ID:

dsi_10298

 Coordinate:

3r:24092756-24093029 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.8 -8.7 -7.8

Flybase annnotation

exon [3r_24093075_24094598_+]; CDS [3r_24093075_24094598_+]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#####
CCCACATATATGTCGGATGTATATGGGCGCCAAAAAGAAACAGTCTTTGGTCGAACGGCGACCATTGATACAATTAGTAAGTCAAGTCGTCGGGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGATTGTTCCGATCCGATCTGATCCGAATAGAACCAATACGAAATAATCCGATGTTGCGCAGGTTTCCTTTGGGGCCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGAACCCAACGCAATTCGAGAGAGCCGCCAGTGCAATATTAGATAATCGAGTAATTTTTCCCCTTGGGATCCAGAAAGAAAACTGACAATCAACCGGAGAGTTCACCACACCCCTTGGAATGTC
*************************************************************************************************************************.....((....((.(((((((((........))))).))))))...........))***************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M023
head
 O001
Testis
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
................................................................................................................................AGCGTGAGGTCGATGGTTC................................................................................................................................................................................................................................... 19 3 8 1.25 10 0 0 2 0 0 8 0 0 0 0
.....................................................................................................................................................ATCCGATCTGATCCGAATAGAACCAATA..................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................GACATTGAGCGTGCGATCGATT....................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
CCCACATATATGTCGGATGTATATGGGC.......................................................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
..........................................GTCTCTGGTCGAACGGCGACCAT..................................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................TAGTCGAACCCAACGCAATTCGAGAGA..................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................AATTAGTAAGTCAAGTCGTCGGG........................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................TTGTTCCGATCCGATCTG....................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................TTGCCAAAATGCCAATGAGACATTGA........................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................ATGAGACATTGACATTGAGCGTGC............................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...........................................TCTATGGTCGAGCGGCGA......................................................................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
..........................................GTCTTTTTTCGAACGGCG.......................................................................................................................................................................................................................................................................................................................... 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......ATATGTCGGCTGTATAGGAGC.......................................................................................................................................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................GATCGCTTGTTCCGA................................................................................................................................................................................................................................ 15 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................TGCTTTGGCGCCAACATTGGCTGC................................................................................................................................................... 24 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................CGCAGGTGTCCTAAGGGG................................................................................................................................................................. 18 3 13 0.23 3 0 0 0 1 0 0 0 0 0 2
.................................................................................................................................................TCCGATCCGATCTGATCC................................................................................................................................................................................................................... 18 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0
..............................................................................TAGTCAACTCGTCGGGC....................................................................................................................................................................................................................................................................................... 17 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTCGCGAGGCTTGACC................................................................................................................................... 16 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0
................................................................................................................................AGCGTGCGATTGGTTGT..................................................................................................................................................................................................................................... 17 2 17 0.06 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................ACCCAGCGCAATTGGATAG...................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................................................TCGTAGTTCGAGAGAGCC.................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................TCATTGACATTGAGC................................................................................................................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................TCAGACATTGACATT....................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GGGTGTATATACAGCCTACATATACCCGCGGTTTTTCTTTGTCAGAAACCAGCTTGCCGCTGGTAACTATGTTAATCATTCAGTTCAGCAGCCCGTAAACGGTTTTACGGTTACTCTGTAACTGTAACTCGCACGCTAGCTAACAAGGCTAGGCTAGACTAGGCTTATCTTGGTTATGCTTTATTAGGCTACAACGCGTCCAAAGGAAACCCCGGTTGTAACCGTCGGAGCGCTCAGAACGGGTCGATCAGCTTGGGTTGCGTTAAGCTCTCTCGGCGGTCACGTTATAATCTATTAGCTCATTAAAAAGGGGAACCCTAGGTCTTTCTTTTGACTGTTAGTTGGCCTCTCAAGTGGTGTGGGGAACCTTACAG
*****************************************************************************************************************************************************************************************************.....((....((.(((((((((........))))).))))))...........))************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
............................................................................................................................................................................................................................................................TTGTGTTGCGATAAGCTCT....................................................................................................... 19 2 2 4.50 9 8 0 0 1 0 0 0 0
........................................................CCGCTGGTAACTATGTTAA........................................................................................................................................................................................................................................................................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TCAGAAGGGGTCGATCAGC.......................................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................AAGGTTAGCCTAGACTTGG................................................................................................................................................................................................................... 19 3 20 0.65 13 3 0 7 0 1 0 2 0
...........................................................................................................................................................................................................................................................CAAGGGTTGCGATAAGCTCT....................................................................................................... 20 3 6 0.17 1 0 0 1 0 0 0 0 0
.........................CTGCGGTCTTTCTTTGTC........................................................................................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................TTCAGTTGCGATAAGCTCT....................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TTTTGACTGTTAGTC............................... 15 1 19 0.05 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................TCACGGCGCTCACGTTA....................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................................TTGCGATAAGCTCTTTTGG.................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................TGGTTATGCTTTAAT............................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................................................................................GGCCTCTAAAGTGGTGAC............. 18 3 20 0.05 1 0 0 0 0 0 0 0 1
............................CGGTCTTTCTTTGTC........................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:24092706-24093079 + dsi_10298 CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGAAA------------------CA----GTC-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAAATAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGAG-----AG------------------CCGCCAGTGCAATATTAGATAATCGAGTAA-T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---TTCAC------CAC---A-------CCCCTTGGA-------ATGTC
droSec2 scaffold_4:3594446-3594819 + CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGAAA------------------CA----GTC-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAAATAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------TGGG-----AG------------------CCGCCAGTGCAATATTAGATAATCGAGTAA-T------------------T-----T----------TTC-------------CTCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---TTCAC------CAC---A-------CCCCTTGGA-------ATGTC
dm3 chr3R:24731161-24731534 + CC-----CATATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGAAG------------------CA----GTC-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAAATAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AG------------------CCGCCAGTGCAATATTAGATAATCGAGTAA-T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAG-------CTGACA--------------------------------------AT---CAA---CCGAA--AAG---TTCAC------CAC---A-------CCCCTTGGA-------ATGTC
droEre2 scaffold_4820:3305940-3306312 - CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------CA----GTC-TTTT--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAACTAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------CCGCCAGTGCAATATTAGATAATCGAGTAC-T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---ATCAC------CAC---A-------CCCATTGGA-------ATGTC
droYak3 3R:21770379-21770757 - CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGGAA------------------CAGTCAGTA-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAACTAATACGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------CCGCCAGTGCATTATTAGATAATCGAGTAC-T------------------T-----T---------TTTC-------------CCCTTGGG-------------ATC------C---AGCAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---ATTAC------CCC----------ACCCATTGGA-------ATGTC
droEug1 scf7180000409787:850763-851140 - CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGGTA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAGCTGATCCGAT-T----AT---GCGCAGGTTTCCTTTGGGG--CCACTATTGGCAGCCTCGAGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------TCGCCAGTGCAATATTAGATAATCGAGTAT-T------------------T-----T---------TTTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AG---GTA---CCGGA--GAG---ATCAC------CAT---C---CCCAGCCTACGGA-------ATGTC
droBia1 scf7180000302075:2020306-2020700 - -------------TGTGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-AAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACGACCGACCAT-TGGTACTTGGTAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTGATACG-----TTCCGAATAGAACTGAATACGAACTGATCCGAT-T----TG---GCGCAGGTTTCCTTTGGGG--CCAGCGTTGACAGCCTCGCGAGTCTCGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------ACGCCAGTGCAATATTAGATAATCGAGTAC-T------------------T-----TT--------TTTT-------------CCCTTGGG-------------ATC------C---AGAAAG-ATA---GAAAA-------CTGACA--------------------------------------AG---GTT---TTGGAGAGAG---ATCAC------CACATCC---CCCAGCCCACGGA-------ATGTC
droTak1 scf7180000415700:296660-297058 + --------------ATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGCTACG-AACAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCCG-----ATC-----------------------------------------------------GATCGATCGATTGTTCTTCGATTGTTCCATTCCGATTCGAACC-----------GATCGG----------ATCCGAATAGAAC-----------TGCTCCGAT-T----TT-A-GTGCAGGTTTCCTTTGGGG--CCACCATCGACAGCCTCGCGAGTCTCGCCGAGCTATTCGA---------AGTCAACGCAATTCG-----------AGGG-----AA------------------TCGCCAGTGAAATATTAGATAATCGAGTAC-T------------------T-----T---------TCTTCT-------TGTACACTTGGG------------CATC------C---AGAAAATACA---GAAAA--A----CTAAAC-------------------------------------AGC---GAAT--TCGGAGGGAG---ATCC----------------------------CA-------ATGTC
droEle1 scf7180000491261:1302751-1303151 + CTACAACCACATATAAGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGGTT-----CAATTAGTAAGTCAAGTCGCCGCCG-------------GCCATTTGCCAAAATCCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGT-----------TCCTATCCGATCC-----------GATCCA----------ATCCGAACAGAAA-CAATACGAACTGATCCGAT-C----TA---GTGCAGGTTTCCTTTGCGG--CCAGCACTGTCAGCCGCGCGAGTCTCGCCCAGCTAGTCGA---------ACCCAAAGCAATTCG-----------CGGG-----AG------------------TCGCCAGTGCATTGTTAGATAACCGAGTAC-T------------------T-----T---------TTTC-------------CCACTGGG-------------ACC------C---AGAAAG--------CACA-------CTGACT--------------------------------------AG---GAC---ACGGA--GACACAATCAC------CAA-TCA---CCCAGCCTGCGGA-------ATGTC
droRho1 scf7180000780007:329220-329596 - C------CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAA-GAA------------------AA----GTC-TATG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TAATA-----CAATTAGTAAGTCAAGTC---GCCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAACTGATCCGAT-T----TT---GTGCAGGTTTCCTTTGCCG--CCAGCACTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCAA---------ACCCAAAGCAATTCG-----------AGGG-----AG------------------ACGCCAGTGCAATATTAGATAATCGAGTAC-T------------------T-----T---------TTTC-------------CCCTTGGG-------------ACC------A---AGAAAG--------AAAA-------CTGACC--------------------------------------AG---GAA---CCGGA--GAA---ATCAC------CAA---C---CCCAGCCTACGGA-------ATGTC
droFic1 scf7180000454073:3617855-3618244 - CC-----CCCGC--------------------------------------------------------------------A-------------------------GAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGCTG-----CAATTAGTAAGTCAAGTC---GCCG-------------GCCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA---------------------------------------------------------------TCGATCGATTGTTCCCA---------------------TCC------GATCCGATCTGATCCGATCTAATCCGAACATAGC-TAATACGACCAGATCCGAT-T----TG---GCGCAGGTTTCCTCTGCGG--CCAGCGCTGGCAGCCTCGCGAGTCTCGCCCAGCCATTCGA---------ACGCATCGCAATTCG-----------AG-G-----AG------------------TCGCCAGTGCGATATTAGATAACCGAGTAC-T------------------T-----TTCA------TTTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAC-------CTGACC--------------------------------------GC---GAA---CCGGA--GGG---ACCGCCCACCGCCCATCCACCACCATCCAACGGA-------ATGTC
droKik1 scf7180000302639:2658956-2659333 - ------------ATATATCGGATG------------------------TAT------------------GT-GGGCGCCAA-------------------------AGG---A------------------AA----GTC-TTT-------------------------------------------------------------------------------------------------------CAATTAGTAAGTCGCGTC---GCCG-------------GACATTTGCCAAAATGCCAATGAGACATTGACATTGAGGGTGCGATCGA---------------------------------------------------------------TCGATCGATCGTTCCGA---------------------AAC-----CGACCCGATCCG----------GTCCGAGTAGCTG-CACTGCGGCGTGGACCTAT------TT---GCGCAGGTTTCCTTTGCAA--CCAGCGCTGGCAGCCTCGCGAGTCTCGCCCAGCAAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AG------------------TCGCCAGTGCAAGATTAGATAACATTGTAC-T------------------T-----T----------TTT-------------CCCTTGGT-------------ATC------C---AGAAGG--------AAAA-------CTGACCACAACCAATCACCAC------------GACC-------AC---GAA---TCGGA--GAG---ATTAC------CGC---C---CCCAGACAACGGA-------ATGTC
droAna3 scaffold_13340:7858887-7859276 - CC-----T-TATAGGTGCCTTAT-------------ATTATGAA--CATGT------------------GT-GGGCGCCAA--------------------------AG-GAA------------------AA----GTC-TCGG---------------------------------------------------------TA---------GTCTAT---TGACG----ACCATTTGGTT-----TAATTAGTAAGTCAAGTC---GTCG------------AGGCAGTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TT----CGA---------------------TCC-----------GATTGG----------ACCCGAATCGATC-----------CGGTCCGAT-------G---GCGCAGGTTTCCTTTGCCA--CCAATTCTGGCAGCCTCGCGAGTCTCGCCCAGCCCGTCAA---------ACCCAACGCAATTCG-----------AGGC-----AA------------------AGACCAGTGCACGATTAGATAACCCATTGA-C------------------T----TT---------TTCC-------------CCCTTGGG-------------ATC------C---AGAAAA--------AAAAACATTATCCAGCG-----------------------------------AGAGTAGAGAGTGAGAGGA--AC----------------GG---C---CGAAGATCACGGAAGAGATCATGTC
droBip1 scf7180000396708:990584-990980 + CA-----TACATATGTACCTTATAGAGATGCCTTATACTATGAA--TATGT------------------GT-GGGCGCCAA--------------------------AG-GAA------------------AA----GTC-T---------------------------------------------------------------------------AT---TGACG----ACCATTTGGGT-----TAATCAGTAAGTCAAGTC---GGCG------------AGGCAGTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------T----CCGA---------------------TTGGACCC------G----A----------ATCCGATTGGATC-----------CGGTCCGAT-------G---GCGCAGGTTTCCTTTGCCA--CCAGTTCTGGCAGCCTCGCGAGTCTCACCCAGCCCGTCAA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------CGACCAGTGCACGATTAGATAACCCATTGC-C------------------T----TT---------TTCC-------------CCCTTGGG-------------ATCCATATCC---AGAAAA--------AAAAGCATTATCCAGAG-------------------------------------AGT---GAGTGAGGGGA--GAG---ATCAC-------------------AGATCACGGAAGAGATCATGTC
dp5 2:13951451-13951905 - TA-----TACAAATAAATCGGATGTAG----------------ACGTATAT------------------ATGGGGCGCCAA-------------------------GAG-GGACGCAGGGACACGGCGATCCG----ATCTTTTG--------------------------------------------------------------------GTCGATCACCGACG----ATCAT-TGGAT-----CAATTAATAAGTCAAGTC---GAAA-------------GGCGTTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGTACGA-----------------------------------------------------------------------------GATCCGA---------------------TTC-----------AATCCG----------ATTCGATT----------------CGATTCGATTGTCGAG-CAGCCACAGGTTTCCTTTGTGG--CCAGCGCCAGCTGCCTCGCGAGTCTCGTCCAAGTAGTCGATCGAACGCTATCCAACACAGTCCG-----------TGGG-----GA-AACAGCCCGACCG---ACCGCCAGTGCAAGATTAGGTAACAGAAGAA-T------------------T-----CCCATTCTTTTTTTTTGATACGCTGTACA--------------------------CCC---G-A--------------------AG--------AAGCAGCCACCGCCAGAGCACACTGGACCAAGA---AT---CAA---GCAAA--GAA---AGCGC------CAC---C--GCCCAGGCAGAAAA-------ATGTC
droPer2 scaffold_0:6491873-6492310 + GA-----CGTATATATG-------------------------------------------------------GGGCGCCAA-------------------------GAG-GGACGCAGGAACACGGCGATGCG----ATCTTTTG--------------------------------------------------------------------GTCGATCACCGACG----ATCAT-TGGAT-----CAATTAATAAGTCAAGTC---GAAA-------------GGCGTTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGTACGA-----------------------------------------------------------------------------GATCCGA---------------------TTC-----------AATCCG----------ATTCGATTCGATT-----------CGATTCGATTGTCGAG-CAGCCGCAGGTTTCCTTTGTGG--CCAGCGCCAGCTGCCTCGCGAGTCTCGTCCAAGTAGTCGATCGAACGCTATCCAACGCAGTCCG-----------TGGG-----AA--ACAGTCCGACCG---ACCGCCAGTGCAAGATTAGGTAACAGAAGAA-T------------------T-----CCCAATCTTTTTTATTGATTCGCTGTACA--------------------------CCC---G-A--------------------AG--------AAGCAGCCACCGCCAGAGCACACTGGACCAAGA---AT---CAA---GCAAA--GAA---AGCGC------CAC---C--CCCCAGGCAGAAGA-------ATGTC
droWil2 scf2_1100000004921:786531-786909 - CA-----ATAGTT--TATAATATA------------------------TAT------------------CT-TTGCGTTATTGAAACAATCAATCGAAGGAAGG--AAG-CAA------------------AA----GTC-TTTT--------------------------------------------------------------------GTCGAT---CAA-------------------------TT---------AATC---GCAA-------------TGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTACGATCGG-----------------------------------------------------------------------CTCGATCCA---------------------TCC-----------AACCCG----------ACATGGTTATAGA-CAAACCG------TCA----G----GC---AGGCAGGTTTCTTTTTA-GTTAGAACGTTAGAGGCGACACGAGTCTCGCCAAGTACACCAA---------ACCCAACGCAATTCG-----------ACGA-----AAGAATTGTCTCATTAGAAATCG-AAATAC-ATATTAGATAACCAACAAAAAATA-CGGTTTCTTTAGGTTCGTTTT-----TTGTTTTTTT-----------AGTTTAGT-------------TT---------------------------------------------------------------------------------------------------AG---TGAGC------AAA-TCC---T------CCAGCA-------ATGTC
droVir3 scaffold_13047:13937864-13938356 + TG-----TACATATATATAT---A--G----------------A--TATATGCTTGTACTTGTATCGCATC-GGGCGCCAA---------TAA--GC---AGGGTAGAG-GAA------------------AA----GTG-TTTT-----------------TCCTTTTCGATTCTGTTGTTGTGGTTGTTGTAGTTGTAGTTAGTCTTGTTGTTGGCA---ACT--------CAC-CG-AA-----CAATTAATAAGTCAAATC---GAAACTAAACGACTAAATGCATTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGCCT---TGCTTGCCCCACAACCTA------------------------------------------------CCGA----TC-CTCCAA--T---CCAACACCATATCGACGA-----------TCTTCA----------ATCTTCACAGGG-------------------CT-A----TC---GAGCAGGTTTC-TTTATAG--CAAACGCCAGCAGCGTCGCGAGTCGCGTCGAGCAAGTCGA---------ACCCAACGCAATTCA----CATTGGGATTG-----AT------------------ACACCAGTGAAAAGTTAGATAACAGATTCAAGATA-C-------------TC-----GC----------------------------AGTTATCATATAAATATATC------T---ATAAA-TATATATACA--CAT--ATAAA-------------------------------------TATCGC---GTATAT--TGG-------------------------------CAG---CCGCG-------ATGTC
droMoj3 scaffold_6540:26147895-26148283 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTAATAAGTCAAATC---GAAACGAAACGACTAATTGCATTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGTACACCCTG---T-CCCCCCAG-ACCAAA-CCCAGACCCACCGTTCGTACTGTGGCACCCAACCCCGAGAAATGT---------ATCGA--------------------GCGA-----------TCTTCA----------ATCTTCACAGGG-------------------CT-A----TC---GAGCAGGTTTC-TTTATTG--CAAACGCCAGCAGAGTCGCGAGTCGCGTCGAGCAAGTCGA---------ACCTAACGCAATTCATTCACATTAGGTTTGATGATAT------------------AGCCCAGTGAAAAGTTAGATAACAGATTCA-GATAGT-------------TC-----GC----------------------------ACCACTCATATAAATATATA------TCACACACA-TATATATATA--TAT--ATATA-------------------------------------TATCGC---GATTAC--TGG-------------------------------CAGC-CCCGCG-------ATGTC
droGri2 scaffold_14830:6018581-6019039 - GA-----CATACATATATCTGCT-------------------------------TGTACTTGTAGCGCGAT-GGGCGCCAT---------TGA---C---ATGG--GAG-GAA------------------AA----GTG-TTTTTTTTTATTAGTTTGTTTTCCTTTTGGCTT--------------------------------TTTGTTGTTGGCA---AGTCG--------C-TG-AT-----CAATTAATAAGCCACATC---GAAACAAAACGACAAATAGCATTTGCCAAAATGCCAATGAGGTATTGACATTGAGAGTCACTTCCT-----CCCTAACC-ACCGAATCA----------------------------------------CGGATCTATCGTATCGA---------------------CGA-----------TCTTCG----------ATCTTAACAGGGC-TA--------------TCT-A----TC---GAGCAGGTTTC-TTTATTG--CAAACGCCAGCAGCTTCGCGAGTCGCGTCGAGCAAGTCGA---------ACCCAACGCAATTAA----CATTTGAAT--ATTATAT------------------TCGCCAGTGAAAAGTTAGATAACAGATTCA-CACCG-------------------------------ATA-------------CCCTACCA---------GTCCGTC------C---ATAAA-CCCA---ACACA--A----ATA-------------------------------------TATCGC---GTATTC--TGC-------------------------------AATCGACCGCG-------ATGTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGAAA------------------CA----GTC-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAAATAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGAG-----AG------------------CCGCCAGTGCAATATTAGATAATCGAGTAA-T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---TTCAC------CAC---A-------CCCCTTGGA-------ATGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATA......................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................GACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGA---------ACCCAACGCAATTCG-----------AGAG-----A...................................................................................................................................................................................................................................................................................2711.00100000000001000000
........................................................................................................................................................................................................................................................AATTAGTAAGTCAAGTC---GTCG-------------GG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCGA---------------------TCC-----------GATCTG----------.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
..................................................................................................................................................................................................................................................................................................TTGCCAAAATGCCAATGAGACATTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
................................................................................................................................................................................................................................................................................................................ATGAGACATTGACATTGAGCGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCCGA---------------------TCC-----------GATCTG----------ATCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1860.17100010000000000000
droSec2
CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGAAA------------------CA----GTC-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAAATAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------TGGG-----AG------------------CCGCCAGTGCAATATTAGATAATCGAGTAA-T------------------T-----T----------TTC-------------CTCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---TTCAC------CAC---A-------CCCCTTGGA-------ATGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG-----------TGGG-----AG------------------CCGCCAGTGCAATAT.................................................................................................................................................................................................................................................2511.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---CAA---CCGGA--GAG---TTCAC------CAC---A-------CC...................2411.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAATTCG-----------TGGG-----AG------------------C...............................................................................................................................................................................................................................................................1811.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACGCAATTCG-----------TGGG-----AG------------------................................................................................................................................................................................................................................................................2011.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAG--------AAAA-------CTGACA--------------------------------------AT---C................................................................1811.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAAATAATCCGAT-G----TT---GCGCAG.......................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
dm3
CC-----CATATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGAAG------------------CA----GTC-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAAATAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AG------------------CCGCCAGTGCAATATTAGATAATCGAGTAA-T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAG-------CTGACA--------------------------------------AT---CAA---CCGAA--AAG---TTCAC------CAC---A-------CCCCTTGGA-------ATGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAG-------C.................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AAGTCAAGTC---GTCG-------------GGCATTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCTTTGGGG--CCAACATTGGCAGC..........................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCCGA---------------------TCC-----------GATCTG----------ATC......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGAGTCTTGCCCAGCTAGTCGA---------.......................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATAATCGAGTAA-T------------------T-----........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AT------------------AT-GGGCGCCAA-------------------------AAAGAAG------------------CA----GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCGCGAGTCTTGCCCA.........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTTGGGG--CCAACATTGGCAG...........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................AA-------------------------AAAGAAG------------------CA----GTC-TTTG--------------------------------------------------------------------GTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTG----------ATCCGAATAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------C---AGAAAG--------AAAG-------CTGACA--------------------------------------......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------CTGACA--------------------------------------AT---CAA---CCGAA--AAG---TTC...........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAGCTAGTCGA---------ACC....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGG--CCAACATTGGCAGCC.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTGCAATATTAGATAATCGAGTAA-.................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATAATCGAGTAA-T------------------T-----........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AAGTCAAGTC---GTCG-------------GGCATTTGCCAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTAGTCGA---------ACCCAACGCA.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------CCGCCAGTGCAATATTAGATAA..........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG-----------AGGG-----AG------------------CCGCCAGTGCA.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAATAATCCGAT-G----TT---G............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAATTCG-----------AGGG-----AG------------------C...............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............ATATGTCGGATG------------------------TAT------------------AT-GGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AAGTCAAGTC---GTCG-------------GGCATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................GAA---CGGCG----ACCAT-TGATA-----C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AA...........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCG-----------AGGG-----AG------------------CCGCCAGTGCA.....................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATATGTCGGATG------------------------TAT------------------AT-GGGCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAGTC---GTCG-------------GGCATTTGCCAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATTGACATTGAGCGTGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAGCTAGTCGA---------ACCC...................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------ATC------C---AGAAAG--------AAAG-------CTGACA--------------------------------------AT---CA...............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGA........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGAAG------------------CA----GTC-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAATTCG-----------AGGG-----AG------------------CCGC............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AGTC---GTCG-------------GGCATTTGCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------AAAG-------CTGACA--------------------------------------AT---CAA---CC.........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------AAAG-------CTGACA--------------------------------------AT---CAA---CCGAA--AAG---TTCA..........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGAATAGAAC-CAATACGAA..................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTGGCAGCCTCGCGAGG.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CCAAAATGCCAATGAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGCAATTCG-----------AGGG-----A...................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATAATCGAGTAA-T------------------T-----T----------TTC-------------CCCT.........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC------C---AGAAAG--------AAAG-------CTGACA--------------------------------------AT---CAA---CCGA.......................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAGCTAGTCGA---------ACCCAACG...............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTGCAATATTAGATAATCGAG.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAATTCG-----------AGGG-----AG------------------CC..............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ATGAGACATTGACATTGAGCGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................AAAGAAG------------------CA----GTC-TTTG--------------------------------------------------------------------GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------AGGG-----AG------------------CCGCCAGTGCAA....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------A............................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................T------------------AT-GGGCGCCAA-------------------------AAAGACC------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droEre2
CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------CA----GTC-TTTT--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAACTAATCCGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------CCGCCAGTGCAATATTAGATAATCGAGTAC-T------------------T-----T----------TTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---ATCAC------CAC---A-------CCCATTGGA-------ATGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---ATCAC------...................................2611.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-CAATACGAACTAATCCGAT-G----T.................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCG-----------AGGG-----AA------------------CCGCCA..........................................................................................................................................................................................................................................................1811.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAATTCG-----------AGGG-----AA------------------CCGCCAGTGCAAT...................................................................................................................................................................................................................................................2911.0010000100
droYak3
CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAAGGAA------------------CAGTCAGTA-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCAT-TGATA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAACTAATACGAT-G----TT---GCGCAGGTTTCCTTTGGGG--CCAACATTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------CCGCCAGTGCATTATTAGATAATCGAGTAC-T------------------T-----T---------TTTC-------------CCCTTGGG-------------ATC------C---AGCAAG--------AAAA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---ATTAC------CCC----------ACCCATTGGA-------ATGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................A-------------------------AAAGGAA------------------CAGTCAGTA-TTTG--------------------------------------------------------------------GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201000010000
...........................................................................................................................................A-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------CTGACA--------------------------------------AT---CAA---CCGGA--GAG---AT............................................2311.00100000010000
.....................................................................................................................................GTCAGTA-TTTG--------------------------------------------------------------------GTCGAA---CGGCG----ACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................CAATTAGTAAGTCAAGTC---GTCG-------------GGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------CCGCCA..........................................................................................................................................................................................................................................................3011.00100000010000
..........................................................................................................................................................................................................................................................................................................................GACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
CC-----CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGGTA-----CAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAGCTGATCCGAT-T----AT---GCGCAGGTTTCCTTTGGGG--CCACTATTGGCAGCCTCGAGAGTCTTGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------TCGCCAGTGCAATATTAGATAATCGAGTAT-T------------------T-----T---------TTTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAA-------CTGACA--------------------------------------AG---GTA---CCGGA--GAG---ATCAC------CAT---C---CCCAGCCTACGGA-------ATGTCSizeHit CountTotal NormTotal
No Reads
droBia1
-------------TGTGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-AAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACGACCGACCAT-TGGTACTTGGTAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTGATACG-----TTCCGAATAGAACTGAATACGAACTGATCCGAT-T----TG---GCGCAGGTTTCCTTTGGGG--CCAGCGTTGACAGCCTCGCGAGTCTCGCCCAGCTAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------ACGCCAGTGCAATATTAGATAATCGAGTAC-T------------------T-----TT--------TTTT-------------CCCTTGGG-------------ATC------C---AGAAAG-ATA---GAAAA-------CTGACA--------------------------------------AG---GTT---TTGGAGAGAG---ATCAC------CACATCC---CCCAGCCCACGGA-------ATGTCSizeHit CountTotal NormTotal
No Reads
droTak1
--------------ATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGCTACG-AACAATTAGTAAGTCAAGTC---GTCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCCG-----ATC-----------------------------------------------------GATCGATCGATTGTTCTTCGATTGTTCCATTCCGATTCGAACC-----------GATCGG----------ATCCGAATAGAAC-----------TGCTCCGAT-T----TT-A-GTGCAGGTTTCCTTTGGGG--CCACCATCGACAGCCTCGCGAGTCTCGCCGAGCTATTCGA---------AGTCAACGCAATTCG-----------AGGG-----AA------------------TCGCCAGTGAAATATTAGATAATCGAGTAC-T------------------T-----T---------TCTTCT-------TGTACACTTGGG------------CATC------C---AGAAAATACA---GAAAA--A----CTAAAC-------------------------------------AGC---GAAT--TCGGAGGGAG---ATCC----------------------------CA-------ATGTCSizeHit CountTotal NormTotal
No Reads
droEle1
CTACAACCACATATAAGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGGTT-----CAATTAGTAAGTCAAGTCGCCGCCG-------------GCCATTTGCCAAAATCCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGT-----------TCCTATCCGATCC-----------GATCCA----------ATCCGAACAGAAA-CAATACGAACTGATCCGAT-C----TA---GTGCAGGTTTCCTTTGCGG--CCAGCACTGTCAGCCGCGCGAGTCTCGCCCAGCTAGTCGA---------ACCCAAAGCAATTCG-----------CGGG-----AG------------------TCGCCAGTGCATTGTTAGATAACCGAGTAC-T------------------T-----T---------TTTC-------------CCACTGGG-------------ACC------C---AGAAAG--------CACA-------CTGACT--------------------------------------AG---GAC---ACGGA--GACACAATCAC------CAA-TCA---CCCAGCCTGCGGA-------ATGTCSizeHit CountTotal NormTotal
No Reads
droRho1
C------CACATATATGTCGGATG------------------------TAT------------------AT-GGGCGCCAA-------------------------AAA-GAA------------------AA----GTC-TATG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TAATA-----CAATTAGTAAGTCAAGTC---GCCG-------------GGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TTGTTCCGA---------------------TCC-----------GATCTG----------ATCCGAATAGAAC-CAATACGAACTGATCCGAT-T----TT---GTGCAGGTTTCCTTTGCCG--CCAGCACTGGCAGCCTCGCGAGTCTTGCCCAGCTAGTCAA---------ACCCAAAGCAATTCG-----------AGGG-----AG------------------ACGCCAGTGCAATATTAGATAATCGAGTAC-T------------------T-----T---------TTTC-------------CCCTTGGG-------------ACC------A---AGAAAG--------AAAA-------CTGACC--------------------------------------AG---GAA---CCGGA--GAA---ATCAC------CAA---C---CCCAGCCTACGGA-------ATGTCSizeHit CountTotal NormTotal
No Reads
droFic1
CC-----CCCGC--------------------------------------------------------------------A-------------------------GAG-GAA------------------AA----GTC-TTTG--------------------------------------------------------------------GTCGAA---TGACG----ACCAT-TGCTG-----CAATTAGTAAGTCAAGTC---GCCG-------------GCCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA---------------------------------------------------------------TCGATCGATTGTTCCCA---------------------TCC------GATCCGATCTGATCCGATCTAATCCGAACATAGC-TAATACGACCAGATCCGAT-T----TG---GCGCAGGTTTCCTCTGCGG--CCAGCGCTGGCAGCCTCGCGAGTCTCGCCCAGCCATTCGA---------ACGCATCGCAATTCG-----------AG-G-----AG------------------TCGCCAGTGCGATATTAGATAACCGAGTAC-T------------------T-----TTCA------TTTC-------------CCCTTGGG-------------ATC------C---AGAAAG--------AAAC-------CTGACC--------------------------------------GC---GAA---CCGGA--GGG---ACCGCCCACCGCCCATCCACCACCATCCAACGGA-------ATGTCSizeHit CountTotal NormTotal
No Reads
droKik1
------------ATATATCGGATG------------------------TAT------------------GT-GGGCGCCAA-------------------------AGG---A------------------AA----GTC-TTT-------------------------------------------------------------------------------------------------------CAATTAGTAAGTCGCGTC---GCCG-------------GACATTTGCCAAAATGCCAATGAGACATTGACATTGAGGGTGCGATCGA---------------------------------------------------------------TCGATCGATCGTTCCGA---------------------AAC-----CGACCCGATCCG----------GTCCGAGTAGCTG-CACTGCGGCGTGGACCTAT------TT---GCGCAGGTTTCCTTTGCAA--CCAGCGCTGGCAGCCTCGCGAGTCTCGCCCAGCAAGTCGA---------ACCCAACGCAATTCG-----------AGGG-----AG------------------TCGCCAGTGCAAGATTAGATAACATTGTAC-T------------------T-----T----------TTT-------------CCCTTGGT-------------ATC------C---AGAAGG--------AAAA-------CTGACCACAACCAATCACCAC------------GACC-------AC---GAA---TCGGA--GAG---ATTAC------CGC---C---CCCAGACAACGGA-------ATGTCSizeHit CountTotal NormTotal
No Reads
droAna3
CC-----T-TATAGGTGCCTTAT-------------ATTATGAA--CATGT------------------GT-GGGCGCCAA--------------------------AG-GAA------------------AA----GTC-TCGG---------------------------------------------------------TA---------GTCTAT---TGACG----ACCATTTGGTT-----TAATTAGTAAGTCAAGTC---GTCG------------AGGCAGTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------TT----CGA---------------------TCC-----------GATTGG----------ACCCGAATCGATC-----------CGGTCCGAT-------G---GCGCAGGTTTCCTTTGCCA--CCAATTCTGGCAGCCTCGCGAGTCTCGCCCAGCCCGTCAA---------ACCCAACGCAATTCG-----------AGGC-----AA------------------AGACCAGTGCACGATTAGATAACCCATTGA-C------------------T----TT---------TTCC-------------CCCTTGGG-------------ATC------C---AGAAAA--------AAAAACATTATCCAGCG-----------------------------------AGAGTAGAGAGTGAGAGGA--AC----------------GG---C---CGAAGATCACGGAAGAGATCATGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCG-----------------------------------AGAGTAGAGAGTGAGAGGA--....................................................2412.002000002
............................................................................................................................................................................................................................................................................GTCG------------AGGCAGTTGCCAAAATGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................................ATTGAGCGTGCGATCGA-----------------------------------------------------------------------TT----CGA---------------------TC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAATCGATC-----------CGGTCCGAT-------G---GC...........................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................................................TAATTAGTAAGTCAAGTC---GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAGTGAGAGGA--AC----------------GG---C---.........................1911.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCG-----------AGGC-----AA------------------AGACCA..........................................................................................................................................................................................................................................................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACATTATCCAGCG-----------------------------------AGAGTAGAGA...............................................................2611.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------TCC-----------GATTGG----------ACCCGAATC................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACGATTAGATAACCC.......................................................................................................................................................................................................................................1911.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAATTCG-----------AGGC-----AA------------------AGAC............................................................................................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACATTATCCAGCG-----------------------------------AGAGTAGAGA...............................................................2711.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGG-------------ATC------C---AGAAAA--------AAAA.........................................................................................................................1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------TCC-----------GATTGG----------ACCCGAATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................GTT-----TAATTAGTAAGTCAAGTC---GTCG------------AG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------AGAGTAGAGAGTGAGAGGA--AC----------------GG---C---C........................2611.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---C---CGAAGATCACGGAAGAGAT......2211.001000010
droBip1
CA-----TACATATGTACCTTATAGAGATGCCTTATACTATGAA--TATGT------------------GT-GGGCGCCAA--------------------------AG-GAA------------------AA----GTC-T---------------------------------------------------------------------------AT---TGACG----ACCATTTGGGT-----TAATCAGTAAGTCAAGTC---GGCG------------AGGCAGTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTGCGATCGA-----------------------------------------------------------------------T----CCGA---------------------TTGGACCC------G----A----------ATCCGATTGGATC-----------CGGTCCGAT-------G---GCGCAGGTTTCCTTTGCCA--CCAGTTCTGGCAGCCTCGCGAGTCTCACCCAGCCCGTCAA---------ACCCAACGCAATTCG-----------AGGG-----AA------------------CGACCAGTGCACGATTAGATAACCCATTGC-C------------------T----TT---------TTCC-------------CCCTTGGG-------------ATCCATATCC---AGAAAA--------AAAAGCATTATCCAGAG-------------------------------------AGT---GAGTGAGGGGA--GAG---ATCAC-------------------AGATCACGGAAGAGATCATGTCSizeHit CountTotal NormTotal
No Reads
dp5
TA-----TACAAATAAATCGGATGTAG----------------ACGTATAT------------------ATGGGGCGCCAA-------------------------GAG-GGACGCAGGGACACGGCGATCCG----ATCTTTTG--------------------------------------------------------------------GTCGATCACCGACG----ATCAT-TGGAT-----CAATTAATAAGTCAAGTC---GAAA-------------GGCGTTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGTACGA-----------------------------------------------------------------------------GATCCGA---------------------TTC-----------AATCCG----------ATTCGATT----------------CGATTCGATTGTCGAG-CAGCCACAGGTTTCCTTTGTGG--CCAGCGCCAGCTGCCTCGCGAGTCTCGTCCAAGTAGTCGATCGAACGCTATCCAACACAGTCCG-----------TGGG-----GA-AACAGCCCGACCG---ACCGCCAGTGCAAGATTAGGTAACAGAAGAA-T------------------T-----CCCATTCTTTTTTTTTGATACGCTGTACA--------------------------CCC---G-A--------------------AG--------AAGCAGCCACCGCCAGAGCACACTGGACCAAGA---AT---CAA---GCAAA--GAA---AGCGC------CAC---C--GCCCAGGCAGAAAA-------ATGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCG-----------TGGG-----GA-AACAGCCCGAC......................................................................................................................................................................................................................................................................2112.0020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCG----------ATTCGATT----------------CGATT............................................................................................................................................................................................................................................................................................................................................................................................................1921.5030300000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGTACA--------------------------CCC---G-A--------------------AG--------AAG.......................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGATTGTCGAG-CAGCCACAGG......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
.............................................................................................................................................................................................................................CCGACG----ATCAT-TGGAT-----CACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-----GA-AACAGCCCGACCG---ACCGCCA..........................................................................................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGTCGAG-CAGCCACA........................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................CGACG----ATCAT-TGGAT-----CAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000000
.............................................................................................................................................................................................................................................................ATAAGTCAAGTC---GAAA-------------GGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................A-------------------------GAG-GGACGCAGGGACACGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000010
..........................G----------------ACGTATAT------------------ATGGGGCGCCAA-------------------------GAG-GGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..................................................................................................................................................................................................................................................................................................TTGCCAAAATGCCAATGAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGAGCACACTGGACCA............................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------TGGG-----GA-AACAGCCCGACCG---ACCGCC...........................................................................................................................................................................................................................................................2711.0010001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACCAAGA---AT---CAA---GCAAA--GA..................................................2311.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAGTCGATCGAACGCT.......................................................................................................................................................................................................................................................................................................................1811.0010000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACCAAGA---AT---CAA---GCAAA--....................................................2011.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------AATCCG----------ATTCGATT----------------CGAT.............................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
........................................................................................................................................................................................................................GATCACCGACG----ATCAA-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.2510000000100
droPer2
GA-----CGTATATATG-------------------------------------------------------GGGCGCCAA-------------------------GAG-GGACGCAGGAACACGGCGATGCG----ATCTTTTG--------------------------------------------------------------------GTCGATCACCGACG----ATCAT-TGGAT-----CAATTAATAAGTCAAGTC---GAAA-------------GGCGTTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGTACGA-----------------------------------------------------------------------------GATCCGA---------------------TTC-----------AATCCG----------ATTCGATTCGATT-----------CGATTCGATTGTCGAG-CAGCCGCAGGTTTCCTTTGTGG--CCAGCGCCAGCTGCCTCGCGAGTCTCGTCCAAGTAGTCGATCGAACGCTATCCAACGCAGTCCG-----------TGGG-----AA--ACAGTCCGACCG---ACCGCCAGTGCAAGATTAGGTAACAGAAGAA-T------------------T-----CCCAATCTTTTTTATTGATTCGCTGTACA--------------------------CCC---G-A--------------------AG--------AAGCAGCCACCGCCAGAGCACACTGGACCAAGA---AT---CAA---GCAAA--GAA---AGCGC------CAC---C--CCCCAGGCAGAAGA-------ATGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................TAATAAGTCAAGTC---GAAA-------------GGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAAGATTAGGTAACAGAAGAA-T------------------T-----CT......................................................................................................................................................................................................2911.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCG-----------TGGG-----AA--ACAGTCCGA.......................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATTAGGTAACAGAAGAA-T------------------..............................................................................................................................................................................................................2211.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------AATCCG----------ATTCGATTCGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................1921.002200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---G-A--------------------AG--------AAGCAGCCACCGCCAGAG........................................................................................2311.001000001
.......................................................................................................................................................................................................................................................................................................................ATTGACATTGAGCGTACGA-----------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGTAGTCGATCGAA...........................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCG----------ATTCGATTCGATT-----------.................................................................................................................................................................................................................................................................................................................................................................................................................1920.501010000
droWil2
CA-----ATAGTT--TATAATATA------------------------TAT------------------CT-TTGCGTTATTGAAACAATCAATCGAAGGAAGG--AAG-CAA------------------AA----GTC-TTTT--------------------------------------------------------------------GTCGAT---CAA-------------------------TT---------AATC---GCAA-------------TGCATTTGCCAAAATGCCAATGAGACATTGACATTGAGCGTACGATCGG-----------------------------------------------------------------------CTCGATCCA---------------------TCC-----------AACCCG----------ACATGGTTATAGA-CAAACCG------TCA----G----GC---AGGCAGGTTTCTTTTTA-GTTAGAACGTTAGAGGCGACACGAGTCTCGCCAAGTACACCAA---------ACCCAACGCAATTCG-----------ACGA-----AAGAATTGTCTCATTAGAAATCG-AAATAC-ATATTAGATAACCAACAAAAAATA-CGGTTTCTTTAGGTTCGTTTT-----TTGTTTTTTT-----------AGTTTAGT-------------TT---------------------------------------------------------------------------------------------------AG---TGAGC------AAA-TCC---T------CCAGCA-------ATGTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTTTA-GTTAGAACGTTAGAGGC..........................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATTGTCTCATTAGAAATC..............................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACCG------TCA----G----GC---AGGCAG.......................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
...................................................................................................GAAGG--AAG-CAA------------------AA----GTC-TTTT--------------------------------------------------------------------GTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..........................................................................................................................................................................................................................................................................................................................GACATTGAGCGTACGATCGG-----------------------------------------------------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
TG-----TACATATATATAT---A--G----------------A--TATATGCTTGTACTTGTATCGCATC-GGGCGCCAA---------TAA--GC---AGGGTAGAG-GAA------------------AA----GTG-TTTT-----------------TCCTTTTCGATTCTGTTGTTGTGGTTGTTGTAGTTGTAGTTAGTCTTGTTGTTGGCA---ACT--------CAC-CG-AA-----CAATTAATAAGTCAAATC---GAAACTAAACGACTAAATGCATTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGCCT---TGCTTGCCCCACAACCTA------------------------------------------------CCGA----TC-CTCCAA--T---CCAACACCATATCGACGA-----------TCTTCA----------ATCTTCACAGGG-------------------CT-A----TC---GAGCAGGTTTC-TTTATAG--CAAACGCCAGCAGCGTCGCGAGTCGCGTCGAGCAAGTCGA---------ACCCAACGCAATTCA----CATTGGGATTG-----AT------------------ACACCAGTGAAAAGTTAGATAACAGATTCAAGATA-C-------------TC-----GC----------------------------AGTTATCATATAAATATATC------T---ATAAA-TATATATACA--CAT--ATAAA-------------------------------------TATCGC---GTATAT--TGG-------------------------------CAG---CCGCG-------ATGTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAAGTTAGATAACAGATTCA..................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGATA-C-------------TC-----GC----------------------------AGTTATCAT................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGA-----------TCTTCA----------ATC......................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAAGTTAGATAACAGAT.....................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTCAAGATA-C-------------TC-----GC----------------------------AGTTAT...................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
........................................................TACTTGTATCGCATC-GGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATTCAAGATA-C-------------TC-----.......................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAACAGATTCAAGATA-C-------------T.............................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................GCGCCAA---------TAA--GC---AGGGTAGAG-GAA------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCAAGATA-C-------------TC-----GC----------------------------AGTTAT...................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGA-----------TCTTCA----------ATCTTCACAGGG-------------------CT-.......................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATA-C-------------TC-----GC----------------------------AGT......................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTCGA---------ACCCAACGCAA............................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAAGATA-C-------------TC-----GC----------------------------AGTTATCATATA.............................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGA-----------TCTTCA----------ATCTTCACAGGG-------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATTCAAGATA-C-------------TC-----GC----------------------------A........................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACAGATTCAAGATA-C-------------C.............................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACAGATTCAAGATA-C-------------TC-----GC----------------------------AGTT.....................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------TCTTCA----------ATCTTCACAGGG-------------------CT-.......................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTAATAAGTCAAATC---GAAACGAAACGACTAATTGCATTTGCCAAAATGCCAATGAGGCATTGACATTGAGCGTACACCCTG---T-CCCCCCAG-ACCAAA-CCCAGACCCACCGTTCGTACTGTGGCACCCAACCCCGAGAAATGT---------ATCGA--------------------GCGA-----------TCTTCA----------ATCTTCACAGGG-------------------CT-A----TC---GAGCAGGTTTC-TTTATTG--CAAACGCCAGCAGAGTCGCGAGTCGCGTCGAGCAAGTCGA---------ACCTAACGCAATTCATTCACATTAGGTTTGATGATAT------------------AGCCCAGTGAAAAGTTAGATAACAGATTCA-GATAGT-------------TC-----GC----------------------------ACCACTCATATAAATATATA------TCACACACA-TATATATATA--TAT--ATATA-------------------------------------TATCGC---GATTAC--TGG-------------------------------CAGC-CCCGCG-------ATGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................TAATTGCATTTGCCAAAATGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTCGA---------ACCTAACGCAATTCATT......................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATATAAATATATA------TCACACA........................................................................................................................................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT------------------AGCCCAGTGAAAAGTTAGA.............................................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCAATTCATTCACATTAGGTTTG.........................................................................................................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-------------------------------------TATCGC---GATTAC--TGG-------------------------------CAGC-C.................2311.001000001
droGri2
GA-----CATACATATATCTGCT-------------------------------TGTACTTGTAGCGCGAT-GGGCGCCAT---------TGA---C---ATGG--GAG-GAA------------------AA----GTG-TTTTTTTTTATTAGTTTGTTTTCCTTTTGGCTT--------------------------------TTTGTTGTTGGCA---AGTCG--------C-TG-AT-----CAATTAATAAGCCACATC---GAAACAAAACGACAAATAGCATTTGCCAAAATGCCAATGAGGTATTGACATTGAGAGTCACTTCCT-----CCCTAACC-ACCGAATCA----------------------------------------CGGATCTATCGTATCGA---------------------CGA-----------TCTTCG----------ATCTTAACAGGGC-TA--------------TCT-A----TC---GAGCAGGTTTC-TTTATTG--CAAACGCCAGCAGCTTCGCGAGTCGCGTCGAGCAAGTCGA---------ACCCAACGCAATTAA----CATTTGAAT--ATTATAT------------------TCGCCAGTGAAAAGTTAGATAACAGATTCA-CACCG-------------------------------ATA-------------CCCTACCA---------GTCCGTC------C---ATAAA-CCCA---ACACA--A----ATA-------------------------------------TATCGC---GTATTC--TGC-------------------------------AATCGACCGCG-------ATGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................AT---------TGA---C---ATGG--GAG-GAA------------------AA----GTG-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTTCGCGAGTCGCG.............................................................................................................................................................................................................................................................................................................................................1911.00110

Generated: 05/18/2015 at 11:23 AM