dsi_10120

intron [x_12830516_12831124_-]; CDS [x_12830471_12830515_-]; exon [x_12830471_12830515_-]; intron [x_12828521_12830470_-]

-----#############################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GAAAGCAGCTCCGAGGAGGAGGAGGTTGTCGAGGAAACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGATTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCTAAAGAACTCGATTGGTGTTCACTTATGTCTATCTTTTTTTTTTGCCCTAACTATAACCAATTTTTTGATTTTTTTCGAAACCGAACCTTGCCCACCATTTTGTATTCCAAATTTTCTATATGTGTTGTATTTTGTCAA ************************************************....(((((....)).)))((((....)))).........(((((((.((((...((((...(((((.....((.(((....))).)).....))))).....))))....)))).))))))).((((((......))))))........************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	GSM343915 embryo	SRR553487 NRT_0-2 hours eggs	M024 male body	M053 female body	SRR902009 testis	SRR618934 dsim w501 ovaries
..................................................................................................................................................................................................GAACCTTGCACACCATTTTTTGT.................................	23	3	1	1.00	1	0	1	0	0	0	0	0
............................................................................................................GCCTAAAGAACTCGATTGGTGTA.......................................................................................................................	23	1	1	1.00	1	0	0	0	0	0	1	0
........................................................ACATTTTTGTTGCCGATTTTTGT...........................................................................................................................................................................	23	0	1	1.00	1	0	1	0	0	0	0	0
..................................................................................CATCTGTTGTTGGTTTTGGTC...................................................................................................................................................	21	2	1	1.00	1	0	0	0	1	0	0	0
...........................GTCGAGGAAACCCGCGAGGAGACGA......................................................................................................................................................................................................	25	1	1	1.00	1	0	0	0	0	1	0	0
..........CCGAGGAGGAGGAGTTTGTCGAGGAA......................................................................................................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0	0
.....CAGCTCCGAGGAGGAGGAGGTTGT.............................................................................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................TCGAGTCCTGTTCACTTATGTC.............................................................................................................	22	3	1	1.00	1	0	0	1	0	0	0	0
.AAAGCAGCTCCGAGGA.........................................................................................................................................................................................................................................	16	0	2	0.50	1	0	0	0	0	0	0	1
..................................................................................................................................TCACTTAACTCTATCTTTATT...................................................................................................	21	3	5	0.40	2	0	0	2	0	0	0	0
.........................................................................TGTTGTCGACATCGTTTGTT.............................................................................................................................................................	20	2	5	0.20	1	0	0	1	0	0	0	0
.....................................................................................................................ACTCGATCGGTGTTCAG....................................................................................................................	17	2	17	0.06	1	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................GTGTTGTATTTTGGC..	15	1	20	0.05	1	0	0	0	0	0	0	1

CTTTCGTCGAGGCTCCTCCTCCTCCAACAGCTCCTTTGGGCGCTCCTCTGCATTCATGTAAAAACAACGGCTAAAAACAGCTGTAGAAAACAACCAAAACCACGTCGTCGGATTTCTTGAGCTAACCACAAGTGAATACAGATAGAAAAAAAAAACGGGATTGATATTGGTTAAAAAACTAAAAAAAGCTTTGGCTTGGAACGGGTGGTAAAACATAAGGTTTAAAAGATATACACAACATAAAACAGTT ************************************************....(((((....)).)))((((....)))).........(((((((.((((...((((...(((((.....((.(((....))).)).....))))).....))))....)))).))))))).((((((......))))))........************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	O002 Head	SRR902008 ovaries	SRR553487 NRT_0-2 hours eggs	SRR902009 testis
.............................................................................................................................................................................................................TGGTAAAACATAAGGTTTAAAAGATAT..................	27	0	1	1.00	1	0	0	1	0	0	0	0
............................................................................................................................................................................................................GTGGTAAAACATAAGGTTT...........................	19	0	1	1.00	1	0	0	0	1	0	0	0
...........................................................AAAATCAACCGCTAGAAACAGCT........................................................................................................................................................................	23	3	1	1.00	1	0	1	0	0	0	0	0
.................CCTCCTCCAACAGCTCCTTTGGGCGCT..............................................................................................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................AAAAAAAAACGGGATGGATCT...................................................................................	21	2	2	0.50	1	0	0	0	0	1	0	0
....................................................................................................................................................AAAAAAACGAGGTTGATATT..................................................................................	20	2	5	0.40	2	0	0	0	0	0	0	2
..................................................................................................................................................AAAAAAAAAACGGATTGATAT...................................................................................	21	2	3	0.33	1	0	0	0	0	0	1	0
................................................................................................................................................GAAAAAAAAAACGGGA..........................................................................................	16	0	4	0.25	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................AAAAGATTGGCCTTGGAACGG..............................................	21	3	4	0.25	1	0	0	0	0	0	1	0
.................................................................................................................................................AAAAAAAAGATGGGAGTGATAT...................................................................................	22	3	4	0.25	1	0	0	0	0	1	0	0
.....................................GCGCGCTGCTCTGCA......................................................................................................................................................................................................	15	2	20	0.20	4	0	2	0	0	0	2	0
.....................................................................GCTATAGAGAGCTGTAGAAA.................................................................................................................................................................	20	3	11	0.09	1	1	0	0	0	0	0	0
...................................................................................................................................................AAAAGAAACGGGATTGGT.....................................................................................	18	2	12	0.08	1	1	0	0	0	0	0	0
................................................................................................................................................AAAAAAAAAAACGGGATT........................................................................................	18	1	20	0.05	1	0	0	1	0	0	0	0
..................................................................................................ACCACGTAGCCGGATT........................................................................................................................................	16	2	20	0.05	1	1	0	0	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	x:12830271-12830520 -	dsi_10120	GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAAACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATCTT--------------------------------------T-------------------TTTTT-----------TTGC------CCT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droSec2	scaffold_20:125299-125548 -		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAAACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATCTT--------------------------------------T-------------------TTTTT-----------TTGC------CCT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGACAA
dm3	chrX:13493239-13493498 -		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAAACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATCTT------------------------------------T---------------------TT-TTTTTTTTTGTTTTTGC------CCT----AACTATAAC-----------------------------------------AA-------ATTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droEre2	scaffold_4690:13389103-13389350 +		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCTGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATTT---------------------------------------T-------------------TTTTT-----------TTGC------CAT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT---TCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droYak3	X:7776077-7776330 -		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATT------------------------------------T---------------------TT-TTTTTTT------TTGC------CAT----AACTATAAC-----------------------------------------CA-------AGTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droEug1	scf7180000408958:98965-99247 +		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATCT------------------------------ATTT--TT-------------------TTTT--TTT------TATGT------CAT----AACTATAAC-----------------------------------------CA-------ATTTTTGTGATTTTT--ATCGAAAAC------CGAAA----ACC-GAAAACCTTGCC-------CACCCCAAACCCCCA-------------------------ATATGTTTTT-----T-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCA-
droBia1	scf7180000302421:566536-566782 -		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACACTTTTGTTGCCGA-TTTTTGTCAACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCAATTGGTGT-------------------------TCACT-TATGTC----T--ATATA------------------------------------T---------------------TT-TTTT----------T--------CAT-----ACTATAAC-----------------------------------------CA-------GTATTT-TGATTTTT---TCCACGCCG-------------AA--------CCTTGCCC------CT------------------------------------CCCT---TTATT-----T-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droTak1	scf7180000415812:29447-29709 +		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATA------------------------------------ATT-------------------TTTGT-----------TCGT------CAT----AACTATAAC-----------------------------------------CA-------GTTTTT-TGATTTTT---TCCACACCA-------------AACCA------CTTGACC------CGCCCCA--CCTCCA-------------------------AT---TTTTT-----A-T-TCCAAATT-TTTTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droEle1	scf7180000491006:28364-28626 +		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATA------------------------------------T---------------------TT-TTTTTTT------ATGT------CAT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT--TTCGAAACCGA------------AA--------CCTTGCCCCGCCCCCA------------------------------------CAAT--CTTTTT-----T-T-TCAAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droFic1	scf7180000453549:143710-143964 -		GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATAT------------------------------ACCT--TT-------------------TTTT-------------T--------CAT----AACTATAAC-----------------------------------------CA-------CTTTTT-TGATTTTT---CCGAAACCGA-------TATCCCA--------CC--------------------------------------------------CCAT---TTTGTTTTTTT-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA
droKik1	scf7180000302344:1512655-1512918 +		CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCAACATTTTTCGTTGGTTTTGGTGCAGCAGCAT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACC-TATGTC----T--ATATATTT--TGT--C--------------------AT----------------------------TT-----------TTCC------C------CCCTATAAA-----------------------------------------TA-------TTTTTT-T-ATTTT----TTGACACCCC-------TCTCACC--------TC-------------------------CTAT---TTATGTTTTGTATTTTGT----------CT-----A-T-TCAAAATT-TTCTATATGTGTTGT-------------------ATG----------------------------TCGTCAA
droAna3	scaffold_13248:2476056-2476374 -		CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGTGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATTTTTTGTTGGTTTTGGTGCAGCAGCCTCTTAAAAACTAT--------------------TCGATTGGTGT-------------------------TCACT-TATGTC----TCGATATT--A--TGTCTC--------------------ATTT--TT-------------------TTTTT-----------TCGCTG--CACAT----AACTATAAATATTTT-TGTCGTTGTC------------------------CT-------ATTTTT-TGATTTTC---TCAAAAAA----------CTCAAA--------CC-------------------------CTATTTTTTATGTTTTGTATTTTGTCCA----TTTG----------TCAAAATTCTTCTATATGTGTTGT-------------------ATTTTT-TCTA------------TTTT--CGTTGTCAA
droBip1	scf7180000396575:425249-425539 +		CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGTGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATTTTTTGTTGGTTTTGGTGCAGCAGCCT--TTAAAACTAT--------------------TCGATTGGTGT-------------------------TCACT-TATGTC----G--ATATT--A--TGT-------------------------------------------------------------------CGCTGCACACAT----AACTATAACTATTTTTTGTCGTTGTC------------------------CA-------ATTTTT-TGATTTTT------AAACCA-------------AA--------AAAAACC-------C-------------TATTTTTTAT-TTTTGTATTTTGTCCAT---TTTG----------TCAAAATT-TTCTATATGTGTTGT-------------------ATTT-------------------------CGTTGTCAA
dp5	XL_group1e:3490085-3490428 +		CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTGTGTCGAAATTTTTTGTTGGTTTTGGTGCAGCAGCCT--CAAGAAC-----------------------TCGATTGGTGT-------------------------TCATT-TATAATATACTCG-TACT--ATCTGTATT--------------------ATTT--TACCACCCCCTCCCCCCACTCCC-T--TTT------TGTGT----CACAT----AAATATGAATATTTT-TGTCGCTCCT------------------------TTTTTTTTTGTTGTT-TGA--------TCGATAAAAA------------CA--------CCTTC-----------------------CATCTTT--TGTTATGTAA-------TT---TTTGTTTTTTTACTCCAAAATT-TTCTATATGTGTTGT-------------------ATTTTTGTATA------------TTTTTCTGTTGTCAA
droPer2	scaffold_17:427148-427274 +		CAAAGCAGCTCCGAGGAGGAGGGAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTT------------TTTGTTGGTTTTGGTGCAGCAGCCT--CAAGAAC-----------------------TCGATTGCTGT-------------------------TCATT-TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2	scf2_1100000004590:4679196-4679507 +	dwi_1856	GTCAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTAG----------CAAA-ACC--AACAACA---------------AGAGCAACAGCAA--CAACAACAACAACAACAATAAATCCCTTTTTTGTTTGTTGTTGTTGTACATATGCCAAACTCTTTTTTTTTTTTTGTT----T------T------GT--TTTTGTCTTTAGCGTATATGTATTTTATT-------------------TGTAT-----------TTGT------TGT----A-TTATTAT------TATTTTTTGTCCAAATTTTTTATTTTAATTGTAATTA-------TTATTT-T-----TT--TTTATTACTG-------------TA--------TCCTGTC-------TC------------------------------------TCTC---TCTGT--------------------CTGTTTG---TGT-------------------GTG----------------------------TTGTCAA
droVir3	scaffold_12970:10961363-10961587 -	dvi_13960	GCCAGCAGTTCCGAAGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTAG-TTTTTGTGGCCAA-ACT----------------------------GAGCAGCT-----AAAAC-----------------------TCGATTGGTGT-------------------------TCTTT-TCTATT----T--TACTT--------------------------------------T-------------------TT------------------------CTTAACA-ATTAT-------------------------------------------------------GATT-TGATTTTAATTTC-ATACCT-------------AA-----------------------------------------------------------------------------------AAATAT-TTCTATATGTGT-GTATTTTACATATTTGAATTTGTGTTTGTATACGTCCTTGTATTT-------GTGTTTG
droMoj3	scaffold_6473:10389627-10389861 +		GCCAGCAGTTCCGAAGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTAG-TTTTTGTGGCCAAAAC---------------------------T-GAGCAGCT----AACAAC-----------------------TCGATTGGTGT-------------------------TTTCTCTCTGTT----T------T------GT--T--------------------------------------------------TTTTTTTTTTTTTT----------TTATCAAATTAT-------------------------------------------------------ATTT-TGATTTTATTTTC-ATAAAACAAAAAGAAA----AAA-AAAAAAAAAAAA-------CAAAACAAAA-------------------------------------------------CCAAAATT-TTCTATATGTGTTTT-------------------GTAT---------------------------TTGTATA
droGri2	scaffold_15203:2954200-2954365 -		GTCAGCAGTTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTA--TTTTTGTGGCCAA-ACT----------------------------TAGCAGCTA--AATG--------------------------TCGATTGGTGT-------------------------TT-----------------------------------------------------------------------------------------------------------TTAACA-ATTAT-------------------------------------------------------GATT-TGATTATGATTTC-ATACAA-------------AAAAA------AAT------------------------------------------------------------------------GAATG-CTCTATATGTGT-GT-------------------ATT----------------------------TT----A

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAAACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATCTT--------------------------------------T-------------------TTTTT-----------TTGC------CCT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..............................................................................................................GCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................................................ACATTTTTGTTGCCGA-TTTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
............................GTCGAGGAAACCCGCGAGGAGACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CAGCTCCGAGGAGGAG-GAGGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AAAGCAGCTCCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	16	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAAACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATCTT--------------------------------------T-------------------TTTTT-----------TTGC------CCT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGACAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................GTTGTCGAGGAAACCCGCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
......AGCTCCGAGGAGGAG-GAGGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0

dm3

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAAACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATCTT------------------------------------T---------------------TT-TTTTTTTTTGTTTTTGC------CCT----AACTATAAC-----------------------------------------AA-------ATTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......GCTCCGAGGAGGAG-GAGGTTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8
.......GCTCCGAGGAGGAG-GAGGTTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................GTTGTCGAGGAAACCCGCGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................AGGAG-GAGGTTGTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........CTCCGAGGAGGAG-GAGGTTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........TCCGAGGAGGAG-GAGGTTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GTCGAGGAAACCCGCGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GCTCCGAGGAGGAG-GAGGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...............................GAGGAAACCCGCGAGGAGACGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATATGTGTTGT-------------------ATT----------------------------TTGT...	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................AG-GAGGTTGTCGAGGAAACCCGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CGAGGAAACCCGCGAGGAGACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GGAG-GAGGTTGTCGAGGAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GCTCCGAGGAGGAG-GAGGTTGTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................CGAGGAAACCCGCGAGGAGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GAGGAGGAG-GAGGTTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........CTCCGAGGAGGAG-GAGGTTGTCGATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GAG-GAGGTTGTCGAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................GGAAACCCGCGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGCTCCGAGGAGGAG-GAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................GAGGAAACCCGCGAGGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCTGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATTT---------------------------------------T-------------------TTTTT-----------TTGC------CAT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT---TCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................GGTTGTCGAGGAGACCCGCGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
.......................AGGTTGTCGAGGAGACCCGCGAGGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
................................AGGAGACCCGCGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
.................................GGAGACCCGCGAGGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................TT-TGATTTTT---TCGAAACCG-------------AA--------CCTTGC....................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
..................GAG-GAGGTTGTCGAGGAGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...........................TGTCGAGGAGACCCGCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
.......GCTCCGAGGAGGAG-GAGGTTGTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0

droYak3

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATT------------------------------------T---------------------TT-TTTTTTT------TTGC------CAT----AACTATAAC-----------------------------------------CA-------AGTTTT-TGATTTTT--TTCGAAACCG-------------AA--------CCTTGCC-------CA------------------------------------CCAT---TTTGT-----A-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..................GAG-GAGGTTGTCGAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................GGAGACCCGCGAGGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................CGAGGAGACCCGCGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0

droEug1

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATCT------------------------------ATTT--TT-------------------TTTT--TTT------TATGT------CAT----AACTATAAC-----------------------------------------CA-------ATTTTTGTGATTTTT--ATCGAAAAC------CGAAA----ACC-GAAAACCTTGCC-------CACCCCAAACCCCCA-------------------------ATATGTTTTT-----T-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCA-	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACACTTTTGTTGCCGA-TTTTTGTCAACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCAATTGGTGT-------------------------TCACT-TATGTC----T--ATATA------------------------------------T---------------------TT-TTTT----------T--------CAT-----ACTATAAC-----------------------------------------CA-------GTATTT-TGATTTTT---TCCACGCCG-------------AA--------CCTTGCCC------CT------------------------------------CCCT---TTATT-----T-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATA------------------------------------ATT-------------------TTTGT-----------TCGT------CAT----AACTATAAC-----------------------------------------CA-------GTTTTT-TGATTTTT---TCCACACCA-------------AACCA------CTTGACC------CGCCCCA--CCTCCA-------------------------AT---TTTTT-----A-T-TCCAAATT-TTTTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATA------------------------------------T---------------------TT-TTTTTTT------ATGT------CAT----AACTATAAC-----------------------------------------CA-------ATTTTT-TGATTTTT--TTCGAAACCGA------------AA--------CCTTGCCCCGCCCCCA------------------------------------CAAT--CTTTTT-----T-T-TCAAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCGACATCTTTTGTTGGTTTTGGTGCAGCAGCCT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACT-TATGTC----T--ATATAT------------------------------ACCT--TT-------------------TTTT-------------T--------CAT----AACTATAAC-----------------------------------------CA-------CTTTTT-TGATTTTT---CCGAAACCGA-------TATCCCA--------CC--------------------------------------------------CCAT---TTTGTTTTTTT-T-TCCAAATT-TTCTATATGTGTTGT-------------------ATT----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGCGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTTTGTCAACATTTTTCGTTGGTTTTGGTGCAGCAGCAT--AAAGAAC-----------------------TCGATTGGTGT-------------------------TCACC-TATGTC----T--ATATATTT--TGT--C--------------------AT----------------------------TT-----------TTCC------C------CCCTATAAA-----------------------------------------TA-------TTTTTT-T-ATTTT----TTGACACCCC-------TCTCACC--------TC-------------------------CTAT---TTATGTTTTGTATTTTGT----------CT-----A-T-TCAAAATT-TTCTATATGTGTTGT-------------------ATG----------------------------TCGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGTGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATTTTTTGTTGGTTTTGGTGCAGCAGCCTCTTAAAAACTAT--------------------TCGATTGGTGT-------------------------TCACT-TATGTC----TCGATATT--A--TGTCTC--------------------ATTT--TT-------------------TTTTT-----------TCGCTG--CACAT----AACTATAAATATTTT-TGTCGTTGTC------------------------CT-------ATTTTT-TGATTTTC---TCAAAAAA----------CTCAAA--------CC-------------------------CTATTTTTTATGTTTTGTATTTTGTCCA----TTTG----------TCAAAATTCTTCTATATGTGTTGT-------------------ATTTTT-TCTA------------TTTT--CGTTGTCAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................GGAGACCCGTGAGGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	2	0	0	0	0
..............................CGAGGAGACCCGTGAGGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0
...............GAGGAG-GAGGTTGTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
...............GAGGAG-GAGGTTGTCGAGGAGACCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...........................TGTCGAGGAGACCCGTGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
............GAGGAGGAG-GAGGTTGTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
........CTCCGAGGAGGAG-GAGGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
........................GGTTGTCGAGGAGACCCGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.......GCTCCGAGGAGGAG-GAGGTTGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
...............................GAGGAGACCCGTGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0
........................GGTTGTCGAGGAGACCCGTGAGGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
......AGCTCCGAGGAGGAG-GAGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
.......GCTCCGAGGAGGAG-GAGGTTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
.......................AGGTTGTCGAGGAGACCCGTGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
..............................CGAGGAGACCCGTGAGGAGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
........................GGTTGTCGAGGAGACCCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1

droBip1

CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCCGTGAGGAGACGTAAGTACATTTTTGTTGCCGA-TTTTTGTCAACATTTTTTGTTGGTTTTGGTGCAGCAGCCT--TTAAAACTAT--------------------TCGATTGGTGT-------------------------TCACT-TATGTC----G--ATATT--A--TGT-------------------------------------------------------------------CGCTGCACACAT----AACTATAACTATTTTTTGTCGTTGTC------------------------CA-------ATTTTT-TGATTTTT------AAACCA-------------AA--------AAAAACC-------C-------------TATTTTTTAT-TTTTGTATTTTGTCCAT---TTTG----------TCAAAATT-TTCTATATGTGTTGT-------------------ATTT-------------------------CGTTGTCAA	Size	Hit Count	Total Norm	Total
No Reads

dp5

CAAAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTTGTGTCGAAATTTTTTGTTGGTTTTGGTGCAGCAGCCT--CAAGAAC-----------------------TCGATTGGTGT-------------------------TCATT-TATAATATACTCG-TACT--ATCTGTATT--------------------ATTT--TACCACCCCCTCCCCCCACTCCC-T--TTT------TGTGT----CACAT----AAATATGAATATTTT-TGTCGCTCCT------------------------TTTTTTTTTGTTGTT-TGA--------TCGATAAAAA------------CA--------CCTTC-----------------------CATCTTT--TGTTATGTAA-------TT---TTTGTTTTTTTACTCCAAAATT-TTCTATATGTGTTGT-------------------ATTTTTGTATA------------TTTTTCTGTTGTCAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
....................G-GAGGTTGTCGAGGAGACCAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1
....................G-GAGGTTGTCGAGGAGACCAGAGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1
...........................TGTCGAGGAGACCAGAGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1
.......GCTCCGAGGAGGAG-GAGGTTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1
.....................................................................................ATTTTTTGTTGGTTTTGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0

droPer2

CAAAGCAGCTCCGAGGAGGAGGGAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTACATTTTTGTTGCCAA-TTT------------TTTGTTGGTTTTGGTGCAGCAGCCT--CAAGAAC-----------------------TCGATTGCTGT-------------------------TCATT-TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................GGAGGTTGTCGAGGAGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0
.....................GGAGGTTGTCGAGGAGACCAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.....................GGAGGTTGTCGAGGAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0

droWil2

GTCAGCAGCTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTAG----------CAAA-ACC--AACAACA---------------AGAGCAACAGCAA--CAACAACAACAACAACAATAAATCCCTTTTTTGTTTGTTGTTGTTGTACATATGCCAAACTCTTTTTTTTTTTTTGTT----T------T------GT--TTTTGTCTTTAGCGTATATGTATTTTATT-------------------TGTAT-----------TTGT------TGT----A-TTATTAT------TATTTTTTGTCCAAATTTTTTATTTTAATTGTAATTA-------TTATTT-T-----TT--TTTATTACTG-------------TA--------TCCTGTC-------TC------------------------------------TCTC---TCTGT--------------------CTGTTTG---TGT-------------------GTG----------------------------TTGTCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................CGAGGAGACCAGAGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	1	1	0
...................AG-GAGGTTGTCGAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0
...........................TGTCGAGGAGACCAGAGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
.....................................................................................................................................ATAAATCCCTTTTTTGTTTGTTGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
..................GAG-GAGGTTGTCGAGGAGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
...................AG-GAGGTTGTCGAGGAGACCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
..........CCGAGGAGGAG-GAGGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
...............GAGGAG-GAGGTTGTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	0	0	1	1
.................GGAG-GAGGTTGTCGAGGAGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0
........................GGTTGTCGAGGAGACCAGAGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0
..........CCGAGGAGGAG-GAGGTTGTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
.........TCCGAGGAGGAG-GAGGTTGTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
...................AG-GAGGTTGTCGAGGAGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
......AGCTCCGAGGAGGAG-GAGGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
...................................................................................ACA---------------AGAGCAACAGCAA--CAACAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	4	0.25	1	0	0	1	0	0
......................................................................AAA-ACC--AACAACA---------------AGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	1	0

droVir3

GCCAGCAGTTCCGAAGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTAG-TTTTTGTGGCCAA-ACT----------------------------GAGCAGCT-----AAAAC-----------------------TCGATTGGTGT-------------------------TCTTT-TCTATT----T--TACTT--------------------------------------T-------------------TT------------------------CTTAACA-ATTAT-------------------------------------------------------GATT-TGATTTTAATTTC-ATACCT-------------AA-----------------------------------------------------------------------------------AAATAT-TTCTATATGTGT-GTATTTTACATATTTGAATTTGTGTTTGTATACGTCCTTGTATTT-------GTGTTTG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...........................TGTCGAGGAGACCAGAGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGTTCCGAAGAGGAG-GAGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................AG-GAGGTTGTCGAGGAGACCAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GTTCCGAAGAGGAG-GAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GAGGAG-GAGGTTGTCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GTTCCGAAGAGGAG-GAGGTTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............AAGAGGAG-GAGGTTGTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GTTCCGAAGAGGAG-GAGGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........TCCGAAGAGGAG-GAGGTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GGTTGTCGAGGAGACCAGAGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................GAG-GAGGTTGTCGAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CCGAAGAGGAG-GAGGTTGTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
...................AG-GAGGTTGTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..............AGAGGAG-GAGGTTGTCGAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CCGAAGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	39	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................GTTGTCGAGGAGACCAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..............................CGAGGAGACCAGAGAGGAGACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GAG-GAGGTTGTCGAGGAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TTGTCGAGGAGACCAGAGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................GTGGCCAA-ACT----------------------------GAGCAGCC-----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GCCAGCAGTTCCGAAGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTAG-TTTTTGTGGCCAAAAC---------------------------T-GAGCAGCT----AACAAC-----------------------TCGATTGGTGT-------------------------TTTCTCTCTGTT----T------T------GT--T--------------------------------------------------TTTTTTTTTTTTTT----------TTATCAAATTAT-------------------------------------------------------ATTT-TGATTTTATTTTC-ATAAAACAAAAAGAAA----AAA-AAAAAAAAAAAA-------CAAAACAAAA-------------------------------------------------CCAAAATT-TTCTATATGTGTTTT-------------------GTAT---------------------------TTGTATA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.........................GTTGTCGAGGAGACCAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...................................AGACCAGAGAGGAGACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
......AGTTCCGAAGAGGAG-GAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
........................GGTTGTCGAGGAGACCAGAGAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.......GTTCCGAAGAGGAG-GAGGTTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
......AGTTCCGAAGAGGAG-GAGGTTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGAAA----AAA-AAAAAAAAA......................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0

droGri2

GTCAGCAGTTCCGAGGAGGAG-GAGGTTGTCGAGGAGACCAGAGAGGAGACGTAAGTA--TTTTTGTGGCCAA-ACT----------------------------TAGCAGCTA--AATG--------------------------TCGATTGGTGT-------------------------TT-----------------------------------------------------------------------------------------------------------TTAACA-ATTAT-------------------------------------------------------GATT-TGATTATGATTTC-ATACAA-------------AAAAA------AAT------------------------------------------------------------------------GAATG-CTCTATATGTGT-GT-------------------ATT----------------------------TT----A	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_10120

x:12830321-12830470 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-22.1	-22.1	-22.1