................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................CGTACGTATGAATGTAGCGCC.............................................................................................. | 21 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................AATAGGAAGCCAGGTATACATACACA........................................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................AGCCAAACCTATGTTTAAGA.................................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................GTTTAAGACGTAGTTTATA....................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................TTTAAGACGTAGTTTATA....................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................GTTCTATATTCTTAATTCGTAAGC................................................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................GAAATAGGAAGCCAGGTATAC.................................................................................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................TTGAAATAGGAAGCCAGG....................................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................TGAGAAATTGAAATAGGAAGCCAGT....................................................................................................................................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................CGGATTTTGAAAGATTGAAA................................................................................................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................GCGAATTGTAAATGTGTCCCTA.. | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................TTTTGAAAGATTGAAA................................................................................................................................................................................................................... | 16 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................AAGATTGTGATAGGACGCCAG........................................................................................................................................................................................................ | 21 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................................................TTGAAATTTCATCGTG.................................. | 16 | 1 | 5 | 0.40 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
| ................................ATTGAAATAGGAAGCCAGTTGG.................................................................................................................................................................................................... | 22 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................GAAATAGGAAGCCAGT....................................................................................................................................................................................................... | 16 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................................................................CTTTGAAATTTCATCGTGATG............................... | 21 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................................................TTGAAATTTCATCGTGATG............................... | 19 | 2 | 6 | 0.17 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................ATTTTGAAAGCTTGAGATC................................................................................................................................................................................................................. | 19 | 3 | 20 | 0.10 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................AAAGATTGAAACAGG............................................................................................................................................................................................................... | 15 | 1 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................AAGAGGTAGTTTATA....................................................................................................................... | 15 | 1 | 14 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................................TCGCGTTGCGTAATGGCAA.................... | 19 | 3 | 17 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
|
ACCGCCACCGGGACTGGACGCCTAAAACTTTCTAACTTTATCCTTCGGTCCATATGTATGTGTCGTTGCTTACGTCGCACAAGATATAAGAATTAAGCATTCGGTTTGGATACAAATTCTGCATCAAATATATTGGCATGCATACATACATCGCTTTGTGCAAAAGTTTGCAGCGTAGCTTCGGTAAAGAAGACGTCGGTAACGTTAAAGTAGCACAACGCATTAGCGCTTAACATTTACACAGGGATGA
**********************************************************************...(((((((.((((...((..(((((....)))))))...)))))))))))...............***************************************************************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR553485 Chicharo_3 day-old ovaries |
SRR902009 testis |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................GTCGGTAACGTTAAAGTAGCA................................... | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................GCCTAGGACTTTCTAACTTTAT................................................................................................................................................................................................................. | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................TCGCTTTGTGCAAAAGTTTG................................................................................ | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................................................................................CGAAAGTTTGCAGCGTAGCTT..................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................ATCGCTTTGTGCAAAAGTTTG................................................................................ | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......CCGGGACTGGACGCCTAAAA............................................................................................................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...GCCACCGGGGCTGGACGCCTGA................................................................................................................................................................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................................................TTCGGTAAAGAAGACGTCGGTA................................................. | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................AGAATTAAGCATTCGGTTTG.............................................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................TACGTCGCACAAGATGTAAGA............................................................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................GGTTTGGATACAAATTCTGCAT.............................................................................................................................. | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................TCCTTCGGTCCATATGTATGT............................................................................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................GGTCGGTAACGTTAAAGTAGC.................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................AAGATATCAGAATTAAGCATTCGGTTT............................................................................................................................................... | 27 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...................................................................................................................................................................................TTCGGTAAAGAAGACGTCGGT.................................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................................ACAAGTTCTCCATCAAATAAATT.................................................................................................................... | 23 | 3 | 5 | 0.80 | 4 | 0 | 0 | 0 | 4 | 0 | 0 | 0 |
| .............................................................GTCGTTGCTTACGTCGTACAGGT...................................................................................................................................................................... | 23 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................................TACAAGTTCTCCATCAAA.......................................................................................................................... | 18 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................................................................................................................................................................................TTAAAGTAGCGCAAC............................... | 15 | 1 | 12 | 0.08 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................AGTGTGCAGAGTAGTTTCG................................................................... | 19 | 3 | 15 | 0.07 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/23/2015 at 10:28 PM