ID:

dsi_10210

 Coordinate:

2l:3227619-3227800 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.8 -24.7 -24.5

Flybase annnotation

exon [2l_3227801_3228091_-]; CDS [2l_3227801_3228091_-]; exon [2l_3227153_3227618_-]; CDS [2l_3227153_3227618_-]; intron [2l_3227619_3227800_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCGGAGGAGGAGCTGCAGGCGGAGGCGCCTGGTAGCAATGCTGGCGACAGGTAGGTGGGATCAGTGCTCCGGAAACTCTCCAGCCAGGCCTTGGTCCAATTCCGTAAGAGATCTCATCATCCTTCCAAATTTGCATGCCTAGTTCAAGAGTTTTTCCATTTAATCGAAGTAGCAGTAGTTCGGGGTGCCCAATTGAATCCGTGCTAACCTCGTTTCCTTCTACCATTCACAGGCGCGATTCAATCACCGAGGAGATCACGATAACGAGCACCACAAACAGCA
******************************************************************....(((((((((..(((.((((..((...(((......(((.(((......))))))......))))).)))).)))..)))))..)))).......((((.((....)).))))((((..........))))...******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR902008
ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body
....................................................................................................................................................................................CGGGGTGCCCAATTGAATCCGTG............................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................CTCCGGAAACTCTCCAGCCAGGCCT............................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................GGTAGCAATGCTGGCGACA......................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TCACGCAGGAGATCACGA..................... 18 2 3 1.00 3 0 0 0 0 2 0 0 0 1
..............................................ACAGGTAGGTGAGATGA........................................................................................................................................................................................................................... 17 2 10 0.70 7 0 0 0 7 0 0 0 0 0
.............................................CACAGGTAGGTGGGATGAGA......................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 1 0
...............................................CAGGTAGGTGGGATGAGA......................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 1 0 0 0
CCGGAGGAGGAGCTGCA......................................................................................................................................................................................................................................................................... 17 0 3 0.33 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................................CAGACGGGATCACGATAACGA............... 21 3 4 0.25 1 0 0 0 0 0 1 0 0 0
..............................................................AGTGCTCTGGAAAGTCTC.......................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 1 0 0
.....................................ACGCTGTCGCCAGGTAGGT.................................................................................................................................................................................................................................. 19 3 8 0.13 1 0 0 0 1 0 0 0 0 0
.............................................CACAGGTAGGTGGGA.............................................................................................................................................................................................................................. 15 1 10 0.10 1 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................................TCACGCAGGAGATCACGAG.................... 19 3 13 0.08 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................CACGCAGGAGATCACGA..................... 17 2 14 0.07 1 0 0 0 0 0 0 0 1 0
...............................................CTGGTAGGTCGGATCA........................................................................................................................................................................................................................... 16 2 18 0.06 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GGCCTCCTCCTCGACGTCCGCCTCCGCGGACCATCGTTACGACCGCTGTCCATCCACCCTAGTCACGAGGCCTTTGAGAGGTCGGTCCGGAACCAGGTTAAGGCATTCTCTAGAGTAGTAGGAAGGTTTAAACGTACGGATCAAGTTCTCAAAAAGGTAAATTAGCTTCATCGTCATCAAGCCCCACGGGTTAACTTAGGCACGATTGGAGCAAAGGAAGATGGTAAGTGTCCGCGCTAAGTTAGTGGCTCCTCTAGTGCTATTGCTCGTGGTGTTTGTCGT
*******************************************************************************....(((((((((..(((.((((..((...(((......(((.(((......))))))......))))).)))).)))..)))))..)))).......((((.((....)).))))((((..........))))...****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
.............................................................................................................CTAGAGTAGTCGAAAGTTTTA........................................................................................................................................................ 21 3 6 1.50 9 8 0 0 0 0 0 1 0
......................................................CACCCTAGTCACGAGGCCTTTGAGAGGT........................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................CGATCCTAGTCACGAGGCCTGT............................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................GATTGGACCAAAGGTAGAT............................................................ 19 2 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................GGAACTAGGTTAAGACCTTCT............................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 1 0 0 0 0
.......................................................................................................................AGGAAGGATTGAACGTAGGGA.............................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................AAGTGTCCGCGCTAGGGTG...................................... 19 3 7 0.29 2 0 0 0 0 0 1 0 1
.................................................................................................................................................ATCTCAAGAACGTAAATTAGC.................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................................................................................TCTCAAGAACGTAAATTA...................................................................................................................... 18 2 19 0.11 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................CTCACGGGTTGACTTAGG.................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 1 0
.........................................................................................................................................................AGGGTAGATGAGCTTCATC.............................................................................................................. 19 3 12 0.08 1 0 0 0 0 0 1 0 0
..........................................................................................................TCTCTAGAGTAGAAGA................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 1 0 0
...............................................................................GGTCGCTCCTGAACCAG.......................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0
.......................................................................................................................AGGAAGGTTTACAGGGACG................................................................................................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:3227569-3227850 - dsi_10210 CCG----GAGG------AGGAGCTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGATCT---------------------------------CAT-------C----------AT-C---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCAGTAGTTCGGGGTG------CC-CAATTGAAT----------------------------------------------------------CCG-----------------------------TGC----TAACCT-CG---T-TTCC-TTCTACCATTC--ACAGGCGCGATTCAATCACCGAGGAGATCACGATAACGAGCACCACA-------------------------------AACAGCA
droSec2 scaffold_5:1514799-1515080 - CCG----GAGG------AGGAGCTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTT-CGTAAGAGATCT---------------------------------CAT-------C----------AT-C---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTATT--CGAAGTAGCAGTAGTTCGGGGTG------CC-CAATTGAAT----------------------------------------------------------CCG-----------------------------TGC----TAACCT-CG---T-TTCC-TTCTACCATTC--ACAGGCGCGATTCGATCACCGAGGAGATCACGATAACGAGCACCACA-------------------------------AACAGCA
dm3 chr2L:3367670-3367953 - CCG----GAGG------AGGAGTTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCACCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAACT---------------------------------CAT-------C---C------ATTC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCAGTAGTTCGGGGTG------GC-CAGTTGAAT----------------------------------------------------------CCG-----------------------------TGC----TAACCT-CG---T-TTCC-TTGTACCATTC--ACAGGCGCGATTCGATTACCGAGGAGATCACGATAACGAGCACTACA-------------------------------AATAGCA
droEre2 scaffold_4929:3397636-3397921 - der_1251 CCG----GAGG------AGGAGAAGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---CG----------------AGC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATC---------------------------------CCT-----ATT---C------ATA----CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCAGTAGTTCGGAATG------CC-CCATTGAGT----------------------------------------------------------CCT-----------------------------TGC----TAATCT-CG---T-CTCC-TTTTACCA-TTTCACAGGCGCGATTCGATTACCGAGGAGATCACGATAACGAGCACCACA-------------------------------AACAGCA
droYak3 2L:3352414-3352697 - dya_211 CCG----GAGG------AGGAGAAGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAACT---------------------------------CAT-------C----------AATC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CAACGTAGCAGTAGTTCGGGGTG------AC-CACTTGAGT----------------------------------------------------------CCT-----------------------------TGC----TAATCT-CG---T-TTCCTTTTTGCCATTC--ACAGGCGCGATTCGATTACCGAGGAGATCACAATAACGAGCACCACA-------------------------------AACAGCA
droEug1 scf7180000409554:2728901-2729183 + CCG----GAGG------AGGAGAAGCAGGCGGATGCGG-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----CATGCTCCGGAAACTCTCCAGCCAGGC--GTTGGT-------CCAATTC-CGTAAGAGAATT---------------------------------AAT-------C----------ATACCCAATTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCTGTAGAC-TGATTA------TC-CACTTGAAT----------------------------------------------------------CCC-----------------------------AGC----TTATTT-T----C-CTCC-CCTTTCCT-TT--ACAGGCGCGATTCGATCACCGAGGAGATCACGATAACGAGCACCACC-------------------------------AACAGCA
droBia1 scf7180000301468:1162448-1162732 + CCGGAGG-AGG------AGGCGAAGCAGGCGGACGCGG-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----ACTGCTCCGGAAACTCTCCAGCCAGGC--TCGGGT-------CCGATTC-CGTAAGAGAATT---------------------------------CAT-------C----------ATAC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCA--------------------------ATTTAAT--CGACGTAGCTGTAGTT-GGAGTG------TC-CAGTTGAGC----------------------------------------------------------CGC-----------------------------CAA----TAACAT--G---TATTCC-CCTTACCAATT--GCAGGCGCGATTCGATCACCGAGGAGATCACCATAACGAGCACCACA-------------------------------AACAGTA
droTak1 scf7180000415914:750175-750460 + GAG----GAGG------AGAAACCGGATGCGGAGGCGG-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--TTGGGT-------CCAATTC-CGTAAGCGAATT---------------------------------CAT-------C----------GTAC---ATTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CAAAGTAGCTGTAGTT-GGAGTA------TC-CAAATGATC----------------------------------------------------------CAA-----------------------------TAT----TAACAA-TG---CATTCC-CTTTACCACTT--ACAGGCGCGATTCGATCACCGAGGAGATCACGATAACGAGCACCACCACA----------------------------AACAGCA
droEle1 scf7180000491046:2073740-2074028 - CCGGAGG-AGG------AGGAGGAGCAGGCGGAGCCG-----------------------------------------------G---------------TAGCTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCAAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATT---------------------------------CAT-------T----------ATTC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAATTAGCTGTAGTCGGGGCTA------TC-CAGTTGACT----------------------------------------------------------CGA---------------A-------------TAT----TAATAT-TT---T-TCGA-ACTTACCA-TT--GCAGGCGCGATTCGATCACCGAGGAGATCACGATCACTAGCACCACA-------------------------------AACAGTA
droRho1 scf7180000777227:217467-217746 - CCG----GTGG------AGGA---GCAGGCGGAGCCG-----------------------------------------------A---------------TAGCTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCAAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATT---------------------------------CTT-------C----------ATTC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CAAAGTAGATGTTGTT-GGAGGA------TC-CAGTTGAGT----------------------------------------------------------TGG-----------------------------TTT----TAAAAT--G---T-ACCC-CCTTACCA-TT--ACAGGCGCGATTCGATCACCGAGGAGATCACGATCACGAGCACCACA-------------------------------AACAGCA
droFic1 scf7180000453924:1348692-1348980 - CCG----AAGG------AGGAGGAGCAGGCGGAGGCG-----------------------------------------------G---------------CGGCTGGT---AGCAGTGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--GATGGT-------CCAATTC-CGTAAGAGAATT---------------------------------CAC-------C---C------GT-A---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGCTATAGTTGTAGTT-GGAGTG---CCATC-CAGTTGAGT----------------------------------------------------------CCT-----------------------------TGC----TAAATA-C----T-CTTT-CTCTGCCA-TT--GCAGGCGCGATTCGATCACCGAGGAGATCACGATCACGAGCACCACAACA----------------------------AATAGTA
droKik1 scf7180000302679:1472136-1472448 + CCG----GAGG------AGGAAC---TCACGGATGC-----------------------CAGGTCCGCTGAGAGGACA---ACGA---------------CTGCTGGT---AGCAATGGTG---------GCGACAGGTAGGTGTTTGG----------------GTC----AATGCTCCGGGAACTCTCCAGCCAGGC--CTTGGC-------CCAATTC-CGTAAGAGATTAAAA------------------------------CAT-------C---A------GTAC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC-----------------------C--ATTTAATCTCGGTGTAGATGTAGTC-GGCGGA------TT-AAACAGATC----------------------------------------------------------CCA---------------T-------------TAC----TAATTT-CA---T-TTCC-CATTGCCA-TT--ACAGGCGCGATTCCATCACCGAGGAGATCACGATTACGAGCACCACA-------------------------------AACGGCA
droAna3 scaffold_12916:13359499-13359800 + CCG----GAGGAGAAGGAGGAGAAGCAGGCGGATGC-----------------------CAAGTCCG------------------------------------ATGAG---AGCAGTGCTG---------GCGACAGGTAGGTG---AA----------------ATG-----ATGCTCCGGAAACTCTCCAGCCAGGC--CATGGT-------CGAATTC-CGTAAGAGGATC---------------------------------CAT-------T----------ACAGTTTTTTCAAAATTTGCATGCC----TAGTTCAAGAGTTCT---TCC-----------------------AAAATATAAC--CCACGTAGTCGTAGCCAAGAGCACCACCATC-----CCAGC----------------------------------------------------------CA--------------------------------CTAATTGGTAA-TA---C-TTGA-CTTGATCT-TT--GCAGGCGCGACTCCATCACCGAGGAGATCACGATTACGACCACCACC-------------------------------ACCACCA
droBip1 scf7180000396580:142638-142937 - CCGGAGG-AGA------AGGAGCAGCAGGCGGACGC-----------------------CAAGTCCG------------------------------------ATGAG---AGCAGTGCTG---------GCGACAGGTAGGTG---GAAGAAGGTG--------AAC----ACTGCTCCGGAAACTCTCAAGCCAGGC--CTTGGC-------GGAATTC-CGTAAGAGAATC---------------------------------CAT-------T----------ACAG---TTTCCAAATTTGCATGCC----TAGTTCAAGAGTTCT---TCC-----------------------A--ATATAAC--CCACGTAGTCGTAGCCCAGAGCA------CCCCAGGTCGTC----------------------------------------------------------CA--------------------------------CTAATTGTTAA-T------GCCC-GTGTGTCT-TT--GCAGGCGCGACTCCATCACTGAGGAGATCACGATTACGACCACCACC-------------------------------ACCACCA
dp5 4_group3:6200688-6201022 + GAG----GAGG------AGTATCCGGATCCGGAT--------CAGAGGATCGGAGAAGACAGGCCTGAGGAGAGGGCGGCCGCGG---------------CTTCTTGT---AGCAACGGTG---------GCGACAGGTAGGTG---GG----------------ATCATACAGTGCTCAGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATA---------------------------------CGT-------T---T------A------TTCCAAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAAAAAATCGA-----------------------------------------------------ATTAGTAGTTTAGATGGGACTTGGATGTGGAATCTA-----------------------------TAC----TTATTT-CGGGTC-TTCC-CCCTACCA-TT--GCAGGCGCGATTCCATCACCGAGGAGATCGTAATTACAACAACTACA-------------------------------A------
droPer2 scaffold_1:7693886-7694226 + CCG----CAGG------AGGAGGAGTATCCGGATCCGG--ATCAGAGGATCGGAGAAGACAGGCCTGAGGAGAGGGCGGCCGCGG---------------CTTCTTGT---AGCAACGGTG---------GCGACAGGTAGGTG---GG----------------ATCATACAGTGCTCAGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATA---------------------------------CGT-------T---T------A------TTCCAAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAAAAAATCTA-----------------------------------------------------ATTAGTTGTTTAGATGGGACTTGGATGTGGAATCTA-----------------------------TAC----TTATTT-CGGGTC-TTCC-CCCTACCA-TT--GCAGGCGCGATTCCATCACCGAGGAGATCGTAATTACAACAACTACA-------------------------------A------
droWil2 scf2_1100000006978:221-590 - CCG----GCGG------TGGGGCTGTCGGTGGTGTTGTTGGTG---------------------------ATA---AC---AATAATGATGGTGGTCAAGATGATGCT---AGTAATGCTGCTGATGCCGCTGACAGGTAGGTG---GAC--TGGTAG------ACTC----TAAGCTCAAGAAACTCTCCAGCCAGGCGGCTTGATGTGTGCACCAATTTGAGTAAGAT------------------------------GGAAT-GAATT--ATTTT---G------GTAC---AATCAAATTTCGCATGCC----TAGTTCAAGAGTTTTCTTTTT------------ACTGTTTTTCAAATATTTACC-----------CTTAGA-----------------CAAATGCCTCAATATTTGTAATCTAATTTAATTATATAT------------------------------------------------------------TGT----TATAT------------A-TTATGCAT-TT--ACAGGCGCGAATCCATCACCGAGGAGATAACCATTACAACTACAACAACT----------------------------AACAACA
droVir3 scaffold_12963:8177290-8177633 - dvi_10888 CAG----CAGC------AGCAGCTGGAAGCTGAGCCGG--ATG---------------------------AGA---AA---TGTA---------------CACAAAGTATACACAATAATG---------GCGACAGGTAGGTC---GA----------------AA-----AGCGCA------A--CTCTGGCCTGGT--CTAAAA-------CAAATGG-CAAAAAAAAATAAGAGAGAAGAGAGCGTTAAGTA----TAACCCGCATT--AGTTGG---CT----A-AT---GTACAAAATTTGCATGTCTT--TAGCGCAAGCACTTT---AAA--------TTTGAATGCATGC--C--ATATAAT--ATA--------------------------------------------------------------------------------------TATACACACTCCATAGATATTGCTGCGCCTTTTGAACAAGCTGGC----TATTCA-CA---G-TTTT-CTCTCTTG-TT--TTAGGCGCGATTCGATCAGCGATGACAACACAATCAACAGCAGCACA--------------------------------------
droMoj3 scaffold_6500:789767-790126 - GTG----GAAG------CTGAACAGGATGATAAATAT-----------------------------------------------A---------------TACAAAGT---AGCAATCAAG---------CTGAAAGGTAGGTA---AAC--TT--TGAATCGAAATC----AAGACTCGAGA----CTCGAGACAGACACCTCGG---------TAACTG-GGCAAACG-------------------TTAAGTATATTTAAACCGCTTTCTATTTGA---CT----ATCC---ATACGAAATTAGCATGCATTTGTAGTAGAAGCTCCTC---TGC----------------------------ACCAC--CAACACACATTTA-----------------------------------------------------CATGGTCGTTTATATAG----------------------------ATTCGATCTCTGCTACAGACAGC----CACTAAATA---A----A-TTGCTTTG-TT--TTAGGCGAGATTCGATTGGCGATGACATCACGAGCGCAACAACAACTACCACAG-CAACTGCAGCAACAAACAGCTTCAACGGCA
droGri2 scaffold_15252:7588012-7588346 - CAG----AAGC------TGGAAGCTGAACAGGAT--------G---------------------------ATAATAAA---TCCA---------------CACATAGT---AGCAATAATG---------GTGACAGGTAGGTGATCAG----------------CTC----ACAACTCTTGCCACAGTCCGACCAGCC--AGA----------------------AACG-------------------TTAAGTA--TTTAAGCTGCATTC--ATTTTTCGATTCACACAACTTGTACAAAATTTGCATGCCTT-CTAGTTCAACATGTTC---TGCACTATAAAT------------------TCTAAA--CTAAAGAAAAGAA-----------------------------------------------------AATATCGATTTATAAT----ATGTAT-------ATA--GACAT-AA---------TG--------AGC--------------------AA-CTCTCTTG-TT--TTAGGCGAGATTCCATCTGTGATGAAATCACAATCACAACTACAACTACTACTGGCAAC-------------------AGCAACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCG----GAGG------AGGAGCTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGATCT---------------------------------CAT-------C----------AT-C---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCAGTAGTTCGGGGTG------CC-CAATTGAAT----------------------------------------------------------CCG-----------------------------TGC----TAACCT-CG---T-TTCC-TTCTACCATTC--ACAGGCGCGATTCAATCACCGAGGAGATCACGATAACGAGCACCACA-------------------------------AACAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................CGGGGTG------CC-CAATTGAAT----------------------------------------------------------CCG-----------------------------TG..........................................................................................................................2311.00100000000000100000
................................................................................................................................................................................CTCCGGAAACTCTCCAGCCAGGC--CT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.........................................................................................................GGT---AGCAATGCTG---------GCGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
CCG----GAGG------AGGAGCTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.33100000000001000000
droSec2
CCG----GAGG------AGGAGCTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTT-CGTAAGAGATCT---------------------------------CAT-------C----------AT-C---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTATT--CGAAGTAGCAGTAGTTCGGGGTG------CC-CAATTGAAT----------------------------------------------------------CCG-----------------------------TGC----TAACCT-CG---T-TTCC-TTCTACCATTC--ACAGGCGCGATTCGATCACCGAGGAGATCACGATAACGAGCACCACA-------------------------------AACAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAGGAGATCACGATAACGA..............................................2311.0010100
.....................................................................................................................GCTG---------GCGACAGGTAGGTG---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCGATTCGATCACCGAGG.............................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGATCACGATAACGAGCACC.........................................2311.0010100
dm3
CCG----GAGG------AGGAGTTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCACCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAACT---------------------------------CAT-------C---C------ATTC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCAGTAGTTCGGGGTG------GC-CAGTTGAAT----------------------------------------------------------CCG-----------------------------TGC----TAACCT-CG---T-TTCC-TTGTACCATTC--ACAGGCGCGATTCGATTACCGAGGAGATCACGATAACGAGCACTACA-------------------------------AATAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................CACCGGAAACTCTCCAGCCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GTTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCGAGGAGATCACGATAA.................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
..................GGAGTTGCAGGCGGAGGCGC-----------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGCACTACA-------------------------------AATAGC.1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000
................................AGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCTG---------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................GCATGCC----TAGTTCAAGAG............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................TTGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTC---CTTCCAAATTTGCAT..............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCG----GAGG------AGGAGTTGCAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................G---------GCGACAGGTAGGTG---GG----------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CG----GAGG------AGGAGTTGCAGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GGGGTG------GC-CAGTTGAAT----------------------------------------------------------CCG-----------------------------............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGATCACGATAACGG..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................GCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACGAGCACTACA-------------------------------AATA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACGAGCACTACA-------------------------------AATAGC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTACCGAGGAGATCACGA....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................GAGTTGCAGGCGGAGGCGC-----------------------------------------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACGATAACGAGCACTA........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................CCAATTC-CGTAAGAGAACT---------------------------------C........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................GTG---GG----------------ATC----AGTGCACCGGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GGT---AGCAATGCTG---------GCGACAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................ATGCTG---------GCGACAGGTAGGTG---G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................TGGT---AGCAATGCTG---------GCGACAGGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCGATTACCGAGGAGAT.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................AGGAGTTGCAGGCGGAGGCGC-----------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...............................GAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
CCG----GAGG------AGGAGAAGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---CG----------------AGC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATC---------------------------------CCT-----ATT---C------ATA----CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCAGTAGTTCGGAATG------CC-CCATTGAGT----------------------------------------------------------CCT-----------------------------TGC----TAATCT-CG---T-CTCC-TTTTACCA-TTTCACAGGCGCGATTCGATTACCGAGGAGATCACGATAACGAGCACCACA-------------------------------AACAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................GC----AGTGCTCCGGAAACTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.0021000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCT-CG---T-CTCC-TTTTACCA-TTTCACAA.................................................................................2811.0010000010
........AGG------AGGAGAAGCAGGCGGAGGCGC-----------------------------------------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACGATAACGAGCACCAC.......................................2011.0010000100
...................GAGAAGCAGGCGGAGGCGC-----------------------------------------------------------------CTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACGAGCACCACA-------------------------------AACAGC.2211.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACCGAGGAGATCACGAT...................................................2111.0010000010
droYak3
CCG----GAGG------AGGAGAAGCAGGCGGAGGCGC-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAACT---------------------------------CAT-------C----------AATC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CAACGTAGCAGTAGTTCGGGGTG------AC-CACTTGAGT----------------------------------------------------------CCT-----------------------------TGC----TAATCT-CG---T-TTCCTTTTTGCCATTC--ACAGGCGCGATTCGATTACCGAGGAGATCACAATAACGAGCACCACA-------------------------------AACAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAACGAGCACCACA-------------------------------AACA...2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACCGAGGAGATCACAAT...................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCGATTCGATTACCG................................................................1811.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCGATTCGATTACCGAG..............................................................2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGATTCGATTACCGAGGA............................................................2011.00100000010000
droEug1
CCG----GAGG------AGGAGAAGCAGGCGGATGCGG-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----CATGCTCCGGAAACTCTCCAGCCAGGC--GTTGGT-------CCAATTC-CGTAAGAGAATT---------------------------------AAT-------C----------ATACCCAATTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAGTAGCTGTAGAC-TGATTA------TC-CACTTGAAT----------------------------------------------------------CCC-----------------------------AGC----TTATTT-T----C-CTCC-CCTTTCCT-TT--ACAGGCGCGATTCGATCACCGAGGAGATCACGATAACGAGCACCACC-------------------------------AACAGCASizeHit CountTotal NormTotal
No Reads
droBia1
CCGGAGG-AGG------AGGCGAAGCAGGCGGACGCGG-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----ACTGCTCCGGAAACTCTCCAGCCAGGC--TCGGGT-------CCGATTC-CGTAAGAGAATT---------------------------------CAT-------C----------ATAC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCA--------------------------ATTTAAT--CGACGTAGCTGTAGTT-GGAGTG------TC-CAGTTGAGC----------------------------------------------------------CGC-----------------------------CAA----TAACAT--G---TATTCC-CCTTACCAATT--GCAGGCGCGATTCGATCACCGAGGAGATCACCATAACGAGCACCACA-------------------------------AACAGTASizeHit CountTotal NormTotal
No Reads
droTak1
GAG----GAGG------AGAAACCGGATGCGGAGGCGG-----------------------------------------------------------------CTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--TTGGGT-------CCAATTC-CGTAAGCGAATT---------------------------------CAT-------C----------GTAC---ATTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CAAAGTAGCTGTAGTT-GGAGTA------TC-CAAATGATC----------------------------------------------------------CAA-----------------------------TAT----TAACAA-TG---CATTCC-CTTTACCACTT--ACAGGCGCGATTCGATCACCGAGGAGATCACGATAACGAGCACCACCACA----------------------------AACAGCASizeHit CountTotal NormTotal
No Reads
droEle1
CCGGAGG-AGG------AGGAGGAGCAGGCGGAGCCG-----------------------------------------------G---------------TAGCTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCAAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATT---------------------------------CAT-------T----------ATTC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAATTAGCTGTAGTCGGGGCTA------TC-CAGTTGACT----------------------------------------------------------CGA---------------A-------------TAT----TAATAT-TT---T-TCGA-ACTTACCA-TT--GCAGGCGCGATTCGATCACCGAGGAGATCACGATCACTAGCACCACA-------------------------------AACAGTASizeHit CountTotal NormTotal
No Reads
droRho1
CCG----GTGG------AGGA---GCAGGCGGAGCCG-----------------------------------------------A---------------TAGCTGGT---AGCAATGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCAAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATT---------------------------------CTT-------C----------ATTC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CAAAGTAGATGTTGTT-GGAGGA------TC-CAGTTGAGT----------------------------------------------------------TGG-----------------------------TTT----TAAAAT--G---T-ACCC-CCTTACCA-TT--ACAGGCGCGATTCGATCACCGAGGAGATCACGATCACGAGCACCACA-------------------------------AACAGCASizeHit CountTotal NormTotal
No Reads
droFic1
CCG----AAGG------AGGAGGAGCAGGCGGAGGCG-----------------------------------------------G---------------CGGCTGGT---AGCAGTGGTG---------GCGACAGGTAGGTG---GG----------------ATC----AGTGCTCCGGAAACTCTCCAGCCAGGC--GATGGT-------CCAATTC-CGTAAGAGAATT---------------------------------CAC-------C---C------GT-A---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGCTATAGTTGTAGTT-GGAGTG---CCATC-CAGTTGAGT----------------------------------------------------------CCT-----------------------------TGC----TAAATA-C----T-CTTT-CTCTGCCA-TT--GCAGGCGCGATTCGATCACCGAGGAGATCACGATCACGAGCACCACAACA----------------------------AATAGTASizeHit CountTotal NormTotal
No Reads
droKik1
CCG----GAGG------AGGAAC---TCACGGATGC-----------------------CAGGTCCGCTGAGAGGACA---ACGA---------------CTGCTGGT---AGCAATGGTG---------GCGACAGGTAGGTGTTTGG----------------GTC----AATGCTCCGGGAACTCTCCAGCCAGGC--CTTGGC-------CCAATTC-CGTAAGAGATTAAAA------------------------------CAT-------C---A------GTAC---CTTCCAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC-----------------------C--ATTTAATCTCGGTGTAGATGTAGTC-GGCGGA------TT-AAACAGATC----------------------------------------------------------CCA---------------T-------------TAC----TAATTT-CA---T-TTCC-CATTGCCA-TT--ACAGGCGCGATTCCATCACCGAGGAGATCACGATTACGAGCACCACA-------------------------------AACGGCASizeHit CountTotal NormTotal
No Reads
droAna3
CCG----GAGGAGAAGGAGGAGAAGCAGGCGGATGC-----------------------CAAGTCCG------------------------------------ATGAG---AGCAGTGCTG---------GCGACAGGTAGGTG---AA----------------ATG-----ATGCTCCGGAAACTCTCCAGCCAGGC--CATGGT-------CGAATTC-CGTAAGAGGATC---------------------------------CAT-------T----------ACAGTTTTTTCAAAATTTGCATGCC----TAGTTCAAGAGTTCT---TCC-----------------------AAAATATAAC--CCACGTAGTCGTAGCCAAGAGCACCACCATC-----CCAGC----------------------------------------------------------CA--------------------------------CTAATTGGTAA-TA---C-TTGA-CTTGATCT-TT--GCAGGCGCGACTCCATCACCGAGGAGATCACGATTACGACCACCACC-------------------------------ACCACCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................G------------------------------------ATGAG---AGCAGTGCTG---------GCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...............................GATGC-----------------------CAAGTCCG------------------------------------ATGAG---AGCAGTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCGAGGAGATCACGATTAT................................................2311.001000010
..........GAGAAGGAGGAGAAGCAGGCGGATGC-----------------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...............GGAGGAGAAGCAGGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331100000
..............AGGAGGAGAAGCAGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000010
droBip1
CCGGAGG-AGA------AGGAGCAGCAGGCGGACGC-----------------------CAAGTCCG------------------------------------ATGAG---AGCAGTGCTG---------GCGACAGGTAGGTG---GAAGAAGGTG--------AAC----ACTGCTCCGGAAACTCTCAAGCCAGGC--CTTGGC-------GGAATTC-CGTAAGAGAATC---------------------------------CAT-------T----------ACAG---TTTCCAAATTTGCATGCC----TAGTTCAAGAGTTCT---TCC-----------------------A--ATATAAC--CCACGTAGTCGTAGCCCAGAGCA------CCCCAGGTCGTC----------------------------------------------------------CA--------------------------------CTAATTGTTAA-T------GCCC-GTGTGTCT-TT--GCAGGCGCGACTCCATCACTGAGGAGATCACGATTACGACCACCACC-------------------------------ACCACCASizeHit CountTotal NormTotal
No Reads
dp5
GAG----GAGG------AGTATCCGGATCCGGAT--------CAGAGGATCGGAGAAGACAGGCCTGAGGAGAGGGCGGCCGCGG---------------CTTCTTGT---AGCAACGGTG---------GCGACAGGTAGGTG---GG----------------ATCATACAGTGCTCAGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATA---------------------------------CGT-------T---T------A------TTCCAAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAAAAAATCGA-----------------------------------------------------ATTAGTAGTTTAGATGGGACTTGGATGTGGAATCTA-----------------------------TAC----TTATTT-CGGGTC-TTCC-CCCTACCA-TT--GCAGGCGCGATTCCATCACCGAGGAGATCGTAATTACAACAACTACA-------------------------------A------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................GACAGGCCTGAGGAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.................................................TCGGAGAAGACAGGCCTGAGGAGAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000100
.....................TCCGGATCCGGAT--------CAGAGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCATCACCGAGGAGATCGT......................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTTTAGATGGGACTTGG.....................................................................................................................................................................2011.0010100000000
...............................GAT--------CAGAGGATCGGAGAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................TCCGGAT--------CAGAGGATCGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................GT---AGCAACGGTG---------GCGACAGGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................CAGGCCTGAGGAGAGGGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACCGAGGAGATCGTA.....................................................1911.0010100000000
droPer2
CCG----CAGG------AGGAGGAGTATCCGGATCCGG--ATCAGAGGATCGGAGAAGACAGGCCTGAGGAGAGGGCGGCCGCGG---------------CTTCTTGT---AGCAACGGTG---------GCGACAGGTAGGTG---GG----------------ATCATACAGTGCTCAGGAAACTCTCCAGCCAGGC--CTTGGT-------CCAATTC-CGTAAGAGAATA---------------------------------CGT-------T---T------A------TTCCAAAATTTGCATGCC----TAGTTCAAGAGTTTT---TCC--------------------------ATTTAAT--CGAAAAAAATCTA-----------------------------------------------------ATTAGTTGTTTAGATGGGACTTGGATGTGGAATCTA-----------------------------TAC----TTATTT-CGGGTC-TTCC-CCCTACCA-TT--GCAGGCGCGATTCCATCACCGAGGAGATCGTAATTACAACAACTACA-------------------------------A------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATCACCGAGGAGATCGTA.....................................................2212.002200000
..................................................CGGAGAAGACAGGCCTGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------TAC----TTATTT-CGGGTC-T......................................................................................................1811.001100000
.........................................................GACAGGCCTGAGGAGAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................GAAGACAGGCCTGAGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..........................................................................................................GT---AGCAACGGTG---------GCGACAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droWil2
CCG----GCGG------TGGGGCTGTCGGTGGTGTTGTTGGTG---------------------------ATA---AC---AATAATGATGGTGGTCAAGATGATGCT---AGTAATGCTGCTGATGCCGCTGACAGGTAGGTG---GAC--TGGTAG------ACTC----TAAGCTCAAGAAACTCTCCAGCCAGGCGGCTTGATGTGTGCACCAATTTGAGTAAGAT------------------------------GGAAT-GAATT--ATTTT---G------GTAC---AATCAAATTTCGCATGCC----TAGTTCAAGAGTTTTCTTTTT------------ACTGTTTTTCAAATATTTACC-----------CTTAGA-----------------CAAATGCCTCAATATTTGTAATCTAATTTAATTATATAT------------------------------------------------------------TGT----TATAT------------A-TTATGCAT-TT--ACAGGCGCGAATCCATCACCGAGGAGATAACCATTACAACTACAACAACT----------------------------AACAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................AATAATGATGGTGGTCAAGATGATGCT---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCATCACCGAGGAGATAAC......................................................2320.50100100
...................................................................................................................................................................................................................................................................................................................CATGCC----TAGTTCAAGAGTTTTC.......................................................................................................................................................................................................................................................................................................2220.50100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGAGATAACCATTACAACT............................................2320.50100010
...................................................................................................................................................................................................................................GAT------------------------------GGAAT-GAATT--ATTTT---G------GT..................................................................................................................................................................................................................................................................................................................................................2120.50100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATAACCATTACAACTACAACAACT----------------------------.......2720.50101000
droVir3
CAG----CAGC------AGCAGCTGGAAGCTGAGCCGG--ATG---------------------------AGA---AA---TGTA---------------CACAAAGTATACACAATAATG---------GCGACAGGTAGGTC---GA----------------AA-----AGCGCA------A--CTCTGGCCTGGT--CTAAAA-------CAAATGG-CAAAAAAAAATAAGAGAGAAGAGAGCGTTAAGTA----TAACCCGCATT--AGTTGG---CT----A-AT---GTACAAAATTTGCATGTCTT--TAGCGCAAGCACTTT---AAA--------TTTGAATGCATGC--C--ATATAAT--ATA--------------------------------------------------------------------------------------TATACACACTCCATAGATATTGCTGCGCCTTTTGAACAAGCTGGC----TATTCA-CA---G-TTTT-CTCTCTTG-TT--TTAGGCGCGATTCGATCAGCGATGACAACACAATCAACAGCAGCACA--------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAACACAATCAACAGCAGCACA--------------------------------------2511.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................GTAGGTC---GA----------------AA-----AGCGCA------A--CTCTGGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATTCGATCAGCGATGAC...........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACACAATCAACAGCAGCACA--------------------------------------2211.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GTG----GAAG------CTGAACAGGATGATAAATAT-----------------------------------------------A---------------TACAAAGT---AGCAATCAAG---------CTGAAAGGTAGGTA---AAC--TT--TGAATCGAAATC----AAGACTCGAGA----CTCGAGACAGACACCTCGG---------TAACTG-GGCAAACG-------------------TTAAGTATATTTAAACCGCTTTCTATTTGA---CT----ATCC---ATACGAAATTAGCATGCATTTGTAGTAGAAGCTCCTC---TGC----------------------------ACCAC--CAACACACATTTA-----------------------------------------------------CATGGTCGTTTATATAG----------------------------ATTCGATCTCTGCTACAGACAGC----CACTAAATA---A----A-TTGCTTTG-TT--TTAGGCGAGATTCGATTGGCGATGACATCACGAGCGCAACAACAACTACCACAG-CAACTGCAGCAACAAACAGCTTCAACGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
GTG----GAAG------CTGAACAGGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTCGATTGGCGATGACATCACGA....................................................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCGATGACATCACGAG...................................................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTATATAG----------------------------ATTCGATCT.......................................................................................................................................2011.001001000
........................................................................................................................................................................................................................AACTG-GGCAAACG-------------------TTAAGT.....................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
....................................................................................................................................................................................................................................................................TAAACCGCTTTCTATTTGA---CT----ATCC---.............................................................................................................................................................................................................................................................................................................................................2511.001000010
................................................................................................................................................................................................................................CAAACG-------------------TTAAGTATATTAC..............................................................................................................................................................................................................................................................................................................................................................................1950.402200000
droGri2
CAG----AAGC------TGGAAGCTGAACAGGAT--------G---------------------------ATAATAAA---TCCA---------------CACATAGT---AGCAATAATG---------GTGACAGGTAGGTGATCAG----------------CTC----ACAACTCTTGCCACAGTCCGACCAGCC--AGA----------------------AACG-------------------TTAAGTA--TTTAAGCTGCATTC--ATTTTTCGATTCACACAACTTGTACAAAATTTGCATGCCTT-CTAGTTCAACATGTTC---TGCACTATAAAT------------------TCTAAA--CTAAAGAAAAGAA-----------------------------------------------------AATATCGATTTATAAT----ATGTAT-------ATA--GACAT-AA---------TG--------AGC--------------------AA-CTCTCTTG-TT--TTAGGCGAGATTCCATCTGTGATGAAATCACAATCACAACTACAACTACTACTGGCAAC-------------------AGCAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..G----AAGC------TGGAAGCTGAACAGGAT--------G---------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/19/2015 at 10:54 AM