ID:

dsi_10295

 Coordinate:

x:9122043-9122320 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.7 -13.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
G5_DMLINEJockey+
mature
  1. 2r:1758696-1758719 -
  2. 3l:22439296-22439319 -
  3. dsi_10295  x:9122115-9122138 -
  4. x:20472272-20472295 -
  5. node_101820:1891-1914 +
star
  1. 2l:18944471-18944496 -
  2. dsi_10295  x:9122170-9122195 -
  3. node_12770:680-705 +

Sense Strand Reads

GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTACCGAAACCAAAATATTCGATTTCCAATTGTTTTTTTTTTTTTTTTGTGAATAACAACTTTTACTTTTACGATAAATTTATAAATTTCTTACGGATATAATTTTTTTTTTTAATCATTCTATTTATTTTGGTTCCAAAAGGAATCAATTCACTCAATTCCTCTGAACTTAACCTAATGTGTGTATAAAGGTATATGAGACCGAGTGGTTTCTTAATTATTTACGGATTTCAAAAAGCCTTACTAAAAACAATTCGGTTGTATCTTCCTCCAGCGGACATCTCTTACTTTCTGGAGGAGAACCTGCCCGATGAGCTGGTGTCC
*******************************************************************************************************************************************************************************........((((((((....))))))))....((((...(((.((.((...((.....))..)).)).)))....))))..************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 M024
male body		 GSM343915
embryo
 M053
female body
 SRR902008
ovaries
 SRR902009
testis
 M023
head
...................................................................................................................................................................................................................................................................................................................................................TACTTTCTGGAGGAGAACCTGCCCGA............. 26 0 1 4.00 4 0 3 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGAC.......................................................................................................................... 24 0 5 3.80 19 12 0 0 0 1 6 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGA........................................................................................................................... 23 0 5 3.60 18 0 5 5 8 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGACCG........................................................................................................................ 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAA.................................................................................................................................................. 20 0 20 2.75 55 36 0 18 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................................GTGTGTATAAAGGTATATGAGACC......................................................................................................................... 24 0 5 2.20 11 4 0 0 0 0 4 0 0 2 1 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGTATA................................................................................................................................ 18 0 7 2.14 15 15 0 0 0 0 0 0 0 0 0 0 0 0
..........TTAGACGAACCGCCCCAAAAGCGGGT...................................................................................................................................................................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTA.......................................................................................................................................... 27 0 7 2.00 14 0 3 4 6 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTATA........................................................................................................................................ 26 0 5 1.80 9 0 0 4 1 4 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGACC......................................................................................................................... 25 0 5 1.80 9 4 3 0 0 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGA............................................................................................................................. 21 0 5 1.40 7 4 3 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAA.................................................................................................................................................. 19 0 20 1.10 22 0 0 16 5 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................TTACTTTCTGGAGGAGAACCTGCCCGA............. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........TAGACGAACCGCCCCAAAAGCGGGT...................................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................GTGTATAAAGGTATATGAGACCGAG...................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................GCCCCAAAAGCGGGTTAAAATGGA............................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................ACGGACATCTCTTACTTTCTGGAG........................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................TGGAGGAGAACCTGCCCGATGAGCTGG..... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................TGTTGTTTTTTTTTTTTTGTGAA............................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................ACTTTCTGGAGGAGAACCTGCCC............... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................ACGGACATCTCTTACTTTCTGGAGGA......................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................AAAAGCGGGTTAAAATGGAT............................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................TTCTGGAGGAGAACCTGCC................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................CAATTCCTCTGAACTTAACCTAATG................................................................................................................................................ 25 0 8 0.88 7 0 0 2 1 0 0 4 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTGTGTA.......................................................................................................................................... 28 0 7 0.86 6 0 2 1 2 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TGTGTATAAAGGTATATGAG............................................................................................................................ 20 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TGTGTATAAAGGTATATGA............................................................................................................................. 19 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GTGTGTATAAAGGTATATGA............................................................................................................................. 20 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TGTGTATAAAGGTATATGAGACC......................................................................................................................... 23 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAAAA................................................................................................................................................ 21 2 20 0.75 15 0 2 4 4 0 0 0 0 0 1 4 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAA................................................................................................................................................. 21 1 20 0.70 14 0 0 6 3 5 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GTGTGTATAAAGGTATAT............................................................................................................................... 18 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTCTATTTATTTTGATTCCAAAAGG..................................................................................................................................................................................... 25 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTATAAAG..................................................................................................................................... 29 0 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................AGCCTGGCCGATGAGCTGGT.... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTAT......................................................................................................................................... 25 0 7 0.43 3 0 0 1 0 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTA.......................................................................................................................................... 24 0 7 0.43 3 0 0 2 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTGTGTAAA........................................................................................................................................ 30 1 5 0.40 2 0 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTATA........................................................................................................................................ 29 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAATGTA.............................................................................................................................................. 26 1 20 0.40 8 0 1 4 0 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTA................................................................................................................................................... 18 0 20 0.35 7 0 6 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTGTG............................................................................................................................................ 26 0 20 0.35 7 0 7 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TATTTATTTTGGTTCCAAAAGGAATC................................................................................................................................................................................. 26 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCT.................................................................................................................................................... 18 0 20 0.30 6 0 0 0 0 0 0 6 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GTGTGTATAAAGGTATA................................................................................................................................ 17 0 7 0.29 2 0 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................AACGACTTTTACTTTAACG........................................................................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTA.............................................................................................................................................. 24 1 20 0.25 5 0 0 5 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CAATTCCTCTGAACTTAACCTAA.................................................................................................................................................. 23 0 8 0.25 2 0 1 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................TCAATTCCTCTGAACTTAACCTAATG................................................................................................................................................ 26 0 8 0.25 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GTGTGTATAAAGGTATATGGGACC......................................................................................................................... 24 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................TTGCTGATATAACTTTTTTTTTT................................................................................................................................................................................................................... 23 3 10 0.20 2 0 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CTAATGTGTGTATAAAGGTATATGAGA........................................................................................................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTATAA....................................................................................................................................... 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTATAA....................................................................................................................................... 30 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATGTGTGTATAAAGGTATATGAGA........................................................................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GTGTGTATAAAGGTATATGAGA........................................................................................................................... 22 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ACTTAACCTAATGTGTGTATAAAGGT................................................................................................................................... 26 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGAGCTTAACCTAATGTGTGTAAA........................................................................................................................................ 26 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAATGTGTGTATAAAGGTATATGAGAC.......................................................................................................................... 27 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GTATAAAGGTATATGAGACC......................................................................................................................... 20 0 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TGTATAAAGGTATATGAGAC.......................................................................................................................... 20 0 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTG.............................................................................................................................................. 24 0 20 0.15 3 0 0 1 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAAA................................................................................................................................................. 20 1 20 0.15 3 0 0 0 0 2 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTTTT............................................................................................................................................ 25 2 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTA................................................................................................................................................... 19 0 20 0.15 3 0 1 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATG................................................................................................................................................ 21 0 20 0.15 3 0 0 1 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTATA............................................................................................................................................ 26 2 20 0.15 3 0 0 2 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAT................................................................................................................................................. 21 0 20 0.15 3 0 0 0 2 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................TGTGTGTATGAATGTATATGAGACC......................................................................................................................... 25 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CTAATGTGTGTATGAATGTATATGAG............................................................................................................................ 26 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGCGTA.......................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTTTTT........................................................................................................................................... 26 2 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CCTCTGAACTTAACCTAATGTGTGTA.......................................................................................................................................... 26 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TGTGTATAAAGGTATA................................................................................................................................ 16 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCAATTCCTCTGAACTTAACCTAACTT............................................................................................................................................... 27 2 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATGAATGTATATGAGAC.......................................................................................................................... 24 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGT................................................................................................................................... 15 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTAT......................................................................................................................................... 28 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CAATTCCTCTGAACTTAACCTAATGTGT............................................................................................................................................. 28 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGTGTATAAAGGTA.................................................................................................................................. 16 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTTTGGTTCCAAAAGGA.................................................................................................................................................................................... 17 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGAACTTAGCCTAATGTGTGTAT......................................................................................................................................... 25 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GTGTGTATGAATGTATATGAGAC.......................................................................................................................... 23 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCAATTCCTCTGAACTTAACCT.................................................................................................................................................... 22 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TCAATTCCTCTGAACTTAACCTA................................................................................................................................................... 23 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................GAACTTAGCCTAATGTGTGTA.......................................................................................................................................... 21 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTGAGTACGGAAACCT........................................................................................................................................................................................................................................................................................................................ 16 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAT.................................................................................................................................................. 20 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTG............................................................................................................................................ 25 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTATA................................................................................................................................................. 21 2 20 0.10 2 0 0 0 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAATGTG.............................................................................................................................................. 26 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAAT................................................................................................................................................ 22 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTACTTT............................................................................................................................................... 22 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACGTAACCTAAAA................................................................................................................................................ 21 3 20 0.10 2 0 0 0 0 0 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATTCTT............................................................................................................................................. 25 3 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTGTGG........................................................................................................................................... 27 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACGTAACCTAATGTG.............................................................................................................................................. 24 1 20 0.10 2 0 0 1 0 0 1 0 0 0 0 0 0 0
....................................................................................TGTTTATTTTTTTATTTTGTTAATA............................................................................................................................................................................................................................................................................. 25 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................CAGTGAGTACGGAAACC......................................................................................................................................................................................................................................................................................................................... 17 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACATAACCTAATGTGTGTC.......................................................................................................................................... 27 2 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GTATCTGTAGGAGAACCTGC................. 20 3 15 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................ATGAGACCGATAGGTT................................................................................................................. 16 2 16 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................TTACGGGTTTCAAAA........................................................................................ 15 1 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................TAGTTTCTGTAGGAGAA...................... 17 2 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATTTATT............................................................................................................................................ 25 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAGCTTAACCTAAA................................................................................................................................................. 20 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTCCTCTGAACGTAACCTAATGTG.............................................................................................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAATTT.............................................................................................................................................. 24 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGAACTTAACCTAATGT............................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAAA................................................................................................................................................ 22 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTATTTTT.............................................................................................................................................. 23 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAATGTGT............................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAACTT............................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGAACTTAACCTAAA................................................................................................................................................. 16 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAACATT.............................................................................................................................................. 24 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAGCTTAACCTAA.................................................................................................................................................. 19 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTACATT............................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTACTTTT.............................................................................................................................................. 24 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAAT................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAGCTTAACCTAATA................................................................................................................................................ 22 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATATT.............................................................................................................................................. 24 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ACAAAATGACTCAATTCACT......................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAAATTT............................................................................................................................................. 25 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTG.............................................................................................................................................. 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATA................................................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAT.................................................................................................................................................. 19 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAACT................................................................................................................................................ 22 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATACT.............................................................................................................................................. 23 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGCTCTGAACTTAACCTAA.................................................................................................................................................. 19 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTCTTT................................................................................................................................................ 21 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTATTC................................................................................................................................................ 21 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTAACTTT.............................................................................................................................................. 23 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAAAT............................................................................................................................................... 23 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ATTCCTCTGAACGTAACCTAATGTGC............................................................................................................................................. 26 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACGTAACCTAA.................................................................................................................................................. 19 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAA.................................................................................................................................................. 22 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTATTTT............................................................................................................................................... 23 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACTTAACCTATTT................................................................................................................................................ 22 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTTTGAACTTAACCTAA.................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGTAAGGTGTGTCTAAAG..................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTCTGAACGTAACCTAAT................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTCCTCTGAACGTAACCTA................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTCTGAACTTAACCTCTT................................................................................................................................................. 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................ATTCCTCTGAACTTAACCTAATGTGT............................................................................................................................................. 26 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTACT................................................................................................................................................. 23 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGAACTTAACCTAAACT............................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CCGGCTAGTGAATCTGCTTGGCGGGGTTTTCGCCCAATTTTACCTAGGTTCACTCATGGCTTTGGTTTTATAAGCTAAAGGTTAACAAAAAAAAAAAAAAAACACTTATTGTTGAAAATGAAAATGCTATTTAAATATTTAAAGAATGCCTATATTAAAAAAAAAAATTAGTAAGATAAATAAAACCAAGGTTTTCCTTAGTTAAGTGAGTTAAGGAGACTTGAATTGGATTACACACATATTTCCATATACTCTGGCTCACCAAAGAATTAATAAATGCCTAAAGTTTTTCGGAATGATTTTTGTTAAGCCAACATAGAAGGAGGTCGCCTGTAGAGAATGAAAGACCTCCTCTTGGACGGGCTACTCGACCACAGG
**************************************************************************************************************************........((((((((....))))))))....((((...(((.((.((...((.....))..)).)).)))....))))..******************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR902008
ovaries
 M025
embryo
........................................................................................................................................................................................................................AGACTTGAATTGGATTACACACATAT........................................................................................................................................ 26 0 5 3.00 15 2 8 0 3 0 0 2 0 0 0
.........................................................................................................................................................................................................................GACTTGAATTGGATTACACACATAT........................................................................................................................................ 25 0 5 2.40 12 0 1 6 1 2 2 0 0 0 0
..........................................................................................................................................................................................................................ACTTGAATTGGATTACACACATATT....................................................................................................................................... 25 0 5 1.20 6 0 0 6 0 0 0 0 0 0 0
..............................................................................................................................................................AAAAAAAATTTGGGAAGATAAATAAAA................................................................................................................................................................................................. 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................AAAAAAAGTCTTATTGTTGAA...................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................TTGGGAAGATAAATAAAACTAAGGT.......................................................................................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AAAAAATTTGGGAAGATAAATAAAA................................................................................................................................................................................................. 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................AAAAAAAACACTTTTAGTTGAAA..................................................................................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................TTGGGAAGATAAATAAAACTAAGGTT......................................................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................ATAAGCTAAAGGTTAACAAAA................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGAGACTTGAATTGGATTACACACATAT........................................................................................................................................ 28 0 5 0.60 3 0 1 0 1 0 0 1 0 0 0
....................................................................................................................................................................................................................AAGGAGACTTGAATTGGATTACACACAT.......................................................................................................................................... 28 0 7 0.57 4 1 1 0 0 0 0 2 0 0 0
........................................................................................................................................................................TGGGAAGATAAATAAAACTAAGGT.......................................................................................................................................................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TGGGAAGATAAATAAAACTAAGGTTTT....................................................................................................................................................................................... 27 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AAAAAAATTAGTAAG........................................................................................................................................................................................................... 15 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................AAAAAAAAAAAACACTTTTAGTTGA....................................................................................................................................................................................................................................................................... 25 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................TTGAATTGGATTACACACATATTT...................................................................................................................................... 24 0 7 0.43 3 1 0 0 1 1 0 0 0 0 0
....................................................................................................................................................................................................................AAGGAGACTTGAATTGGATTACACACA........................................................................................................................................... 27 0 7 0.43 3 2 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACTTGAATTGGATTACACACATATT....................................................................................................................................... 27 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................AGGAGACTTGAATTGGATTACACACATAT........................................................................................................................................ 29 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.........GGATCTGCTTGCCGGG................................................................................................................................................................................................................................................................................................................................................................. 16 2 16 0.31 5 5 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................ATGGACGTGCTACTCGATCA.... 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................AAAAAAAAAAATTATTAAGATGATT..................................................................................................................................................................................................... 25 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGTTAAGGAGACTTGAATTGGATT.................................................................................................................................................. 24 0 8 0.25 2 0 0 0 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................AACTTGAATTGGATTACACACATAT........................................................................................................................................ 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACTTGAATTGGATTACATACATAT........................................................................................................................................ 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AAGACTTGAATTGGATTACACACATAT........................................................................................................................................ 27 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AAGGAGACTTGAATTGGATTACACACATAT........................................................................................................................................ 30 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGAGACTTGAATTGGATTACACACATAT........................................................................................................................................ 28 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GACTTGAATTGGATTACACACATATT....................................................................................................................................... 26 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................CAGACTTGAATTGGATTACACACATAT........................................................................................................................................ 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTGAATTGGATTACACACATATTTC..................................................................................................................................... 26 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................AAAAACACTTTTAGTTGAAA..................................................................................................................................................................................................................................................................... 20 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................TTGAATTGGATTACACACATATTTC..................................................................................................................................... 25 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGAATTGGATAACACACATATTTACAT.................................................................................................................................. 27 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................AAAAAAAAAAATTGGCAAGATAT....................................................................................................................................................................................................... 23 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................GGATTACACACATATT....................................................................................................................................... 16 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACTTGAATTGGATTACACACATA......................................................................................................................................... 26 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................AAGGAGACTTGAATTAGATTACACACAT.......................................................................................................................................... 28 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................CAGGAGACTTGAATTGGATTACACACAT.......................................................................................................................................... 28 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................CTTGAAATGGATTACACACATAT........................................................................................................................................ 23 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTGAATTGGATTACACACATATT....................................................................................................................................... 23 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................AAAGTTTTTCGGAGTGTTT............................................................................. 19 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGTTAAGGAGACTTGAATTGGAT................................................................................................................................................... 23 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................AAGTTAAGGAGACTTGAATTGGAT................................................................................................................................................... 24 1 8 0.13 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................AAAAAAAAAAAACACTTA.............................................................................................................................................................................................................................................................................. 18 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACTTGAATTGGATTAC................................................................................................................................................ 18 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0
.........GGATCTGCTTGGCTGG................................................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.10 2 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACTTGAATTGGATTACACA............................................................................................................................................. 21 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0
....................................................................................................................................................................................................................AAGGAGACTTGAATTGGATTACACAC............................................................................................................................................ 26 0 20 0.10 2 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AGGCCCACATTAAAAAAAAAAA................................................................................................................................................................................................................... 22 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAAAAAAATTTGGGAAGATAAAT..................................................................................................................................................................................................... 23 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................AAAGTTTTTCGGAGTGTT.............................................................................. 18 2 16 0.06 1 1 0 0 0 0 0 0 0 0 0
...............................................GTTCACTCTCGGCTTTG.......................................................................................................................................................................................................................................................................................................................... 17 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAGACTTGAATTGGATT.................................................................................................................................................. 17 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GACTTGAATTGGATTA................................................................................................................................................. 16 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................TTAAGGAGACTTGAATTGG..................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................TTAAGGAGACTTGAATTGGATTA................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..........GATCTGCTTGCCGGG................................................................................................................................................................................................................................................................................................................................................................. 15 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................ATGACTTTTGTTAAG.................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.....TGGCGAATCTGCTTGGAG................................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................AGGAGACTTGAATTGGAT................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................AAAAAAAAAAATTAGTAAGTTTG....................................................................................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
........................................................................................AAAAAAAAAAAAAAGACTTA.............................................................................................................................................................................................................................................................................. 20 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................AAAAAAAAAAAAAGACTTA.............................................................................................................................................................................................................................................................................. 19 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................AGACTTGAATTGGATT.................................................................................................................................................. 16 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................AAGGAGACTTGAATTGGATTACA............................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................ACTTGAATTGGATTA................................................................................................................................................. 15 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
...................................................................................AACAAAAAAAAAAAAAAA..................................................................................................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:9121993-9122370 - dsi_10295 GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAAAATA-TTCG--ATTTC---------CAATTGTTT---TTT------------TTTTTTTTTTGT--------------------------------------------------------------------------------------GAATAACAACT-------------------------------------------------------------TT-TAC-----------------TTTTACGATAAATTTATAAATTTCTTACGGATATAATTTTT--TTTTTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTC------------------------TATTTATTTT----GGTTCCAAAA--------------GGAATCAATTCACT--------------------------------------------CAATTCCTCTGAACTTAACCTAATGTGTGTATAAAGGTATATGAGACCGAGTGGTTTCTTAATTATTTACGGATTTCAAAAA---------------------------------------------------GCCTTACTAAAAACA---ATTCGGT--TGTATCTTCCTCCAGCGGACATCTCTTACTTTCTGGAGGAGAACCTGC-CCGATGAGCTGGTGTCC
droSec2 scaffold_15:340072-340447 - GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAGAATA-TTCG--TTTTC---------CAATTGTTT---TTT--TTTTTTTTTTTTTTTTTTTTGT--------------------------------------------------------------------------------------GAATAATAACT-------------------------------------------------------------TT-TAG-----------------TGTTACGATAAATTTATAAATTTCTTACGGATTTCATTTTTTTTTTTTTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTC------------------------TATTTATTTT----GGTTCCAAAA--------------GGAATCG-TTCAGT--------------------------------------------CAATTCCTCTGC--------------GTCTATAAAGGTATATGAGACCAAATGGTTTCTTAATTATTTACGGATTTCAAAAA---------------------------------------------------GCCTTACTAAAAACA---ATTCGGT--TGTATCTTCCTCCAGCGGACATCTCTTACTTTCTGGAGGAGAACCTGCCCCGATGAGCTGGTGTCC
dm3 chrX:9576323-9576634 - GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAGAATA-TTCG--ATTTCT--------CATT----TT-TT--------------TTTTTTTTTTGT--------------------------------------------------------------------------------------TAATA---ACTTTTAGTTTTAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAAACTTGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------TCTCC-----------------------------AGTTATTTCATAATTTTTAATAAA-TT-CCTTACGGA-----------------------------------------------------------------------------------------------------------------------------------ATTGAAAAAGCAATTAATTCTATCCAACTATTTTTTTTT-----------TTAAGAAAATTCCTTGCTAAAAACA---ATTTGGT--TGTATCTTCCTCCAGCGGATATCTCTTACTTTCTGGAGGAGAACCTGC-CCGATGAGCTGGTGTCC
droEre2 scaffold_4690:5541498-5541898 + GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAGCCAGAAGA-TTAC--ATTTTTATCAC------T-----TCAA--------------TTTTTTTTGTCT--------------------------------------------------------------------------------------GA---------------------------------------------------------------ATGAAAATT-CCAGTATTAATTGAC-ATTTCAGA--------------------------AGCCGGCATTT--TG-----ATCTTTTTCTATGAGGATTTTT-TTT-----------------------------------------------------------------------------AAGTCTTAAA------------TGATTTTAAGGATA----------------------------AGCCTCACAGACAATA-----------ACTTGTAA----AGA--------ATGAAT------------------------------------------------------------------------------------------------------TTCGCC-----------------------------AGTCATTTTTCAAT------------------ATGAA-----------------------------------------------------------------------------------------------------------------------------------TTCGATAAAG--ATTGAGTCTATCCTAAGATTTTTTCTGTAAGGA-TCATTTACGAAAAACCCTTGCTTAAAACC---ATTTCGA--ATTTTCTTCCTTTAGCGGACATCTCCTACTTTCTGGAGGAGAACCTGC-CCGATGAGTTGGTGTCC
droYak3 X:18167579-18168022 - GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAGAAGA-TTCC--ATTTTT-CCAT------T-----TCCATTTTGA--------TTTTTTTTTTGTGACATGGCGAAATTTTATAG------------------------------------------------------------------------------------------------------------------------------------TGAAA-------------ATTGACATTTTTGCA--------------------------AGCCGGCAATT--GA-----ATTTTTTTTTT---------------TTTT---------------------------------------------------------------------TGTAAAGTCTTTAATAAAGTAATGTTTGATTTTAGGGATT----------------------------AGCCT---AAACAATACTAAATGAGTGCCTTTTAA----AGA--------ATAAATTGTAT---------------------------------------------------------------TTAA--TTTAA---GATA----------AACATTTTTGAC-----------------------------AATTATTTTACAATTTCTA--AA--------------T--------------------------------------------------------------------------------------------------------------------------------------------CCAGTGATTCTATCCCAACATTTTTCCTTTAATGATTCATTTGCGC--AACCCTTGCTAAAAACC---ATATGGT--ATTGTCTTCCTCCAGCGGACATCTCCTACTTTCTGGAGGAGAACCTGC-CTGATGAGCTGGTGTCC
droEug1 scf7180000409032:344798-345319 + GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCCAATCCAGAAATTGCACAAATTTTC-CGTTCGCCATT----TTCTA---------GTCCCT-AC----TTTT----------------------------------------------------------------------------------------------------------------------------------------------GACAGGCGAAAGAAAATT-CCAGCATGACTTGAA-TTTTCGCAG-------------------------AGCCGGCTTTT--TTTT----T------------------------CTTTCGAAGGCATGACAACCCTAGGACTTTCTTATACTTTCTTTTAGTATTATTGCCCCTCCCCATGATAATATGTGAAGTACTATATAAAAT---ATTTGAAT------ATTAATGC--------------------------------------------TGAG----------------------------------------------------------TAATATAAT-------------------------------TTTAG--TTCAAGAAGATAAGCGAGCTAAAAAAT--TCTTC-----------------------------ACTTATTTCATAATTTTTCATAA--------------T----------------------------TAAGTGTAGGCTTGAAGAGTGTAGATCGTCTTTTCTCATGAATTTAGTCTAAT----------------------------------TTCGTTTTTTCCAATCTTCAAAA--------------------------------------------------ATCGTTTGCTAAAAAGTCCTCTTTTGAT-TTACTCTTCTCACAGCGGACATGTCTTATTTTCTGGAGGAGAATTTGC-CCGATGAGCTGGTGTCC
droBia1 scf7180000301760:5566674-5566764 - AAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCGCTAATCCCC---CTTCCGT--T-CCTCCTCCCACAGCGGACATCTCCTATTTCCTGGAGGAGAATCTGC-CCGACGAGCTGGTGTCC
droTak1 scf7180000415872:212853-213011 - GGCCGATCACTTGGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTATAGCGGAGTCCAGAAAT-TTCC--GTTTTC--------CATT----TTCCA---------AC---------------------------------------------------------------------------------------------------------------T-----------------------------------GTCACTTTTTGACAGGCTAAAGAAAATT-CCA-----------------TGCAA-------------------------AGCCGGCTTTT--TATTTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTC------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droEle1 scf7180000491013:406172-406349 - GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTA---GCC---CCAGAATT-TTCC--ATTTTC-CGAT------G-----TCCATT--TTTTTTTTTGC-CA----TTCT----------------------------------------------------------------------------------------------------------------------------------------------GACAGATGGATTTATAAG-CCAGCATGAATTGAT-GT--------------------------------------------------------TTTTTTT----------------------------------------------------------------------------------------TGGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGCCGACATTTTGTTTTTTTT--------------------------------
droRho1 scf7180000780080:509082-509171 + AAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGCTAAACCCA---TATTTGT--T-AATCTTTTCGCAGCGGACATCTCCTACTTTCTGGAGGAGAATCTGC-CCGATGAGCTAGTGTCA
droFic1 scf7180000454073:2508240-2508723 - GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTCAAAATGGATCCAAGTGAGTA------AATCTAGAAGT-GTAC--ACTATTTACAG------T-------------------TAACC-CG----TCCT----------------------------------------------------------------------------------------------------------------------------------------------GACAGGAGAAAACAAAATCACAGCACGACTTGAT-CT--------------------------------------------------------TTTTTTTTGTGAATTACTTGTT-----------------------------------------------------------------------------AAAACTAAAA------------AGTTCTT-GGAATTATCGAGGAGTTTTTGGAACAAAAGCT---------------------------------GTAA----A-A--------ATGTATCGTAATTAAATAACACCTCTTACAACATAACATAATTTATTGGTTCCACGTTAAATTAAATTTTAACTTTAACTTTCAACAA-------AAG----------CTAATTAATTTTCTTAATTCAATCGGGAGTATAGTATTTATTTCACAATTTTCGACGA--------------TGAATCA-TTTAGTGTTTTGAATACCAATTAAG---------------------------------------TTAAC---AT----------------------------------TTT-------------GT---------------------------------------------------------------CTCAACCCA---ATCCTGTTCTGCTTTCCCCCTCAGCGGATATCTCCTACTTTCTGGAGGAGAACCTGC-CGGATGAGCTGGTGTCC
droKik1 scf7180000302592:704221-704336 + GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTA---GAAAAACCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTTCATCCATAGGTTTTCCTTTGAATGAGGA----------------TTCTGAC
droAna3 scaffold_13248:1386293-1386348 - GGCCGATCACTTAGACGAACCGCCTCAGAAGCGGCCCAAAATGGATCCAAGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396571:221794-221893 + TTTTT-----------------------------------------------------------------------------------------------------TA---------AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT-TA-CCTTATAAA-----------------------------------------------------------------------------------------------------------------------------------ATTACTAAAAA---------------------------------------------------------------A---AT---------GTTCTCCTTATAGCGGACATCTCCTTCTTTCTGGAGGAGAACCTGC-CCGACGAGTTGGTGTCC
dp5 XL_group3a:802060-802116 - GGCGGATCATTTGGACGAGCCGCCCACAAAGCGGGTTAAAATGGATCCAAGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_15:2095397-2095453 + GGCGGATCATTTGGACGAGCCGCCCACAAAGCGGGTTAAAATGGATCCAAGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:3421334-3421396 + GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTA---TTAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:8649194-8649265 - ATTCTCTATT--------------------GTTTTTTTTTTTTTTTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGTTTTTATTTCAATTCTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACCAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAC
droMoj3 scaffold_6473:16099653-16100005 - GGCCGATCATTTGGACGAACCGCCACAGAAGCGGGTCAAAATGGATCAAAGTGAGTA---TTGTGA---GGA------------------------------------------------------------CG-----GGCGGGA----GTAGTAATAAAAAACAGTCAGCACATTCCCACAAGCTGCATTTCACATATCATGTATTATTTGGATCTATTGCTT---AACATTGCTTTCGGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAGATCCATATT---GATCAGTTCCAGATCAGTTCCATATTGATTCAGAATATTTTGATAAACTAGAT---------------------------------------------------------------TTGA--TATCC---GTTA----------GGCATCCCTAAC-----------------------------CAT------------------ATTATATCATGATATA-----------------------------------------------------------------------------------------------------------------------------------AGTATTAATCA---------------------------------------------------------------A---ATCCTG--------TTTTTCGTAGCGGATCT---GTACTTTCTGGAGGACAATCTGC-CCGATGAGCTGGTGTCC
droGri2 scaffold_15203:11931305-11931448 + GGCCGATCATTTGGACGAACCGCCACAGAAGCGGGTAAAAATGGATCCATGTAAGTT---GTGGAATCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCAGTTCAATCATTCGTCATTTTTCGCCT---AAAATACAAAT-CAA-----------------TGTCAAAATAGATACTTAAA---------------------------TACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAAAATA-TTCG--ATTTC---------CAATTGTTT---TTT------------TTTTTTTTTTGT--------------------------------------------------------------------------------------GAATAACAACT-------------------------------------------------------------TT-TAC-----------------TTTTACGATAAATTTATAAATTTCTTACGGATATAATTTTT--TTTTTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTC------------------------TATTTATTTT----GGTTCCAAAA--------------GGAATCAATTCACT--------------------------------------------CAATTCCTCTGAACTTAACCTAATGTGTGTATAAAGGTATATGAGACCGAGTGGTTTCTTAATTATTTACGGATTTCAAAAA---------------------------------------------------GCCTTACTAAAAACA---ATTCGGT--TGTATCTTCCTCCAGCGGACATCTCTTACTTTCTGGAGGAGAACCTGC-CCGATGAGCTGGTGTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCTGGAGGAGAACCTGC-CCGA.............2614.00400000003010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGAC...................................................................................................................................................................................2453.8019000012010006000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGA....................................................................................................................................................................................2353.601800000005580000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGACCG.................................................................................................................................................................................2613.00300003000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAA...........................................................................................................................................................................................................20202.75550001360001800000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATAAAGGTATATGAGACC..................................................................................................................................................................................2452.201100014000004200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGTATA.........................................................................................................................................................................................1872.1415000015000000000000
..........TTAGACGAACCGCCCCAAAAGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTA...................................................................................................................................................................................................2772.001400000013460000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTATA.................................................................................................................................................................................................2651.80900000040410000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGAGACC..................................................................................................................................................................................2551.80900004013001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGTATATGA......................................................................................................................................................................................2151.40700004003000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAA...........................................................................................................................................................................................................19201.1022000000001651000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTTCTGGAGGAGAACCTGC-CCGA.............2711.00100000000100000000
...........TAGACGAACCGCCCCAAAAGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTATAAAGGTATATGAGACCGAG...............................................................................................................................................................................2511.00100001000000000000
.....................GCCCCAAAAGCGGGTTAAAATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGAGAACCTGC-CCGATGAGCTGG.....2711.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCTGGAGGAGAACCTGC-CC...............2311.00100100000000000000
..........................AAAAGCGGGTTAAAATGGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGAGGAGAACCTGC-C................1911.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCCTCTGAACTTAACCTAATG.........................................................................................................................................................................................................2580.88700400000210000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTGTGTA...................................................................................................................................................................................................2870.86600000012120000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTATAAAGGTATATGAG.....................................................................................................................................................................................2050.80400004000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTATAAAGGTATATGA......................................................................................................................................................................................1950.80400004000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATAAAGGTATATGA......................................................................................................................................................................................2050.80400004000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTATAAAGGTATATGAGACC..................................................................................................................................................................................2350.80400004000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAAAA.........................................................................................................................................................................................................21200.751500010002440040000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAA..........................................................................................................................................................................................................21200.701400000050630000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATAAAGGTATAT........................................................................................................................................................................................1860.67400004000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTATAAAG..............................................................................................................................................................................................2940.50200000010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTAT..................................................................................................................................................................................................2570.43300000020100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTA...................................................................................................................................................................................................2470.43300000000210000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTATA.................................................................................................................................................................................................2950.40200000001100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAATGTA.......................................................................................................................................................................................................26200.40800000031400000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTA............................................................................................................................................................................................................18200.35700000006010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTGTG.....................................................................................................................................................................................................26200.35700000007000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTATTTT----GGTTCCAAAA--------------GGAATC......................................................................................................................................................................................................................................................................................2630.33100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCT.............................................................................................................................................................................................................18200.30600600000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATAAAGGTATA.........................................................................................................................................................................................1770.29200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTA.......................................................................................................................................................................................................24200.25500000000500000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCCTCTGAACTTAACCTAA...........................................................................................................................................................................................................2380.25200000001000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------CAATTCCTCTGAACTTAACCTAATG.........................................................................................................................................................................................................2680.25200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATGTGTGTATAAAGGTATATGAGA....................................................................................................................................................................................2750.20100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTTAACCTAATGTGTGTATAA................................................................................................................................................................................................2750.20100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTATAA................................................................................................................................................................................................3050.20100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTATAAAGGTATATGAGA....................................................................................................................................................................................2450.20100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATAAAGGTATATGAGA....................................................................................................................................................................................2250.20100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTAACCTAATGTGTGTATAAAGGT............................................................................................................................................................................................2650.20100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTGTGTATAAAGGTATATGAGAC...................................................................................................................................................................................2750.20100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAAAGGTATATGAGACC..................................................................................................................................................................................2060.17100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAAAGGTATATGAGAC...................................................................................................................................................................................2060.17100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTG.......................................................................................................................................................................................................24200.15300000020100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAAA..........................................................................................................................................................................................................20200.15300010020000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTA............................................................................................................................................................................................................19200.15300000021000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATG.........................................................................................................................................................................................................21200.15300200000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAT..........................................................................................................................................................................................................21200.15300000000020010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTGAACTTAACCTAATGTGTGTA...................................................................................................................................................................................................2670.14100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTATAAAGGTATA.........................................................................................................................................................................................1670.14100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGT............................................................................................................................................................................................1570.14100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTGTAT..................................................................................................................................................................................................2870.14100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCCTCTGAACTTAACCTAATGTGT......................................................................................................................................................................................................2870.14100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATAAAGGTA...........................................................................................................................................................................................1670.14100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------CAATTCCTCTGAACTTAACCT.............................................................................................................................................................................................................2280.13100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------CAATTCCTCTGAACTTAACCTA............................................................................................................................................................................................................2380.13100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAT...........................................................................................................................................................................................................20200.10200000000200000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTGTG.....................................................................................................................................................................................................25200.10200000002000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTATA..........................................................................................................................................................................................................21200.10200100000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAATGTG.......................................................................................................................................................................................................26200.10200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAAT.........................................................................................................................................................................................................22200.10200000000200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATGTGTGG....................................................................................................................................................................................................27200.10200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTTAACCTAATGT........................................................................................................................................................................................................18200.05100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAAAA.........................................................................................................................................................................................................22200.05100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAATGTGT......................................................................................................................................................................................................27200.05100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTTAACCTAAA..........................................................................................................................................................................................................16200.05100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAAT..........................................................................................................................................................................................................20200.05100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATGTG.......................................................................................................................................................................................................23200.05100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAATA.........................................................................................................................................................................................................22200.05100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAT...........................................................................................................................................................................................................19200.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTGAACTTAACCTAACT.........................................................................................................................................................................................................22200.05100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCTGAACTTAACCTAATACT.......................................................................................................................................................................................................23200.05100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCTCTGAACTTAACCTAA...........................................................................................................................................................................................................22200.05100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCTCTGAACTTAACCTAATGTGT......................................................................................................................................................................................................26200.05100000000001000000
droSec2
GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAGAATA-TTCG--TTTTC---------CAATTGTTT---TTT--TTTTTTTTTTTTTTTTTTTTGT--------------------------------------------------------------------------------------GAATAATAACT-------------------------------------------------------------TT-TAG-----------------TGTTACGATAAATTTATAAATTTCTTACGGATTTCATTTTTTTTTTTTTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTC------------------------TATTTATTTT----GGTTCCAAAA--------------GGAATCG-TTCAGT--------------------------------------------CAATTCCTCTGC--------------GTCTATAAAGGTATATGAGACCAAATGGTTTCTTAATTATTTACGGATTTCAAAAA---------------------------------------------------GCCTTACTAAAAACA---ATTCGGT--TGTATCTTCCTCCAGCGGACATCTCTTACTTTCTGGAGGAGAACCTGCCCCGATGAGCTGGTGTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAA--------------GGAATCG-TTCAGT--------------------------------------------CAATTC............................................................................................................................................................................................................................2570.1410010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAA--------------GGAATCG-TTCAGT--------------------------------------------CAATT.............................................................................................................................................................................................................................2470.1411000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAA--------------GGAATCG-TTCAGT--------------------------------------------CAATTCC...........................................................................................................................................................................................................................2670.1410010
dm3
GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAGAATA-TTCG--ATTTCT--------CATT----TT-TT--------------TTTTTTTTTTGT--------------------------------------------------------------------------------------TAATA---ACTTTTAGTTTTAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAAACTTGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------TCTCC-----------------------------AGTTATTTCATAATTTTTAATAAA-TT-CCTTACGGA-----------------------------------------------------------------------------------------------------------------------------------ATTGAAAAAGCAATTAATTCTATCCAACTATTTTTTTTT-----------TTAAGAAAATTCCTTGCTAAAAACA---ATTTGGT--TGTATCTTCCTCCAGCGGATATCTCTTACTTTCTGGAGGAGAACCTGC-CCGATGAGCTGGTGTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCTGGAGGAGAACCTGC-CCGA.............26110.00100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010400000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGAGGAGAACCTGC-CCGATGAGC........2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........TAGACGAACCGCCCCAAAAGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCTGGAGGAGAACCTGC-C................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGC-CCGATGAGCTGGTGTCC2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTAGACGAACCGCCCCAAAAGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGAGGAGAACCTGC-CCGATGAGC........2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTTCTGGAGGAGAACCTGC-CCGA.............2714.0040000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAACCTGC-CCGAT............1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTGC-CCGATGAGCTGGT....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-CCGATGAGCTGGTGTC.1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTGC-CCGATGAGCT.......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACCTGC-CCGATGAGCTGGT....2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGAGGAGAACCTGC-CCGATGAGC........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGC-CCGATGAGCTGGT....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCCCAAAAGCGGGTTAAAATGGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACCTGC-CCGATGAG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-CCGATGAGCTGGTGTC.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCTGGAGGAGAACCT....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCCGATCACTTAGACGAACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCTGC-CCGATGAGCTGG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGGAGAACCTGC-CCGATGAGCTGG.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................AGCGGGTTAAAATGGATCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGAGAACCTGC-CCGATG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAACA---ATTTGGT--TGTATCT...........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGAGGAGAACCTGC-CCGATG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGGAGAACCTGC-CCGAT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACCTGC-CCGATGAGCTGG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCTGGAGGAGAACCTGC-CC...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................AAAAGCGGGTTAAAATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.GCCGATCACTTAGACGAACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGC-CCGATGAGCTGGTGTCA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGAGGAGAACCTGC-CCGA.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGC-CCGATGAGCTGGTGT..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---ATTTGGT--TGTATCTTCCTCCAG...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGCCGATCACTTAGACGAACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGAACCGCCCCAAAAGCGGGTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGC-CCGATGAGCTGGTGTC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTACTTTCTGGAGGAGAACCTG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTAGACGAACCGCCCCAAAAGCGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCCCAAAAGCGGGTTAAAATGGATCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCTGGAGGAGAACCTGC-CCGAT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAAAGCGGGTTAAAATGGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACCTGC-CCGATGAGC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCTGC-CCGATGAGCTGGTGTCC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCTGGAGGAGAACCTGC-CCGC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGC-CCGATGAGCTGGTG...1820.5010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGT--TGTATCTTCGG.......................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAGCCAGAAGA-TTAC--ATTTTTATCAC------T-----TCAA--------------TTTTTTTTGTCT--------------------------------------------------------------------------------------GA---------------------------------------------------------------ATGAAAATT-CCAGTATTAATTGAC-ATTTCAGA--------------------------AGCCGGCATTT--TG-----ATCTTTTTCTATGAGGATTTTT-TTT-----------------------------------------------------------------------------AAGTCTTAAA------------TGATTTTAAGGATA----------------------------AGCCTCACAGACAATA-----------ACTTGTAA----AGA--------ATGAAT------------------------------------------------------------------------------------------------------TTCGCC-----------------------------AGTCATTTTTCAAT------------------ATGAA-----------------------------------------------------------------------------------------------------------------------------------TTCGATAAAG--ATTGAGTCTATCCTAAGATTTTTTCTGTAAGGA-TCATTTACGAAAAACCCTTGCTTAAAACC---ATTTCGA--ATTTTCTTCCTTTAGCGGACATCTCCTACTTTCTGGAGGAGAACCTGC-CCGATGAGTTGGTGTCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCTGGAGGAGAACCTGC-CCGA.............2612.0022000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCTGGAGGAGAACCTGC-C................2111.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACTTTCTGGAGGAGAACCTGC-C................2511.0010100000
droYak3
GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCGAAACCAGAAGA-TTCC--ATTTTT-CCAT------T-----TCCATTTTGA--------TTTTTTTTTTGTGACATGGCGAAATTTTATAG------------------------------------------------------------------------------------------------------------------------------------TGAAA-------------ATTGACATTTTTGCA--------------------------AGCCGGCAATT--GA-----ATTTTTTTTTT---------------TTTT---------------------------------------------------------------------TGTAAAGTCTTTAATAAAGTAATGTTTGATTTTAGGGATT----------------------------AGCCT---AAACAATACTAAATGAGTGCCTTTTAA----AGA--------ATAAATTGTAT---------------------------------------------------------------TTAA--TTTAA---GATA----------AACATTTTTGAC-----------------------------AATTATTTTACAATTTCTA--AA--------------T--------------------------------------------------------------------------------------------------------------------------------------------CCAGTGATTCTATCCCAACATTTTTCCTTTAATGATTCATTTGCGC--AACCCTTGCTAAAAACC---ATATGGT--ATTGTCTTCCTCCAGCGGACATCTCCTACTTTCTGGAGGAGAACCTGC-CTGATGAGCTGGTGTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACTTTCTGGAGGAGAA.......................1911.00100010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGC-CTGATGAGCTGG.....1911.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTGC-CTGATGAGCTGG.....2011.00101000000000
.GCCGATCACTTAGACGAACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACC---ATATGGT--ATTGTCTTCCTC......................................................2611.00100100000000
..........TTAGACGAACCGCCCCAAAAGCGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTGC-CTGATGAGCTG......1911.00100000010000
droEug1
GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTTAAAATGGATCCAAGTGAGTA---CCCAATCCAGAAATTGCACAAATTTTC-CGTTCGCCATT----TTCTA---------GTCCCT-AC----TTTT----------------------------------------------------------------------------------------------------------------------------------------------GACAGGCGAAAGAAAATT-CCAGCATGACTTGAA-TTTTCGCAG-------------------------AGCCGGCTTTT--TTTT----T------------------------CTTTCGAAGGCATGACAACCCTAGGACTTTCTTATACTTTCTTTTAGTATTATTGCCCCTCCCCATGATAATATGTGAAGTACTATATAAAAT---ATTTGAAT------ATTAATGC--------------------------------------------TGAG----------------------------------------------------------TAATATAAT-------------------------------TTTAG--TTCAAGAAGATAAGCGAGCTAAAAAAT--TCTTC-----------------------------ACTTATTTCATAATTTTTCATAA--------------T----------------------------TAAGTGTAGGCTTGAAGAGTGTAGATCGTCTTTTCTCATGAATTTAGTCTAAT----------------------------------TTCGTTTTTTCCAATCTTCAAAA--------------------------------------------------ATCGTTTGCTAAAAAGTCCTCTTTTGAT-TTACTCTTCTCACAGCGGACATGTCTTATTTTCTGGAGGAGAATTTGC-CCGATGAGCTGGTGTCCSizeHit CountTotal NormTotal
No Reads
droBia1
AAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCGCTAATCCCC---CTTCCGT--T-CCTCCTCCCACAGCGGACATCTCCTATTTCCTGGAGGAGAATCTGC-CCGACGAGCTGGTGTCCSizeHit CountTotal NormTotal
No Reads
droTak1
GGCCGATCACTTGGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTATAGCGGAGTCCAGAAAT-TTCC--GTTTTC--------CATT----TTCCA---------AC---------------------------------------------------------------------------------------------------------------T-----------------------------------GTCACTTTTTGACAGGCTAAAGAAAATT-CCA-----------------TGCAA-------------------------AGCCGGCTTTT--TATTTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTC------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTA---GCC---CCAGAATT-TTCC--ATTTTC-CGAT------G-----TCCATT--TTTTTTTTTGC-CA----TTCT----------------------------------------------------------------------------------------------------------------------------------------------GACAGATGGATTTATAAG-CCAGCATGAATTGAT-GT--------------------------------------------------------TTTTTTT----------------------------------------------------------------------------------------TGGCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGCCGACATTTTGTTTTTTTT--------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGCTAAACCCA---TATTTGT--T-AATCTTTTCGCAGCGGACATCTCCTACTTTCTGGAGGAGAATCTGC-CCGATGAGCTAGTGTCASizeHit CountTotal NormTotal
No Reads
droFic1
GGCCGATCACTTAGACGAACCGCCCCAAAAGCGGGTCAAAATGGATCCAAGTGAGTA------AATCTAGAAGT-GTAC--ACTATTTACAG------T-------------------TAACC-CG----TCCT----------------------------------------------------------------------------------------------------------------------------------------------GACAGGAGAAAACAAAATCACAGCACGACTTGAT-CT--------------------------------------------------------TTTTTTTTGTGAATTACTTGTT-----------------------------------------------------------------------------AAAACTAAAA------------AGTTCTT-GGAATTATCGAGGAGTTTTTGGAACAAAAGCT---------------------------------GTAA----A-A--------ATGTATCGTAATTAAATAACACCTCTTACAACATAACATAATTTATTGGTTCCACGTTAAATTAAATTTTAACTTTAACTTTCAACAA-------AAG----------CTAATTAATTTTCTTAATTCAATCGGGAGTATAGTATTTATTTCACAATTTTCGACGA--------------TGAATCA-TTTAGTGTTTTGAATACCAATTAAG---------------------------------------TTAAC---AT----------------------------------TTT-------------GT---------------------------------------------------------------CTCAACCCA---ATCCTGTTCTGCTTTCCCCCTCAGCGGATATCTCCTACTTTCTGGAGGAGAACCTGC-CGGATGAGCTGGTGTCCSizeHit CountTotal NormTotal
No Reads
droKik1
GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTA---GAAAAACCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTTCATCCATAGGTTTTCCTTTGAATGAGGA----------------TTCTGACSizeHit CountTotal NormTotal
No Reads
droAna3
GGCCGATCACTTAGACGAACCGCCTCAGAAGCGGCCCAAAATGGATCCAAGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........CTTAGACGAACCGCCTCAGAAGCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.......................CTCAGAAGCGGCCCAAAATGGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................AGAAGCGGCCCAAAATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droBip1
TTTTT-----------------------------------------------------------------------------------------------------TA---------AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT-TA-CCTTATAAA-----------------------------------------------------------------------------------------------------------------------------------ATTACTAAAAA---------------------------------------------------------------A---AT---------GTTCTCCTTATAGCGGACATCTCCTTCTTTCTGGAGGAGAACCTGC-CCGACGAGTTGGTGTCCSizeHit CountTotal NormTotal
No Reads
dp5
GGCGGATCATTTGGACGAGCCGCCCACAAAGCGGGTTAAAATGGATCCAAGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
GGCGGATCATTTGGACGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
droPer2
GGCGGATCATTTGGACGAGCCGCCCACAAAGCGGGTTAAAATGGATCCAAGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....GATCATTTGGACGAGCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droWil2
GGCCGATCACTTAGACGAACCGCCCCAGAAGCGGGTCAAAATGGATCCAAGTGAGTA---TTAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................CCCCAGAAGCGGGTCAAAATGGATCCAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100100
droVir3
ATTCTCTATT--------------------GTTTTTTTTTTTTTTTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGTTTTTATTTCAATTCTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACCAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GGCCGATCATTTGGACGAACCGCCACAGAAGCGGGTCAAAATGGATCAAAGTGAGTA---TTGTGA---GGA------------------------------------------------------------CG-----GGCGGGA----GTAGTAATAAAAAACAGTCAGCACATTCCCACAAGCTGCATTTCACATATCATGTATTATTTGGATCTATTGCTT---AACATTGCTTTCGGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAGATCCATATT---GATCAGTTCCAGATCAGTTCCATATTGATTCAGAATATTTTGATAAACTAGAT---------------------------------------------------------------TTGA--TATCC---GTTA----------GGCATCCCTAAC-----------------------------CAT------------------ATTATATCATGATATA-----------------------------------------------------------------------------------------------------------------------------------AGTATTAATCA---------------------------------------------------------------A---ATCCTG--------TTTTTCGTAGCGGATCT---GTACTTTCTGGAGGACAATCTGC-CCGATGAGCTGGTGTCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT---GTACTTTCTGGAGGAC.........................1911.001100000
.......................CACAGAAGCGGGTCAAAATGGATCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droGri2
GGCCGATCATTTGGACGAACCGCCACAGAAGCGGGTAAAAATGGATCCATGTAAGTT---GTGGAATCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCAGTTCAATCATTCGTCATTTTTCGCCT---AAAATACAAAT-CAA-----------------TGTCAAAATAGATACTTAAA---------------------------TACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.GCCGATCATTTGGACGAACCGCCACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
.........TTTGGACGAACCGCCACAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/19/2015 at 01:00 AM