dsi_10441

GAATAATTGGTGAGCAAGAGGTTTTGGAGAGTCTCAGTCCATCTTGCTCTGGCAGGCGCAACAAGCGATCACTGATAAGCAGAGAACCGTAATGGAAGCGAAACAACCACTCGCTCTCTTGCGCTCTCTGTTCCTTTCCCGTGTTCCCCCTGTTCCGTTTCAATTATACAATTTTCGACCGTTTCTTTTGCCTTTTACAGTTGTGCGGCACACACAGTTGTTCGTCGTCAGCGGTGGTGAACGGAGTGGA *************************************************************************.....((((...(((((.(((.((((.........))))))).)))))))))*************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR902009 testis	SRR553488 RT_0-2 hours eggs	M025 embryo	O001 Testis	SRR553487 NRT_0-2 hours eggs	M053 female body	M023 head	M024 male body
.......................................................................................................................................................................................................................AGTTGTTCGTCGTCAGC..................	17	0	1	2.00	2	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................TTCGTCGTCAGCGGTGGTGAACGGA.....	25	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGTTGTTCGTCGTCAGCG.................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TTGTTCGTCGTCAGCGGTGGT............	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGTTGTTCGTCGTCAGCGGTGGTG...........	24	0	1	1.00	1	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................ACAGTTGTTCGTCGTCAGC..................	19	0	1	1.00	1	0	0	0	1	0	0	0	0	0
...........................................................................TAAGCAGAGAACCGTAATGGAAGCGAA....................................................................................................................................................	27	0	1	1.00	1	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................GTTCGTCGTCAGCGGTGGTGAAC........	23	0	1	1.00	1	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................GTTCGTCGTCAGCGG................	15	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.............................................................................................................CTCGCTCTCTTGCGCTCT...........................................................................................................................	18	0	1	1.00	1	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................GCGGTGATGAACGGAGTG..	18	1	1	1.00	1	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TTTTGCCTTTTACAGTTGTGCGG..........................................	23	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................GTGGTGAACGGAGTGGA	17	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCTTTTTAGGGTTGTGCGGCAC.......................................	22	3	2	0.50	1	0	0	0	0	0	1	0	0	0
......................................................GGCGCAACAAGCGAGGACTGTT..............................................................................................................................................................................	22	3	2	0.50	1	0	1	0	0	0	0	0	0	0
.........................................TCTTGCTATGGCAGG..................................................................................................................................................................................................	15	1	7	0.14	1	1	0	0	0	0	0	0	0	0
...............................TCTCAGTCCATGTTG............................................................................................................................................................................................................	15	1	9	0.11	1	0	0	1	0	0	0	0	0	0
GAATAATTGGAGGGCAAG........................................................................................................................................................................................................................................	18	2	10	0.10	1	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................GTTTCTTTTGCGTTTAAC....................................................	18	2	14	0.07	1	0	0	0	0	0	0	0	1	0
GAACAATTGGTGGGCAAG........................................................................................................................................................................................................................................	18	2	15	0.07	1	0	0	0	0	0	0	0	0	1
....................................................................................................................TCTTGCGCTCTCTGGTA.....................................................................................................................	17	2	16	0.06	1	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGTTGCTCGTCGTCA....................	15	1	19	0.05	1	0	0	1	0	0	0	0	0	0
..................AGGTCGAGGAGAGTCTCAG.....................................................................................................................................................................................................................	19	3	19	0.05	1	0	0	1	0	0	0	0	0	0

CTTATTAACCACTCGTTCTCCAAAACCTCTCAGAGTCAGGTAGAACGAGACCGTCCGCGTTGTTCGCTAGTGACTATTCGTCTCTTGGCATTACCTTCGCTTTGTTGGTGAGCGAGAGAACGCGAGAGACAAGGAAAGGGCACAAGGGGGACAAGGCAAAGTTAATATGTTAAAAGCTGGCAAAGAAAACGGAAAATGTCAACACGCCGTGTGTGTCAACAAGCAGCAGTCGCCACCACTTGCCTCACCT *************************************************************************************************************************.....((((...(((((.(((.((((.........))))))).)))))))))*************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs	M024 male body	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries
....................................................................................................................................................................................................................GTGTCAACAAGCAGAA......................	16	1	1	1.00	1	1	0	0	0	0
.................CTCCAAAACCTATCAGTG.......................................................................................................................................................................................................................	18	2	2	0.50	1	0	0	1	0	0
................................................................................................................................................AGGGGGACAAGGCCA...........................................................................................	15	1	4	0.25	1	0	1	0	0	0
..........................................................................................................................................................................................................................................ACCACTTGTCTCACC.	15	1	9	0.22	2	1	1	0	0	0
.................................................................................................................................................................................................AAATGTCAACTCGCCGT........................................	17	1	5	0.20	1	0	1	0	0	0
...................................................................................................................................................................................................................TGTGTCAACTGGCAGCA......................	17	2	5	0.20	1	0	0	0	1	0
..................................................................................................................................................................................................................................CAGTCGCCACCACTT.........	15	0	8	0.13	1	0	0	0	1	0
..........................................................................................................................................................................................................................................ACCACTTGCCACACC.	15	1	11	0.09	1	0	1	0	0	0
................................................................................................................................................................................................AAATTGTCAACTCGCCGT........................................	18	2	11	0.09	1	0	1	0	0	0
..........................................................................................ATACCTTCGCTTTGT.................................................................................................................................................	15	1	13	0.08	1	1	0	0	0	0
..............................................................................................................................................................................................GCAAAATGTCTACACGGCG.........................................	19	3	20	0.05	1	0	0	0	0	1
..............................................................................................................................................................................................GGAAAATGGCAACTCG............................................	16	2	20	0.05	1	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:9893246-9893495 -	dsi_10441	GAAT--AA-TT--------GGTGAGCAAGAGGTTTTGGAGAGT----------CTCAGTCCATCTTGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------GA-GA-------------ACCGTAATGGAAGCGAAACA---ACCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCTTTC----CCGTGTTCCCCCTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA
droSec2	scaffold_1:6747868-6748117 -		GAAT--AA-TT--------TGTGAGCAAGAGGGTTTGGAGAGT----------CTCAGTCCATCTTGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------GA-GA-------------ACCGTAATGGAAGCGAAACA---ACCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCTTTC----CCGTGTTCCCCCTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA
dm3	chr2R:9224804-9225055 -		GAAT--AA-TG--------TGCGAGCAAGAGGGT-TGGGGAGT----------CTCAGTCCATCCTGCTCTCG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCAGTGATAAGCA--------------GA-GA-------------ACCGTAATGGAAGCGAAACA---TCCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------TT-C--------------------------------------GTTCCTTTC----CCGTGTTCCCCCTGTTCCG-----TTTCAATTATA----CAAATTTCGACCGTTTCTTTTGCC--TTTTACAGTTCCG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA
droEre2	scaffold_4845:16590256-16590475 +		GAAT--AA-TG--------TGCGAGCGAGAGGGC--GG----TG---------CTA-----------------------------------AGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------TAGGA-------------ACCGTAATGGAAGCGAAACC---GCC------------GCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCATTC----C-G-------CGTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTCTGCC--TTTTACAGTTGTG-CGGCGC--GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA
droYak3	2R:7734263-7734517 +		GAAT--AA-TG--------TGCGAGCGAGAGCGT--GG----TG---------CTCAGGCCATCTCGCTCTCG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------TA-GA-------------ACCGTAATGGAAGCGAAACA---CCCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCTTTC----CTCCGTTTCCCTTGTTCCA-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGCGGA---GCGGAGCGGA
droEug1	scf7180000409663:1033677-1033936 -		GAAT--AA-TG--------TGCGAGTAAGAGAAA--AAATAATA---------TTTAGGCTATCCCGCTTTAG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCGGTGAGC------GAA-AGA-------------ACCGTAATGGTAGCGAGACA---CCCACT--------CTCTCA-----------TT----TATGCTCCCTC--------------------------TCTACTCTCTGTCTCTCTTTTTACGTCTCTCTCCAAATGTTCTCTTC----TCGAATTG--CCTGTTTCA-----TGTCATT---------------------TTTCTTTTGCC--TTTTACAGTT------------------------G----TTCGACGTCAGTGGTGAAGAACGGAACG-------------GA
droBia1	scf7180000302291:968971-969213 +		GAAT--AA-TG--------CGCGAGGGAGAGGGT--GGTCAGC----------CTCAGGCTGCTCCGCTCCGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCGCTGATAAGCGG--AGC------GAA-AGA-------------ACCGCGATGGAAGCGGAACA---CCCCCT------------CT--CT-------T-GCC-------GCTCGTC--CGCGCTCTCTCT------------------------------------------------GTTCCCTTC----CTGCGTTC--CCTGTTCCG-----TTCCGATT-TA----CAATTCTCGAACGCTTCTCTTGCC--TTTTACAGTTGTG-CG---------------------------ACGTCAGTGGTGGAGAACGGAACG-------------GA
droTak1	scf7180000415379:390690-390972 -		GAAT--AA-TG--------TGCGAGTGAGAGGGG--GGATAGTG---------CTGAGGCCGTCTCGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCGGTGAGC------GAA-AGA-------------ACCGTAATGGAAGCGAAACA---CCCACT-CTCCATTCACTCTTTATTCACTCTC----------TATTCACACACTCTCTCTCTCG------------------------------------------------GTTCTTTTC----TCGCATTC--CCTGTTCCA-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CGACG---ACACACACAGTTG--------TCGGCAGTGGTGGTGAACGGAACG-------------GA
droEle1	scf7180000491282:448610-448851 -		GAAT--AA-TG--------TGCGAGAGAGAAGGT--GGATA-C----------ATCAGACCATCTCGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA-----------------GA-------------ACCGTAATGGAAGCGAAACA---CTCTCT------------CT-----------CA-----------------CGCTCTCACTCTCT------G---TTCATTCTTT-CT--------------------------------------TTTCGTTC--CCTGTTCCG-----TTTCAAATATA----CAATT-TCGACCGTTTCTTTCG----TTTTACAGTTGCGGCG--------ACA-ACAGTTT----TTCGACGGCGCTGGCCGAGAGAGGAACA-------------GA
droRho1	scf7180000779889:52266-52527 -		GAAT--AA-TG--------TGCGAGGAAGAGGTT--GGATAATG---------GTCAGGCCATCTCGCTTTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA-----------------GA-------------ACCGTAATGGAAGCGAAACACCAC----C--------CTCTCT-----------C-GAC-------ACTCTCT--CTCTCTCTCTCT------------------------------------------------GTTCTTTTT---CTAGCGTTC--CCTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CGGTGCGACGACACACAGTTG----TTCGACGTCACTGGTGGAGAACGGAACA-------------AA
droFic1	scf7180000454039:31544-31798 -		GAAT--TA-TG--------TGCGAGTGAGAGGGT--GGATAACG---------CTCCGTCCTTCTCGCTCTGC-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCGATGAGC------GGA-AGA-------------ACCGTAATGGAAGCGAAACA---CCCACT-CT-----CGCTCT-----------CC----T-----------------TCTCTCTCA------------------------------------------------GTTCTTTTC----TGGCGTTC--CCTGTTCCA-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCT--TTTTACAGTTGTG-CG--------ACACACAGTTG----TTCGACGTCAGTGGTGGAGAACGGAACG-------------GA
droKik1	scf7180000302277:613529-613693 +		GAAT--AA-TG--------G----------------------A----------GTCAGGCCATCCCGCTCTGC----------------------------CCAGCGA--------------------------------------TCACTGATAAGCGGTGAGT------GAG-GCA-------------ACCGTTATGGAAGCGAGACA---CCCGCA--------ATCTCT--CTTT-----AG----T-----------ACGCTCTCTCTCTCT------------------------------------------------GTAATTG-T----CAGTGTTG--GCAGTTTCGATTTTTTTTAAATCTA----AAATTTTC----------------------------------------------------------------------------------------------------
droAna3	scaffold_13266:16531906-16532193 -		AATT--AA-CG--------GGAATGGGACCA--------GGGT----------CTAATGCCATCCCACTCTGGCCTGGCC------AGGAGAAGCG--CAACAAGCGA--------------------------------------TCACTGATAAGGGT--ACT--------GA-GAGTCTAGGTGA-GAG----------CACGAA--A---CCCACCACCCCACACACTCTCACTTTACTCTC----------ACTAC--ACACTCTCCCTCGCTATCACTCTCC--------------------------------------GCTCAGTCCGCCCGAGAGTGC--CCTGAC--------------------------GAATCGCCCGATTCTTTCGCT--TATTACAGTTGTGGCG------GCATTCTCATTTCGAGTTTC----------GTGGCGAGCGGACCGACGACCCGACATGGC
droBip1	scf7180000396384:644047-644345 -		GAGG--TA--C--------TGCGAGTAACGGGAC--CGAGGCCGCCCTCGGGGCTAATGCCATCCCACTCTCT---GGCCAAAAGAAGAAGAAGCG--CAACAAGCGA--------------------------------------TCACTGATAAGGGT--ACTACTAGGGAGA-GAG-CTAGGTGA-GAGCGGCTATGCCAGCGAAACCC-AC----CACCCCACACACTCTCACTACACACTC---------------------TCTCCCTCGCTATCACTCTCC--------------------------------------GCTCATTCC----ACGAGTGC--CCTGAC--------------------------GAATCGCCCGATTCTTTCGCT--TATTACAGTTGTGGCG------GCATTCTCATTTCGAGTTT----------CGTAGCGACCGGACCG----CC-------CG
dp5	3:688309-688528 +		GAAAATAA-TAAAGAGAGGTGGAAGTGAGAGAAA--------TG---------C--------TTTCGCTCTCG-----------------CGATC---------------GACGACGCCGCAGC------------------GCTGCCTCTGATAAGAG-----------------GG-------------AACAAAGTGGAATCGAAACC--AC----C--------TTCTCT-----------CTGACGCAGAATACTCG--------------------------TACACTCTCT-TG--------------------------T------------TTCATTT--GCCGTTCCG-----TTTCAATTATACCTACAATTT-----CGTTTCTCTTTCTGTCTTTACAGCT----CG------ACTCATTCAATT------------------------------------------------
droPer2	scaffold_2:854752-854971 +		GAAAATAA-TAAAGAGAGGTGGAAGTGAGAGAAA--------TG---------C--------TTTCGCTCTCG-----------------CGATC---------------GACGACGCCGCAGC------------------GCTGCCTCTGATAAGAG-----------------GG-------------AACAAAGTGGAATCGAAACC--AC----C--------TTCTCT-----------CTGACGCAGAATACTCG--------------------------TACACTCTCT-TG--------------------------T------------TTCATTT--GCCGTTCCG-----TTTCAATTATACCTACAATTT-----CGTTTCTCTTTCTGTCTTTACAGCT----CG------ACTCATTCAATT------------------------------------------------
droWil2	scf2_1100000004822:2082864-2082888 -		GAGT--GAGTG--------AGTGAGTGAGAGGTT--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_15245:10731945-10732119 -		GAAT--C--TA--------TGCGATGG-----TT--GCCTAG------------TAGTGCTATCTCGCTCTGC-------------GA--CGGGCGCTCAACAAGAGATCGGCGACGTCGCCGCTGACGTCGACTGCGCGTCGC--TCGCTGATAAGCA--------------TGTGAG-CCATATGGGGGCACAAAGTGAGAATGAAACG---TGCGCC--------CGCTTC---CAA-----AT----T-----------------GCGCTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GAAT--AA-TT--------GGTGAGCAAGAGGTTTTGGAGAGT----------CTCAGTCCATCTTGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------GA-GA-------------ACCGTAATGGAAGCGAAACA---ACCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCTTTC----CCGTGTTCCCCCTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGC...............................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTCGTCAGCGGTGGTGAACGGA..................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCG..............................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----TTCGTCGTCAGCGGTGGT.........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGGTG........................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTG----TTCGTCGTCAGC...............................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................TAAGCA--------------GA-GA-------------ACCGTAATGGAAGCGAA......................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TTCGTCGTCAGCGGTGGTGAAC.....................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TTCGTCGTCAGCGG.............................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................CT--------CGCTCT-----------CT----T-----------------GCGCTCT..................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCC--TTTTACAGTTGTG-CG------G...........................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGAACGGAGTG-------------GA	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

GAAT--AA-TT--------TGTGAGCAAGAGGGTTTGGAGAGT----------CTCAGTCCATCTTGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------GA-GA-------------ACCGTAATGGAAGCGAAACA---ACCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCTTTC----CCGTGTTCCCCCTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGTG-------------..	18	1	3.00	3	0	1	1	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----TTCGTCGTCAGCGGTGGTGAA......................	24	1	1.00	1	0	0	1	0

dm3

GAAT--AA-TG--------TGCGAGCAAGAGGGT-TGGGGAGT----------CTCAGTCCATCCTGCTCTCG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCAGTGATAAGCA--------------GA-GA-------------ACCGTAATGGAAGCGAAACA---TCCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------TT-C--------------------------------------GTTCCTTTC----CCGTGTTCCCCCTGTTCCG-----TTTCAATTATA----CAAATTTCGACCGTTTCTTTTGCC--TTTTACAGTTCCG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGTG-------------..	18	1	88.00	88	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	4	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	2	1	0	0	0	0	1	1	1	0	3	0	0	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	4	0	0	0	0	0	0	1	0	2	0	3	6	5	0	4	5	1	7	1	0	0	0	0	0	0	1	0	0	0	1	2	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGG..........................	22	1	73.00	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	4	0	0	0	0	0	0	1	0	0	0	3	1	9	1	4	6	5	7	1	0	0	0	1	0	0	0	0	2	4	2	3	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTG...........................	21	1	37.00	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	7	1	2	0	2	0	1	4	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGGTG........................	24	1	37.00	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	0	7	0	2	5	2	5	0	0	0	0	0	0	0	0	0	1	4	0	2	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGG.............................	19	1	30.00	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	2	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	0	0	2	0	2	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGGTGAA......................	26	1	28.00	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	1	0	0	3	0	4	0	1	3	0	5	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGTGAACGGAGTG-------------GA	19	1	20.00	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	3	0	4	0	1	1	4	2	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGGT.........................	23	1	19.00	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	1	2	0	2	0	0	1	0	4	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGTGGTGAACGGAG.................	20	1	19.00	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTG----TTCGTCGTCAGC...............................	19	1	17.00	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGGTGA.......................	25	1	15.00	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	1	0	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCG..............................	18	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	2	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGTG-------------GA	20	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGGTGAAC.....................	27	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGT............................	20	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGTG-------------G.	19	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	1	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGTGAACGGAGTG-------------G.	18	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGGTGGTGAACGGAGTG-------------GA	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----TTCGTCGTCAGCGGTGGTGAA......................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................A--------------GA-GA-------------ACCGTAATGGAAGCG........................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGTTG----TTCGTCGTCAGCG..............................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCAGCGGTGGTGAA......................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GAAT--AA-TG--------TGCGAGCGAGAGGGC--GG----TG---------CTA-----------------------------------AGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------TAGGA-------------ACCGTAATGGAAGCGAAACC---GCC------------GCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCATTC----C-G-------CGTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTCTGCC--TTTTACAGTTGTG-CGGCGC--GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGTG-------------GA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCAGCGGTGGTGAACGGAGTG-------------..	25	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTG...........................	21	1	1.00	1	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCAGCGGTGG..........................	15	1	1.00	1	0	0	0	0	0	0	1
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG----TTCGTCGTCAGCGGTGGTGAA......................	25	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGTGAACGGAGTG-------------G.	20	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGTG-------------..	18	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGTGAACGGAGTG-------------G.	18	1	1.00	1	0	0	0	0	1	0	0

droYak3

GAAT--AA-TG--------TGCGAGCGAGAGCGT--GG----TG---------CTCAGGCCATCTCGCTCTCG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA--------------TA-GA-------------ACCGTAATGGAAGCGAAACA---CCCACT--------CGCTCT-----------CT----T-----------------GCGCTCTCT------------------------------------------------GTTCCTTTC----CTCCGTTTCCCTTGTTCCA-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CG------GCACACACAGTTG----TTCGTCGTCAGCGGTGGTGAACGGAGCGGA---GCGGAGCGGA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGTGGTGAACGGAGCGGA---GC........	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TA-GA-------------ACCGTAATGGAAGCGAAACA---CC..............................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAACGGAGCGGA---GC........	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCAGCGGTGGTGAACGGAGC................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGTGGT.........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGAACGGAGCGGA---G.........	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGCGGA---GCGG......	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGAACGGAGCGGA---GC........	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGCGGA---GC........	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGTGAACGGAGCGG..............	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGTGGTGAACGGAGCG...............	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGAACGGAGCG...............	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTG----TTCGTCGTCAGCGGT............................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGCGGA---GCGGAGCG..	18	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCGGA---GCGGAGCGG.	18	7	0.29	2	0	2	0	0	0	0	0	0	0	0	0

droEug1

GAAT--AA-TG--------TGCGAGTAAGAGAAA--AAATAATA---------TTTAGGCTATCCCGCTTTAG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCGGTGAGC------GAA-AGA-------------ACCGTAATGGTAGCGAGACA---CCCACT--------CTCTCA-----------TT----TATGCTCCCTC--------------------------TCTACTCTCTGTCTCTCTTTTTACGTCTCTCTCCAAATGTTCTCTTC----TCGAATTG--CCTGTTTCA-----TGTCATT---------------------TTTCTTTTGCC--TTTTACAGTT------------------------G----TTCGACGTCAGTGGTGAAGAACGGAACG-------------GA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GAAT--AA-TG--------CGCGAGGGAGAGGGT--GGTCAGC----------CTCAGGCTGCTCCGCTCCGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCGCTGATAAGCGG--AGC------GAA-AGA-------------ACCGCGATGGAAGCGGAACA---CCCCCT------------CT--CT-------T-GCC-------GCTCGTC--CGCGCTCTCTCT------------------------------------------------GTTCCCTTC----CTGCGTTC--CCTGTTCCG-----TTCCGATT-TA----CAATTCTCGAACGCTTCTCTTGCC--TTTTACAGTTGTG-CG---------------------------ACGTCAGTGGTGGAGAACGGAACG-------------GA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GAAT--AA-TG--------TGCGAGTGAGAGGGG--GGATAGTG---------CTGAGGCCGTCTCGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCGGTGAGC------GAA-AGA-------------ACCGTAATGGAAGCGAAACA---CCCACT-CTCCATTCACTCTTTATTCACTCTC----------TATTCACACACTCTCTCTCTCG------------------------------------------------GTTCTTTTC----TCGCATTC--CCTGTTCCA-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CGACG---ACACACACAGTTG--------TCGGCAGTGGTGGTGAACGGAACG-------------GA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GAAT--AA-TG--------TGCGAGAGAGAAGGT--GGATA-C----------ATCAGACCATCTCGCTCTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA-----------------GA-------------ACCGTAATGGAAGCGAAACA---CTCTCT------------CT-----------CA-----------------CGCTCTCACTCTCT------G---TTCATTCTTT-CT--------------------------------------TTTCGTTC--CCTGTTCCG-----TTTCAAATATA----CAATT-TCGACCGTTTCTTTCG----TTTTACAGTTGCGGCG--------ACA-ACAGTTT----TTCGACGGCGCTGGCCGAGAGAGGAACA-------------GA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GAAT--AA-TG--------TGCGAGGAAGAGGTT--GGATAATG---------GTCAGGCCATCTCGCTTTGG-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCA-----------------GA-------------ACCGTAATGGAAGCGAAACACCAC----C--------CTCTCT-----------C-GAC-------ACTCTCT--CTCTCTCTCTCT------------------------------------------------GTTCTTTTT---CTAGCGTTC--CCTGTTCCG-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCC--TTTTACAGTTGTG-CGGTGCGACGACACACAGTTG----TTCGACGTCACTGGTGGAGAACGGAACA-------------AA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GAAT--TA-TG--------TGCGAGTGAGAGGGT--GGATAACG---------CTCCGTCCTTCTCGCTCTGC-----------------CAGGCG--CAACAAGCGA--------------------------------------TCACTGATAAGCGATGAGC------GGA-AGA-------------ACCGTAATGGAAGCGAAACA---CCCACT-CT-----CGCTCT-----------CC----T-----------------TCTCTCTCA------------------------------------------------GTTCTTTTC----TGGCGTTC--CCTGTTCCA-----TTTCAATTATA----CAATTTTCGACCGTTTCTTTTGCT--TTTTACAGTTGTG-CG--------ACACACAGTTG----TTCGACGTCAGTGGTGGAGAACGGAACG-------------GA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GAAT--AA-TG--------G----------------------A----------GTCAGGCCATCCCGCTCTGC----------------------------CCAGCGA--------------------------------------TCACTGATAAGCGGTGAGT------GAG-GCA-------------ACCGTTATGGAAGCGAGACA---CCCGCA--------ATCTCT--CTTT-----AG----T-----------ACGCTCTCTCTCTCT------------------------------------------------GTAATTG-T----CAGTGTTG--GCAGTTTCGATTTTTTTTAAATCTA----AAATTTTC----------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AATT--AA-CG--------GGAATGGGACCA--------GGGT----------CTAATGCCATCCCACTCTGGCCTGGCC------AGGAGAAGCG--CAACAAGCGA--------------------------------------TCACTGATAAGGGT--ACT--------GA-GAGTCTAGGTGA-GAG----------CACGAA--A---CCCACCACCCCACACACTCTCACTTTACTCTC----------ACTAC--ACACTCTCCCTCGCTATCACTCTCC--------------------------------------GCTCAGTCCGCCCGAGAGTGC--CCTGAC--------------------------GAATCGCCCGATTCTTTCGCT--TATTACAGTTGTGGCG------GCATTCTCATTTCGAGTTTC----------GTGGCGAGCGGACCGACGACCCGACATGGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGAGCGGACCGACGACC.........	21	1	3.00	3	1	2	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------GTGGCGAGCGGACCGACGACC.........	23	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------GTGGCGAGCGGACCGAC.............	18	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCGGACCGACGACCC........	19	1	1.00	1	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTTTC----------GTGGCGAGCGGAC.................	21	1	1.00	1	0	1	0	0	0	0

droBip1

GAGG--TA--C--------TGCGAGTAACGGGAC--CGAGGCCGCCCTCGGGGCTAATGCCATCCCACTCTCT---GGCCAAAAGAAGAAGAAGCG--CAACAAGCGA--------------------------------------TCACTGATAAGGGT--ACTACTAGGGAGA-GAG-CTAGGTGA-GAGCGGCTATGCCAGCGAAACCC-AC----CACCCCACACACTCTCACTACACACTC---------------------TCTCCCTCGCTATCACTCTCC--------------------------------------GCTCATTCC----ACGAGTGC--CCTGAC--------------------------GAATCGCCCGATTCTTTCGCT--TATTACAGTTGTGGCG------GCATTCTCATTTCGAGTTT----------CGTAGCGACCGGACCG----CC-------CG	Size	Hit Count	Total Norm	Total
No Reads

dp5

GAAAATAA-TAAAGAGAGGTGGAAGTGAGAGAAA--------TG---------C--------TTTCGCTCTCG-----------------CGATC---------------GACGACGCCGCAGC------------------GCTGCCTCTGATAAGAG-----------------GG-------------AACAAAGTGGAATCGAAACC--AC----C--------TTCTCT-----------CTGACGCAGAATACTCG--------------------------TACACTCTCT-TG--------------------------T------------TTCATTT--GCCGTTCCG-----TTTCAATTATACCTACAATTT-----CGTTTCTCTTTCTGTCTTTACAGCT----CG------ACTCATTCAATT------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...............................................................TTCGCTCTCG-----------------CGATC---------------GACGACGCCGCA............................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GAAAATAA-TAAAGAGAGGTGGAAGTGAGAGAAA--------TG---------C--------TTTCGCTCTCG-----------------CGATC---------------GACGACGCCGCAGC------------------GCTGCCTCTGATAAGAG-----------------GG-------------AACAAAGTGGAATCGAAACC--AC----C--------TTCTCT-----------CTGACGCAGAATACTCG--------------------------TACACTCTCT-TG--------------------------T------------TTCATTT--GCCGTTCCG-----TTTCAATTATACCTACAATTT-----CGTTTCTCTTTCTGTCTTTACAGCT----CG------ACTCATTCAATT------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

GAGT--GAGTG--------AGTGAGTGAGAGGTT--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
No Reads

droGri2

GAAT--C--TA--------TGCGATGG-----TT--GCCTAG------------TAGTGCTATCTCGCTCTGC-------------GA--CGGGCGCTCAACAAGAGATCGGCGACGTCGCCGCTGACGTCGACTGCGCGTCGC--TCGCTGATAAGCA--------------TGTGAG-CCATATGGGGGCACAAAGTGAGAATGAAACG---TGCGCC--------CGCTTC---CAA-----AT----T-----------------GCGCTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_10441

2r:9893296-9893445 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-13.0	-12.8	-12.8