ID:

dsi_10255

 Coordinate:

2r:12738994-12739163 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [2r_12739164_12739233_+]; exon [2r_12739164_12739271_+]; five_prime_UTR [2r_12738441_12738993_+]; exon [2r_12738441_12738993_+]; intron [2r_12738994_12739163_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCTGGCATTTTTGGCATTTAAGTTTTGCGAAACCAATTTCCTGTCCCCGGTACAGCAATTCATCATAAGATTATACAGTAGAAGTTCGATAGATGAAACACAAATTATGCATAGTCTAATGAAATGGGTTGCGAGATATGTATATAGGAAATATATCTTGTATCTGACTGTGGGAAGAACTGCTGTACACATATTGAATGTCTACCTTTTCCATTGCAGAATTGCACGAGTTGAAGGCGGATAATCGAATCGAACGAGAGAAGCAAAAC
**************************************************.........((...((...((.......(((((.((((((((..((..(((((.......(((((((..........((.((((((((((((.........)))))))))))).)))))))))........)).))).))..)))))))).)))))....))...)).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 O002
Head
...........................................................................................................................................................................................................................................AGGCGGATAATCGAATCGAACGAGAGA........ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TGACTGTAGGAAGGACTGCTGGA.................................................................................. 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................GTTGAAGGCGGATAATCGAATCGA................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AATTGCACGAGTTGAAGGCGGATAAT........................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GAGTTGAAGGCGGATAATCGAATC.................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TTGAAGGCGGATAATCGAATC.................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AATTGCACGAGTTGAAGGCGGATAA......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CATTGCAGAATTGCACGAGTTGAAGGC............................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGAAGGCGGAAAATCGAATCGAACGAGA.......... 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................ATACAGTAGAAGTTCGATAGATGG............................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................ATAATCGAATCGAACGAGA.......... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................CGGATAATCGAATCGAACGAGAG......... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................AGGCGGATAATCGAATCGAACGA............ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GAAGGCGGATAATCGAATCGAACGAGA.......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TGTGGGAAGAACTGTTGTATAT............................................................................... 22 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.....................................................................GATTATACAGTCGACGATC...................................................................................................................................................................................... 19 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................GACAGTGGGAAGGACTG....................................................................................... 17 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0
..........................................................................................................TGTGCATTGTCTAATGAA.................................................................................................................................................. 18 2 14 0.07 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................AACTGTTGTACACATATA.......................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACGACCGTAAAAACCGTAAATTCAAAACGCTTTGGTTAAAGGACAGGGGCCATGTCGTTAAGTAGTATTCTAATATGTCATCTTCAAGCTATCTACTTTGTGTTTAATACGTATCAGATTACTTTACCCAACGCTCTATACATATATCCTTTATATAGAACATAGACTGACACCCTTCTTGACGACATGTGTATAACTTACAGATGGAAAAGGTAACGTCTTAACGTGCTCAACTTCCGCCTATTAGCTTAGCTTGCTCTCTTCGTTTTG
**************************************************.........((...((...((.......(((((.((((((((..((..(((((.......(((((((..........((.((((((((((((.........)))))))))))).)))))))))........)).))).))..)))))))).)))))....))...)).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
....................................................................................................................GATTACTGTTCCCAACGC........................................................................................................................................ 18 2 1 2.00 2 2 0 0 0 0 0
.............................................................GTAGTATTCTAATATGTCATC............................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................................................................................................TAGCTCAGCTTGCTCTCTT....... 19 1 1 1.00 1 0 1 0 0 0 0
.................AAATTGAAAACGCTTTG............................................................................................................................................................................................................................................ 17 1 4 0.25 1 0 0 0 1 0 0
.......................................................................................................................................................................................................ATAGATGGAAAAGGTA....................................................... 16 1 6 0.17 1 1 0 0 0 0 0
............................................................AGTAGTATTCTCATA................................................................................................................................................................................................... 15 1 9 0.11 1 1 0 0 0 0 0
....................................................................................................................GATTACTGTTCCCAACG......................................................................................................................................... 17 2 9 0.11 1 0 0 0 0 1 0
..................................................................................................................................................................................TTGACGACAAGTGTA............................................................................. 15 1 19 0.11 2 1 0 0 0 1 0
.....................................ACATGACAGGGGCCATGAC...................................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 1 0
.....................................................................................................................ATTACTGTTCCCAACGC........................................................................................................................................ 17 2 14 0.07 1 1 0 0 0 0 0
....................................................................TCCAATCTGTCATCTT.......................................................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0
......................................................................................................................TTACTGTTCCCAACGC........................................................................................................................................ 16 2 20 0.05 1 1 0 0 0 0 0
....................................CAAAGGGCAGGGGCCA.......................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1
...................................................................................................................TGATTACTGTTCCCAACGC........................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12738944-12739213 + dsi_10255 TGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCC--CCGGTACAGC----AATTCATCATAAGATTATACAGTAGAAGTTCG-----------------------------------------------------------ATA-GATGAA--------------------------------------------------------------------------------------------------------------------------------------------------------ACACAAATTATGCATAG-----TCTAATGAAA---------TGGGTTGCGAGATATGTATAT--A--------------GG-----------------------------------------------------------------------A-AATATATCTTGT-----------------A-----TCTGACTGT--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----GT--CTAC-CTT---TTC-CATTGCAG----AATTGCACGAG--TTGAAGG---CGGATAAT--CGAA--TCGAACGAGAGAAG--CA------AAAC
droSec2 scaffold_1:9568581-9568855 + TGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCC--CCGGTACAGC----AATTCATCATAAGATTATACAGTAGAAGTTCG-----------------------------------------------------------ATA-GATGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCACAAATTATACATTGCTCGGTCTAATGAAA---------TGGATTGCGAGATATGTATAT--A--------------GG-----------------------------------------------------------------------A-AATATATCTTGT-----------------A-----TCTGACTGT--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----GT--CTAC-CTT---TTC-CATTGCAG----AATTGCACGAG--TTGAAGG---CGGAAAAT--CGAA--TCGAACGAGAGAAG--CA------AAAC
dm3 chr2R:12069261-12069537 + TGCTGGCATTTTTGGCATTTAGG-TTTTGCGAAACCAATTTCCTGTCC--CAGGTACATC----AAATCATCATATGATTATACAGTAGAAGTTCG-----------------------------------------------------------ATA-GATGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAAATTATACATAACTCTGTCTAACGAAA---------TGGTTTGCAAGATATGTATAT--A--------------GG-----------------------------------------------------------------------A-AATATATCTTGT-----------------A-----TCTGACTGT--------------GGTAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----GT--CTAC-CTT---TTC-CATTGCAG----AATTGCAAGAG--TTGAAGG---CGGATAAC--CGAATTGCGAACGAGAGAAG--CA------AAAC
droEre2 scaffold_4845:13788494-13788759 - GGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCT--CCGGCACAGA----GATTCATCA-----TTATACAGTAGCATTTCG-----------------------------------------------------------TTA-GACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCACAAATTACACATAATTCTCTATAATGAAA---------TGGATTTCAAAATA----TAT--A--------------GG-----------------------------------------------------------------------A-AATATATTATAT-----------------A-----TCTGACTGC--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGTACAC---------ATAT-TAAGT----GT--CCAC-CTT---TTC-CATTGCAG----AATTACACGAA--TTGAAGG---CGGAAAAT--CGAA--TCGAACGAGAGAAG--CA------AAAC
droYak3 2R:16913276-16913540 - TGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCT--CCAGCACAGC----GATTCATCA-----TTGTACAGTAGAATTTCC-----------------------------------------------------------GTA-GACGA---------------------------------------------------------------------------------------------------------------------------------------------------------CCACAAAATATACATAATTCTCTGTAATGAAA---------TGATTTTCGAGAAT----TAT--A--------------TG-----------------------------------------------------------------------A-AATATATCATAT-----------------A-----TAAGACTGC--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGTACAC---------ATAT-TAAGT----GT--CTAC-CTT---TTC-CATTGCAG----AATTACACGAA--TTGAAGG---CGGAAAAC--CGAA--TCGAACGAGAGAAG--CA------AAAC
droEug1 scf7180000409672:979405-979721 + CGTTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CCGGCAAAGC----AATTCATCATATGATTATACAGTAATACTTCG-----------------------------------------------------------ATA-GGCCAGATTTAAATAGC---------------TGAAAGGATTA----CAATTCTT-AGACA----AGAAATTATGAA-GTTTATGGCTAATGCAAATTTT-ATTTTTCTG-------CCGCCAA-------------------------------------------------------------------------------A---------------------------------ACAATTTTGTAACTTAACTTTT------------------------------------------------------------------------------------AATGTTTGAATGA--------------GAATAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTATCC---------CAAT-TAAAT----GT--CTAT-CTA---TTC-TCTTGCAG----AATTGCACGAA--TTGACGG---CAGAAACC--CGAA--TCGAACGAGAGCAG--CA------AAAC
droBia1 scf7180000301754:2418658-2418949 + CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--TCAACGCAGC----AATTCATCAT--------ACAGTGAAACATCA-----------------------------------------------------------ATA-GACGATTTTTAGATGGATTAAGAGAATTGTAGTTAAAGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AATAT---TTGT-----------------AA----TA------------------------------C----------------------------ACCAAAGTGAACGTTAGAAACAAATTTAATTACCATTCCAAT-----------A---GCTTGAATTTTTAAAAAGATGAGATTTATTAACT-----------------------------------------------------------------------------AT----TT--GTAC-ATT---TCC-CATTGCAG----AATTGCACGAA--CTGAAGC---CGGTGAAA--CGAA--TCAAACGAGAGCAGTGCA------AAAC
droTak1 scf7180000415795:485323-485625 - CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CCGTCCCAGC----AATTCATCATATGATTATACAGTACAACATCG-----------------------------------------------------------ATA-AAATAATTTAGTATGAA---------------TTAAAGGATAA----CAATTCAC-AAAAA---------------------------------------------------------------------------------------------------------------------------------------------AA---------------------------------GAAAAGATTTTTAAT----TTGAATGCATATTTTTACATTTAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGATGGTGATGATGGA---GCTT---TTTTT------------------------------------A-TAA----------------------------------------AATATTTAACTCAT-TTTAT----AT--CCAC-TTT---TCT-CATTGCAG----AATTGCACGAA--TCGAAGG---CGGTAAAA--CGAA--TCAAACGAGAGCAGCGCA------AAAC
droEle1 scf7180000491107:1088513-1088900 + CGCTTGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CTTGCACAGC----AATTCATCAAATGATTATACAGTCAAACTCCGCA---------------------------------------------------------ATA-GTTGATTTTT---------------------------------------------------------------------------------------------TAAACTG-------CTG-------------------------------------------------------------------AAA---------TAAAT------------ATATCAAAGAAAAGCAGAAAAGCAAAGT-------------------------------TTGAAG-----------------------AAATAGT-------------------------------------T-AAATTA--------------GAAAA----CAGAAAGAATCATACAATTTGACTTGATACCCAA--------------------------ATCATTCAAAT-----------AGGGGCCTAAATATTTAA---------ATTTTCTAACTAAATGTTGCATAGTAATAAAAAACCATGGCAGAACGAAATATTAAAGTAATACAGTAACT---------TTGT-TTGTT----GT--CTAC-TTT---TTT-CATTGCAG----AATTGAACGAA--TTGAAGA---CCGTAAAC--CCAA--TCGAACGAGAGCAG--CA------AAAC
droRho1 scf7180000779911:20063-20417 - CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CTAGCATAGC----AATTCATCATATGATTATACAGTCAAGCCTCGCTTTTTTAAATTTGGTCAAAATTATAAAATTATAACAAACTTATAAAATTTGGTGTCTT------TTAA-----------TACAA--AATTG----------------------------------------------------------------------CTAGC-CTTTATTAAACCCAGAAAATAACTTTATATATAAATAAATTTATGAAAAAAA-AAAAAATAGA-------------------AAATGATAACACATG--------------------------------------------------------------------------------------------------------ATGGA-------------------------------------TCGAATAA--------------GAGAAGTAA---------------------------------------A----------------------------------------------------------------------------------------------------------------------------------ACTTTTCCCC---------CTAA--TGTT----CT--CTTC-CTT---TCC-TATTGCAG----AATTGAACGAA--TCGAAGA---CGGTAAAC--CCAA--TCGAACGAGAGCAG--CA------AAAC
droFic1 scf7180000453948:1317054-1317393 + CGCTGGCATTTTTGGCATTTAAC-T-TTGCGAAACCAATTTCCTGTCT--CCGGCTTAGC----AATTCATCATATGATTGTACAGTATGACTTCA-----------------------------------------------------------CAAAGGTGG-A----------TTAGGAA--------GGAAAGGACTATAAACTATTCAATTGAGTCTGAAC-AATTTTTTAGTTTTT----------------T-------------------------------------------GGTTATTCCAAACAACCTTAAAACA-------------------AAATAAGGCCCTCGGAA--------------------------------------------------------------------------------------------------------GAACATTTC---TTGAAGTCATTTTATTGGCTTATTATGCTTTTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAAGTAC--------------------------CATTGCACGT----------TTT-TTAAT----GT--ATAC-ATG---TTT-TATTGCAG----AATTTCACGAA--TTGAAGG---CGGTAAAC--CGAA--TCGAACGAGAAAAG--CA------AAAC
droKik1 scf7180000302682:1304039-1304362 - CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CCGGCACAGC-AGTAATTCATCA-----TTATACAGTCCTACGTCT-----------------------------------ATAACTTGAACTTTGAGAAGCT-------------------------------------------------------------------------------------------------GCATATTCT-CTCATTCTATTAAACTCTGCAAA-------------------------------------------------------------------------------A---------------------------------TAAAAGTTGTTTATTATTTTTTTATG--TTATGTTAAATTGAAGATCAATTCGAAACTTGTAATCATAGATAGT-------------------------------------TCAAACTA--------------GAAAA----C----------------------------CCCACA-----------------------------------------------------------------------------------------------------------------------------------------GTGTGCAT---------ATAT-TTAAC----GCCTCTAC-CTC---TTTCATTTGCAG----AATTGCACGAA--TTGAAAG---CGGTAAAC--CGAA--TCGAACGAGAGCAG--AC------TAAC
droAna3 scaffold_13266:7845002-7845306 - CGCTGGCATTTTTGGCATTTAGCCTTTTGCGAAACCAATTTCCTGTCT--CCAGCTCTGC----AATTCATCATAGAGCTCCGCTGATCA-----------------------------------------GCAACTTGAACAACTTGAAGCCTCAAT-GTCGAA-----------TTCCA--AATTG----------------------------------------------------------------------T-------------------------------------------ATTTATGACAAAAAAAAAAAAAAGC-------------------AAACACCACCAGCGGAT--------------------------------------------------------------------------------------------------------GGACAATAT---TTGT-----------------AT----TATAATTCCATTTAGGGTTAAAGGGAAAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACC---------------ATTTTTAATC----GCCTCTCT-CCT---CTC-CATTGCAG----AACTGCACGAA--CTGAAGG---CGGTTGAACCAAAA--TCGAACGAGAGCAG--CA------AAAA
droBip1 scf7180000396759:980485-980741 + CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCTCTCCAGCTTGGCTGGCAATTCATCATAGAATAGAACTG--GAAATTCC-----------------------------------------------------------AAT-GTCGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAACATCACCAGCGGAT---------------------------------GA-----------------------------------------------------------------------A-AATAT---TTGT-----------------AT----TCTAATTGCAGCTAGAGTTAAGGGGAAAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACTACC---------TTAT-TAAAT---CGC--CCCT-CTC---CTC-CATTGCAG----AACTGCACGAA--CTGAAGG---CGGTAAAC--CAAA--TCGAACGAGAGCAG--CA------TTAA
dp5 3:4276557-4276707 - CTTTGGCATTTTTGTCATTTAAC-TTTTGCGAAACTAATTTCCTGTTT--CCAGTATAGA----AATACTTCATACATGTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACATAT--ATTT-TTT---TTG-CATTGCAG----AACTGCACGAA--TTGAAAA---CGGAAAAA--GCGA--CCAAAAAAGACCAG---A------AAAC
droPer2 scaffold_2:4465049-4465146 - AGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTCATAC---------ATGT-GCAAAACTTAT--ATTTTTTT---TTG-CATTGCAG----AACTGCACGAA--TTGAAAA---CGGAAAAA--GCGA--CCAAAAAAGACCAG---A------AAAC
droWil2 scf2_1100000004558:445493-445559 - TC-----------------------------------------TGTCT--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGAG--AAGTGCAAGGGAAGTGAAGG---CGGCAAAC--AAAG--TCGAAA-ACAGCAG--CA------GCAC
droVir3 scaffold_12875:4413584-4413651 + CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---TTT-CTCTGCAG----CATTGCACAAG--CAGGCAG---CAACAAAT--CGAG--GCAAACAGCAAAAG--AA---TTGAAGC
droMoj3 scaffold_6496:13253292-13253365 + TGTTTCC------------------------------------TCTCT--C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGCA-------GTGCACTAG--AAGACGGCAGCAACAAAT--CGAG--GCATAAAGCAACAG--AA---TTGAAGC
droGri2 scaffold_15112:1841822-1841905 - TGTGTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-CTTTGGTTT-CTTTGCAGCATTTATTGCACAAG--AAGAAGG---CAGCAA-C--AAAT--TAAAGCAATAGCAG--AAAAAT---TTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCC--CCGGTACAGC----AATTCATCATAAGATTATACAGTAGAAGTTCG-----------------------------------------------------------ATA-GATGAA--------------------------------------------------------------------------------------------------------------------------------------------------------ACACAAATTATGCATAG-----TCTAATGAAA---------TGGGTTGCGAGATATGTATAT--A--------------GG-----------------------------------------------------------------------A-AATATATCTTGT-----------------A-----TCTGACTGT--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----GT--CTAC-CTT---TTC-CATTGCAG----AATTGCACGAG--TTGAAGG---CGGATAAT--CGAA--TCGAACGAGAGAAG--CA------AAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAT--CGAA--TCGAACGAGAGA................2711.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTGAAGG---CGGATAAT--CGAA--TCGA........................2411.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCACGAG--TTGAAGG---CGGATAAT--..................................2611.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG--TTGAAGG---CGGATAAT--CGAA--TC..........................2411.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGG---CGGATAAT--CGAA--TC..........................2111.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCACGAG--TTGAAGG---CGGATAA.....................................2511.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCAG----AATTGCACGAG--TTGAAGG---C...........................................2711.00100010000000000000
................................................................................ATACAGTAGAAGTTCG-----------------------------------------------------------ATA-GATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAT--CGAA--TCGAACGAGA..................1911.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAT--CGAA--TCGAACGAGAG.................2311.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAT--CGAA--TCGAACGA....................2311.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGG---CGGATAAT--CGAA--TCGAACGAGA..................2711.00101000000000000000
droSec2
TGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCC--CCGGTACAGC----AATTCATCATAAGATTATACAGTAGAAGTTCG-----------------------------------------------------------ATA-GATGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCACAAATTATACATTGCTCGGTCTAATGAAA---------TGGATTGCGAGATATGTATAT--A--------------GG-----------------------------------------------------------------------A-AATATATCTTGT-----------------A-----TCTGACTGT--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----GT--CTAC-CTT---TTC-CATTGCAG----AATTGCACGAG--TTGAAGG---CGGAAAAT--CGAA--TCGAACGAGAGAAG--CA------AAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG--TTGAAGG---CGGAAAAT--CGA...............................2111.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCACGAG--TTGAAGG---CGGA........................................2211.0010010
dm3
TGCTGGCATTTTTGGCATTTAGG-TTTTGCGAAACCAATTTCCTGTCC--CAGGTACATC----AAATCATCATATGATTATACAGTAGAAGTTCG-----------------------------------------------------------ATA-GATGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAAATTATACATAACTCTGTCTAACGAAA---------TGGTTTGCAAGATATGTATAT--A--------------GG-----------------------------------------------------------------------A-AATATATCTTGT-----------------A-----TCTGACTGT--------------GGTAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----GT--CTAC-CTT---TTC-CATTGCAG----AATTGCAAGAG--TTGAAGG---CGGATAAC--CGAATTGCGAACGAGAGAAG--CA------AAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAC--CGAATTGCGAACGA....................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC--CGAATTGCGAACGAGAGAAG--C...........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAC--CGAATTGCGAACG.....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAC--CGAATTGCGAACGA....................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAC--CGAATTGCGAACG.....................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAAGAG--TTGAAGG---CGGATAAC--C.................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGGATAAC--CGAATTGCGAACGAGA..................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGGATAAC--CGAATTGCGAACGAG...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAC--CGAATTGCGAACGAGAGAAG--............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAC--CGAATTGCGAACGAGAGA................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCGAACGAGA..................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCGAAC......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGGATAAC--CGAATTGCGAACGA....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGG---CGGATAAC--CGAATTGCGAACGAG...................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAC--CGAATTGCGAACGAGA..................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAC--CGAATTGCGAACGAG...................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCGAACGA....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCGAACGAGAGAAG--C...........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAG--TTGAAGG---CGGATAAC--C.................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCGAACGAG...................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGAG--TTGAAGG---CGGAT.......................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................................................CCAAAAATTATACATAACTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAG--TTGAAGG---CGGATA......................................1811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAGAG--TTGAAGG---CGGATAAC--CG................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCGAACGAGAGAAG--CA------AA..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT----GT--CTAC-CTT---TTC-CATTGCAG----...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGG---CGGATAAC--CGAATTGCGAACGAGA..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAAGAG--TTGAAGG---C...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCGAACGAGAGA................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CCAATTTCCTGTCC--CAGGTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAG--TTGAAGG---CGGAT.......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGGATAAC--CGAATTGCGAACGAGAGA................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAGAG--TTGAAGG---CGGATAAC--CGAA..............................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG----AATTGCAAGAG--TTGAAGG---............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC--CGAATTGCGAACGAGA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTGAAGG---CGGATAAC--CGAATTGCGAAC......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCGAACG.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAC--CGAATTGCGAA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAG--TTGAAGG---CGGA........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGAACGAGAGAAG--CA------....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAC--CGAATTGCGAACGAGA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATATATCTTGT-----------------A-----TCTGACTGT--------------GG....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-----------------A-----TCTGACTGT--------------GGTAAG................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-T..........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAC--CGAATTGCGA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGG---CGGATAAC--CGAATTGCGAACGAG...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAG--TTGAAGG---CGGATAAC--CGAAT.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTGAAGG---CGGATAAC--CGAATT............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAC--CGAATTGCGAAC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-----------------A-----TCTGACTGT--------------GGTAAGA...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGAG--TTGAAGG---CGGATAAC--CGAA..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAC--CGAATTGCGAACGAGA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCG.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGGATAAC--CGAATTGCGAACGAGAG.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAC--CGAATTGCGAACGA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAC--CGAATTGCGAACGAGAGAA...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAC--CGAATTGCGAACGAGAGA................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAAGAG--TTGAAGG---............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGATAAC--CGAATTGCGAACGAGAGAA...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAG--TTGAAGG---CGGATA......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---CGGATAAC--CGAATTGCGAACGAG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTACAC---------ATAT-TGAAT----..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----TCTGACTGT--------------GGTAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----TCTGACTGT--------------GGTAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGT.............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAACGAGAGAAG--CA------AGG.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAC--CGAATTGCGAACGAG...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTGCGAAACCAATTTCCTGTCC--CAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--CGAATTGCGAACGAGAGAA...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
droEre2
GGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCT--CCGGCACAGA----GATTCATCA-----TTATACAGTAGCATTTCG-----------------------------------------------------------TTA-GACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCACAAATTACACATAATTCTCTATAATGAAA---------TGGATTTCAAAATA----TAT--A--------------GG-----------------------------------------------------------------------A-AATATATTATAT-----------------A-----TCTGACTGC--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGTACAC---------ATAT-TAAGT----GT--CCAC-CTT---TTC-CATTGCAG----AATTACACGAA--TTGAAGG---CGGAAAAT--CGAA--TCGAACGAGAGAAG--CA------AAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAT--CGAA--TCGAACGAGA..................1911.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAAGT----GT--CCAC-CTT---TTC-CATTGCAG----...................................................................2611.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACACGAA--TTGAAGG---CGG.........................................2011.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACGAA--TTGAAGG---CGGAAAAT--CGA...............................2711.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGG---CGGAAAAT--CGAA--TCGAACG.....................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAA--TCGAACGAGAGAAG--C...........1911.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TCGAACGAGAGAAG--CA------AAAC2111.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--CGAA--TCGAACGAGAGAAG--CA------A...2411.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT--CGAA--TCGAACGAGAGA................2011.0010000100
droYak3
TGCTGGCATTTTTGGCATTTAAG-TTTTGCGAAACCAATTTCCTGTCT--CCAGCACAGC----GATTCATCA-----TTGTACAGTAGAATTTCC-----------------------------------------------------------GTA-GACGA---------------------------------------------------------------------------------------------------------------------------------------------------------CCACAAAATATACATAATTCTCTGTAATGAAA---------TGATTTTCGAGAAT----TAT--A--------------TG-----------------------------------------------------------------------A-AATATATCATAT-----------------A-----TAAGACTGC--------------GGGAAGAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTGTACAC---------ATAT-TAAGT----GT--CTAC-CTT---TTC-CATTGCAG----AATTACACGAA--TTGAAGG---CGGAAAAC--CGAA--TCGAACGAGAGAAG--CA------AAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAC--CGAA--TCGAACGAGAGAAG--CA------A...2514.00400000000004
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAAC--CGAA--TCGAACGAGA..................2112.00201000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGAA--TTGAAGG---CGGAAAAC--CGA...............................2511.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAC--CGAA--TCGAACGAGAGAAG--............2211.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGGAAAAC--CGAA--TCGAACGAGA..................2311.00100000010000
droEug1
CGTTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CCGGCAAAGC----AATTCATCATATGATTATACAGTAATACTTCG-----------------------------------------------------------ATA-GGCCAGATTTAAATAGC---------------TGAAAGGATTA----CAATTCTT-AGACA----AGAAATTATGAA-GTTTATGGCTAATGCAAATTTT-ATTTTTCTG-------CCGCCAA-------------------------------------------------------------------------------A---------------------------------ACAATTTTGTAACTTAACTTTT------------------------------------------------------------------------------------AATGTTTGAATGA--------------GAATAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTATCC---------CAAT-TAAAT----GT--CTAT-CTA---TTC-TCTTGCAG----AATTGCACGAA--TTGACGG---CAGAAACC--CGAA--TCGAACGAGAGCAG--CA------AAACSizeHit CountTotal NormTotal
No Reads
droBia1
CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--TCAACGCAGC----AATTCATCAT--------ACAGTGAAACATCA-----------------------------------------------------------ATA-GACGATTTTTAGATGGATTAAGAGAATTGTAGTTAAAGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AATAT---TTGT-----------------AA----TA------------------------------C----------------------------ACCAAAGTGAACGTTAGAAACAAATTTAATTACCATTCCAAT-----------A---GCTTGAATTTTTAAAAAGATGAGATTTATTAACT-----------------------------------------------------------------------------AT----TT--GTAC-ATT---TCC-CATTGCAG----AATTGCACGAA--CTGAAGC---CGGTGAAA--CGAA--TCAAACGAGAGCAGTGCA------AAACSizeHit CountTotal NormTotal
No Reads
droTak1
CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CCGTCCCAGC----AATTCATCATATGATTATACAGTACAACATCG-----------------------------------------------------------ATA-AAATAATTTAGTATGAA---------------TTAAAGGATAA----CAATTCAC-AAAAA---------------------------------------------------------------------------------------------------------------------------------------------AA---------------------------------GAAAAGATTTTTAAT----TTGAATGCATATTTTTACATTTAAGAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGATGGTGATGATGGA---GCTT---TTTTT------------------------------------A-TAA----------------------------------------AATATTTAACTCAT-TTTAT----AT--CCAC-TTT---TCT-CATTGCAG----AATTGCACGAA--TCGAAGG---CGGTAAAA--CGAA--TCAAACGAGAGCAGCGCA------AAACSizeHit CountTotal NormTotal
No Reads
droEle1
CGCTTGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CTTGCACAGC----AATTCATCAAATGATTATACAGTCAAACTCCGCA---------------------------------------------------------ATA-GTTGATTTTT---------------------------------------------------------------------------------------------TAAACTG-------CTG-------------------------------------------------------------------AAA---------TAAAT------------ATATCAAAGAAAAGCAGAAAAGCAAAGT-------------------------------TTGAAG-----------------------AAATAGT-------------------------------------T-AAATTA--------------GAAAA----CAGAAAGAATCATACAATTTGACTTGATACCCAA--------------------------ATCATTCAAAT-----------AGGGGCCTAAATATTTAA---------ATTTTCTAACTAAATGTTGCATAGTAATAAAAAACCATGGCAGAACGAAATATTAAAGTAATACAGTAACT---------TTGT-TTGTT----GT--CTAC-TTT---TTT-CATTGCAG----AATTGAACGAA--TTGAAGA---CCGTAAAC--CCAA--TCGAACGAGAGCAG--CA------AAACSizeHit CountTotal NormTotal
No Reads
droRho1
CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CTAGCATAGC----AATTCATCATATGATTATACAGTCAAGCCTCGCTTTTTTAAATTTGGTCAAAATTATAAAATTATAACAAACTTATAAAATTTGGTGTCTT------TTAA-----------TACAA--AATTG----------------------------------------------------------------------CTAGC-CTTTATTAAACCCAGAAAATAACTTTATATATAAATAAATTTATGAAAAAAA-AAAAAATAGA-------------------AAATGATAACACATG--------------------------------------------------------------------------------------------------------ATGGA-------------------------------------TCGAATAA--------------GAGAAGTAA---------------------------------------A----------------------------------------------------------------------------------------------------------------------------------ACTTTTCCCC---------CTAA--TGTT----CT--CTTC-CTT---TCC-TATTGCAG----AATTGAACGAA--TCGAAGA---CGGTAAAC--CCAA--TCGAACGAGAGCAG--CA------AAACSizeHit CountTotal NormTotal
No Reads
droFic1
CGCTGGCATTTTTGGCATTTAAC-T-TTGCGAAACCAATTTCCTGTCT--CCGGCTTAGC----AATTCATCATATGATTGTACAGTATGACTTCA-----------------------------------------------------------CAAAGGTGG-A----------TTAGGAA--------GGAAAGGACTATAAACTATTCAATTGAGTCTGAAC-AATTTTTTAGTTTTT----------------T-------------------------------------------GGTTATTCCAAACAACCTTAAAACA-------------------AAATAAGGCCCTCGGAA--------------------------------------------------------------------------------------------------------GAACATTTC---TTGAAGTCATTTTATTGGCTTATTATGCTTTTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAAGTAC--------------------------CATTGCACGT----------TTT-TTAAT----GT--ATAC-ATG---TTT-TATTGCAG----AATTTCACGAA--TTGAAGG---CGGTAAAC--CGAA--TCGAACGAGAAAAG--CA------AAACSizeHit CountTotal NormTotal
No Reads
droKik1
CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCT--CCGGCACAGC-AGTAATTCATCA-----TTATACAGTCCTACGTCT-----------------------------------ATAACTTGAACTTTGAGAAGCT-------------------------------------------------------------------------------------------------GCATATTCT-CTCATTCTATTAAACTCTGCAAA-------------------------------------------------------------------------------A---------------------------------TAAAAGTTGTTTATTATTTTTTTATG--TTATGTTAAATTGAAGATCAATTCGAAACTTGTAATCATAGATAGT-------------------------------------TCAAACTA--------------GAAAA----C----------------------------CCCACA-----------------------------------------------------------------------------------------------------------------------------------------GTGTGCAT---------ATAT-TTAAC----GCCTCTAC-CTC---TTTCATTTGCAG----AATTGCACGAA--TTGAAAG---CGGTAAAC--CGAA--TCGAACGAGAGCAG--AC------TAACSizeHit CountTotal NormTotal
No Reads
droAna3
CGCTGGCATTTTTGGCATTTAGCCTTTTGCGAAACCAATTTCCTGTCT--CCAGCTCTGC----AATTCATCATAGAGCTCCGCTGATCA-----------------------------------------GCAACTTGAACAACTTGAAGCCTCAAT-GTCGAA-----------TTCCA--AATTG----------------------------------------------------------------------T-------------------------------------------ATTTATGACAAAAAAAAAAAAAAGC-------------------AAACACCACCAGCGGAT--------------------------------------------------------------------------------------------------------GGACAATAT---TTGT-----------------AT----TATAATTCCATTTAGGGTTAAAGGGAAAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACC---------------ATTTTTAATC----GCCTCTCT-CCT---CTC-CATTGCAG----AACTGCACGAA--CTGAAGG---CGGTTGAACCAAAA--TCGAACGAGAGCAG--CA------AAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCACGAA--CTGAAGG---C...........................................1812.002110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--CTGAAGG---CGGTTGAACCA.................................2112.002000002
......................................................................................................................................................GCCTCAAT-GTCGAA-----------TTCCA--AATTG----------------------------------------------------------------------T-------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAA--TCGAACGAGAGCAG--C...........2011.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACGAA--CTGAAGG---CGGTTG......................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................AAGC-------------------AAACACCACCAGCGGAT--------------------------------------------------------------------------------------------------------GGAC................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........................................................................ATAGAGCTCCGCTGATCA-----------------------------------------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAA--CTGAAGG---CGGTTGAACC..................................2311.001010000
droBip1
CGCTGGCATTTTTGGCATTTAAC-TTTTGCGAAACCAATTTCCTGTCTCTCCAGCTTGGCTGGCAATTCATCATAGAATAGAACTG--GAAATTCC-----------------------------------------------------------AAT-GTCGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAACATCACCAGCGGAT---------------------------------GA-----------------------------------------------------------------------A-AATAT---TTGT-----------------AT----TCTAATTGCAGCTAGAGTTAAGGGGAAAGTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACTACC---------TTAT-TAAAT---CGC--CCCT-CTC---CTC-CATTGCAG----AACTGCACGAA--CTGAAGG---CGGTAAAC--CAAA--TCGAACGAGAGCAG--CA------TTAASizeHit CountTotal NormTotal
No Reads
dp5
CTTTGGCATTTTTGTCATTTAAC-TTTTGCGAAACTAATTTCCTGTTT--CCAGTATAGA----AATACTTCATACATGTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACATAT--ATTT-TTT---TTG-CATTGCAG----AACTGCACGAA--TTGAAAA---CGGAAAAA--GCGA--CCAAAAAAGACCAG---A------AAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--TTGAAAA---CGGAAAAA--GC................................2012.0020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAA---CGGAAAAA--GCGA--CCAAAAAAGAC.................2911.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---CGGAAAAA--GCGA--CCAA........................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAA--TTGAAAA---CGGAAAAA--GCGA--............................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CGGAAAAA--GCGA--CCAAAAA.....................2111.0010000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGCACGAA--TTGAAAA---C...........................................1911.0010000000001
.......................................................ATAGA----AATACTTCATACATGTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A........................................................................................................2411.0010100000000
droPer2
AGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTCATAC---------ATGT-GCAAAACTTAT--ATTTTTTT---TTG-CATTGCAG----AACTGCACGAA--TTGAAAA---CGGAAAAA--GCGA--CCAAAAAAGACCAG---A------AAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGCACGAA--TTGAAAA---CGGA........................................2211.001010000
droWil2
TC-----------------------------------------TGTCT--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGAG--AAGTGCAAGGGAAGTGAAGG---CGGCAAAC--AAAG--TCGAAA-ACAGCAG--CA------GCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAAGG---CGGCAAAC--AAAG--TCGA........................2512.00200020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAAGGGAAGTGAAGG---CGGCA.......................................2412.00200200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAAC--AAAG--TCGAAA-ACAGCAG--C...........2511.00100010
.............................................TCT--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGAG--AAGTGCAAGG.........................................................2211.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGTGAAGG---CGGCAAAC--AAAG--T...........................2411.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAAGGGAAGTGAAGG---C...........................................2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAC--AAAG--TCGAAA-ACAGC................1911.00100010
droVir3
CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---TTT-CTCTGCAG----CATTGCACAAG--CAGGCAG---CAACAAAT--CGAG--GCAAACAGCAAAAG--AA---TTGAAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACAAG--CAGGCAG---CAACA.......................................2011.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--CGAG--GCAAACAGCAAAA...............1911.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--CGAG--GCAAACAGCAAAAG--AA---TTGAA..2711.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCACAAG--CAGGCAG---CAAC........................................2111.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT--CGAG--GCAAACAGCAAAAG--AA---TTGA...2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--CGAG--GCAAACAGCAAAAG--AA---TTGAAGC2811.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAG--GCAAACAGCAAAAG--AA---TTGA...2411.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
TGTTTCC------------------------------------TCTCT--C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGCA-------GTGCACTAG--AAGACGGCAGCAACAAAT--CGAG--GCATAAAGCAACAG--AA---TTGAAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAACAAAT--CGAG--GCATAAA.....................2411.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCAGCAACAAAT--CGAG--G...........................2111.001100000
droGri2
TGTGTGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-CTTTGGTTT-CTTTGCAGCATTTATTGCACAAG--AAGAAGG---CAGCAA-C--AAAT--TAAAGCAATAGCAG--AAAAAT---TTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 01:35 AM