ID:

dsi_10118

 Coordinate:

x:18527432-18527581 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.4 -8.4

Flybase annnotation

five_prime_UTR [x_18527582_18527658_-]; exon [x_18527582_18527658_-]; five_prime_UTR [x_18527582_18527658_-]; exon [x_18527582_18527658_-]; intron [x_18527023_18527581_-]; intron [x_18524505_18527581_-]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGATTCTCGGCAGTTGAAAATTTTTCGTCGTACTCTCGTAACAACAAAGGTATGTTTTTCGTTTTGGCACCTTATCAAGTACACCAGACCGTAAGCCAAGGCACCGATCGATGCCATCCAAAGCAAGAATTAACTTGGCCGCGCGGCGCCACTTCGCCACTCCAACTCGCAACACTCGCTCACACACACACACACACATACACTAGCGCACTTACACACTTCCGCTGGTGAATTCCTCGGGCAGCAGGA
***************************************************........(((..((((..((((......(((........)))....))))..)))).)))..**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M053
female body
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
...................................CTCGTAACAACAAAGGTATG................................................................................................................................................................................................... 20 0 1 38.00 38 32 2 4 0 0 0 0 0 0 0 0 0 0 0
.....................................CGTAACAACAAAGGTATG................................................................................................................................................................................................... 18 0 1 18.00 18 14 3 1 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACTCTCGTA................................................................................................................................................................................................................. 26 0 1 11.00 11 0 0 0 9 0 0 1 0 1 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACTCTCGTAAC............................................................................................................................................................................................................... 28 0 1 7.00 7 0 0 0 3 0 1 1 0 2 0 0 0 0 0
...ATTCTCGGCAGTTGAAAATTTTTCGTC............................................................................................................................................................................................................................ 27 0 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACTCT..................................................................................................................................................................................................................... 22 0 1 4.00 4 0 2 0 0 0 0 2 0 0 0 0 0 0 0
...................................CTCGTAACAACAAAGGTA..................................................................................................................................................................................................... 18 0 1 3.00 3 2 0 0 0 0 0 0 0 0 1 0 0 0 0
............AGTTGAAAATTTTTCGTCGTACT....................................................................................................................................................................................................................... 23 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0
.......................TTTCGTCGTACTCTCGTA................................................................................................................................................................................................................. 18 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0
....................ATTTTTCGTCGTACTCTCGT.................................................................................................................................................................................................................. 20 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AAGCCAAGGCACCGATCGATG........................................................................................................................................ 21 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0
....TTCTCGGCAGTTGAAAATTTTTCGTC............................................................................................................................................................................................................................ 26 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACTCTCGTAACA.............................................................................................................................................................................................................. 29 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................TATGTTTTTCGTTTTGGCACC.................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACTCTCGTAA................................................................................................................................................................................................................ 27 0 1 2.00 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0
............................TCGTACTCTCGTAACAACAAAGGC...................................................................................................................................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTCCGTCGTACTCTCGTAAC............................................................................................................................................................................................................... 28 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACT....................................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..............TTGAAAATTTTTCGTCGTACT....................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..............................GTACTCTCGTAACAACAAAGCGAC.................................................................................................................................................................................................... 24 3 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
............AGTTGAAAATTTTTCGTCGTA......................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0
.....................TTTTTCGTCGTACTCTCG................................................................................................................................................................................................................... 18 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0
......................TTTTCGTCGTACTCTCGTAACA.............................................................................................................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
......................TTTTCGTCGTACTCTCGT.................................................................................................................................................................................................................. 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTTTTCGTCGTACTCTCGT.................................................................................................................................................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
............AGTTGAAAATTTTTCGTCGTACTCT..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........GCAGTTGAAAATTTTTCGTCGTACTCT..................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTCCGTCGTACTCTCGTA................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................GTCGTACTCTCGTAACAACAAAGGTA..................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............AGTTGAAAATTTTTCGTCGTACTCTCGG.................................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTCGTAACAACAAAGGTATGT.................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTCGTAACAACAAAGGTATGC.................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTCCGTCGTACTTTCGT.................................................................................................................................................................................................................. 25 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................CGTACTCTCGTAACAACAAAGCGAC.................................................................................................................................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................CGTACTCTCGTAACAACAAAG........................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................AAGAATTAACTTGGCCGCGC......................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................TACACCAGACCGTAAGCCAAG..................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................AAAATTTTTCGTCGTACTCTC.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACTTCCGCTGGTGAATTCCTCG.......... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................GGTGAATTCCTCGGGCAGCAGTT 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................CTCGTAACAACAAAGGTAT.................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............TGAAAATTTTTCGTCGTACTCTCGT.................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........CGGCAGTTGAAAATTTTTCGTCGTACT....................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAATTTTCCGTCGTACTCTCGTAACA.............................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...ATTCTCGGCAGTTGAAAATTTTTCGC............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACTCTC.................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................CTCGTAGCAACAAAGGTATG................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAATTTTTCGTCGTACTCTCGTAA................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................CTCGTAACAACAAGGGTATG................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTCCGTCGTACTCTCGTAACA.............................................................................................................................................................................................................. 29 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACCTTCGTAAC............................................................................................................................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GGTGAATTCCTCGGGCAGCAGTA 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................TCTCGTAACAACAAAGGTATG................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAATTTTTCGTCGTACTCTCGTAACA.............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................TTTTCGTCGTACTCTCGTAACAACAAAG........................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACG....................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........GCAGTTGAAAATTTTTCGTCGTACT....................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............TTGAAAATTTTTTGTCGTACTCT..................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........GGCAGTTGAAAATTTTTCGTCGTACT....................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTCCGTCGTACTCTCGT.................................................................................................................................................................................................................. 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................GGTGAATTCCTCGGGCAGCAGT. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................CTCTCGTAACAACAAAGGTATG................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................AAATTTTTCGTCGTACTCTCGT.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GAATTCCTCGGGCAGCAGGA 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......CTCGGCAGTTGAAAATTTTTCGTC............................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AAAAGGTATGTTTTTCGT........................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................TCTCGTAACAACAAAGGTAT.................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....TTCTCGGCAGTTGAAAATTTTTCGTCG........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTAACTTGGCCGCGCGGCGTTA.................................................................................................. 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................GAAAATTTTTCGTCGTACT....................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GGTGAATTCCTCGGGCAGCAG.. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......CTCGGCAGTTGAAAATTTTTCGTCGTA......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................GTCGTACTCTCGTAACAACAAAGGTATG................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTTTTCGTCGTACTCTCGTAACAAC............................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................AAATTTTTCGTCGTACTCTCGTAAC............................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............AGTTGAAAATTTTTCGTCGTACTCTCGT.................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...ATTCTCGGCAGTTGAAAATTTTTC............................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGCACTTACACACTTCCGCTGGTGAA................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....TCTCGGCAGTTGAAAATTTTT................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGCTGGTGAATTCCTCGGGC....... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............AGTTGAAAATTTTTCGTCGTACTCG..................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................ATTTTTCGTCGTACTCTCGTAACA.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............TGAAAATTTTCCGTCGTACTCT..................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................CCCGTAACAACAAAGGTATG................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................GTTTTTCGTTTTGGCACCTTA............................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................GTCGTACTCTCGTAACAACAA.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GCTGGTGAATTCCTCGGGCAG..... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGCACTTACACACTTCCGCTG...................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................TTATCAAGTACACCAGACCGT............................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................CGTAAGCCAAGGCACCGATCGATGCC...................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................ACTCTCGTAACAACAAAGG....................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AATTTTTCGTCGTACTCT..................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......CTCGGCAGTTGAAAATTTTTCGTCG........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................CTCATAACAACAAAGGTATG................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CGTCGTACTCTCGTAACAACAAAGC....................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............TGAAAATTTTTCGTCGTACTTTCGTA................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTCCGTTGGTGAATTACTC........... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TTCCGTCGTACTCTCGTA................................................................................................................................................................................................................. 18 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................CCAGACCGTCAGCTAAGG.................................................................................................................................................... 18 2 11 0.36 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACACACATACACTGGCGCACT..................................... 21 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................CCAGACCGTAATCCAA...................................................................................................................................................... 16 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................AGTACACCAGACGGTCGGCC........................................................................................................................................................ 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CCAGACCGTCAGCTAAG..................................................................................................................................................... 17 2 19 0.16 3 0 0 0 1 0 0 0 0 2 0 0 0 0 0
...................................................................................................................................................................................................................................GGTGAATACCTCGGGAAGG.... 19 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................CAGACCGTCAGCTAAGG.................................................................................................................................................... 17 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................GGTATGATTTTCGTT.......................................................................................................................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

CTCTAAGAGCCGTCAACTTTTAAAAAGCAGCATGAGAGCATTGTTGTTTCCATACAAAAAGCAAAACCGTGGAATAGTTCATGTGGTCTGGCATTCGGTTCCGTGGCTAGCTACGGTAGGTTTCGTTCTTAATTGAACCGGCGCGCCGCGGTGAAGCGGTGAGGTTGAGCGTTGTGAGCGAGTGTGTGTGTGTGTGTGTATGTGATCGCGTGAATGTGTGAAGGCGACCACTTAAGGAGCCCGTCGTCCT
****************************************************************************************************************************************........(((..((((..((((......(((........)))....))))..)))).)))..*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M024
male body
..................................AGAGCATTGTTGTTTCCATAC................................................................................................................................................................................................... 21 0 1 2.00 2 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................AGCGGTGAGGTTGAGCGTTGT........................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................TGCGGTGAAGCGGTGAGGTTGA.................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CGCGTGAATGTGTGAAGGCGA....................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.............................................................................................TTCGGTTCCGTGGCTAGCTAC........................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
....................................AGCATTGTTGTTCCGAT..................................................................................................................................................................................................... 17 2 14 1.21 17 0 0 0 0 13 1 0 3 0
.........................................................................................................................................................TAGCGGTGAGGTTGAGCGT.............................................................................. 19 1 2 1.00 2 2 0 0 0 0 0 0 0 0
.....................................................................................................CGTGGCTAGCTACGGTAGGTT................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................GGTGAGGTTGAGCGTTGTGAGC....................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGTTGTGAGCGAGTGT................................................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TATGTGTGAAGGCGACCACTT................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATCGCGTGAATGTGTGAAGGC......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GCGTGAATGTGTGAAGGCGA....................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................TCTGGCATTCGGTTCCGTG................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................AGCGTTGTGAGCGAGTGTGTG.............................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................GCGGTGAGGTTGAGCGTTGTG.......................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TGTATGTGATCGCGTGAATGT................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................GTGAAGCGGTGAGGTTG................................................................................... 17 0 2 1.00 2 0 0 2 0 0 0 0 0 0
.........................................................................................................................................................TAGCGGTGAGGTTGAGCGTTG............................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................AGGTCTGGCATTCGGTTCCGT.................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................GAAGCGGTGAGGTTGAGCGT.............................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................GGCTAGCTACGGTAGGTTT............................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ATGTGATCGCGTGAATGTGTG.............................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................GAAGCGGTGAGGTTGAGCGTT............................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................GGCTAGCTACGGTAGGTTTC.............................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................GAGCATTGTTGTTCC........................................................................................................................................................................................................ 15 1 5 0.80 4 0 0 0 0 2 2 0 0 0
.........................................................................ATAGTGCATGTGATCTG................................................................................................................................................................ 17 2 3 0.67 2 0 0 0 0 1 1 0 0 0
....................................AGCATTGTTGATTCCA...................................................................................................................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 0 0 1 0
.....................AAAAAGCAGCAGGAGA..................................................................................................................................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 1 0 0 0
........................................................................................................................................................TTTGCGGTGAGGTTGAGCGTT............................................................................. 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0
.................TTTTAAAAGGCAGCATTA....................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0
.....................................GCATTGTTGTTCCGAT..................................................................................................................................................................................................... 16 2 20 0.10 2 0 0 0 0 1 1 0 0 0
.................................................................................................................................................CCGCGGGGAAGCGGT.......................................................................................... 15 1 14 0.07 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................GAGCGAGTGTGTGTGTG.......................................................... 17 0 19 0.05 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................TGTGTGTGTGTGTGTGTAT................................................. 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0
..................................CGAGCATTGTTGTTCCGAT..................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................CGGGCGCGCCGCGGGG................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................CGAGTGTGTGTGTGTGTGT..................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 1
....................................................................................................................................................AGGTGAAGCGGTGAG....................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:18527382-18527631 - dsi_10118 GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T-T-TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGCGCGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAACTCGCAACAC-----------------------TCG---------------------CTCACACACACAC--ACACAC-------ATACACTAGCGCACTTA--------------------CACA--------------CTT------CCGCTGGTG--AA----TTCCTCGGGCAGCAGGA
droSec2 scaffold_8:1913006-1913253 - GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T-T-TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGCGCGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAACTCGCAACAC-----------------------TCG---------------------CTCACACC--CAC--ACACAC-------ATACACTAGCGCACTTA--------------------CACA--------------CTT------CCGCTGGTG--AA----TTCCTCGGGCAGCAGGA
dm3 chrX:19638101-19638344 - GAG-ATT--------------C--TCGCCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T-T-TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGCGCGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAAATCGCAACAC-----------------------TCGC---------------------ACA------CAC--ACACAC-------ATACACTAGCGCACTTA--------------------CACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAGGA
droEre2 scaffold_4690:9860270-9860508 - GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGC---T---TGGC----------------------------ACCCTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCATCGAAT---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGTGAGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAAATCGCAACAC-----------------------TCG-------------------------------CAC--ACACAC-------ATACACTAGCGCACTAA--------------------CACA--------------TTT------CCGATGGCG--AA----TTCCTCGGGCAGCAGGA
droYak3 X:11710402-11710648 + GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T---TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCCGTC---------------------GAT-------------------------GC-CATCCAAA---G---CA--ATAATTA----ACTTGGCCGCGAGG-----CG--CCACTGC---------GC-CAC----TT-----------CGCCACTC-CAACTCGCAACAC-----------------------TCG-------------------------------CAC--ACACAC-------ATACACTAGCGCACTAA--------------------CACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAGGA
droEug1 scf7180000409230:704449-704674 + GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTTATCAC----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CACCCAAA---G---AAAAAGAAAGT----ACTTGGCCAAAAAT-----C-------------------GT-ACC----TT-----------CGC-------AACTCGTAACAC-------------------------G-------------------------------CAC--ACACAT-------AGACACTAGCGCACTAA--------------------CACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAG--
droBia1 scf7180000302041:451994-452270 + GAGAATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTAGGGCACT-A-GCGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATCCGATC----------------GAT-------------------------GCCCAGCCAAA---GAACCA--AGA--------ACTTGCTGGCCCCACCAGA----------GGCCATTCCAAA-AAC----TT-----------CGC-------AACTCGTAACAC-----------------------ACG-------------------------------CTC--GCACAC-------AGACACAAGCGCACTAACACACACACACCCATACACACACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAGGA
droTak1 scf7180000414393:132861-133126 - GAG-ATT--------------C--TCGCCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTAGGC-ATT-ATCCGC----------------------------ACCTTCT-------------------------------------------------------------AACCAGACCGTAAGCCAA-GGCACCGATCCGATCGATCGATCGATCGATCGAA-------------------------GC-CAACCAAA---G---AA--AGCAGGA----ACTTGGCCACAAGG-----CAAACAAATG----------AA-AAC----TT-----------CGC-------AACTCGTAACAC-----------------------ACAC---------------------ACACACG--CAC--ACACAT-------AGACACTAGCGCACT----------------------------------AACAC--TT------CCGCTGGCG--GA-----GGAATTCGCAGCAGGA
droEle1 scf7180000491023:677379-677654 - GAG-ATT--------------C--TCG-CAGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC-GATC----------------GACTCGAGTGCCATCTAAAGCCCCCCC------CCCAAAA-AGA---A------AAAAAAATCTGGGCCGTAAGC-----C-------------------GT-AAC----TT-----------CGCAATCCGCAACTCGTAACAC-----------------------ACGCA------------TACA---CTCACACG--CACACACACAT-------AGACACTAGCGCACT----------------------------------AACAC--TT------CCGCTGGCC--AA--TATTCCTCGGGCAGCAGGA
droRho1 scf7180000779944:10265-10521 - GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTTATCAA----------------------------------------------------G-TA--AACCAGACCGTAAGCCAA-GGCACCGATC-GATC----------------GATTCGAGTGCCGTCT--A---------GC-C-CCTAAA---A---AA--AGA---A----ACTGGGCCGTAAAC-----C-------------------GT-AAC----TT-----------CGCAATCCGCAACTCGTAACTC--------------GT---------A----------------------ACATACG--CACACACACAT-------AGACACTTGCGCACT----------------------------------AACAC--TT------CCGCTGGCC--AA--TATTCCTCGGGCAGGAGG-
droFic1 scf7180000454073:1921641-1921890 - GAGAATT--------------C--TAGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTAATCAC----------------------------------------------------G-TA--CCACAGACCGTAAGCCAA-GCCATCGATC---------------------GACT--------------A---------GC-CACCCAAAA-AGA--CA--AGAGA---CAAACTTGGCCACAAC------C-------------------GTTATG----TTCGTA--AACTTCGC-------AACTCGTAATAC-----------------------ACG-------------------------------CAC--ACACATACCACACACGCA-TAGCGCACT----------------------------------AACAC--TT------CTGCTGGTT--AA--ATTTCCTCGGGCAGCAGGA
droKik1 scf7180000302696:489812-490134 - GAA-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-AGAACAACAAAGGTATGTTTTTCGC---A-C-CGAA-----------------------------------AT------------C-------------GCA-----AAAG--CTTGCATTTGCAAG-CA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GACTCGAGTGCTG--------CCCTCTTGC-CACCCAAAA--A---CA--A---ATA-CACCCTCGACGGCCCAGCCATA----------CGCC------AT-ATT--CGTT-----------CGCAATTCGTAACCCGTAATTC--------------GT---------ACCGTAACTCGTAACCACACTC-ACACAAG--CAC--ACACG--CCAC--ACTC------GCATATA--------------------CACACACACACTAACAC--TT------CCGCTGGCC--AGGCTCTTTTTCGGGCAGCAGGA
droAna3 scaffold_13417:2201170-2201421 + GAG-ATT--------------C--GCC-AGGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCGC---C-C-TGA-----------------------------------CCAGGCAA----A------------------A-----AAAG--CTTGCATCAGCAGG-CT--AACCAGACCGTAAGCCGA-GGCACTGATC---------------------GATACGGGTGCCA------GTCCCTCTT-C-CACTCGAAAAAGA------A-------------CACCCATA----------------------------------------------A--------------GACTCGTAACTC-----------------------TCAC---------------------ACATA----CAC--ACACAC-------ATACAC-AACGCACAAG--------------------TACACGCACACTAACG----------------------TC----TCCTGCGGACAGCGGCA
droBip1 scf7180000395983:27145-27383 - GAG-ATT--------------C--GCC-AGGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCGC---C-C-TGA-----------------------------------CCAG-------------------------GCA-----AAAG--CTTGCATCTGCAGG-CT--AACCAGACCGTAAGCCGA-GGCACTGATC---------------------GATACGGGTGCCA------GACCCTCTT-C-CACTCGAAAAAGA------AC--CCA-------------TA----------------------------------------------A--------------GACTCGTAACTC-----------------------TCAC---------------------ACATAC----------------------CACACAAACGCACAAG--------------------CACACGCACACTAACGC----------------------C----TCCTGCGGACAGCGGCA
dp5 XL_group1e:6531524-6531772 - G-G-TTC--------------G--TCGCCAGTTGAAAATTTTTCGTCCAACATTC-GGAACAACAAAGGTATGTTTTTCGA---C-C-CAGA-----------------------------------AA------------C-------------GCA-----ATACTAATTGCGTCTGCA--------AGCAAATTGTAAGCCTC-GGTATTGATCCAA--------------------T-------------------------CG-CATTGAAA---G---CA--AC--CCA----AAATACCCACGAGC-----A-------------------AT-CTT----GT-----------GGCGAACC-GAACTCATA---C-----------------------TGA---------------------AGCACACA--TAC--ACACAC-------ACGAACTTACGCATT----------------------------------AACATCTCC------CCGCTGTTG--AG------GCTTTGGCAGCAG--
droPer2 scaffold_21:1540979-1541227 - G-G-TTC--------------G--TCGCCAGTTGAAAATTTTTCGTCCAACATTC-GGAACAACAAAGGTATGTTTTTCGA---C-C-CAGA-----------------------------------AA------------C-------------GCA-----ATACTAATTGCGTCTGCA--------AGCAAATTGTAAGCCTC-GGTATTGATCCAA--------------------T-------------------------CG-CATTGAAA---G---CA--AC--CCA----AAATACCCACGAGC-----A-------------------AT-CTT----GT-----------GGCGAACC-GAACTCATA---C-----------------------TGA---------------------AGCACACA--TAC--ACACAC-------ACGAACTTACGCATT----------------------------------AACATCTCT------CCGCTGTTG--AG------GCTTTGGCAGCAG--
droWil2 scf2_1100000004963:1766869-1767111 - --------------------------------TAAAAGATTTTCGTCGTACTTTC-GGAACAACAAAGGTATGTTAAC-AC---C-T-GGAAAAAAA-----------GCGTAGAATCAAATTTAATAAA---------------GTAAAGAAACGCAACTAAATAATAAATGCATTCGCAAAGCAAAAAAAAAACCGTAAGTCTG-GGTATTAA---------------------------------------------AAC-----------------------------CCA----GC----------------------------------------AAACT----CACACA--------------------------CATGA----CCAATTGT-----------------------------------------CAC--CCACAT-------ACACATTAACACGCACA--------------------CACACATGCATTGACAT--C-------------------A----CTGCACAAGAAAAAGAA
droVir3 scaffold_13042:856027-856314 + GCT---CGTAACAGCGAGAATCGCCCAGCAGTTGAAAAATTTTCCTTGTACTTTCCGTAACAACAAAGGTATGTTTTTGAA---A-C-AAGC-----------------------------------ACAGCAA----AAACG-ATCAACAAAACGCAA-----------------------C-TA--ATACAAATTGTAAGCCAGTGGCACAAAT----------------------A-T--------TG--------CATTTA-----------T---G---CA--ACAATA--------CACGCACT------------------------------------------------------------------------------TAAGTATTTGTCATAAGCACGCACACATACATATATACACAC-ACACAGA--CAC--ACACAC-------ACACGCAATCACACATA--------------------CACA--------------TTTTCAACGCCGCTGGCTGTAA----AGGCTTTGGCAGCAGGC
droMoj3 scaffold_6328:2849853-2850117 + GAA-TTA--------------T--CCAGCAGTTGAAAAATTTTCATTGTACTTTCCGTAATAACAAAGGTATGTTTTTTTT---TCT-TTGCAACAA-----------GCACA-----------------ACAA-CAAAATCGTATCATCAGTACGCAA-----------------------C-TA--AAACAAATTGTAAAACAGTGACACAGAAT---------------------ATT---------G--------TATTTA-----------T---G---CA--A------------------------------------------------------CAA----CACACA--------------------------CGCAAACAAATATTTGTCATAAG-------------------------TTCACAAA--TAC--ACACAC-------ATTCCTACTTACACATA--------------------CACA--------------TTTTCAACGCCGCTGGCTGCAA----AGGCTTGGGCAGCAGGC
droGri2 scaffold_15081:1240008-1240265 + GTT---CGTAACAGCGACAAACTCCAAGCAGTTGGAAAATTTTCTTCGTACTTTCCGAAACAACAAAGGTATGTTTTTACC---A---AAGAAAAAAGAAATGAAAACGCACA-----------------ACAAACAAA--------ATCAGAATGCAA-----------------------T-TC--ACTCAAATTGTAAGCCAGTGGCTCA-AAT---------------------ATT---------G--------TATTTA-----------T---G---CA--A------------------------------------------------------CAA----CACACAA--------------CACTA---------------GTATTTGTCATAAGTTCG---------------------CTCACACG--TAC--ACACAC---------------CCACACATA--------------------CACA--------------TTT------C-------G--AA----TGCCGCTGGCTATAAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T-T-TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGCGCGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAACTCGCAACAC-----------------------TCG---------------------CTCACACACACAC--ACACAC-------ATACACTAGCGCACTTA--------------------CACA--------------CTT------CCGCTGGTG--AA----TTCCTCGGGCAGCAGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................CTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20138.0038324200000000000000
......................................................C-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18118.0018141300000000000000
................................TGAAAATTTTTCGTCGTACTCTC-GTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26111.001100000090100010000
................................TGAAAATTTTTCGTCGTACTCTC-GTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2817.00700010030200010000
....ATT--------------C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00410300000000000000
................................TGAAAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400200000000020000
....................................................CTC-GTAACAACAAAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00320000100000000000
.............................AGTTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00302100000000000000
........................................TTTCGTCGTACTCTC-GTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00310200000000000000
.....................................ATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300300000000000000
.......................................................................................................................................................................................................AAGCCAA-GGCACCGATC---------------------GAT-------------------------G.................................................................................................................................................................................................................................................................................................2113.00300000000000003000
.....TT--------------C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010100000000
................................TGAAAATTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000020000000000
.....................................................................TATGTTTTTCGT---T-T-TGGC----------------------------ACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000002000
................................TGAAAATTTTTCGTCGTACTCTC-GTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000100010000
.............................................TCGTACTCTC-GTAACAACAAAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
................................TGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
...............................TTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
.............................AGTTGAAAATTTTTCGTCGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000010000001000
......................................TTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200110000000000000
.......................................TTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
.......................................TTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
......................................TTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
.............................AGTTGAAAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...........................GCAGTTGAAAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
............................................GTCGTACTCTC-GTAACAACAAAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.............................AGTTGAAAATTTTTCGTCGTACTCTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
....................................................CTC-GTAACAACAAAGGTATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
....................................................CTC-GTAACAACAAAGGTATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..............................................CGTACTCTC-GTAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.............................................................................................................................................................................................................................................................................................A--AGAATTA----ACTTGGCCGCGC.....................................................................................................................................................................................................................................................2011.00100001000000000000
........................................................................................................................................................................................TA--CACCAGACCGTAAGCCAA-G............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..................................AAAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------------CTT------CCGCTGGTG--AA----TTCCTCG..........2311.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTG--AA----TTCCTCGGGCAGCAGTT2311.00100000000000001000
....................................................CTC-GTAACAACAAAGGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
................................TGAAAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.........................CGGCAGTTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
....ATT--------------C--TCGGCAGTTGAAAATTTTTCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
................................TGAAAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
...................................AAATTTTTCGTCGTACTCTC-GTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
...................................................TCTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...................................AAATTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.......................................TTTTCGTCGTACTCTC-GTAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
................................TGAAAATTTTTCGTCGTACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...........................GCAGTTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..........................GGCAGTTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTG--AA----TTCCTCGGGCAGCAGT.2211.00100000000000001000
..................................................CTCTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...................................AAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--AA----TTCCTCGGGCAGCAGGA2011.00100010000000000000
.....................C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
...................................................TCTC-GTAACAACAAAGGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
.....TT--------------C--TCGGCAGTTGAAAATTTTTCGTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.................................GAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTG--AA----TTCCTCGGGCAGCAG..2111.00100000000000001000
.....................C--TCGGCAGTTGAAAATTTTTCGTCGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
............................................GTCGTACTCTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
......................................TTTTTCGTCGTACTCTC-GTAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
...................................AAATTTTTCGTCGTACTCTC-GTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.............................AGTTGAAAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
....ATT--------------C--TCGGCAGTTGAAAATTTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACTTA--------------------CACA--------------CTT------CCGCTGGTG--AA----.................2611.00100010000000000000
......T--------------C--TCGGCAGTTGAAAATTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTG--AA----TTCCTCGGGC.......2011.00100000000000001000
.............................AGTTGAAAATTTTTCGTCGTACTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.....................................ATTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
........................................................................GTTTTTCGT---T-T-TGGC----------------------------ACCTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
............................................GTCGTACTCTC-GTAACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTG--AA----TTCCTCGGGCAG.....2111.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACTTA--------------------CACA--------------CTT------CCGCTG............................2111.00100000000000001000
...........................................................................................................................TTATCAA----------------------------------------------------G-TA--CACCAGACCGT.....................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
....................................................................................................................................................................................................CGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-C..............................................................................................................................................................................................................................................................................................2611.00110000000000000000
.................................................ACTCTC-GTAACAACAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
....................................AATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.....................C--TCGGCAGTTGAAAATTTTTCGTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...........................................CGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
droSec2
GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T-T-TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGCGCGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAACTCGCAACAC-----------------------TCG---------------------CTCACACC--CAC--ACACAC-------ATACACTAGCGCACTTA--------------------CACA--------------CTT------CCGCTGGTG--AA----TTCCTCGGGCAGCAGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................CTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030003
....................................................CTC-GTAACAACAAAGGTATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0031110
................................TGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200
........................................................GTAACAACAAAGGTATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020011
.....................................ATTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0022000
.....................................ATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
....................................AATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020110
....................................AATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
...............................................GTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021001
......................................................C-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
....................................................CTC-GTAACAACAAAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.............................AGTTGAAAATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
........................................TTTCGTCGTACTCTC-GTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
................................................TACTCTC-GTAACAACAAAGGTATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.................................GAAAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...........................................CGTCGTACTCTC-GTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
........................................TTTCGTCGTACTCTC-GTAACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.......................................TTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.......................................TTTTCGTCGTACTCTC-GTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
........................................................................................................................ACCTTATCAA----------------------------------------------------G-TA--CACCAGAC........................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.......................................TTTTCGTCGTACTCTC-GTAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
................................TGAAAATTTTTCGTCGTACTCTC-GTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
.....................................................TC-GTAACAACAAAGGTATGTTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
....................................AATTTTTCGTCGTACTCTC-GTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
......................................................C-GTAACAACAAAGGTATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................................TTTTCGTCGTACTCTC-GTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
..................................................CTCTC-GTAACAACAAAGGTATGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.....................C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
...................................................TCTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
......................................TTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..................................AAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...................................AAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................................................................................................................CAA----------------------------------------------------G-TA--CACCAGACCGTA....................................................................................................................................................................................................................................................................................................................................................................1811.0010010
......................................TTTTTCGTCGTACTCTC-GTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
........................................................................................................................................................................................................................................................................................................................................................................................GCAACAC-----------------------TCG---------------------CTCACACC--CAC--...............................................................................................................2111.0011000
................................TGAAAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.....................................ATTTTTCGTCGTACTCTC-GTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
....................................AATTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
............................................GTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
.AG-ATT--------------C--TCGGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...........................................CGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..................................AAAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..................................................................................................................................................................................................................................................................................................AATTA----ACTTGGCCGCGCGG-----C-------------------GC-C......................................................................................................................................................................................................................2311.0010010
dm3
GAG-ATT--------------C--TCGCCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T-T-TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGCGCGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAAATCGCAACAC-----------------------TCGC---------------------ACA------CAC--ACACAC-------ATACACTAGCGCACTTA--------------------CACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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............................................GTCGTACTCTC-GTAACAACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TCTC-GTAACAACAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TCTC-GTAACAACAAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTA--------------------CACA--------------CTT------CCGCTGGCG--AA----.................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................C-GTAACAACAAAGGTATGTTTTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................CGCCAGTTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................TCGTACTCTC-GTAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................GTTGAAAATTTTTCGTCGTACTCTC-GTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................TTGAAAATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................GAAAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................CTC-GTAACAACAAAGGTATGTTTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................TTTTTCGTCGTACTCTC-GTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................TTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................GTTTTTCGT---T-T-TGGC----------------------------ACCTTATCAA----------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGCCAGTTGAAAATTTTTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
....................................AATTTTTCGTCGTACTCTC-GTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CTC-CAAATCGCAACAC-----------------------TCG...................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTACTCTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TATGTTTTTCGT---T-T-TGGC----------------------------ACCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TA--CACCAGACCGTAAGCCAA-GGCACC.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droEre2
GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGC---T---TGGC----------------------------ACCCTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCATCGAAT---------------------GAT-------------------------GC-CATCCAAA---G---CA--AGAATTA----ACTTGGCCGTGAGG-----C-------------------GC-CAC----TT-----------CGCCACTC-CAAATCGCAACAC-----------------------TCG-------------------------------CAC--ACACAC-------ATACACTAGCGCACTAA--------------------CACA--------------TTT------CCGATGGCG--AA----TTCCTCGGGCAGCAGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................AAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030200100
...............................................GTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020001010
...................................AAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020100100
..............................................CGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020101000
........................................TTTCGTCGTACTCTC-GTAACAACAAAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
..............................................CGTACTCTC-GTAACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
......................................TTTTTCGTCGTACTCTC-GTAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
...................................AAATTTTTCGTCGTACTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................CGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.............................AGTTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.......................................TTTTCGTCGTACTCTC-GTAACAACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
....................................................CTC-GTAACAACAAAGGTATGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..G-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------TTT------CCGATGGCG--AA----TTCC.............1911.0011000000
..................................AAAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCG--AA----TTCCTCGGGCAGC....2111.0011000000
...........................GCAGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
....................................AATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
......................................TTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.................................GAAAATTTTTCGTCGTACTCTC-GTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
................................TGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..............................................CGTACTCTC-GTAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...................................AAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
........................................TTTCGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
droYak3
GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCGT---T---TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCCGTC---------------------GAT-------------------------GC-CATCCAAA---G---CA--ATAATTA----ACTTGGCCGCGAGG-----CG--CCACTGC---------GC-CAC----TT-----------CGCCACTC-CAACTCGCAACAC-----------------------TCG-------------------------------CAC--ACACAC-------ATACACTAGCGCACTAA--------------------CACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................TTCGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2719.00902000000007
...................................AAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00301010010000
..G-ATT--------------C--TCGGCAGTTGAAAATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000
....................................................CTC-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000
.........................CGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000
........................................TTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201000010000
......T--------------C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000000000
.....................................ATTTTTCGTCGTACTCTC-GTAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAA--------------------CACA--------------CTT------CCGCTGGC..........................2011.00100100000000
.....................C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.............................................................................................................................ATCAA----------------------------------------------------G-TA--CACCAGACCGT.....................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
GAG-ATT--------------C--TCGGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
...................................................................................................................................................................................................................................................................................................................................CACTGC---------GC-CAC----TT-----------CGCCACTC-..........................................................................................................................................................................................2111.00100100000000
..............................................CGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...............................................................................................................................CAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-.............................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
..............................................CGTACTCTC-GTAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................ACCGTAAGCCAA-GGCACCCGTC---------------------..............................................................................................................................................................................................................................................................................................................................2211.00101000000000
................................TGAAAATTTTTCGTCGTACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..G-ATT--------------C--TCGGCAGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
.......................................TTTTCGTCGTACTCTC-GTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................................GTCGTACTCTC-GTAACAACAAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
....ATT--------------C--TCGGCAGTTGAAAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................................ATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................GTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................AGTTGAAAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.....................................ATTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
...............................................GTACTCTC-GTAACAACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCGCACTAA--------------------CACA--------------CTT------CCGCT.............................2511.00101000000000
.....................................ATTTTTCGTCGTACTCTC-GTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
........................................TTTCGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..........................................TCGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................TTGAAAATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.................................GAAAATTTTTCGTCGTACTCTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
........................................................................GTTTTTCGT---T---TGGC----------------------------ACCT................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
................................TGAAAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.....TT--------------C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.......................................TTTTCGTCGTACTCTC-GTAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........................................CGTCGTACTCTC-GTAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................GTTGAAAATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
......T--------------C--TCGGCAGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.................................GAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
.....TT--------------C--TCGGCAGTTGAAAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.............................................................................TCGT---T---TGGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACC............................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......................................TTTTTCGTCGTACTCTC-GTAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
......................................................C-GTAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.................................GAAAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................TTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
....................................AATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............................................CGTACTCTC-GTAACAACAAAGGCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
....................................AATTTTTCGTCGTACTCTC-GTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..............................................CGTACTCTC-GTAACAACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
....ATT--------------C--TCGGCAGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..........................................TCGTCGTACTCTC-GTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000
............................................GTCGTACTCTC-GTAACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCG--AA----TTCCTCGGGCAGCAGGA2311.00101000000000
droEug1
GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTTATCAC----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GAT-------------------------GC-CACCCAAA---G---AAAAAGAAAGT----ACTTGGCCAAAAAT-----C-------------------GT-ACC----TT-----------CGC-------AACTCGTAACAC-------------------------G-------------------------------CAC--ACACAT-------AGACACTAGCGCACTAA--------------------CACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAG--SizeHit CountTotal NormTotal
No Reads
droBia1
GAGAATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTAGGGCACT-A-GCGC----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATCCGATC----------------GAT-------------------------GCCCAGCCAAA---GAACCA--AGA--------ACTTGCTGGCCCCACCAGA----------GGCCATTCCAAA-AAC----TT-----------CGC-------AACTCGTAACAC-----------------------ACG-------------------------------CTC--GCACAC-------AGACACAAGCGCACTAACACACACACACCCATACACACACA--------------CTT------CCGCTGGCG--AA----TTCCTCGGGCAGCAGGASizeHit CountTotal NormTotal
No Reads
droTak1
GAG-ATT--------------C--TCGCCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTAGGC-ATT-ATCCGC----------------------------ACCTTCT-------------------------------------------------------------AACCAGACCGTAAGCCAA-GGCACCGATCCGATCGATCGATCGATCGATCGAA-------------------------GC-CAACCAAA---G---AA--AGCAGGA----ACTTGGCCACAAGG-----CAAACAAATG----------AA-AAC----TT-----------CGC-------AACTCGTAACAC-----------------------ACAC---------------------ACACACG--CAC--ACACAT-------AGACACTAGCGCACT----------------------------------AACAC--TT------CCGCTGGCG--GA-----GGAATTCGCAGCAGGASizeHit CountTotal NormTotal
No Reads
droEle1
GAG-ATT--------------C--TCG-CAGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTTATCAA----------------------------------------------------G-TA--CACCAGACCGTAAGCCAA-GGCACCGATC-GATC----------------GACTCGAGTGCCATCTAAAGCCCCCCC------CCCAAAA-AGA---A------AAAAAAATCTGGGCCGTAAGC-----C-------------------GT-AAC----TT-----------CGCAATCCGCAACTCGTAACAC-----------------------ACGCA------------TACA---CTCACACG--CACACACACAT-------AGACACTAGCGCACT----------------------------------AACAC--TT------CCGCTGGCC--AA--TATTCCTCGGGCAGCAGGASizeHit CountTotal NormTotal
No Reads
droRho1
GAG-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTTATCAA----------------------------------------------------G-TA--AACCAGACCGTAAGCCAA-GGCACCGATC-GATC----------------GATTCGAGTGCCGTCT--A---------GC-C-CCTAAA---A---AA--AGA---A----ACTGGGCCGTAAAC-----C-------------------GT-AAC----TT-----------CGCAATCCGCAACTCGTAACTC--------------GT---------A----------------------ACATACG--CACACACACAT-------AGACACTTGCGCACT----------------------------------AACAC--TT------CCGCTGGCC--AA--TATTCCTCGGGCAGGAGG-SizeHit CountTotal NormTotal
No Reads
droFic1
GAGAATT--------------C--TAGGCAGTTGAAAATTTTTCGTCGTACTCTC-GTAACAACAAAGGTATGTTTTTCG-----------C----------------------------ACCTAATCAC----------------------------------------------------G-TA--CCACAGACCGTAAGCCAA-GCCATCGATC---------------------GACT--------------A---------GC-CACCCAAAA-AGA--CA--AGAGA---CAAACTTGGCCACAAC------C-------------------GTTATG----TTCGTA--AACTTCGC-------AACTCGTAATAC-----------------------ACG-------------------------------CAC--ACACATACCACACACGCA-TAGCGCACT----------------------------------AACAC--TT------CTGCTGGTT--AA--ATTTCCTCGGGCAGCAGGASizeHit CountTotal NormTotal
No Reads
droKik1
GAA-ATT--------------C--TCGGCAGTTGAAAATTTTTCGTCGTACTCTC-AGAACAACAAAGGTATGTTTTTCGC---A-C-CGAA-----------------------------------AT------------C-------------GCA-----AAAG--CTTGCATTTGCAAG-CA--CACCAGACCGTAAGCCAA-GGCACCGATC---------------------GACTCGAGTGCTG--------CCCTCTTGC-CACCCAAAA--A---CA--A---ATA-CACCCTCGACGGCCCAGCCATA----------CGCC------AT-ATT--CGTT-----------CGCAATTCGTAACCCGTAATTC--------------GT---------ACCGTAACTCGTAACCACACTC-ACACAAG--CAC--ACACG--CCAC--ACTC------GCATATA--------------------CACACACACACTAACAC--TT------CCGCTGGCC--AGGCTCTTTTTCGGGCAGCAGGASizeHit CountTotal NormTotal
No Reads
droAna3
GAG-ATT--------------C--GCC-AGGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCGC---C-C-TGA-----------------------------------CCAGGCAA----A------------------A-----AAAG--CTTGCATCAGCAGG-CT--AACCAGACCGTAAGCCGA-GGCACTGATC---------------------GATACGGGTGCCA------GTCCCTCTT-C-CACTCGAAAAAGA------A-------------CACCCATA----------------------------------------------A--------------GACTCGTAACTC-----------------------TCAC---------------------ACATA----CAC--ACACAC-------ATACAC-AACGCACAAG--------------------TACACGCACACTAACG----------------------TC----TCCTGCGGACAGCGGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................GTCGTACTCTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.006210021
...............................................GTACTCTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.006120030
..............................................CGTACTCTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.005020030
........................GCC-AGGTTGAAAATTTTTCGTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
.....................................ATTTTTCGTCGTACTCTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002010001
........................................TTTCGTCGTACTCTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002011000
..G-ATT--------------C--GCC-AGGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000011
.....................C--GCC-AGGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002002000
.........................................TTCGTCGTACTCTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...................................AAATTTTTCGTCGTACTCTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................C-AGGTTGAAAATTTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....TT--------------C--GCC-AGGTTGAAAATTTTTCGTCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................................TTTCGTCGTACTCTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
.................................GAAAATTTTTCGTCGTACTCTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
.........................................TTCGTCGTACTCTC-GGAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................CGTCGTACTCTC-GGAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....ATT--------------C--GCC-AGGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
...................................AAATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
........................................TTTCGTCGTACTCTC-GGAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................C--GCC-AGGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
..............................................CGTACTCTC-GGAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................C--GCC-AGGTTGAAAATTTTTCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................GTTGAAAATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
...................................AAATTTTTCGTCGTACTCTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
......T--------------C--GCC-AGGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
.....................................ATTTTTCGTCGTACTCTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
....................................AATTTTTCGTCGTACTCTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................TTTTCGTCGTACTCTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................TTTCGTCGTACTCTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.....................................ATTTTTCGTCGTACTCTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
GAG-ATT--------------C--GCC-AGGTTGAAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................................GAAAATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..G-ATT--------------C--GCC-AGGTTGAAAATTTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..G-ATT--------------C--GCC-AGGTTGAAAATTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..G-ATT--------------C--GCC-AGGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
................................................TACTCTC-GGAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................TTTCGTCGTACTCTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..G-ATT--------------C--GCC-AGGTTGAAAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................AGGTTGAAAATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................CGTCGTACTCTC-GGAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....TT--------------C--GCC-AGGTTGAAAATTTTTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
....ATT--------------C--GCC-AGGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.....................................ATTTTTCGTCGTACTCTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....TT--------------C--GCC-AGGTTGAAAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAC---------------------ACATA----CAC--ACACAC-------ATACAC-AAC........................................................................................2611.001010000
.................................................ACTCTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TA----CAC--ACACAC-------ATACAC-AACGCACAAG--------------------.............................................................2711.001100000
........................GCC-AGGTTGAAAATTTTTCGTCGTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.................................................ACTCTC-GGAACAACAAAGGTATGTTTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...................................AAATTTTTCGTCGTACTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................CTCTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....TT--------------C--GCC-AGGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....TT--------------C--GCC-AGGTTGAAAATTTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................AATTTTTCGTCGTACTCTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
....................................AATTTTTCGTCGTACTCTC-GT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................................TTTTTCGTCGTACTCTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
GAG-ATT--------------C--GCC-AGGTTGAAAATTTTTCGTCGTACTCTC-GGAACAACAAAGGTATGTTTTTCGC---C-C-TGA-----------------------------------CCAG-------------------------GCA-----AAAG--CTTGCATCTGCAGG-CT--AACCAGACCGTAAGCCGA-GGCACTGATC---------------------GATACGGGTGCCA------GACCCTCTT-C-CACTCGAAAAAGA------AC--CCA-------------TA----------------------------------------------A--------------GACTCGTAACTC-----------------------TCAC---------------------ACATAC----------------------CACACAAACGCACAAG--------------------CACACGCACACTAACGC----------------------C----TCCTGCGGACAGCGGCASizeHit CountTotal NormTotal
No Reads
dp5
G-G-TTC--------------G--TCGCCAGTTGAAAATTTTTCGTCCAACATTC-GGAACAACAAAGGTATGTTTTTCGA---C-C-CAGA-----------------------------------AA------------C-------------GCA-----ATACTAATTGCGTCTGCA--------AGCAAATTGTAAGCCTC-GGTATTGATCCAA--------------------T-------------------------CG-CATTGAAA---G---CA--AC--CCA----AAATACCCACGAGC-----A-------------------AT-CTT----GT-----------GGCGAACC-GAACTCATA---C-----------------------TGA---------------------AGCACACA--TAC--ACACAC-------ACGAACTTACGCATT----------------------------------AACATCTCC------CCGCTGTTG--AG------GCTTTGGCAGCAG--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................ATTC-GGAACAACAAAGGTATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030300000000
.....................................ATTTTTCGTCCAACATTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
.....................................ATTTTTCGTCCAACATTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.....................................ATTTTTCGTCCAACATTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
....................................AATTTTTCGTCCAACATTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020020000000
............................................GTCCAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020110000000
......................................TTTTTCGTCCAACATTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000020
.......................................TTTTCGTCCAACATTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020101000000
..G-TTC--------------G--TCGCCAGTTGAAAATTTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020110000000
.............................AGTTGAAAATTTTTCGTCCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000020
....................................................TTC-GGAACAACAAAGGTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
................................................AACATTC-GGAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020100100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCTCC------CCGCTGTTG--AG------G..............2111.0010100000000
.............................................................................................................................................................................................................................................................................................A--AC--CCA----AAATACCCACGAGC-----A-------------------..........................................................................................................................................................................................................................2111.0010100000000
..................................AAAATTTTTCGTCCAACATTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................TGCGTCTGCA--------AGCAAATTGTA....................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..G-TTC--------------G--TCGCCAGTTGAAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
G-G-TTC--------------G--TCGCCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................TGAAAATTTTTCGTCCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................ATTTTTCGTCCAACATTC-GGAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
.........................................TTCGTCCAACATTC-GGAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
...................................AAATTTTTCGTCCAACATTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................GAAAATTTTTCGTCCAACATTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
.....................................................................................................................................................................................................................GATCCAA--------------------T-------------------------CG-CATTGAAA---G---CA--AC--CCA----AA...............................................................................................................................................................................................................................................................2811.0010010000000
..............................................................................................................................................................................................................................................................................................................................A-------------------AT-CTT----GT-----------GGCGAACC-GAACT.....................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................AGC-----A-------------------AT-CTT----GT-----------GGCGAACC-GA........................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................ATTGATCCAA--------------------T-------------------------CG-CATTGAAA---G---................................................................................................................................................................................................................................................................................2211.0010100000000
...............................TTGAAAATTTTTCGTCCAACATTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................CGTCCAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................TTCGTCCAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
G-G-TTC--------------G--TCGCCAGTTGAAAATTTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
...............................................CAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................AAATTTTTCGTCCAACATTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................AATTTTTCGTCCAACATTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................CGTCCAACATTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000001000
............................................GTCCAACATTC-GGAACAACAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................................CCAACATTC-GGAACAACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.....................................................................TATGTTTTTCGA---C-C-CAGA-----------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.....................................ATTTTTCGTCCAACATTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................ACC-GAACTCATA---C-----------------------TGA---------------------AGCAC.........................................................................................................................2111.0010100000000
.......................................TTTTCGTCCAACATTC-GGAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
................................................AACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................ATTTTTCGTCCAACATTC-GGAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
.............................................................................................................................................................................................AGCAAATTGTAAGCCTC-GGTA.........................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................T----GT-----------GGCGAACC-GAACTCATA---C-----------------------T.....................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................GCA--------AGCAAATTGTAAGCCTC-G............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................AATTTTTCGTCCAACATTC-GGAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.................................................ACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
G-G-TTC--------------G--TCGCCAGTTGAAAATTTTTCGTCCAACATTC-GGAACAACAAAGGTATGTTTTTCGA---C-C-CAGA-----------------------------------AA------------C-------------GCA-----ATACTAATTGCGTCTGCA--------AGCAAATTGTAAGCCTC-GGTATTGATCCAA--------------------T-------------------------CG-CATTGAAA---G---CA--AC--CCA----AAATACCCACGAGC-----A-------------------AT-CTT----GT-----------GGCGAACC-GAACTCATA---C-----------------------TGA---------------------AGCACACA--TAC--ACACAC-------ACGAACTTACGCATT----------------------------------AACATCTCT------CCGCTGTTG--AG------GCTTTGGCAGCAG--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................CATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.007700000
....................................AATTTTTCGTCCAACATTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004301000
...................................AAATTTTTCGTCCAACATTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
........................................TTTCGTCCAACATTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
.....................................ATTTTTCGTCCAACATTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
...............................................CAACATTC-GGAACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
....................................AATTTTTCGTCCAACATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
......................................TTTTTCGTCCAACATTC-GGAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
...............................................CAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.........................................TTCGTCCAACATTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.............................AGTTGAAAATTTTTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
....................................AATTTTTCGTCCAACATTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
..G-TTC--------------G--TCGCCAGTTGAAAATTTTTCGTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
..........................................TCGTCCAACATTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................TTTTTCGTCCAACATTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...................................AAATTTTTCGTCCAACATTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
............................CAGTTGAAAATTTTTCGTCCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................TGAAAATTTTTCGTCCAACATTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................TTTTCGTCCAACATTC-GGAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................TTTTCGTCCAACATTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................AATTTTTCGTCCAACATTC-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................ATTC-GGAACAACAAAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................TTTTTCGTCCAACATTC-GGAACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100
.....................................ATTTTTCGTCCAACATTC-GGAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
....................................AATTTTTCGTCCAACATTC-GGAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................................ATTTTTCGTCCAACATTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACA--TAC--ACACAC-------ACGAACTTACGC......................................................................................2811.001010000
............................................GTCCAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................................AACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..................................................................................................................................................................................................................ATTGATCCAA--------------------T-------------------------CG-CATTGG.........................................................................................................................................................................................................................................................................................1911.001100000
..............................................CCAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................CGTCCAACATTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
droWil2
--------------------------------TAAAAGATTTTCGTCGTACTTTC-GGAACAACAAAGGTATGTTAAC-AC---C-T-GGAAAAAAA-----------GCGTAGAATCAAATTTAATAAA---------------GTAAAGAAACGCAACTAAATAATAAATGCATTCGCAAAGCAAAAAAAAAACCGTAAGTCTG-GGTATTAA---------------------------------------------AAC-----------------------------CCA----GC----------------------------------------AAACT----CACACA--------------------------CATGA----CCAATTGT-----------------------------------------CAC--CCACAT-------ACACATTAACACGCACA--------------------CACACATGCATTGACAT--C-------------------A----CTGCACAAGAAAAAGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................AAAGATTTTCGTCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00440000
.....................................GATTTTCGTCGTACTTTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00310200
.................................AAAAGATTTTCGTCGTACTTTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00211000
..................................AAAGATTTTCGTCGTACTTTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00220000
.......................................TTTTCGTCGTACTTTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.....................................GATTTTCGTCGTACTTTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
....................................AGATTTTCGTCGTACTTTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................AAGATTTTCGTCGTACTTTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
.................................AAAAGATTTTCGTCGTACTTTC-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.......................................TTTTCGTCGTACTTTC-GGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
........................................TTTCGTCGTACTTTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..................................................CTTTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................................CGTCGTACTTTC-GGAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.................................AAAAGATTTTCGTCGTACTTTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
.....................................GATTTTCGTCGTACTTTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
........................................................................GTTAAC-AC---C-T-GGAAAAAAA-----------GCGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...............................................GTACTTTC-GGAACAACAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...........................................CGTCGTACTTTC-GGAACAACAAAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..................................AAAGATTTTCGTCGTACTTTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...................................AAGATTTTCGTCGTACTTTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------A----CTGCACAAGAAAAAGA.1811.00100010
....................................AGATTTTCGTCGTACTTTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.....................................GATTTTCGTCGTACTTTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................AAAAGATTTTCGTCGTACTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................TCGTACTTTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
................................TAAAAGATTTTCGTCGTACTTTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.......................................TTTTCGTCGTACTTTC-GGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
..................................AAAGATTTTCGTCGTACTTTC-GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
....................................AGATTTTCGTCGTACTTTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
....................................................TTC-GGAACAACAAAGGTATGTTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..............................................CGTACTTTC-GGAACAACAAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...............................................................................AC---C-T-GGAAAAAAA-----------GCGTAGAATCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
......................................ATTTTCGTCGTACTTTC-GGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
...............................................GTACTTTC-GGAACAACAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...................................AAGATTTTCGTCGTACTTTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
......................................ATTTTCGTCGTACTTTC-GGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
........................................TTTCGTCGTACTTTC-GGAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
...............................................GTACTTTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................TTC-GGAACAACAAAGGTATGTTAAC-A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
................................................TACTTTC-GGAACAACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.........................................TTCGTCGTACTTTC-GGAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...........................................CGTCGTACTTTC-GGAACAACAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.......................................TTTTCGTCGTACTTTC-GGAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.......................................TTTTCGTCGTACTTTC-GGAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
................................................................................................................................................................................TCGCAAAGCAAAAAAAAA..........................................................................................................................................................................................................................................................................................................................................................................1820.50100010
droVir3
GCT---CGTAACAGCGAGAATCGCCCAGCAGTTGAAAAATTTTCCTTGTACTTTCCGTAACAACAAAGGTATGTTTTTGAA---A-C-AAGC-----------------------------------ACAGCAA----AAACG-ATCAACAAAACGCAA-----------------------C-TA--ATACAAATTGTAAGCCAGTGGCACAAAT----------------------A-T--------TG--------CATTTA-----------T---G---CA--ACAATA--------CACGCACT------------------------------------------------------------------------------TAAGTATTTGTCATAAGCACGCACACATACATATATACACAC-ACACAGA--CAC--ACACAC-------ACACGCAATCACACATA--------------------CACA--------------TTTTCAACGCCGCTGGCTGTAA----AGGCTTTGGCAGCAGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............AGCGAGAATCGCCCAGCAGTTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003000000000000000002010000000000000000000000000000000000000000000
..............CGAGAATCGCCCAGCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003000000000000000001000100000000000000000000000000000000000001000
...............GAGAATCGCCCAGCAGTTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000000000001000010000000000000000000000000000000000000000010
...............GAGAATCGCCCAGCAGTTGAAAAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000100000000000010000000000000000000000000000000000000000000000
..........................AGCAGTTGAAAAATTTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
....................TCGCCCAGCAGTTGAAAAATTTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002001000000000000001000000000000000000000000000000000000000000000
................AGAATCGCCCAGCAGTTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000002000000000000000000000000000000000000000000000
................................TGAAAAATTTTCCTTGTACTTTCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCCGCTGGCTGTAA----AGGC.............2212.002000200000000000000000000000000000000000000000000000000000000000
......CGTAACAGCGAGAATCGCCCAGCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000002000000000000000000000000000000000000000000000
....................................AAATTTTCCTTGTACTTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000001000000000000000000000000000000000000000000001
.....................................................TCCGTAACAACAAAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000200000000000000000000000000000000000
........TAACAGCGAGAATCGCCCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000100000000000000000000000000000000000000000000000
..............................GTTGAAAAATTTTCCTTGTACTTTCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002001000000000000000100000000000000000000000000000000000000000000
......CGTAACAGCGAGAATCGCCCAGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000002000000000000000000000000000000000000000000000
.......GTAACAGCGAGAATCGCCCAGCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000100000000000000000000000000000000000000000000000
.............GCGAGAATCGCCCAGCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
....................TCGCCCAGCAGTTGAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................TTTTCCTTGTACTTTCCGTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..........ACAGCGAGAATCGCCCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......GTAACAGCGAGAATCGCCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................ATTTTCCTTGTACTTTCCGTAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
...............GAGAATCGCCCAGCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
...............GAGAATCGCCCAGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................CAGTTGAAAAATTTTCCTTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ACAATA--------CACGCACT------------------------------------------------------------------------------TAAGTAT.................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
................................TGAAAAATTTTCCTTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCTGTAA----AGGCTTTGGCAGC....2311.001000000000000000000000000000000000000000000000000000000001000000
.....................................AATTTTCCTTGTACTTTCCGTAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................AAATTTTCCTTGTACTTTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GTAAGCCAGTGGCACAAAT----------------------A-T--------TG--------.........................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................CGCCCAGCAGTTGAAAAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............AGCGAGAATCGCCCAGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCTGGCTGTAA----AGGCTTTGGCA......2611.001001000000000000000000000000000000000000000000000000000000000000
................AGAATCGCCCAGCAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................TTTCCTTGTACTTTCCGTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..............CGAGAATCGCCCAGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.................GAATCGCCCAGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......GTAACAGCGAGAATCGCCCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CATTTA-----------T---G---CA--ACAATA--------CACGCACT------------------------------------------------------------------------------........................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.............GCGAGAATCGCCCAGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................AAATTTTCCTTGTACTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...................ATCGCCCAGCAGTTGAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........ACAGCGAGAATCGCCCAGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................TGTTTTTGAA---A-C-AAGC-----------------------------------ACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTGGCTGTAA----AGGC.............1811.001000000000000000000000000000000000000000000000000001000000000000
.CT---CGTAACAGCGAGAATCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................GCCCAGCAGTTGAAAAATTTTCCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
..........................AGCAGTTGAAAAATTTTCCTTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......CGTAACAGCGAGAATCGCCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..........ACAGCGAGAATCGCCCAGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
...............GAGAATCGCCCAGCAGTTGAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..........................AGCAGTTGAAAAATTTTCCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
............................................CTTGTACTTTCCGTAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TACAAATTGTAAGCCAGTG............................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
................AGAATCGCCCAGCAGTTGAAAAATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.....................CGCCCAGCAGTTGAAAAATTTTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
................................TGAAAAATTTTCCTTGTACTTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
...............GAGAATCGCCCAGCAGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.......................................TTTTCCTTGTACTTTCCGTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................GTTTTTGAA---A-C-AAGC-----------------------------------ACAGCAA----A.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
.........................CAGCAGTTGAAAAATTTTCCTTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
...............GAGAATCGCCCAGCAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..........................AGCAGTTGAAAAATTTTCCTTGTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.........................................TTCCTTGTACTTTCCGTAACAACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................TTGTACTTTCCGTAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...................ATCGCCCAGCAGTTGAAAAATTTTCCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................AAAATTTTCCTTGTACTTTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................GAATCGCCCAGCAGTTGAAAAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
..............CGAGAATCGCCCAGCAGTTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
..........................AGCAGTTGAAAAATTTTCCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAA----AGGCTTTGGCAGCAGGT2211.001100000000000000000000000000000000000000000000000000000000000000
................AGAATCGCCCAGCAGTTGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
..............................GTTGAAAAATTTTCCTTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGTAA----AGGCTTTGGCAG.....2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA--------------TTTTCAACGCCGCTGGC..........................2111.001000000000000000010000000000000000000000000000000000000000000000
......CGTAACAGCGAGAATCGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
......CGTAACAGCGAGAATCGCCCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................GC-----------------------------------ACAGCAA----AAACG-ATCAACAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.................GAATCGCCCAGCAGTTGAAAAATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................CGCCCAGCAGTTGAAAAATTTTCCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
.......................................TTTTCCTTGTACTTTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................ACAAATTGTAAGCCAGTGGCA.........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
..............................................TGTACTTTCCGTAACAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACACAC-ACACAGA--CAC--AC.............................................................................................................2230.331001000000000000000000000000000000000000000000000000000000000000
droMoj3
GAA-TTA--------------T--CCAGCAGTTGAAAAATTTTCATTGTACTTTCCGTAATAACAAAGGTATGTTTTTTTT---TCT-TTGCAACAA-----------GCACA-----------------ACAA-CAAAATCGTATCATCAGTACGCAA-----------------------C-TA--AAACAAATTGTAAAACAGTGACACAGAAT---------------------ATT---------G--------TATTTA-----------T---G---CA--A------------------------------------------------------CAA----CACACA--------------------------CGCAAACAAATATTTGTCATAAG-------------------------TTCACAAA--TAC--ACACAC-------ATTCCTACTTACACATA--------------------CACA--------------TTTTCAACGCCGCTGGCTGCAA----AGGCTTGGGCAGCAGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA--------------------CACA--------------TTTTCAACGCC................................1811.001100000
...............................TTGAAAAATTTTCATTGTACTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....TA--------------T--CCAGCAGTTGAAAAATTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCCGCTGGCTGCAA----AGG..............2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCAA----AGGCTTGGGCAGC....2211.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCGCTGGCTGCAA----AGGCT............2211.001100000
..A-TTA--------------T--CCAGCAGTTGAAAAATTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
..............................GTTGAAAAATTTTCATTGTACTTTCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.............................................TTGTACTTTCCGTAATAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................CTTTCCGTAATAACAAAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................GTACTTTCCGTAATAACAAAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................AATTTTCATTGTACTTTCCGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................................ATTGTACTTTCCGTAATAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..A-TTA--------------T--CCAGCAGTTGAAAAATTTTCATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................GCAGTTGAAAAATTTTCATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....TTA--------------T--CCAGCAGTTGAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................ATTGTAAAACAGTGACACAGA.....................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GTT---CGTAACAGCGACAAACTCCAAGCAGTTGGAAAATTTTCTTCGTACTTTCCGAAACAACAAAGGTATGTTTTTACC---A---AAGAAAAAAGAAATGAAAACGCACA-----------------ACAAACAAA--------ATCAGAATGCAA-----------------------T-TC--ACTCAAATTGTAAGCCAGTGGCTCA-AAT---------------------ATT---------G--------TATTTA-----------T---G---CA--A------------------------------------------------------CAA----CACACAA--------------CACTA---------------GTATTTGTCATAAGTTCG---------------------CTCACACG--TAC--ACACAC---------------CCACACATA--------------------CACA--------------TTT------C-------G--AA----TGCCGCTGGCTATAAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........ACAGCGACAAACTCCAAGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
....................................AAATTTTCTTCGTACTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/19/2015 at 05:29 AM