ID:

dsi_10294

 Coordinate:

3r:21046203-21046453 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.4 -15.3 -15.1

Flybase annnotation

exon [3r_21046454_21046652_-]; CDS [3r_21046454_21046652_-]; exon [3r_21046098_21046202_-]; CDS [3r_21046098_21046202_-]; intron [3r_21046203_21046453_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCCGACGGGCCTGAAACTGATGCCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTCACTGTGTCCTTTGGGAATTTTACGGCGGATTTCGTAATTGCATTTGAACATTCCGCCGCGATGGCACCGCTTTGCGGTTCATCTGGCCAACGGTGAAAAACCGATGCGTGGAGATGCAGAACGCTTTCCCGCTGCGGTTGCGGCCTTTTAAGTGGCCATCTGCACTGCGCTTTTCATTGAATTGCATTTCCACCTTTTCGGATTTCATTTTACCTATGAAATAACCCTTTGTTTGTAGTGCGTATCCCAACTGTGCGTCCCACTGCACCGATGCACCGGACAATCGAA
**************************************************************************.((.....((.(((((((.((((..........))))...))))))).)).....)).*************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 M025
embryo
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
..........................................................................................................................................GGTTTATCTGGTCGACGGTG................................................................................................................................................................................................. 20 3 4 2.50 10 0 10 0 0 0 0 0 0 0 0
....................TGCCCGACGGGCTAATGT......................................................................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................TGGGAATTTTACGGCGGA................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.........................................................................................................TTTGAACATTCCGCCGCGATGGCACCG........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................CCCAACTGTGCGTCCCACTGC...................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
................................TAATGTGCGTCGAAGATCTGC.......................................................................................................................................................................................................................................................................................................... 21 3 2 1.00 2 0 0 0 0 0 0 2 0 0 0
.................................................................................................................................................................................................................................................................................................................TATCCCAACTGTGCGTCCCACTG....................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................TGCCCGACGGGCTAATGTGCGTCGA.................................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ACTGAACCGATGCACC........... 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...GACGGGCCTGAAACT............................................................................................................................................................................................................................................................................................................................................. 15 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....ACGGGCCTGAAACTGATGCC....................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................GTGCGTCCCACTGCACCG.................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................TCGTATTTGAATTTGAACATT............................................................................................................................................................................................................................................ 21 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................GATGCAGAACTCTTTCCC.............................................................................................................................................................. 18 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................ATGCAGAACTCTTTCC............................................................................................................................................................... 16 1 10 0.30 3 0 3 0 0 0 0 0 0 0 0
................................................................................................................................................................................ATGAAGAACGCTATCCCG............................................................................................................................................................. 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GCACTAATGCACCGGA........ 16 2 20 0.20 4 0 0 0 0 0 0 0 0 4 0
...........................................................................................................................................................................................................................................................GCCACCTTTTCGGATTTCC................................................................................. 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.........................GACGTGCTAATCTGCG...................................................................................................................................................................................................................................................................................................................... 16 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACTGCTGTTATCATTGAATTG........................................................................................................ 21 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................ATGCGTAGAGATGCGGA........................................................................................................................................................................ 17 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................ATCTGGCTACTGGTGAAAAA............................................................................................................................................................................................ 20 3 20 0.10 2 0 0 0 0 0 0 0 0 0 2
..........................................CGAAGACGGCAAGTAGATTT................................................................................................................................................................................................................................................................................................. 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0
TCTGACGGGCCGGAAAC.............................................................................................................................................................................................................................................................................................................................................. 17 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................GCGGTTCATCTGGCG........................................................................................................................................................................................................ 15 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACGCTGCGGTTGCGG................................................................................................................................................. 15 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TTTCATTGATTTGCATT.................................................................................................... 17 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGGCTGCCCGGACTTTGACTACGGGCTGCCCGATTACACGCAGCTTCTAGCATTCATCTAAAGTGACACAGGAAACCCTTAAAATGCCGCCTAAAGCATTAACGTAAACTTGTAAGGCGGCGCTACCGTGGCGAAACGCCAAGTAGACCGGTTGCCACTTTTTGGCTACGCACCTCTACGTCTTGCGAAAGGGCGACGCCAACGCCGGAAAATTCACCGGTAGACGTGACGCGAAAAGTAACTTAACGTAAAGGTGGAAAAGCCTAAAGTAAAATGGATACTTTATTGGGAAACAAACATCACGCATAGGGTTGACACGCAGGGTGACGTGGCTACGTGGCCTGTTAGCTT
***************************************************************************************************************************************************************************************************************************.((.....((.(((((((.((((..........))))...))))))).)).....)).************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M025
embryo
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
............................................................................................................................................................ACTTGTTGGCTACGCACCTAG.............................................................................................................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................ACGTAAACTTGTAAGGCGG....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................CGCAGGGTGACATGTCGACGT............. 21 3 4 0.50 2 0 0 2 0 0 0 0 0
.................................................................................................ATTGACTAAAACTTGTAAGGCG........................................................................................................................................................................................................................................ 22 3 3 0.33 1 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................CGGAAAGTACCATAACGTA..................................................................................................... 19 3 20 0.30 6 0 0 0 0 6 0 0 0
..........................................................................................................................................................................................................................................................................................TTATTGTGAAACAACCAT................................................... 18 2 12 0.17 2 2 0 0 0 0 0 0 0
....................TAGGACTGCCCGATTACAC........................................................................................................................................................................................................................................................................................................................ 19 3 9 0.11 1 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................................................................TGGCTACGGTGCCTGGTAGCT. 21 3 9 0.11 1 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................................GATACTTTTTAGGGAAAC......................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 1
.......................GGCTGCCAGATTACTCGG...................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................AAAATGGATACATTCTT................................................................ 17 2 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:21046153-21046503 - dsi_10294 TCCGACGGGCCTGAAACTGATGCCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTG--TCCTT------------------------------------------------------TGG--GAATTTTACG----GCGGATTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGCCGCGATGGC------ACCGCTTTGCGGTTCATCTGGCCAAC-GGT-GAAAAAC--CGATGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCAT---------------------CTGCACTGCGCTTTTCA-TTGAATTGCA--TTTC-CACCTT--TTCGGATTTCATT--TTACCTATGAAAT-AACCCTT----------------TG---TTTGTAGTGCGTATCCCAACTGTGC---GTCCCAC------------TG--CACCGA---TGCACCGGACAATCGAA
droSec2 scaffold_13:328978-329328 - TCCGACGGGCCTGAAACTGATGCCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTG--TCCTT------------------------------------------------------TGG--GAATTTTACG----GCGGATTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGCCGCGAAGGC------ACCGCTTTGCGGTTCATCTGGCCAAC-GGT-GAAAAAC--CGATGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCAT---------------------CTGTACTGCGCTTTTCA-TTGAATTGCG--TTTC-CACCTT--TTCGGATTTCATT--ATACCTATGCAAT-AACCCTT----------------TG---TTTGTAGTGCGTATCCCAACTGTGC---GTCCCAC------------TG--CACCGA---TGCACCGGACAATCGAA
dm3 chr3R:21531708-21532058 - TCCGACAGGCCTGAAATTAATGCCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTTAC--TGTG--TCCTT------------------------------------------------------TGG--GTATTTTACG----GCGGATTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGCCGCGATGGC------ACCGCTTTGTTGTCCATCTGACCAAC-GGT-GGAAAAT--CGATGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCA-TTTAAGTGGCCAT---------------------CTGCACTGCGCTTTTCA-TTGCATTGCA--TTTC-CAACTT--TTCGAATTTCATT--ATACCTATGAAAT-AACCCTT----------------TG---TTTGTAGTGGGTATCCCAACTGTGC---GTCCCAC------------TG--CACCGA---TGCACCGGACAATCGAA
droEre2 scaffold_4820:6506579-6506907 + TCCGACGGGCCTAAAACTGATGCCCGATGGGCTGATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTG--TCCTT------------------------------------------------------TGG--GAATTTCACG----GCGGATTTCGTAATTGCATTTGAAAA--------------------------------------------TT------CCGCTGCGATGGC------AACGTTTTGCGGTTCATCAGGCCAAC-GGT-GAA--------------------------------------------------------------------------------------------A-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGCGGCCAT---------------------CTGCGTTGCGCATTTCA-TTGAATTGAA--TTTC-CACCTT--TTCGGATTTCATT--ATACCCATGAAAT-AACCTTT----------------TG---TTTGTAGTGCGTATCCCAATTGTGC---ATCCCAC------------TG--CACCGA---TGCACCGGACTATCGTA
droYak3 3R:24937175-24937529 + TCCGACGGGCCTGAAACTGATGGCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTGTACTTTT------------------------------------------------------TGG--GTATTTTACG----TCGGACTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGGCTCGATGGC------AATGTTTTGCGGTTCAACTGGCCAAC-GGC-GCAAAAGCGCGAAGCGT---------------------------------------AGAGAT--------------------GCA---------GA-AC-GCTTTACCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCAA---------------------CTGCACTGCGCATTTCA-TTGAATTGCA--TTTT-TACCTT--TGCGAATTTCATT--ATACCTATGGAAT-AACCTTT----------------TG---TTTGTAGTGCGTATCCCAACTGTGC---ATCCCAC------------TG--CACCGA---TGCACCGGACAACCAAA
droEug1 scf7180000409682:1087870-1088244 + TCCAACGGGCCTGAAACTGATGCCCGATGGCCTCATGTGTGTCGAAGATCGTAAGTAGATTTCAC--TTTGTTCTCTT------------------------------------------------------TGGGGGAATTTTACG---GGGAGATTTCGTAATTGCATTTGAACC------------------------G-------------------GT------CAGTTTCAATGGCCACGATGGCGTTTTGCGGTTCATCTGACCAAC-GGCTGGATAACCCACAAGCGT---------------------------------------GGAGAT--------------------ACAGTATACAGAGC-CT-GACTGCCTGTTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCCA---------------------CTGCACTGCGCTTTTCA-TTGGATTGCA--TTTT-CACCTT--TTCGGATTTCATT--ATATCTATAAAAT-TACCCTT----------------TG---TTTGTAGTGCGCCTCCCAAGAGTGC---AGCCCAT------------TG--CACCGA---TCCATCGGACAACTGAC
droBia1 scf7180000302136:2389229-2389603 - TCCGACGGGCCTGAAACTGATGCCCGACGGCCTCATGTGCGTCGAAGATCGTAAGTAGATTCCGCCGTGTG--TTCTT------------------------------------------------------TGG--GCATTTAACG---GGGGGATTTCGTAATTGCATTTGAACC--------------------------------------------GT------CCGCCTCGATGGC------TGCATTTTGCGGTCCGCCTGACCAAC-GGCCTGAAAAT--CGAAGCGT---------------------------------------GGATAC--ACACACGCATGGAGTCGTGCA---------GA-ACAGCTTTCCTGTTGCGGTTGCGG-----------------------------------CCT-TTTAAATGGCCCT--------C------------CTGCGCTGTGCATTTCA-CTGAATTGCA--TTTC-CACCTT--TTCGAATGTCATT--ATATCCATAAATC-TACCCTT----------------TG---CTTGTAGCGCGTATCCCAAGTGTGC---AGCCCAC------------TG--CACCGA---GCCACCGGCCCACCAGC
droTak1 scf7180000415367:915247-915627 + TCCGACGGGCCTGAAACTGATGCCCGACGGCCTCATGTGTGTCGAAGATCGTAAGTAGATTTCGT--TGTG--TGT----------------------------GCATGTGTCCATGCGCCC--ATGTTCTTTGGGGGAATTTATCA---GGGGGATTTCGTAATTGCATTTGAAC-----------------------------------------------------------CGATGGC------TGCGTTTTGCGGTTCATCCGTCTGA---------AAGC--CGAAGCGT---------------------------------------GGCGATACTCGC--------------ACA---------GA-GCGGCTTTCCTGTTGCGGTTGCGGCGGCGGC------------------G--------GCCT-CTTAAGTGGCCTT---------------------CTGCTCTGCGCATTTCA-TTGAATTGCA--TTTT-CACCTT--TTCGGATCTCATT--ATATCTATCAATT-TACCCTC----------------TGCCCTTTGTAGTGCGTATTCCAAAAGTGC---TTCCCAC------------TG--CACCGA---TCCACCGGACAACCGAC
droEle1 scf7180000491261:1214655-1215007 + TCCAACGGGTCTGAAGCTGATGGCCGACGGCCTTATGTGTGTGGAAGATTGTAAGTAGATTTTTTACTACA--CTCTA------------------------------------------------------TGC--GAATTTCAGG----GGGGTCTTCGTAATTGCATTCGAGCT--------------------------------------------GT------CCGCCTCGATGGT------CGTGTTTTGCGGTTGAGCTGACCAAA-GGC-GGCCAAC--AGAAGCGT---------------------------------------GGCGAT--------------------ACA---------GA-AC-GCTTCTCTGTTGCGGTTGCGG-----------------------------------CCT-TTTGAGTGGTCCA---------------------CTGCACTGCGCATTTCA-TTCAATTGCA--TTTT-CACCTT--TTCGAATCTCATT--ATTTCAATAAAAT-TACCTTT----------------GG---TTTGTAGCGCGTATCCCAAGTGTGC---GTCCCAC------------TG--CACCGA---TCCATCGGACGACCAAC
droRho1 scf7180000780007:421953-422306 - TCCCACGGGTCTGAAGCTGATGGCTGACGGCCTTTTGTGCGTGGAGGATCGTAAGTAGATTTTTTACTGTG--TTCCT------------------------------------------------------TGG--GAATTTCACG---GGGGGATTTTGTAATTGCATTTGAGCT--------------------------------------------GT------TCGGCTCGATGGG------CATGTTCTGCGGTTCAGCTGACCAAA-GGC-GACCAAC--AGAAGCGT---------------------------------------GGAGAT--------------------ACA---------GG-GA-GCTTCCCTGTTGCGGTTGCGG-----------------------------------TCT-TTTAAGTGGCCTT---------------------CTGCACTGCGCATTTCA-TTGAATTGCA--TTTT-CCCCTT--TTCGGATCTCATT--ATTTCAATAAAAT-TACCTTT----------------TG---CTTGTAGGGCGTATCCCTAGTGTGC---ATCCCAC------------TG--CACCGA---TCCATCGGACGACAGAA
droFic1 scf7180000454055:1450180-1450532 - TCCCACGGGCCTCAAACTGATGGCCGACGGCCTCATGTGCGTCGAAGATCGTAAGTAGATTTGAC--CGTG--TTCTT------------------------------------------------------TGG--GAATTTCGCGGGAGGGGGATTTCGTAATTGCATTCGAACT--------------------------------------------GG------CCGCCCCGATGGC------CGCGTTTTGCGGTTCTGCTGGCCAACATTC-AGCCGGC--TGAAGCGT---------------------------------------GCAGAT--------------------ACA---------GAAAC-GGTTTGCTGTTGCGGTTGCGG-----------------------------------CAT-TTTAAGTGGCCCA---------------------CTGCACTGCGCACTTCA-ATGAATTGCA--TTTA-CACCTT--TTCGGATCTCATT--ATTTCTATTGAAT-TAACTTT----------------TG---TTTGTAGTGCGAGTCCCAAGTGTGC---GTCCTAC------------CG--CACCGA---TTCACAGGACGA----A
droKik1 scf7180000301923:354539-354909 - TCCCACGGGCCTGAAGCTGATGCCCGACGGCCTCATGTGTGTCGAGGATCGTAAGTAGTTTTGCC--TCT-----TTT------------------------------------------------------T-----CGTTTAACG---TGGGGTTTTCTTAATTGCATT-GAT------------------------GCACCACACTGAGCGATT----GTCCTCGCTTGCCTCGATGGCTGC---TGTGTCCTGCGGTCAGTCGGACAGGC-------CAGGT--CGACCCAG---------------------------------------GACGGG--------------------GCA---------GG-AC-GCTTTCCTGGTGCGGTTGCGG-----------------------------------CCT-ATTAAGTGGCCCG-------------------CACTGCAGTGCAAATTTCA-TTGAATCGAATGTATC-CGCCAT--TTCCGATTTCATT--ATATCTATGAAAT-TAACTTT----------------TG----TTGTAGCGCGTGTCCCGAAAGCGAGGTATAA--C------------AGCACAGCGG---TGCCCAGGACGACAAAC
droAna3 scaffold_13340:11597135-11597445 + CCCCACGGGCCTCAAACTGATGTCCGACGGCCTGATGTGTGTCGAAGATCGTAAGTAGCCATGTT--GCTG--TTGTT------------------------------------------------------TGG--GTATTTTACG---AGGGGATTTCGTAATGGGATTTGATT------------------------CGCC----------------TGT------CCACTTCCACTGA------TGCGTTTTGTGGCGGCGTTT------------------------------------------------------------------------C--------------------ACG---------CA-AC-GCTTTTCTGTTGCGGTTGCGG-----------------------------------CCT-ATTAAGTGGCCAT---------------------CTGCACTGCGCGCTTCTGCCAGCTTGTA--ATTCTC------------------GC--ATTTTTATGAAAT-TACTTTT----------------C-----CCCTAGTGTATGTGCCAAGTGTGC---ATAGCAG------------AA--GACCGA---TCCACAAGACGACTGGC
droBip1 scf7180000396691:504638-504959 + CCCCACGGGCCTGAAACTGATGTCCGACGGCCTCATGTGTGTCGAAGATCGTAAGTAGCCATGTT--GCTG--TTGTT------------------------------------------------------TGG--GTATTTTACG---AGGGGATTTCGTAATGGGATTTGAT------------------------GCGCCGGA-----CAACGAACTGT------CCACTTGAACTGA------TGCGTTTTGTGGCCGCGCTG-------------------------C---------------------------------------------AT--------------------GC-----------A-GC-GCTTTTCTGTTGCGGTTGCGG-----------------------------------CCT-ATTAAGTGGCCAT---------------------CTGCACTGCGCGCTTCTGCTAGCTTGTA--ATTC-CCGC-------------------ATTTTTATAAAAT-TACTTTT----------------C-----CCCTAGTGTATGTGCCAAATGAGC---ATGGCAG------------AA--GGCCGA---TCCACAAGACGACAAGC
dp5 2:23562876-23563339 + TCCCACGGGTCTCAGGCTGATGTCGGATGGCCTAATGTGTGTCGAAGATCGTAAGTAGCATTTGC--TTTG--TTCTTTGCCC-TTTGACCTCTCCAGTTCTGTGGCGGAGGACGGGGAGAA--ATG------------------CGTGTAGTGCATTTTGTAATCACATTTGAT------------------------GCGCCT------GCAATTGTCCGT------CCGCCTCAATGGC------TGCGTTTTGTGGTTGAGTTGGTGAAT-ACC-ACA-------GATGCACACAGATACAAGGCACACAGACAGATACAGAAAGAGACAGACAGAT--------------------ACA---------GA-AC-GCATCCTTGTTGCGGTTGCGGCTATTGC------------------GTTC---AGGGCT-ATTAAGTGGCCCT--------TTGCTGGCCTTAACTGCAGAGCGTA-TTCA-TTGAATTTTA--TTCT-TTCCAT--CTT------------GCTTTTATGAAAT-TAACTTT---AACCCCAATTTCTGG---CCCACAGTGCGTGTTAAAAGTGTGC---GGCCAAC------------AG--TGCG------CAGCAGGACGAAAAAT
droPer2 scaffold_3:6334992-6335454 + TCCCACGGGTCTCAGGCTGATGTCGGATGGCCTAATGTGTGTCGAAGATCGTAAGTAGCATTTGC--TTTG--TTCTTTGCCC-TTTGACCTCTCCAGTTCTGTGGAGGAGGACGGGGAGAA--ATG------------------CGTGTAGTGCATTTTGTAATCACATTTGAT------------------------GCGCCT------GCAATTGTCCGT------CCGCCTCAATGGC------TGCGTTTTGTGGTTGAGTTGGTGAAT-ACC-ACA-------GATGCACACAGATACAAGGCACACAGACAGATACAGAAAGAGACAGACAGAT--------------------ACA---------GA-AC-GCATCCTTGTTGCGGTTGCGGCTATTGC------------------GTTC---AGGGCT-ATTAAGTGGCCCT--------TTGCTGGCCTTAACTGCAGAGCGTA-TTCA-TTGAATTTTA--TTCT-CCCATC--TT-------------GCTTATATGAAAT-TAACTTT---AACCCCAATTTCTGG---CCCACAGTGCGTGTCAAAAGTGTGC---GTCCCAC------------AG--TGCG------CAGCAGGACGAAAAAT
droWil2 scf2_1100000004943:14510503-14510577 + TCCGACCGGACTCAAACTGATGGCCGATGGCCTGATGTGCATTGAAGATCGTAAGTAGCTTTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCATGTCC
droVir3 scaffold_12855:6957651-6958070 - dvi_4248 TCCAACGGGCCTCAAGCTGATGCCCGATGGTCTGATGTGCGTCGAAGATCGTAAGTAGCTTTGCC--ATT--------TACCGGATTTATTTTCTGGGTTTTGGG------------GCTTAAAATGTACTTTGG--AA------------------------AATGCATTCCAC-----------GAATGTAACAAGAGCAGTC------GTAATTGCCGGC------ACGG----CTCGC------TGCAT-TCGCGGTTGG------------------ATGC--CG--------------------------------------------------------------------------------------AC-GTGTCCTGGTTGTGGTGGCTGCAGCCACACGAGACTGCAGCTGAGCCTT-ATTACGGCCCTTAA------CATCTG------------------CTCTATTGTTATTTTAA-ATTAATTTCA--TTAC-CCATTTTATTTTAATTTCATTTTACTTCAATTGAAT-TTTGCCC---CACCCTTCTCTTGGC---TCCATAGTACGCATACGCCCCGTAA---AACCCACGAGGCGAGTAAATT--CAACTACAACGCGGCTCAAAGTCTCG
droMoj3 scaffold_6540:25657094-25657480 + TCCCACAGGTCTCAAGCTTATGCCGGATGGCCTTATGTGCGTCGAGGATCGTAAGTAGCTTTGCC--AAT--------TACCC-TTTC---------TTTTTGTGCCCGAGTGTGGGGATTA--GTGCTCTTTGG---------------------------------------GCAAACCAAACCGATGGACACAGCTGCAGCT------GTAATTGTCCAT-------------------------TGCAG-TCGCGGTTG------------------------------CAT---------------------------------------GGC------------------------------------G-AC-GTGTCCTTGCTGTGGTTGCAGCCATCACAGGAGAATGCAGCTGAGCCTTCATAAAGGCCTTTAA------CATCTGCTCCTTTGTTATTTG-CATTTCAATATGATTTTCA-TTTAATTTAA--TTTT-A-----------------------CATTTATTCAAATTGCCCACTTTTAACCCGATT---------TCATAG---------------TTA---AGCCCACGCGGCGCTTAAATA--CAACGACGACACGCGTCAAAGTCGCG
droGri2 scaffold_15074:5844395-5844456 + TCCCACGGGCCTCAAGCTCATGGCCGATGGTCTCATGTGCATCGAAGATCGTAAGTAGCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCCGACGGGCCTGAAACTGATGCCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTG--TCCTT------------------------------------------------------TGG--GAATTTTACG----GCGGATTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGCCGCGATGGC------ACCGCTTTGCGGTTCATCTGGCCAAC-GGT-GAAAAAC--CGATGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCAT---------------------CTGCACTGCGCTTTTCA-TTGAATTGCA--TTTC-CACCTT--TTCGGATTTCATT--TTACCTATGAAAT-AACCCTT----------------TG---TTTGTAGTGCGTATCCCAACTGTGC---GTCCCAC------------TG--CACCGA---TGCACCGGACAATCGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................TGCCCGACGGGCTAATGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200000000002000000
....................................................................................................................................TGG--GAATTTTACG----GCGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.........................................................................................................................................................................TTTGAACA--------------------------------------------TT------CCGCCGCGATGGC------ACCG..............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACTGTGC---GTCCCAC------------TG--C.........................2111.00110000000000000000
................................TAATGTGCGTCGAAGATCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00200200000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCCAACTGTGC---GTCCCAC------------TG--..........................2311.00101000000000000000
....................TGCCCGACGGGCTAATGTGCGTCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
...GACGGGCCTGAAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
....ACGGGCCTGAAACTGATGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC---GTCCCAC------------TG--CACCG.....................1811.00100000000001000000
................................................................................................................................................................................................................................................................GCGGTTCATCTGGCG...........................................................................................................................................................................................................................................................................................................................................................................................15160.06100000000100000000
droSec2
TCCGACGGGCCTGAAACTGATGCCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTG--TCCTT------------------------------------------------------TGG--GAATTTTACG----GCGGATTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGCCGCGAAGGC------ACCGCTTTGCGGTTCATCTGGCCAAC-GGT-GAAAAAC--CGATGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCAT---------------------CTGTACTGCGCTTTTCA-TTGAATTGCG--TTTC-CACCTT--TTCGGATTTCATT--ATACCTATGCAAT-AACCCTT----------------TG---TTTGTAGTGCGTATCCCAACTGTGC---GTCCCAC------------TG--CACCGA---TGCACCGGACAATCGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................TAATGTGCGTCGAAGATCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100
dm3
TCCGACAGGCCTGAAATTAATGCCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTTAC--TGTG--TCCTT------------------------------------------------------TGG--GTATTTTACG----GCGGATTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGCCGCGATGGC------ACCGCTTTGTTGTCCATCTGACCAAC-GGT-GGAAAAT--CGATGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCA-TTTAAGTGGCCAT---------------------CTGCACTGCGCTTTTCA-TTGCATTGCA--TTTC-CAACTT--TTCGAATTTCATT--ATACCTATGAAAT-AACCCTT----------------TG---TTTGTAGTGGGTATCCCAACTGTGC---GTCCCAC------------TG--CACCGA---TGCACCGGACAATCGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................AATGCCCGACGGGCTAATGTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTT..........................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACTGTGC---GTCCCAC------------TG--CACC......................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000
...............................CTAATGTGCGTCGAAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................TGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTT..........................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCCGACGGGCTAATGTGCGTCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................TGACCAAC-GGT-GGAAAAT--CGATGCGT---------------------------------------GGA........................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTAATGTGCGTCGAAGATCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GGGCTAATGTGCGTCGAAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CGGATTTCGTAATTGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGGGCTAATGTGCGTCGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-CAACTT--TTCGAATTTCATT--ATACC..................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAATGCCCGACGGGCTAATGTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCCAACTGTGC---GTCCCAC------------TG--C.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGC---GTCCCAC------------TG--CACCG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCCGACGGGCTAATGTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGCGGTTGCGG-----------------------------------CCA-TTTAAGTGGCCA.......................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AATTAATGCCCGACGGGCTAATGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCCCAACTGTGC---GTCCCAC------------TG--..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................CCGACGGGCTAATGTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............AATTAATGCCCGACGGGCTAATGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATT--ATACCTATGAAAT-AACCC....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GGGCTAATGTGCGTCGAAGATCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................AATGCCCGACGGGCTAATGTGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................AT--------------------GCA---------GA-AC-GCTTTCCCGCTGCGGT...............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCT............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CATCTGACCAAC-GGT-GGAAAAT--CGA.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCAC------------TG--CACCGA---TGCACCG..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CACCGA---TGCACCGGACAATCG..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTAGTGGGTATCCCAACTGTGC---GT...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCCCAACTGTGC---GTCCCAC------------TG--..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCCAACTGTGC---GTCCCAC------------TG--CACC......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................T--CGATGCGT---------------------------------------GGAGAT--------------------GCA---------.....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTATCCCAACTGTGC---GTC..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGTGC---GTCCCAC------------TG--C.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAACTGTGC---GTCCCG...........................................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---------------------CTGCACTGCGCTTTTCA-TTGCAT.........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCTAATGTGCGTCGAAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAACTGTGC---GTCCC............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................T-GGAAAAT--CGATGCGT---------------------------------------GG.........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTACG.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTC.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCTGACCAAC-GGT-GGAAAAT--CGATGCGT---------------------------------------...........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACTGTGC---GTCCCAC------------TG--C.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TTCGAATTTCATT--ATACCTATGAAAT-.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TAATGTGCGTCGAAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................CGACGGGCTAATGTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTC.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGCGT---------------------------------------GGAGAT--------------------GCA---------GA-AC-GCTTTCCCGC.....................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAC------------TG--CACCGA---TGCACCGGACAATC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CACCGA---TGCACCGGACAATC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGTGC---GTCCCAC------------TG--CACCG.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................T------CCGCCGCGATGGC------ACCGCTTTGTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCCGACGGGCTAATGTGCGTCGAAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CACCGA---TGCACCGGACA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGC---GTCCCAC------------TG--CACCGA---TGCACCG..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTATCCCAACTGTGC---GTCCCAC------------T.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CAAC-GGT-GGAAAAT--CGATGCGT---------------------------------------GGAGA......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCCGACGGGCCTAAAACTGATGCCCGATGGGCTGATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTG--TCCTT------------------------------------------------------TGG--GAATTTCACG----GCGGATTTCGTAATTGCATTTGAAAA--------------------------------------------TT------CCGCTGCGATGGC------AACGTTTTGCGGTTCATCAGGCCAAC-GGT-GAA--------------------------------------------------------------------------------------------A-AC-GCTTTCCCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGCGGCCAT---------------------CTGCGTTGCGCATTTCA-TTGAATTGAA--TTTC-CACCTT--TTCGGATTTCATT--ATACCCATGAAAT-AACCTTT----------------TG---TTTGTAGTGCGTATCCCAATTGTGC---ATCCCAC------------TG--CACCGA---TGCACCGGACTATCGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................GATGGGCTGATGTGCGTCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTTT----------------TG---TTTGTAGTGCGTATCC.............................................................2511.0010000010
............................GGGCTGATGTGCGTCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
........GCCTAAAACTGATGCCCGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................................................AATTTCACG----GCGGATTTCGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
TCCGACGGGCCTGAAACTGATGGCCGACGGGCTAATGTGCGTCGAAGATCGTAAGTAGATTTCAC--TGTGTACTTTT------------------------------------------------------TGG--GTATTTTACG----TCGGACTTCGTAATTGCATTTGAACA--------------------------------------------TT------CCGGCTCGATGGC------AATGTTTTGCGGTTCAACTGGCCAAC-GGC-GCAAAAGCGCGAAGCGT---------------------------------------AGAGAT--------------------GCA---------GA-AC-GCTTTACCGCTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCAA---------------------CTGCACTGCGCATTTCA-TTGAATTGCA--TTTT-TACCTT--TGCGAATTTCATT--ATACCTATGGAAT-AACCTTT----------------TG---TTTGTAGTGCGTATCCCAACTGTGC---ATCCCAC------------TG--CACCGA---TGCACCGGACAACCAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................TAATGTGCGTCGAAGATCGTAAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................TGGCCAAC-GGC-GCAAAAGCGCGAAGC....................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCCCAACTGTGC---ATCCCAC------------..............................2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---ATCCCAC------------TG--CACCGA---TGCACCGGAC.......2711.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAC------------TG--CACCGA---TGCACCGGAC.......2511.00101000000000
...............ACTGATGGCCGACGGGCTAATGTGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.....................GGCCGACGGGCTAATGTGCGTCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------TG--CACCGA---TGCACCGGAC.......2011.00110000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAC------------TG--CACCGA---TGCACC...........2111.00100100000000
........................................GTCGAAGATCGTAAGTAGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................................TAATGTGCGTCGAAGATCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100000010000
droEug1
TCCAACGGGCCTGAAACTGATGCCCGATGGCCTCATGTGTGTCGAAGATCGTAAGTAGATTTCAC--TTTGTTCTCTT------------------------------------------------------TGGGGGAATTTTACG---GGGAGATTTCGTAATTGCATTTGAACC------------------------G-------------------GT------CAGTTTCAATGGCCACGATGGCGTTTTGCGGTTCATCTGACCAAC-GGCTGGATAACCCACAAGCGT---------------------------------------GGAGAT--------------------ACAGTATACAGAGC-CT-GACTGCCTGTTGCGGTTGCGG-----------------------------------CCT-TTTAAGTGGCCCA---------------------CTGCACTGCGCTTTTCA-TTGGATTGCA--TTTT-CACCTT--TTCGGATTTCATT--ATATCTATAAAAT-TACCCTT----------------TG---TTTGTAGTGCGCCTCCCAAGAGTGC---AGCCCAT------------TG--CACCGA---TCCATCGGACAACTGACSizeHit CountTotal NormTotal
No Reads
droBia1
TCCGACGGGCCTGAAACTGATGCCCGACGGCCTCATGTGCGTCGAAGATCGTAAGTAGATTCCGCCGTGTG--TTCTT------------------------------------------------------TGG--GCATTTAACG---GGGGGATTTCGTAATTGCATTTGAACC--------------------------------------------GT------CCGCCTCGATGGC------TGCATTTTGCGGTCCGCCTGACCAAC-GGCCTGAAAAT--CGAAGCGT---------------------------------------GGATAC--ACACACGCATGGAGTCGTGCA---------GA-ACAGCTTTCCTGTTGCGGTTGCGG-----------------------------------CCT-TTTAAATGGCCCT--------C------------CTGCGCTGTGCATTTCA-CTGAATTGCA--TTTC-CACCTT--TTCGAATGTCATT--ATATCCATAAATC-TACCCTT----------------TG---CTTGTAGCGCGTATCCCAAGTGTGC---AGCCCAC------------TG--CACCGA---GCCACCGGCCCACCAGCSizeHit CountTotal NormTotal
No Reads
droTak1
TCCGACGGGCCTGAAACTGATGCCCGACGGCCTCATGTGTGTCGAAGATCGTAAGTAGATTTCGT--TGTG--TGT----------------------------GCATGTGTCCATGCGCCC--ATGTTCTTTGGGGGAATTTATCA---GGGGGATTTCGTAATTGCATTTGAAC-----------------------------------------------------------CGATGGC------TGCGTTTTGCGGTTCATCCGTCTGA---------AAGC--CGAAGCGT---------------------------------------GGCGATACTCGC--------------ACA---------GA-GCGGCTTTCCTGTTGCGGTTGCGGCGGCGGC------------------G--------GCCT-CTTAAGTGGCCTT---------------------CTGCTCTGCGCATTTCA-TTGAATTGCA--TTTT-CACCTT--TTCGGATCTCATT--ATATCTATCAATT-TACCCTC----------------TGCCCTTTGTAGTGCGTATTCCAAAAGTGC---TTCCCAC------------TG--CACCGA---TCCACCGGACAACCGACSizeHit CountTotal NormTotal
No Reads
droEle1
TCCAACGGGTCTGAAGCTGATGGCCGACGGCCTTATGTGTGTGGAAGATTGTAAGTAGATTTTTTACTACA--CTCTA------------------------------------------------------TGC--GAATTTCAGG----GGGGTCTTCGTAATTGCATTCGAGCT--------------------------------------------GT------CCGCCTCGATGGT------CGTGTTTTGCGGTTGAGCTGACCAAA-GGC-GGCCAAC--AGAAGCGT---------------------------------------GGCGAT--------------------ACA---------GA-AC-GCTTCTCTGTTGCGGTTGCGG-----------------------------------CCT-TTTGAGTGGTCCA---------------------CTGCACTGCGCATTTCA-TTCAATTGCA--TTTT-CACCTT--TTCGAATCTCATT--ATTTCAATAAAAT-TACCTTT----------------GG---TTTGTAGCGCGTATCCCAAGTGTGC---GTCCCAC------------TG--CACCGA---TCCATCGGACGACCAACSizeHit CountTotal NormTotal
No Reads
droRho1
TCCCACGGGTCTGAAGCTGATGGCTGACGGCCTTTTGTGCGTGGAGGATCGTAAGTAGATTTTTTACTGTG--TTCCT------------------------------------------------------TGG--GAATTTCACG---GGGGGATTTTGTAATTGCATTTGAGCT--------------------------------------------GT------TCGGCTCGATGGG------CATGTTCTGCGGTTCAGCTGACCAAA-GGC-GACCAAC--AGAAGCGT---------------------------------------GGAGAT--------------------ACA---------GG-GA-GCTTCCCTGTTGCGGTTGCGG-----------------------------------TCT-TTTAAGTGGCCTT---------------------CTGCACTGCGCATTTCA-TTGAATTGCA--TTTT-CCCCTT--TTCGGATCTCATT--ATTTCAATAAAAT-TACCTTT----------------TG---CTTGTAGGGCGTATCCCTAGTGTGC---ATCCCAC------------TG--CACCGA---TCCATCGGACGACAGAASizeHit CountTotal NormTotal
No Reads
droFic1
TCCCACGGGCCTCAAACTGATGGCCGACGGCCTCATGTGCGTCGAAGATCGTAAGTAGATTTGAC--CGTG--TTCTT------------------------------------------------------TGG--GAATTTCGCGGGAGGGGGATTTCGTAATTGCATTCGAACT--------------------------------------------GG------CCGCCCCGATGGC------CGCGTTTTGCGGTTCTGCTGGCCAACATTC-AGCCGGC--TGAAGCGT---------------------------------------GCAGAT--------------------ACA---------GAAAC-GGTTTGCTGTTGCGGTTGCGG-----------------------------------CAT-TTTAAGTGGCCCA---------------------CTGCACTGCGCACTTCA-ATGAATTGCA--TTTA-CACCTT--TTCGGATCTCATT--ATTTCTATTGAAT-TAACTTT----------------TG---TTTGTAGTGCGAGTCCCAAGTGTGC---GTCCTAC------------CG--CACCGA---TTCACAGGACGA----ASizeHit CountTotal NormTotal
No Reads
droKik1
TCCCACGGGCCTGAAGCTGATGCCCGACGGCCTCATGTGTGTCGAGGATCGTAAGTAGTTTTGCC--TCT-----TTT------------------------------------------------------T-----CGTTTAACG---TGGGGTTTTCTTAATTGCATT-GAT------------------------GCACCACACTGAGCGATT----GTCCTCGCTTGCCTCGATGGCTGC---TGTGTCCTGCGGTCAGTCGGACAGGC-------CAGGT--CGACCCAG---------------------------------------GACGGG--------------------GCA---------GG-AC-GCTTTCCTGGTGCGGTTGCGG-----------------------------------CCT-ATTAAGTGGCCCG-------------------CACTGCAGTGCAAATTTCA-TTGAATCGAATGTATC-CGCCAT--TTCCGATTTCATT--ATATCTATGAAAT-TAACTTT----------------TG----TTGTAGCGCGTGTCCCGAAAGCGAGGTATAA--C------------AGCACAGCGG---TGCCCAGGACGACAAACSizeHit CountTotal NormTotal
No Reads
droAna3
CCCCACGGGCCTCAAACTGATGTCCGACGGCCTGATGTGTGTCGAAGATCGTAAGTAGCCATGTT--GCTG--TTGTT------------------------------------------------------TGG--GTATTTTACG---AGGGGATTTCGTAATGGGATTTGATT------------------------CGCC----------------TGT------CCACTTCCACTGA------TGCGTTTTGTGGCGGCGTTT------------------------------------------------------------------------C--------------------ACG---------CA-AC-GCTTTTCTGTTGCGGTTGCGG-----------------------------------CCT-ATTAAGTGGCCAT---------------------CTGCACTGCGCGCTTCTGCCAGCTTGTA--ATTCTC------------------GC--ATTTTTATGAAAT-TACTTTT----------------C-----CCCTAGTGTATGTGCCAAGTGTGC---ATAGCAG------------AA--GACCGA---TCCACAAGACGACTGGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GACCGA---TCCACAAGACGA.....1912.002110000
...........TCAAACTGATGTCCGACGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........GCCTCAAACTGATGTCCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--GACCGA---TCCACAAGACGACT...2211.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GACCGA---TCCACAAGACGACT...2111.001000010
.....................GTCCGACGGCCTGATGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..................GATGTCCGACGGCCTGATGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.........................GACGGCCTGATGTGTGTCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................GATGTCCGACGGCCTGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
CCCCACGGGCCTGAAACTGATGTCCGACGGCCTCATGTGTGTCGAAGATCGTAAGTAGCCATGTT--GCTG--TTGTT------------------------------------------------------TGG--GTATTTTACG---AGGGGATTTCGTAATGGGATTTGAT------------------------GCGCCGGA-----CAACGAACTGT------CCACTTGAACTGA------TGCGTTTTGTGGCCGCGCTG-------------------------C---------------------------------------------AT--------------------GC-----------A-GC-GCTTTTCTGTTGCGGTTGCGG-----------------------------------CCT-ATTAAGTGGCCAT---------------------CTGCACTGCGCGCTTCTGCTAGCTTGTA--ATTC-CCGC-------------------ATTTTTATAAAAT-TACTTTT----------------C-----CCCTAGTGTATGTGCCAAATGAGC---ATGGCAG------------AA--GGCCGA---TCCACAAGACGACAAGCSizeHit CountTotal NormTotal
No Reads
dp5
TCCCACGGGTCTCAGGCTGATGTCGGATGGCCTAATGTGTGTCGAAGATCGTAAGTAGCATTTGC--TTTG--TTCTTTGCCC-TTTGACCTCTCCAGTTCTGTGGCGGAGGACGGGGAGAA--ATG------------------CGTGTAGTGCATTTTGTAATCACATTTGAT------------------------GCGCCT------GCAATTGTCCGT------CCGCCTCAATGGC------TGCGTTTTGTGGTTGAGTTGGTGAAT-ACC-ACA-------GATGCACACAGATACAAGGCACACAGACAGATACAGAAAGAGACAGACAGAT--------------------ACA---------GA-AC-GCATCCTTGTTGCGGTTGCGGCTATTGC------------------GTTC---AGGGCT-ATTAAGTGGCCCT--------TTGCTGGCCTTAACTGCAGAGCGTA-TTCA-TTGAATTTTA--TTCT-TTCCAT--CTT------------GCTTTTATGAAAT-TAACTTT---AACCCCAATTTCTGG---CCCACAGTGCGTGTTAAAAGTGTGC---GGCCAAC------------AG--TGCG------CAGCAGGACGAAAAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................TTTTGTGGTTGAGTTGGT............................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCGTA-TTCA-TTGA...........................................................................................................................................................2111.0010100000000
..........................ATGGCCTAATGTGTGTCGAAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.....................GTCGGATGGCCTAATGTGTGTCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
TCCCACGGGTCTCAGGCTGATGTCGGATGGCCTAATGTGTGTCGAAGATCGTAAGTAGCATTTGC--TTTG--TTCTTTGCCC-TTTGACCTCTCCAGTTCTGTGGAGGAGGACGGGGAGAA--ATG------------------CGTGTAGTGCATTTTGTAATCACATTTGAT------------------------GCGCCT------GCAATTGTCCGT------CCGCCTCAATGGC------TGCGTTTTGTGGTTGAGTTGGTGAAT-ACC-ACA-------GATGCACACAGATACAAGGCACACAGACAGATACAGAAAGAGACAGACAGAT--------------------ACA---------GA-AC-GCATCCTTGTTGCGGTTGCGGCTATTGC------------------GTTC---AGGGCT-ATTAAGTGGCCCT--------TTGCTGGCCTTAACTGCAGAGCGTA-TTCA-TTGAATTTTA--TTCT-CCCATC--TT-------------GCTTATATGAAAT-TAACTTT---AACCCCAATTTCTGG---CCCACAGTGCGTGTCAAAAGTGTGC---GTCCCAC------------AG--TGCG------CAGCAGGACGAAAAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................CGGATGGCCTAATGTGTGTCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
..................GATGTCGGATGGCCTAATGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
..............................................................................................................................................................................................................................................TGGC------TGCGTTTTGTGGTTGAGTTGG.............................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGTGC---GTCCCAC------------AG--TGC.......................2211.001010000
.................................................................................................GTTCTGTGGAGGAGGACGGGGAGAA--A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
droWil2
TCCGACCGGACTCAAACTGATGGCCGATGGCCTGATGTGCATTGAAGATCGTAAGTAGCTTTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCATGTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................CGATGGCCTGATGTGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200110
.CCGACCGGACTCAAACTGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.CCGACCGGACTCAAACTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
.................................GATGTGCATTGAAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..CGACCGGACTCAAACTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...GACCGGACTCAAACTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.....................GGCCGATGGCCTGATGTGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.............................GCCTGATGTGCATTGAAGATCGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
....ACCGGACTCAAACTGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.........................GATGGCCTGATGTGCATTGAAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
........................CGATGGCCTGATGTGCATTGAAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
...............................CTGATGTGCATTGAAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
TCCAACGGGCCTCAAGCTGATGCCCGATGGTCTGATGTGCGTCGAAGATCGTAAGTAGCTTTGCC--ATT--------TACCGGATTTATTTTCTGGGTTTTGGG------------GCTTAAAATGTACTTTGG--AA------------------------AATGCATTCCAC-----------GAATGTAACAAGAGCAGTC------GTAATTGCCGGC------ACGG----CTCGC------TGCAT-TCGCGGTTGG------------------ATGC--CG--------------------------------------------------------------------------------------AC-GTGTCCTGGTTGTGGTGGCTGCAGCCACACGAGACTGCAGCTGAGCCTT-ATTACGGCCCTTAA------CATCTG------------------CTCTATTGTTATTTTAA-ATTAATTTCA--TTAC-CCATTTTATTTTAATTTCATTTTACTTCAATTGAAT-TTTGCCC---CACCCTTCTCTTGGC---TCCATAGTACGCATACGCCCCGTAA---AACCCACGAGGCGAGTAAATT--CAACTACAACGCGGCTCAAAGTCTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................CGATGGTCTGATGTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003000000100001010000000000000000000000000000000000000000000000000
.........................GATGGTCTGATGTGCGTCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000100000000000000000000000000000000000000000001000
...............................CTGATGTGCGTCGAAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000002000000000000000000000000000000000000000000000000000000
.....................GCCCGATGGTCTGATGTGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
........................CGATGGTCTGATGTGCGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---AACCCACGAGGCGAGT.................................1811.001000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................C-----------GAATGTAACAAGAGCAGTC------GTAATTGCCGGC------.....................................................................................................................................................................................................................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACACGAGACTGCAGCTGAGC.................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000010000
............CAAGCTGATGCCCGATGGTCTGATGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
................................TGATGTGCGTCGAAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
....................TGCCCGATGGTCTGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGGCGAGTAAATT--C.........................1811.001000000000000000000000000000000000000000000000000001000000000000
.............AAGCTGATGCCCGATGGTCTGATGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GGTTGG------------------ATGC--CG--------------------------------------------------------------------------------------AC-GTGTCCTGGTT....................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
..................GATGCCCGATGGTCTGATGTGCGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
.................TGATGCCCGATGGTCTGATGTGCGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCATACGCCCCGTAA---AACCCACGAGG......................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGCGGCTCAAAGTCTCG2111.001000000000000000000000010000000000000000000000000000000000000000
.......GGCCTCAAGCTGATGCCCGATGGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CG--------------------------------------------------------------------------------------AC-GTGTCCTGGTTGTGGT...............................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
........................CGATGGTCTGATGTGCGTCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAA---AACCCACGAGGCGAGTA................................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................CTGATGTGCGTCGAAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
..........CTCAAGCTGATGCCCGATGGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
...........TCAAGCTGATGCCCGATGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCCCCGTAA---AACCCACGAGGC.....................................2511.001000000000000000000000000000000010000000000000000000000000000000
..................GATGCCCGATGGTCTGATGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TCCCACAGGTCTCAAGCTTATGCCGGATGGCCTTATGTGCGTCGAGGATCGTAAGTAGCTTTGCC--AAT--------TACCC-TTTC---------TTTTTGTGCCCGAGTGTGGGGATTA--GTGCTCTTTGG---------------------------------------GCAAACCAAACCGATGGACACAGCTGCAGCT------GTAATTGTCCAT-------------------------TGCAG-TCGCGGTTG------------------------------CAT---------------------------------------GGC------------------------------------G-AC-GTGTCCTTGCTGTGGTTGCAGCCATCACAGGAGAATGCAGCTGAGCCTTCATAAAGGCCTTTAA------CATCTGCTCCTTTGTTATTTG-CATTTCAATATGATTTTCA-TTTAATTTAA--TTTT-A-----------------------CATTTATTCAAATTGCCCACTTTTAACCCGATT---------TCATAG---------------TTA---AGCCCACGCGGCGCTTAAATA--CAACGACGACACGCGTCAAAGTCGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................TTATGTGCGTCGAGGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAGGAGAATGCAGCTGAGCCT...............................................................................................................................................................................................................................2511.001000001
................................TTATGTGCGTCGAGGATCGTAAGTAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droGri2
TCCCACGGGCCTCAAGCTCATGGCCGATGGTCTCATGTGCATCGAAGATCGTAAGTAGCTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................GCCGATGGTCTCATGTGCATCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
.........................GATGGTCTCATGTGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
......................GCCGATGGTCTCATGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110

Generated: 05/18/2015 at 03:39 PM