ID:dsi_1023 |
Coordinate:3r:10576181-10576248 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
ATCGCCTGGTGGCCATGCATCAGAACCGCAGCAGTCTCAGCTCGCTGGGGGTAAGTAAATCACAAAAATAATCCCAGTGAAAACTATGTGACTAAACCATTATGTTACCCCATGATAGGTTCGATCGGAATCTATGGCCAGCGTTTATTCGGGCGCCGGAGAAGGTCG
**************************************************.................................((.............((((((......))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M024 male body |
M053 female body |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................ATTCGGGCGCCGGAGAGGGTCG | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................GCAGTCTCAGCTCGCTGGGGGTT................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................CGATCGGAATCTATGGCCAGC.......................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ................................................................................................................TGATAGGTTCGATCGGAATCTATGGC.............................. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................................GGGCGCCGGAGAGGG... | 15 | 1 | 13 | 0.38 | 5 | 0 | 0 | 0 | 3 | 2 |
| .................................GTCTCACCGGGCTGGGGGT.................................................................................................................... | 19 | 3 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 1 |
| .....................................................................................................................................ATCGCCAGGGTTGATTCGG................ | 19 | 3 | 16 | 0.06 | 1 | 0 | 0 | 0 | 1 | 0 |
|
TAGCGGACCACCGGTACGTAGTCTTGGCGTCGTCAGAGTCGAGCGACCCCCATTCATTTAGTGTTTTTATTAGGGTCACTTTTGATACACTGATTTGGTAATACAATGGGGTACTATCCAAGCTAGCCTTAGATACCGGTCGCAAATAAGCCCGCGGCCTCTTCCAGC
**************************************************.................................((.............((((((......))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ..........CCGGTACGTGGACGTGGCGTCG........................................................................................................................................ | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........CCGGTACGTGATCTTGG............................................................................................................................................. | 17 | 2 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................................................................ATGCCGGTCGCAAAT..................... | 15 | 1 | 11 | 0.09 | 1 | 0 | 0 | 1 | 0 |
| ...........................................................................................................................TAGGCTTAGATACCG.............................. | 15 | 1 | 15 | 0.07 | 1 | 0 | 1 | 0 | 0 |
| .............................................................................AGTTCTGATACACTGA........................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:45 AM