ID:

dsi_10451

Coordinate:

3r:14891749-14891898 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.7 -19.7 -19.7

Flybase annnotation

exon [3r_14889943_14891748_-]; CDS [3r_14889943_14891748_-]; intron [3r_14891749_14899067_-]

No Repeatable elements found

mature
  1. 2l:12411221-12411235 +
  2. 2l:22881212-22881226 -
  3. 3l:23816567-23816581 -
  4. dsi_10451  3r:14891841-14891855 -
  5. 3r:21820633-21820647 -
  6. node_105220:42-56 -
  7. node_17019:302-316 +
  8. node_106157:71-85 +
  9. node_35476:114-128 +
  10. node_72128:52-66 -
  11. node_41843:73-87 +
  12. node_87338:47-61 +
  13. node_99857:24-38 +
  14. node_13533:142-156 +
  15. node_66602:732-746 +
  16. node_129621:47-61 +
  17. node_52256:937-951 -
  18. node_113055:130-144 +
  19. node_59074:446-460 -
  20. node_53746:29-43 -
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATAAAATGAAATAGTATATTCTTGCAGAGCGAGCAAATACTTGATTCCTATATAGTATGCAATAAATGCAATAGCAATGCTAGTTATTTGAAATAAAAAATATAACGAATTTCTTATTTTTTAGGAGTTTTGAGATTTAAGACATTTTTTGTTATTTTGTATTAACTGTATTTATAACCAAATGTATTTTACTTCTGCAGGATGCGGCTGGACCCTCGCTGGACTTTTATGTATCCGACTCGATGCAGGA
**************************************************.......((((.((((((...((((...))))..))))))...............((((.((((((.....)))))).)))).((..((((((((((...(((((...((((.....))))..))))).))))))..))))..)))))).**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
SRR553485
Chicharo_3 day-old ovaries
SRR618934
dsim w501 ovaries
...........................................................................................................................................................................................................................TGGACTTTTATGTATCCGACTCGATGCA... 28 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................TTCCGCATGATGCGACTGGAC..................................... 21 3 2 0.50 1 0 1 0 0
........................................................................................TGAAATAACAAAAAGAACGAAT............................................................................................................................................ 22 3 13 0.08 1 0 0 1 0
............................................................................................................................................................................................TTACTTGTGCAGGAT............................................... 15 1 15 0.07 1 1 0 0 0
........................................................................................................................................................................................................GATGCGGCGGGACCCG.................................. 16 2 20 0.05 1 0 0 0 1
.............................................................................................TAAAAAATATAACGA.............................................................................................................................................. 15 0 20 0.05 1 0 0 1 0
........................................................................................................................................................................TAGTTCTAACCATATGTATT.............................................................. 20 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

TATTTTACTTTATCATATAAGAACGTCTCGCTCGTTTATGAACTAAGGATATATCATACGTTATTTACGTTATCGTTACGATCAATAAACTTTATTTTTTATATTGCTTAAAGAATAAAAAATCCTCAAAACTCTAAATTCTGTAAAAAACAATAAAACATAATTGACATAAATATTGGTTTACATAAAATGAAGACGTCCTACGCCGACCTGGGAGCGACCTGAAAATACATAGGCTGAGCTACGTCCT
**************************************************.......((((.((((((...((((...))))..))))))...............((((.((((((.....)))))).)))).((..((((((((((...(((((...((((.....))))..))))).))))))..))))..)))))).**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
SRR618934
dsim w501 ovaries
.......................................................................................................................................................................................................................................ATAGGCTGAGCGACGTCGT 19 2 1 1.00 1 1 0
................................................................................................................................................................................................................ACCCGGGAACGACCTGAA........................ 18 2 10 0.10 1 0 1
....................................................................................................ATATTGCTGAAAGCATA..................................................................................................................................... 17 2 14 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:14891699-14891948 - dsi_10451 ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAATAGTATATTCTTGCAG---------AGCGAGCAAATACTTGATT----CCTATATAGTATGCAATAAATGCAATAGCAATGCTAGTTATTTGAAATAAAAA--------------------------ATATAACGAATTTCTTATTTTTTAGGAGTTTTGAGATTTAAGACAT-------------------TTTTTGTTAT-TTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAACTGTATTTA----TAACC-AAATGT-ATTTTACTT-----CTGCAGGATGCGGCTGGACCCTCGCTGGACTTTTATGTATCCGACTCGATGCAG----------GA
droSec2 scaffold_0:15758060-15758300 - ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAATAGTATATTCTTGCAG---------AGCGGGCAAATACTTGATT----CCGATATAGTATGC---------AATAGCAATGCTTGTTATTTGAAATAAAAA--------------------------ATATAACGAATTTCTTATTTTTTAGGAGTTTCAGGATTTAAGACAT-------------------TTTTTGATAT-TTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAACTATATTTA----TAATC-AAATGT-ATTTTACTT-----CTACAGGATGCAGCTGGACCCTCGCTGGACTTTTATGTATCCGACTCGATGCAG----------GA
dm3 chr3R:6183521-6183870 + ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAATAGTATATTCTTGCAT---------AGCGGGCAAATACTTGATT----CCTATATAGTATGCAATAAATGCAATAGAAATGCTTGTTATTTGAAATAAAAA--------------------------ATATAA-----------------------------------GATAT-------------------TTTTT--TAT-TTTGAAATAATTAAGCAACTAATCAGTTATTGTTATATCTTTTAACGATAGAAATATATTGGCAGTGCAA-AAATGACACACTAGAAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGGTTAT-------------------TGACCAAAACATTTTAAAAAGCTTAAAAACAATATCAACTGTATTTACATAT-ATCAAAATGT-ATTTTACTTCTGCTCTGCAGGATGCGGCTGGACCCTCGCTAGACTTTTATGTATCCGACTCGATGCAG----------GA
droEre2 scaffold_4770:15432935-15433049 - TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC-------------------TCCATATCAT-TTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTATTTA----TAACC-AAATGT-ATGTAACTTCTGTTCTGCAGGATGCGGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GA
droYak3 3R:10211257-10211352 + TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGTATTTA----TAACC-AGATGT-ATGTAACTTCTGTTCTGCAGGATGCGGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GA
droEug1 scf7180000409881:479421-479732 - AATGTATATTTGTTTGTTGAGAGATTGTTGAAATAAAAATCTTTGT-----------------------------------------------------------------CATGGAAATATTATCCAACGTTAAATCATATTTTTTAAAAGATATTTCTAGTTATTCAAATGCTTATGAATTTGTATATTCT-GTATATTAGTTAATGTTAATAGATACTTGATCTTAACCAATAAAATATAA---------AATATC-----------------------------------------------------------------------TTAAGAG-------------------------GTCAGAATCCTATTATTGTTAAAA-----------------------------------------------------------------------------------------C-----------------------------------------------------------------------TCT-------TTT----------------------------------------------------------------TA---------------------------------------------------------------------------------------ATTCA----TTACTAAAATGTTACATAATTTGCTTATTGCAGGATGCTGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GA
droBia1 scf7180000302402:8268386-8268472 + ATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----TAACCAAAATGT-ATATCTCTTTCGTTTTGCAGGATGCGGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GA
droTak1 scf7180000415380:1462618-1462840 - GCTT----------------------TTTAAAATAAAAACCACTAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATTTACGGTCCCTGATATTTATGACATAAATATT------------AAAT----TACA-----------------------------------------------------------------------------------------T-----------------------------------------------------------------------CCT-------TTC----------------------------------------------------------------TTTTTCAACACCAGAAAGTGTTGTGTAC-------------------TGACTACGATATAAAAAACAGTTTGA---------------TATTGA----TAATAAAAATGT-ACGTTACTTCCGTTTTGCAGGATGCGGCTGGACCCTCGCTGGACTTTTATGTATCCGACTCGATGCAG----------GA
droEle1 scf7180000491080:48702-49134 - ATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAAATA---------------------------------------------------------------------------------------------AATACATTGTATGTATGGTTAAAATTAAATTTTAAAA-----------------------------------GGCAA-------------------TGTTT--TAT-TCAGGGTTTTCT---------AACAGGTTTTGATATCACTTTACAATTTACAAATAAATTAGCTACGCTAGTAACGACTTCTTTGAAAAAAAAACTGCAATACCAAATTTGTAAGTAGCGATATATAGATACTATAGGATACCCCAATTTATTTTTTCACCGCCTTTGCAATTTCTTTCCAAACAAGCAATTAATTTGGAAATATCCTATGTTCTGTGTTGCTAGCCTTAATCGAACAGTTCTACACCACAAAAAAGGATTGTCTTTTGCATTAATGCTTTTTGTTTGACTAAA-------------------------------------AA----TAAGTAAAATGT-ACATCAATTTCGTTTTGCAGGATGCGGCTGGACCATCGTTGGACTTTTACGTTTCGGACTCAATGCAG----------GA
droRho1 scf7180000768822:17827-17918 - ATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA----TAACTAACATGT-ATGTCACTTCCGTTTTGCAGGATGCGGCTGGACCCTCGCTGGACTTTTACGTGTCCGACTCGATGCAG----------GA
droFic1 scf7180000453800:2262386-2262590 + AAATAACATT----------------------------------TGTATTTTTTGTTTATCATCTATAACAAAATTTAACAAGACGAATTGCGAAAAATTTTAAACTTAGTC--G------------------------------------------------------------GCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGAATGACACTTCTGTTAA-A-----------------------------------------------------------------------------------------C-----------------------------------------------------------------------TC----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAAGAA-TTAC----TTGTTAAAATGG-ATTTCGCCTTCTTTTTGCAGGATGCCGCTGGACCCTCGCTGGACTTTTATGTATCCGATTCGATGCAG----------GA
droKik1 scf7180000302475:1367817-1367900 + TTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAG-AAACGT-GTTTTATTCGCA-ATTGCAGGACGCAGCTGGGCCCTCGCTGGATTTCTACGTCTCCGACTCAATGCAG----------GA
droAna3 scaffold_13340:910146-910220 + AACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-GTGTCCTTTTCG-ATTGCAGGACTGCGCTGGACCCTCGCTGGACTTCTACGTCTCCGACTCGATGCAG----------GA
droBip1 scf7180000394085:86748-86801 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGACGGCGCTGGTCCCTCACTGGACTTTTATGTCTCCGACTCGATGCAG----------GA
dp5 2:7285018-7285112 - ATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCG----TGACTCAAATGT-ACATTTCCTATCCCTTGCAGGATGCGGCTGGCCCTTCGCTAGACTTTTACGTGTCCGACTCGATGCAG----------GA
droPer2 scaffold_0:1146013-1146107 - ATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCG----TGACTGAAATGT-ACATTACCTATCCCTTGCAGGATGCGGCTGGCCCTTCGCTAGACTTTTACGTGTCCGACTCGATGCAG----------GA
droWil2 scf2_1100000004902:127977-128042 - TAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATATTTTTAGGATGCTGCTGGTCCATCTTTGGATTTTTATGTATCCGACTCCATGCAG----------GA
droVir3 scaffold_12875:16368196-16368303 + TATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------GTTTGTAATAATAT--------------------------TT-------TTTTTTTGTTTTTTGTGTGTTTTGCAACTAACATATT-------------------TTTTTGTGAA-ATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAATGTATATA----TG------------------------------------------------------------------------TAAACAAAACACACTGTGC
droMoj3 scaffold_6540:4977829-4977901 - ATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGT-ATATTT-----G-TTCACAGGATGCGACGGGGCCTTCGCTGGACTTTTATGTGTCCGACTCCATGCAG----------GA
droGri2 scaffold_14906:5317649-5317704 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGGATGCCGCAGGACCCTCGCTGGACTTTTATGTGTCCGACTCGATGCAG----------GA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAATAGTATATTCTTGCAG---------AGCGAGCAAATACTTGATT----CCTATATAGTATGCAATAAATGCAATAGCAATGCTAGTTATTTGAAATAAAAA--------------------------ATATAACGAATTTCTTATTTTTTAGGAGTTTTGAGATTTAAGACAT-------------------TTTTTGTTAT-TTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAACTGTATTTA----TAACC-AAATGT-ATTTTACTT-----CTGCAGGATGCGGCTGGACCCTCGCTGGACTTTTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTTTATGTATCCGACTCGATGCA.............2811.00100000000010000000
.....................................................................................................................................................................................................................................................................................TAAAAA--------------------------ATATAACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000010000000000
droSec2
ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAATAGTATATTCTTGCAG---------AGCGGGCAAATACTTGATT----CCGATATAGTATGC---------AATAGCAATGCTTGTTATTTGAAATAAAAA--------------------------ATATAACGAATTTCTTATTTTTTAGGAGTTTCAGGATTTAAGACAT-------------------TTTTTGATAT-TTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAACTATATTTA----TAATC-AAATGT-ATTTTACTT-----CTACAGGATGCAGCTGGACCCTCGCTGGACTTTTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.............................................................................................................................................................................................................................................................................................................................AATTTCTTATTTTTTAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.............................................................................................................................................................................................................................................................................................................................AATTTCTTATTTTTTAGGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0711000
dm3
ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAATAGTATATTCTTGCAT---------AGCGGGCAAATACTTGATT----CCTATATAGTATGCAATAAATGCAATAGAAATGCTTGTTATTTGAAATAAAAA--------------------------ATATAA-----------------------------------GATAT-------------------TTTTT--TAT-TTTGAAATAATTAAGCAACTAATCAGTTATTGTTATATCTTTTAACGATAGAAATATATTGGCAGTGCAA-AAATGACACACTAGAAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGGTTAT-------------------TGACCAAAACATTTTAAAAAGCTTAAAAACAATATCAACTGTATTTACATAT-ATCAAAATGT-ATTTTACTTCTGCTCTGCAGGATGCGGCTGGACCCTCGCTAGACTTTTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTTAT-------------------TGACCAAAACAT....................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACCCTCGCTAGACTTTTATGTA...........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGCGGCTGGACCCTCGT.........................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGTATCCGACTCGATGCAG----------GA2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTTAT-------------------TGACCAAAACATTTTAAA..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTATCCGACTCGATGCAG----------G.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCAGTGCAA-AAATGACA...............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGTATCCGACTCGATGCAG----------GA2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACTTCTGCTCTGCAGGATGCGGC....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTCTGCAGGATGCGGCTGGACCCTC...........................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTTTACTTCTGCTCTGCAGGATGCGGC....................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTCTGCTCTGCAGGATGCGGCTGG.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TCTTGCAT---------AGCGGGCAAATACTTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCAA-AAATGACACACTAGAAAAA....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCGCTAGACTTTTATGTATCCGAC.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-ATTTTACTTCTGCTCTGCAGGAT.........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGTATCCGACTCGATGCA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTTTTATGTATCCGACTCGATGCA.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTCTGCTCTGCAGGATGCGGC....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGACTTTTATGTATCCGACTCGA.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGCTGGACCCTCGCTAGACTTT.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TATATTCTTGCAT---------AGCGGGCAAATACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCGCTAGACTTTTATGTATCCGAC.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTAT-------------------TGACCAAAAC......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTCTGCTCTGCAGGATGCGGC....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTTTAACGATAGAAATATATTGGC...............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATCCGACTCGATGCAG----------GA2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TATATTCTTGCAT---------AGCGGGCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AATGCAATAGAAATGCTTGTTATTTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTCTGCAGGATGCGGCTGGACCCT............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGGTTAT-------------------TGACCAAAACA.....................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTTTTATGTATCCGAC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-------------------TGACCAAAACATTTTAAAAAGCT.........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACCCTCGCTAGACTTTTATGTATCC........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGT-ATTTTACTTCTGCTCT................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGGTTAT-------------------TGACCAAAA.......................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACCCTCGCTAGACTTTTATGT............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTTGAAATAAAAA--------------------------ATATAG-----------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................A-----------------------------------GATAT-------------------TTTTT--TAT-TTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................TATAGTATGCAATAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1780.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC-------------------TCCATATCAT-TTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTATTTA----TAACC-AAATGT-ATGTAACTTCTGTTCTGCAGGATGCGGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
No Reads
droYak3
TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGTATTTA----TAACC-AGATGT-ATGTAACTTCTGTTCTGCAGGATGCGGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCTATGTATCCGACTCGATGCAG----------GA28110.0010000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCTATGTATCCGACTCGATGCAG----------GT2811.00100000000001
droEug1
AATGTATATTTGTTTGTTGAGAGATTGTTGAAATAAAAATCTTTGT-----------------------------------------------------------------CATGGAAATATTATCCAACGTTAAATCATATTTTTTAAAAGATATTTCTAGTTATTCAAATGCTTATGAATTTGTATATTCT-GTATATTAGTTAATGTTAATAGATACTTGATCTTAACCAATAAAATATAA---------AATATC-----------------------------------------------------------------------TTAAGAG-------------------------GTCAGAATCCTATTATTGTTAAAA-----------------------------------------------------------------------------------------C-----------------------------------------------------------------------TCT-------TTT----------------------------------------------------------------TA---------------------------------------------------------------------------------------ATTCA----TTACTAAAATGTTACATAATTTGCTTATTGCAGGATGCTGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotal
No Reads
droBia1
ATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----TAACCAAAATGT-ATATCTCTTTCGTTTTGCAGGATGCGGCTGGACCCTCGCTGGACTTCTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotal
No Reads
droTak1
GCTT----------------------TTTAAAATAAAAACCACTAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATTTACGGTCCCTGATATTTATGACATAAATATT------------AAAT----TACA-----------------------------------------------------------------------------------------T-----------------------------------------------------------------------CCT-------TTC----------------------------------------------------------------TTTTTCAACACCAGAAAGTGTTGTGTAC-------------------TGACTACGATATAAAAAACAGTTTGA---------------TATTGA----TAATAAAAATGT-ACGTTACTTCCGTTTTGCAGGATGCGGCTGGACCCTCGCTGGACTTTTATGTATCCGACTCGATGCAG----------GASizeHit CountTotal NormTotal
No Reads
droEle1
ATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTAAATA---------------------------------------------------------------------------------------------AATACATTGTATGTATGGTTAAAATTAAATTTTAAAA-----------------------------------GGCAA-------------------TGTTT--TAT-TCAGGGTTTTCT---------AACAGGTTTTGATATCACTTTACAATTTACAAATAAATTAGCTACGCTAGTAACGACTTCTTTGAAAAAAAAACTGCAATACCAAATTTGTAAGTAGCGATATATAGATACTATAGGATACCCCAATTTATTTTTTCACCGCCTTTGCAATTTCTTTCCAAACAAGCAATTAATTTGGAAATATCCTATGTTCTGTGTTGCTAGCCTTAATCGAACAGTTCTACACCACAAAAAAGGATTGTCTTTTGCATTAATGCTTTTTGTTTGACTAAA-------------------------------------AA----TAAGTAAAATGT-ACATCAATTTCGTTTTGCAGGATGCGGCTGGACCATCGTTGGACTTTTACGTTTCGGACTCAATGCAG----------GASizeHit CountTotal NormTotal
No Reads
droRho1
ATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA----TAACTAACATGT-ATGTCACTTCCGTTTTGCAGGATGCGGCTGGACCCTCGCTGGACTTTTACGTGTCCGACTCGATGCAG----------GASizeHit CountTotal NormTotal
No Reads
droFic1
AAATAACATT----------------------------------TGTATTTTTTGTTTATCATCTATAACAAAATTTAACAAGACGAATTGCGAAAAATTTTAAACTTAGTC--G------------------------------------------------------------GCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGAATGACACTTCTGTTAA-A-----------------------------------------------------------------------------------------C-----------------------------------------------------------------------TC----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAAGAA-TTAC----TTGTTAAAATGG-ATTTCGCCTTCTTTTTGCAGGATGCCGCTGGACCCTCGCTGGACTTTTATGTATCCGATTCGATGCAG----------GASizeHit CountTotal NormTotal
No Reads
droKik1
TTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAG-AAACGT-GTTTTATTCGCA-ATTGCAGGACGCAGCTGGGCCCTCGCTGGATTTCTACGTCTCCGACTCAATGCAG----------GASizeHit CountTotal NormTotal
No Reads
droAna3
AACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-GTGTCCTTTTCG-ATTGCAGGACTGCGCTGGACCCTCGCTGGACTTCTACGTCTCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGACGGCGCTGGTCCCTCACTGGACTTTTATGTCTCCGACTCGATGCAG----------GASizeHit CountTotal NormTotal
No Reads
dp5
ATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCG----TGACTCAAATGT-ACATTTCCTATCCCTTGCAGGATGCGGCTGGCCCTTCGCTAGACTTTTACGTGTCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGTCCGACTCGATGCAG----------G.2211.0010100000000
droPer2
ATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCG----TGACTGAAATGT-ACATTACCTATCCCTTGCAGGATGCGGCTGGCCCTTCGCTAGACTTTTACGTGTCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
No Reads
droWil2
TAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGATATTTTTAGGATGCTGCTGGTCCATCTTTGGATTTTTATGTATCCGACTCCATGCAG----------GASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
No Reads
droVir3
TATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------GTTTGTAATAATAT--------------------------TT-------TTTTTTTGTTTTTTGTGTGTTTTGCAACTAACATATT-------------------TTTTTGTGAA-ATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAATGTATATA----TG------------------------------------------------------------------------TAAACAAAACACACTGTGCSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................AATAT--------------------------TT-------TTTTTTTGTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.081001000000000000000000000000000000000000000000000000000000000000
droMoj3
ATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGT-ATATTT-----G-TTCACAGGATGCGACGGGGCCTTCGCTGGACTTTTATGTGTCCGACTCCATGCAG----------GASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGGATGCCGCAGGACCCTCGCTGGACTTTTATGTGTCCGACTCGATGCAG----------GASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/18/2015 at 06:04 PM