ID:

dsi_10100

 Coordinate:

2l:12806998-12807064 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.0

Flybase annnotation

exon [2l_12807065_12807696_-]; CDS [2l_12807065_12807696_-]; CDS [2l_12806156_12806997_-]; exon [2l_12805686_12806997_-]; intron [2l_12806998_12807064_-]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------##################################################
TTTCTACTTTGAGAATTGTCGCGGAGGATGTGAGGAAGACATTGCCGAGGGTAAACTATTATAACAAAACACCATTGAGTCGTATTTATATTAAAGGTAATTCTTTTTGTTCAACAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAG
**************************************************............(((((((.(((.((((............)))).)))......)))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
 M023
head
 M025
embryo
 O001
Testis
........................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGAC.................. 29 0 1 40.00 40 38 0 0 2 0 0 0 0 0 0 0
.......TTTGAGAATTGTCGCGGAGGATGTGA...................................................................................................................................... 26 0 1 34.00 34 23 6 0 2 0 0 0 1 0 2 0
..TCTACTTTGAGAATTGTCGCGGAGGA........................................................................................................................................... 26 0 1 31.00 31 26 3 0 1 0 1 0 0 0 0 0
.TTCTACTTTGAGAATTGTCGCGGAGGA........................................................................................................................................... 27 0 1 28.00 28 25 3 0 0 0 0 0 0 0 0 0
.................................................................................................................GAGGACATAGACTGCTACTTCAAAGGC........................... 27 3 1 26.00 26 25 1 0 0 0 0 0 0 0 0 0
.........TGAGAATTGTCGCGGAGGATGTGAGGA................................................................................................................................... 27 0 1 18.00 18 15 0 1 1 0 1 0 0 0 0 0
.............................................................................................................................TGCTACTTCAAAGGCCAAATGGACT................. 25 0 1 13.00 13 13 0 0 0 0 0 0 0 0 0 0
............................TGTGAGGAAGACATTGCCGAGGACA.................................................................................................................. 25 2 1 11.00 11 8 0 2 1 0 0 0 0 0 0 0
....TACTTTGAGAATTGTCGCGGAGGA........................................................................................................................................... 24 0 1 11.00 11 9 0 1 0 0 1 0 0 0 0 0
............................TGTGAGGAAGACATTGCCGAGGACATA................................................................................................................ 27 3 1 10.00 10 2 1 2 0 5 0 0 0 0 0 0
........................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGA................... 28 0 1 7.00 7 6 1 0 0 0 0 0 0 0 0 0
.......TTTGAGAATTGTCGCGGAGGATGTG....................................................................................................................................... 25 0 1 7.00 7 5 1 1 0 0 0 0 0 0 0 0
........................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGACT................. 30 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0
....TACTTTGAGAATTGTCGCGGAGGATG......................................................................................................................................... 26 0 1 5.00 5 0 0 3 1 1 0 0 0 0 0 0
................TGTCGCGGAGGATGTGAGGAAGACAT............................................................................................................................. 26 0 1 5.00 5 1 0 4 0 0 0 0 0 0 0 0
TTTCTACTTTGAGAATTGTCGCGGA.............................................................................................................................................. 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
....TACTTTGAGAATTGTCGCGGAGGATGTGA...................................................................................................................................... 29 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGG.................... 27 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
.........TGAGAATTGTCGCGGAGGATGTGAGG.................................................................................................................................... 26 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................GGCCAAATGGACTTTGGTGGCTCCAAGG.. 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
..........................................................................TTGAGTCGTATTTATATTAAAGG...................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
.......TTTGAGAATTGTCGCGGAGGATGTGAG..................................................................................................................................... 27 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
.....ACTTTGAGAATTGTCGCGGAGGATGTGA...................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
TTTCTACTTTGAGAATTGTCGCGGAGGA........................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......TTTGAGAATTGTCGCGGAAGATGTGA...................................................................................................................................... 26 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0
...........................................................................TGAGTCGTATTTATATTAAAGGTAAT.................................................................. 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GACTGCTACTTCAAAGGCCAAATGGA................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ACAGACATAGACTGCTACTTCAAAGGCCAAA....................... 31 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GACGACATAGACTGCTACTTCAAAGGC........................... 27 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTTTTGTTCAACAGACATAGACTGC....................................... 25 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGACTT................ 31 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GAGGACATAGACTGCTACTTCAAAGGCCAA........................ 30 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...............TTGTCGCGGAGGATGTGAGGAAGACAT............................................................................................................................. 27 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0
.......TTTGAGAATTGTCGCGGAGGATGTGAGGA................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGCTACTTCAAAGGCCAAATGGACTT................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...CTACTTTGAGAATTGTCGCGGAGGA........................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GACTGCTACTTCAAAGGCCAAATGGACT................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CAACAGACATAGACTGCTACTTCAAA.............................. 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TTTTGTTCAACAGACATAGACTGC....................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..TCTACTTTGAGAATTGTCGCGGA.............................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................ATGTGAGGAAGACATTGCCGAGGACA.................................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..TCTACTTTGAGAATTGTCGCGGAGGATG......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................TAAAGGTAATTCTTTTTGTTCAACAGACA............................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........TTGAGAATTGTCGCGGAGGATGTGAGGA................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GAGGACATAGACTGCTACTTCAAA.............................. 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.TTCTACTTTGAGAATTGTCGCGGAGGAT.......................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............................TGTGAGGAAGACATTGCCGAGGAC................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................ATGTGAGGAAGACATTGCC......................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......TTTGAGAATTGTCGCGGAGGATG......................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..TCTACTTTGAGAATTGTCGCGGAGGATGTGA...................................................................................................................................... 31 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...CTACTTTGAGAATTGTCGCGGAG............................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..................TCGCGGAGGATGTGAGGAAGACATT............................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................GACATTGCCGAGGGTAAACTA............................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
.........TGAGAATTGTCGCGGAGGATGTGAG..................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................TAACAAAACACCATTGAGTCGTATTTA............................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
TTTCTACTTTGAGAATTGTCGCG................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....TGCTTTGAGAATTGTCGCGGA.............................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
......CTTTGAGAATTGTCGCGGAGGA........................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........TTGAGAATTGTCGCGGAGGATGTGAGG.................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATGGACTTTGGTGGCTCCAA.... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
............................TGTGAGGAAGACATTGCCGAGGACAA................................................................................................................. 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........TTGAGAATTGTCGCGGAGGAT.......................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................TGTGAGGAAGACATTGCCGAGGACAT................................................................................................................. 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........TTAGAATTGTCGCGGAGGATGTGAGG.................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
......CTTTGAGAATTGTCGCGGAGGATGT........................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................GACTGCTACTTCAAAGG............................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................TCGCGGAGGATGTGAGGAAGACAT............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................GAGGACATAGACTGCTACTTCAAAGG............................ 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GACATAGACTGCTACTTCAAAGGC........................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AGACATAGACTGCTACTTCAAAGGCCAAA....................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTTCAACAGACATAGACTGC....................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.TTCTACTTTGAGAATTGTCGCGGA.............................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................TTGAGTCGTATTTATATTAAAGGTA.................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................TGTCGCGGAAGATGTGAGGAAGACAT............................................................................................................................. 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.TTCTACTTTGAGAATTGTCGCGG............................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TGTTCAACAGACATAGACTGCTACTTCAAAA............................. 31 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......TTTGAGAATTGTCGCGGAGGAT.......................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.TTCTACTTTGAGAATTGTCGC................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................TAGACTGCTACTTCAAAGG............................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........TGAGAATTGTCGCGGTGGATGTGAGGA................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................TATTATAACAAAACACCATTGAGTCGTA................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............ATTGTCGCGGAGGATGTGA...................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................CTTCAAAGGCCAAATGGACTT................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.......TTTGAGAATGGTCGCGGAGGATGTGA...................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................TGTCGCGGAGGATGTGAGGAAGACAA............................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................CAAATGGACTTTGGTGGCTCCAAGGA. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......TTTGAGAATTGTCGCGGAGGATGT........................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..TCTACTTTGAGAATTGTCGCGGAGG............................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TAGGACATAGACTGCTACTTC................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTCAAAGGCCAAATGGACTTTGGTGGC......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................GTCGTATTTATATTAAAGGTA.................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATAGACTGCTACTTCAAAGGCC.......................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.......TTTGAGAATTGTCGCGGAGGATGTA....................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TTCAACAGACATAGACTGCTACTTCAA............................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........TTGAGAATTGTCGCGGAGGATG......................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............TTGTCGCGGAGGATGTGAGGAAGACATT............................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTTCAACAGACATAGACTGCTACTT.................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......TTTGAGAATTGTCGCGGAG............................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................TCAACAGACATAGACTGTCACTTCAAAGGC........................... 30 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....TACTTTGAGAATTGTCGCGGAGGATGTG....................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........TTGAGAATTGTCGCGGAGGATGTGA...................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....TACTTTGAGAATTGTCGCGGAGGATGT........................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................TTGAGTCGTATTTATATTAAAGGTAAT.................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................ATAGACTGCTACTTCAAAGGCCAAATGGAC.................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........TTGAGAATTGTCGCGGAAGATGTG....................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....TACTTTGAGAATTGTCGCGGAAGA........................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......CTTTGAGAATTGTCGCGGAGGATGTGA...................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....TACTTTGAGAATTGTCGCGGAGGATGTGC...................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.TTCTACTTTGAGAATTGTCGCGGAGG............................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................AGGACATAGACTGCTACTTCAAAGGCCAA........................ 29 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....TACTTTGAGAATTCTGGCCGA.............................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0
....TACTTTGAGAATTCTGGC................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
...........................................................................TGAGTCGTATTAATAT............................................................................ 16 1 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
.........TGAGAGTTGTAGCGTAGG............................................................................................................................................ 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AAAGATGAAACTCTTAACAGCGCCTCCTACACTCCTTCTGTAACGGCTCCCATTTGATAATATTGTTTTGTGGTAACTCAGCATAAATATAATTTCCATTAAGAAAAACAAGTTGTCTGTATCTGACGATGAAGTTTCCGGTTTACCTGAAACCACCGAGGTTCCTC
**************************************************............(((((((.(((.((((............)))).)))......)))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
..................................................................................................................GTCTGTATCTGACGATGAAGT................................ 21 0 1 1.00 1 0 1 0 0
.........................CCTACACTCCTTCTGTAACGGCTCCC.................................................................................................................... 26 0 1 1.00 1 0 0 1 0
................................................................................................................TTGTCTGTATCTGACGATGAAGTTT.............................. 25 0 1 1.00 1 1 0 0 0
....................................................................................................................CTGTAGCTGAAGCTGAAGTTTC............................. 22 3 7 0.14 1 1 0 0 0
.......................................................................................................................................................ACCACCGAGGTTCGT. 15 1 12 0.08 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:12806948-12807114 - dsi_10100 TTTCTACTTTGAGAATTGTCGCGGAGGATGTGAGGAAGACATTGCCGAGGGTAAACT-ATTATAA--CAAAACACC-------ATTGA--------------------------------------------------GTCGTATTTATATTAAAGGT-AA------TTCT---------------------------------------------TTTTGTTCAACAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAG
droSec2 scaffold_16:1340948-1341111 - TTTCTACTTTGAGAATTGTCGCGGACGATGTGAGGAAGACATTGCCGAGGGTAAAAT-ATAAC-----AAAACACC-------ATGTT--------------------------------------------------GTCGTGTTTATATTAAAGGC-AC------TTCT---------------------------------------------TTTTGTTCAACAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAG
dm3 chr2L:13186215-13186382 - CTTCTACTTTGAGAATTGTCGCGGACGATGTGAGGAAGACATTGCCGAGGGTAAAAT-ATTATAA--CAAACTACC-------TTTAA--------------------------------------------------GTCGTATATATATTAAATTT-AC------TCCTT--------------------------------------------TTTTTTTCATCAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGACTCCAAGGAG
droEre2 scaffold_4929:12254039-12254198 + TTTCTACTTCGAGAACTGTCGCGGACGATGTGAGGAGGACATAGCCGAGGGTAAAAT-ATTAC----TAAATTACT-------ATTAA--------------------------------------------------GTCGTATTTATATTAAATGC-AT--------------------------------------------------------GTGTTTTATCAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAG
droYak3 2L:9609816-9609978 - TTTCTACTTCGAGAACTGTCGTGGACGATGTGAGGAGGACATTGCCGAGGGTAAAAT-ATTGC----CAAAACACT-------TTTAA--------------------------------------------------GTCGTATTTATATA-TATT-----------------------------------------------------TAATATTTTTTTTTATCAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAG
droEug1 scf7180000409554:211127-211287 + TTTTTACTTCGAGAATTGTCGCGGGCGCTGTGAGGAAGATATAGCTGAGGGTAAGAT-CGCATACAG--ATAT-CC-T------------------------------------AGATAAAT-------------------------------------------------------TATAATTTTTAAT--------------------TAATA--ACTTTTTATCAGACATAGACTGTTACTTCAAAGGCCAAATGGACTTTGCTGGCTCTAAGGAG
droBia1 scf7180000301518:371954-372117 - TTTCTACTTTGAGAATTGTCGCGGACGATGTGAGGAAGACATTGCCGAGGGTAAGAT-TACAA--------------------------------------------------------------TGAATG---------------TA--TAGAATGAC-------------T--GTTTTTACTTATAAC------------------TACAAT--AATTTATTAACAGACCTAGACTGCTATTTCAAAGATCAAATGGACTTTGCAGGCTCCAAAGAG
droTak1 scf7180000415876:158012-158172 - TTTCTACTTCGAGAATTGTCGCGGACGATGTGAAGAAGACATTGCCGAGGGTAAGAA-GATCT-----A--------GATCTT-------------------------------------------------------GAC-------------------------------TTTGATTTAACTTATAAT------------------AAAAATATCTTTCTTATACAGACATAGACTGCTATTTCAAAGGCCAAATGGACTTTGCTGGCTCCAAGGAG
droEle1 scf7180000491028:1896507-1896670 + TTTCTACTTCGAGAACTGTCGCGGTGGCTGTGAGGAAGACCTAGCTGAGGGTAAGAT-CACAC----------------------TCA--------------------------------------------------GTCGGCTTTAAATAATAGGT-----------------GTTGTTACTTATAA------------------------T-ATCACATTTTACAGACATAGACTGCTATTTCAAGGGCCAAATGGACTTTGCCGGCTCCAAGGAG
droRho1 scf7180000779760:33311-33478 + TTTCTACTTCGAGAATTGTCGCGGGCGTTGTGAGGAAGACATTGCTGAGGGTAAGAT-AACAC--------------------------------------------------------------TGAACGTCTAGAAGTCA---------------------------------GTTTAAATGTATAATCACACACA--------------TT-AACTTATTTTACAGACATAGACTGCTATTTTAAAGGCCAAATGGACTTTGCCGGCTCCAAGGAG
droFic1 scf7180000454115:1010814-1010972 + TTTCTACTTCGAAAATTGCCGCGGGCGCTGTGAAGAGGACATAGCCGAGGGTAATAT-AGCA-------ATATACC-------TTTCT--------------------------------------------------AC-------------------------------------TTTGATTTTTAAT------------------ACAAGCACTCTTAATCAACAGACATAGACTGCTATTTCAAGGGCCAAATGGACTTTGCAGGCTCCAAGGAG
droKik1 scf7180000302472:1608135-1608291 - TTTCTACTTTGAGAATTGCCGCGGGCGCTGTGAAGAGGACATTGCAGAGGGTAAGAT-TTTCC-----A--------ATTCCCATAGG--------------------------------------------------GAC-------------------------------TCTTGGCTAAC---------------------------TAATGCCCCGCCTTTCCAGACATAGACTGCTATTTCAAAGGACAAATGGACTTTGCCGGCTCCAAGGAG
droAna3 scaffold_12916:12259561-12259712 + dan_677 CTTTTACTTTGAGAACTGTCGGGGACGGTGCGAAGAGGACATTGTCGAAGGTAATAA-TTCA---------------AT----AT--------------------TCAAAAAAA-----------------------------------------------------------------------------AGAAAAACT----------AAATATTTTTTATTTGCAGACATAGACTGCTACTTTAAAGGCCACATGGACTTTGCCGGCTCCAAGGAG
droBip1 scf7180000396769:604350-604510 + CTTTTACTTTGAAAACTGTCGAGGACGGTGCGAAGAGGATATCGTCGAAGGTTTATT-AATTT----------ATTA------TTTTTA---------------TTACATAACA-----------------------------------------------------------------------------AACCGAATCAAGT---------AATTTTTTATCCGCAGATATAGACTGCTACTTTAAAGGCCAAATGGACTTTGCTGGATCCAAGGAG
dp5 4_group4:906892-907062 - CTTTTACTTTGAGAATTGTCGCGGACGCTGTGAGGAGGATATAGCCGAGGGTAAGAT-CTGATCCA-----------T------------------------------------AGCTGATCCATTGAATC-----------------TCTTCAATGC-ATCTCTCT-------------------------CC--CT---------------CTCTCTCTCTCTGTAGACATAGACTGCTATTTCAAAAGTCAAATGGAGCTGGCTGGCTCTAATGAG
droPer2 scaffold_46:154203-154375 + CTTTTACTTTGAGAATTGTCGCGGACGCTGTGAGGAGGATATAGCCGAGGGTAAGAT-CTGATCCA-----------T------------------------------------AGCTGAACCATTGAA----------TCGC-------TTCAATGC-ATCTCTCT-------------------------CCCTCT---------------CTCTCTCTCTCTGTAGACATAGACTGCTATTTCAAAAGTCAAATGGAGCTGGCTGGCTCTAATGAG
droWil2 scf2_1100000004516:3314991-3315154 - TTTTTATTTCGAAAATTGTCGCGGACGCTGTGAGGAGGACATAGCTGAGGGTAAGTT-ATAAG---------GATA-------TTTGTG---------------CTTCCTGAAAAGCCAAATGATTGAA-----------------------------------------------------------------------------------ACTTTTTCTGTTTGTAGACATAGACTGCTACTTCAAAAGCCAATTGGACTTTGCTGGTGCAAAGGAG
droVir3 scaffold_12963:7063446-7063598 - CTTCTATTTCGAGAACTGTCGCAGTCGCTGCGAGGAGGATATTGTTGAGGGTAAGTATCGGTATCA-----------AT----TT--------------------TGTATAATA-----------------------------------------------------------------------------AAATGAAATAAATATTT--CGCTGCGTTTCCTTTACAGACATAGACTGTTACTTAAAGAGCCAAATGGAG------------AAGGAG
droMoj3 scaffold_6500:26253990-26254155 - CTTTTACTTTGAAAACTGCCGCGGACGCTGCGAGGAAGACATTGTCGAGGGTAAATATTA-T-------ATTTATA-------TTTATGACAAGAAACTCAATAATACATAAAA-----------------------------------------------------------------------------ATATAATTAATAT---------ATACATATATTTGCAGACATAGACTGTTACTTCAAGAGCCAAATGGAG------------AAGGAA
droGri2 scaffold_15252:10216778-10216925 - TTTCTACTTTGAGAACTGTCGCGGTCGCTGCGAGGAGGACATTGTTGAGGGTAAGTGTTGCT-------ATGTAAA-------TTTGT--------------------------------------------------GTAATATTTAAATCAA-TT-----------------------------------------------------CGTTG-CTTTATTCTGCAGACATAGACTGCTATTTCAAGGGCAAAATGGAG------------AAGGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCTACTTTGAGAATTGTCGCGGAGGATGTGAGGAAGACATTGCCGAGGGTAAACT-ATTATAA--CAAAACACC-------ATTGA--------------------------------------------------GTCGTATTTATATTAAAGGT-AA------TTCT---------------------------------------------TTTTGTTCAACAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGAC..................29140.0040000000382000000000
.......TTTGAGAATTGTCGCGGAGGATGTGA......................................................................................................................................................................................................................................................26134.0034002000232601000000
..TCTACTTTGAGAATTGTCGCGGAGGA...........................................................................................................................................................................................................................................................26131.0031000000261310000000
.TTCTACTTTGAGAATTGTCGCGGAGGA...........................................................................................................................................................................................................................................................27128.0028000000250300000000
.........TGAGAATTGTCGCGGAGGATGTGAGGA...................................................................................................................................................................................................................................................27118.0018000000151010010000
.............................................................................................................................................................................................................................................TGCTACTTCAAAGGCCAAATGGACT.................25113.0013000000130000000000
....TACTTTGAGAATTGTCGCGGAGGA...........................................................................................................................................................................................................................................................24111.001100000090010010000
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGA...................2817.00700000060100000000
.......TTTGAGAATTGTCGCGGAGGATGTG.......................................................................................................................................................................................................................................................2517.00700000050100010000
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGACT.................3015.00500000040100000000
....TACTTTGAGAATTGTCGCGGAGGATG.........................................................................................................................................................................................................................................................2615.00500000001000031000
................TGTCGCGGAGGATGTGAGGAAGACAT.............................................................................................................................................................................................................................................2615.00500000010000040000
TTTCTACTTTGAGAATTGTCGCGGA..............................................................................................................................................................................................................................................................2514.00400000040000000000
....TACTTTGAGAATTGTCGCGGAGGATGTGA......................................................................................................................................................................................................................................................2914.00400000040000000000
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGG....................2714.00400000040000000000
.........TGAGAATTGTCGCGGAGGATGTGAGG....................................................................................................................................................................................................................................................2613.00300000020000010000
.........................................................................................................................................................................................................................................................GGCCAAATGGACTTTGGTGGCTCCAAGG..2813.00300000030000000000
....................................................................................TTGA--------------------------------------------------GTCGTATTTATATTAAAGG..........................................................................................................................2313.00300000030000000000
.......TTTGAGAATTGTCGCGGAGGATGTGAG.....................................................................................................................................................................................................................................................2713.00300000020000010000
.....ACTTTGAGAATTGTCGCGGAGGATGTGA......................................................................................................................................................................................................................................................2813.00300000030000000000
TTTCTACTTTGAGAATTGTCGCGGAGGA...........................................................................................................................................................................................................................................................2812.00200000020000000000
.....................................................................................TGA--------------------------------------------------GTCGTATTTATATTAAAGGT-AA------T...............................................................................................................2612.00200000010100000000
..........................................................................................................................................................................................................................................GACTGCTACTTCAAAGGCCAAATGGA...................2612.00200000020000000000
.................................................................................................................................................................................................................................ACAGACATAGACTGCTACTTCAAAGGCCAAA.......................3112.00200000020000000000
..........................................................................................................................................................................T---------------------------------------------TTTTGTTCAACAGACATAGACTGC.......................................2512.00200000010010000000
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGACTT................3112.00200000020000000000
...............TTGTCGCGGAGGATGTGAGGAAGACAT.............................................................................................................................................................................................................................................2712.00200000000101000000
.......TTTGAGAATTGTCGCGGAGGATGTGAGGA...................................................................................................................................................................................................................................................2912.00200000020000000000
.............................................................................................................................................................................................................................................TGCTACTTCAAAGGCCAAATGGACTT................2612.00200000020000000000
...CTACTTTGAGAATTGTCGCGGAGGA...........................................................................................................................................................................................................................................................2512.00200000020000000000
..........................................................................................................................................................................................................................................GACTGCTACTTCAAAGGCCAAATGGACT.................2812.00200000020000000000
...............................................................................................................................................................................................................................CAACAGACATAGACTGCTACTTCAAA..............................2612.00200000010100000000
........................................................................................................................................................................................................................TTTTGTTCAACAGACATAGACTGC.......................................2412.00200000020000000000
..TCTACTTTGAGAATTGTCGCGGA..............................................................................................................................................................................................................................................................2312.00200000020000000000
..TCTACTTTGAGAATTGTCGCGGAGGATG.........................................................................................................................................................................................................................................................2811.00100000010000000000
.......................................................................................................................................................TAAAGGT-AA------TTCT---------------------------------------------TTTTGTTCAACAGACA...............................................2911.00100000000100000000
........TTGAGAATTGTCGCGGAGGATGTGAGGA...................................................................................................................................................................................................................................................2811.00100000010000000000
.TTCTACTTTGAGAATTGTCGCGGAGGAT..........................................................................................................................................................................................................................................................2811.00101000000000000000
............................TGTGAGGAAGACATTGCCGAGGAC...................................................................................................................................................................................................................................2411.00100000010000000000
...........................ATGTGAGGAAGACATTGCC.........................................................................................................................................................................................................................................1911.00100000000001000000
.......TTTGAGAATTGTCGCGGAGGATG.........................................................................................................................................................................................................................................................2311.00100000000000001000
..TCTACTTTGAGAATTGTCGCGGAGGATGTGA......................................................................................................................................................................................................................................................3111.00100000010000000000
...CTACTTTGAGAATTGTCGCGGAG.............................................................................................................................................................................................................................................................2311.00101000000000000000
..................TCGCGGAGGATGTGAGGAAGACATT............................................................................................................................................................................................................................................2511.00100000010000000000
.....................................GACATTGCCGAGGGTAAACT-A............................................................................................................................................................................................................................2111.00100001000000000000
.........TGAGAATTGTCGCGGAGGATGTGAG.....................................................................................................................................................................................................................................................2511.00100000010000000000
..............................................................TAA--CAAAACACC-------ATTGA--------------------------------------------------GTCGTATTTA...................................................................................................................................2711.00100000000100000000
TTTCTACTTTGAGAATTGTCGCG................................................................................................................................................................................................................................................................2311.00100000010000000000
......CTTTGAGAATTGTCGCGGAGGA...........................................................................................................................................................................................................................................................2211.00100000010000000000
........TTGAGAATTGTCGCGGAGGATGTGAGG....................................................................................................................................................................................................................................................2711.00100000000100000000
...............................................................................................................................................................................................................................................................ATGGACTTTGGTGGCTCCAA....2011.00110000000000000000
........TTGAGAATTGTCGCGGAGGAT..........................................................................................................................................................................................................................................................2111.00100000000000001000
......CTTTGAGAATTGTCGCGGAGGATGT........................................................................................................................................................................................................................................................2511.00100000000000010000
..........................................................................................................................................................................................................................................GACTGCTACTTCAAAGG............................1711.00100000001000000000
..................TCGCGGAGGATGTGAGGAAGACAT.............................................................................................................................................................................................................................................2411.00100000000000001000
....................................................................................................................................................................................................................................GACATAGACTGCTACTTCAAAGGC...........................2411.00100000010000000000
...................................................................................................................................................................................................................................AGACATAGACTGCTACTTCAAAGGCCAAA.......................2911.00100000010000000000
...........................................................................................................................................................................................................................TGTTCAACAGACATAGACTGC.......................................2111.00101000000000000000
.TTCTACTTTGAGAATTGTCGCGGA..............................................................................................................................................................................................................................................................2411.00100000010000000000
....................................................................................TTGA--------------------------------------------------GTCGTATTTATATTAAAGGT-A.......................................................................................................................2511.00100000010000000000
.TTCTACTTTGAGAATTGTCGCGG...............................................................................................................................................................................................................................................................2311.00100000000000010000
...........................................................................................................................................................................................................................TGTTCAACAGACATAGACTGCTACTTCAAAA.............................3111.00100000010000000000
.......TTTGAGAATTGTCGCGGAGGAT..........................................................................................................................................................................................................................................................2211.00100000010000000000
.TTCTACTTTGAGAATTGTCGC.................................................................................................................................................................................................................................................................2111.00101000000000000000
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAGG............................1911.00100000010000000000
........................................................T-ATTATAA--CAAAACACC-------ATTGA--------------------------------------------------GTCGTA.......................................................................................................................................2811.00100000010000000000
..............ATTGTCGCGGAGGATGTGA......................................................................................................................................................................................................................................................1911.00100000000001000000
..................................................................................................................................................................................................................................................CTTCAAAGGCCAAATGGACTT................2111.00110000000000000000
................TGTCGCGGAGGATGTGAGGAAGACAA.............................................................................................................................................................................................................................................2611.00100000000000010000
............................................................................................................................................................................................................................................................CAAATGGACTTTGGTGGCTCCAAGGA.2611.00100000010000000000
.......TTTGAGAATTGTCGCGGAGGATGT........................................................................................................................................................................................................................................................2411.00100000000100000000
..TCTACTTTGAGAATTGTCGCGGAGG............................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................................................................................................................................................................................TTCAAAGGCCAAATGGACTTTGGTGGC.........2711.00100000010000000000
..........................................................................................................................................GTCGTATTTATATTAAAGGT-A.......................................................................................................................2111.00100000010000000000
.......................................................................................................................................................................................................................................ATAGACTGCTACTTCAAAGGCC..........................2211.00100100000000000000
.......TTTGAGAATTGTCGCGGAGGATGTA.......................................................................................................................................................................................................................................................2511.00100000000000010000
.............................................................................................................................................................................................................................TTCAACAGACATAGACTGCTACTTCAA...............................2711.00100000010000000000
........TTGAGAATTGTCGCGGAGGATG.........................................................................................................................................................................................................................................................2211.00110000000000000000
...............TTGTCGCGGAGGATGTGAGGAAGACATT............................................................................................................................................................................................................................................2811.00100000010000000000
...........................................................................................................................................................................................................................TGTTCAACAGACATAGACTGCTACTT..................................2611.00100000000100000000
.......TTTGAGAATTGTCGCGGAG.............................................................................................................................................................................................................................................................1911.00101000000000000000
....TACTTTGAGAATTGTCGCGGAGGATGTG.......................................................................................................................................................................................................................................................2811.00100000010000000000
........TTGAGAATTGTCGCGGAGGATGTGA......................................................................................................................................................................................................................................................2511.00100000010000000000
....TACTTTGAGAATTGTCGCGGAGGATGT........................................................................................................................................................................................................................................................2711.00100000010000000000
....................................................................................TTGA--------------------------------------------------GTCGTATTTATATTAAAGGT-AA------T...............................................................................................................2711.00100000000010000000
.......................................................................................................................................................................................................................................ATAGACTGCTACTTCAAAGGCCAAATGGAC..................3011.00100000010000000000
......CTTTGAGAATTGTCGCGGAGGATGTGA......................................................................................................................................................................................................................................................2711.00100000010000000000
....TACTTTGAGAATTGTCGCGGAGGATGTGC......................................................................................................................................................................................................................................................2911.00100000010000000000
.TTCTACTTTGAGAATTGTCGCGGAGG............................................................................................................................................................................................................................................................2611.00100000010000000000
droSec2
TTTCTACTTTGAGAATTGTCGCGGACGATGTGAGGAAGACATTGCCGAGGGTAAAAT-ATAAC-----AAAACACC-------ATGTT--------------------------------------------------GTCGTGTTTATATTAAAGGC-AC------TTCT---------------------------------------------TTTTGTTCAACAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........TGAGAATTGTCGCGGACGAT..........................................................................................................................................................................................................................................................2011.0010010
........TTGAGAATTGTCGCGGACGATT.........................................................................................................................................................................................................................................................2211.0010100
..........GAGAATTGTCGCGGACGA...........................................................................................................................................................................................................................................................1811.0010001
...CTACTTTGAGAATTGTCGCGG...............................................................................................................................................................................................................................................................2111.0010100
...................CGCGGACGATGTGAGGAAGACATTGC..........................................................................................................................................................................................................................................2611.0010010
..............ATTGTCGCGGACGATGTGAGGAAGA................................................................................................................................................................................................................................................2511.0010010
............GAATTGTCGCGGACGATGTGAGGAAG.................................................................................................................................................................................................................................................2611.0011000
dm3
CTTCTACTTTGAGAATTGTCGCGGACGATGTGAGGAAGACATTGCCGAGGGTAAAAT-ATTATAA--CAAACTACC-------TTTAA--------------------------------------------------GTCGTATATATATTAAATTT-AC------TCCTT--------------------------------------------TTTTTTTCATCAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGACTCCAAGGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................T--------------------------------------------TTTTTTTCATCAGACATAG............................................20112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CAAACTACC-------TTTAA--------------------------------------------------GTCGTA.......................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GGCCAAATGGACTTTGGTGACTCCAA....2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TCAAAGGCCAAATGGACTTTGGTGAC.........2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
..............ATTGTCGCGGACGATGTGAGG....................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCGCGGACGATGTGAGGAAGACATTGC..........................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000001000000010000000000000000
.........TGAGAATTGTCGCGGACGATG.........................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACGATGTGAGGAAGACATTGCCGA.......................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.TTCTACTTTGAGAATTGTCGC.................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CAAATGGACTTTGGTGACTCCAAGG..2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACTTTGAGAATTGTCGCGGAC.............................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCGGACGATGTGAGGAAGACATT............................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCGGACGATGTGAGGAAGACATTGCC.........................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AATGGACTTTGGTGACTCCAA....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...............................................................AA--CAAACTACC-------TTTAA--------------------------------------------------GTCGT........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
........TTGAGAATTGTCGCGGACGATGTGAG.....................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........TGAGAATTGTCGCGGACGATGATC......................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTTTGAGAATTGTCGCGGACG............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTGTCGCGGACGATGTGAGG....................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGGACGATGTGAGGAAGACATT............................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................CGGACGATGTGAGGAAGAC...............................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TACTTTGAGAATTGTCGCGGACGATG.........................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGTCGCGGACGATGTGAGGAAGAC...............................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TACTTTGAGAATTGTCGCGGA..............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........GAGAATTGTCGCGGACGATGT........................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCGGACGATGTGAGGAAGACATTGC..........................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................GTGAGGAAGACATTGCCGAGGAC...................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............TTGTCGCGGACGATGTGAGGAAGA................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGAGAATTGTCGCGGACGATGTGAGG....................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............GAATTGTCGCGGACGATGTGAGGAA..................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGAGGAAGACATTGCCGAGGAC...................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGACGATGTGAGGAAGAC...............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................ACTTCAAAGGCCAAATGGACT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTACTTTGAGAATTGTCGC.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................ATGGACTTTGGTGACTCC......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACGATGTGAGGAAGACA..............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CTTCAAAGGCCAAATGGA...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......CTTTGAGAATTGTCGCGGACGATGT........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................AAATGGACTTTGGTGACTCCAAG...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTGAGAATTGTCGCGGACGAT..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............ATTGTCGCGGACGATGTGAGGAAGACA..............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGTCGCGGACGATGTGAGGAAGA................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCGGACGATGTGAGGAAGACATTGCC.........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCTACTTTGAGAATTGTCGCGGACGATG.........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGATGTGAGGAAGACATTGCCG........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCGGACGATGTGAGGAAGACATC............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TACTTTGAGAATTGTCGCGGACGA...........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATTGTCGCGGACGATGTGAGGA...................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AAGGCCAAATGGACTTTGGTA...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACGATGTGAGGAAGACATTGCCGAGG.....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGTCGCGGACGATGTGAGGAAGAC...............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......TTTGAGAATTGTCGCGGACGATGTG.......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................GAGGAAGACATTGCCGAGGA....................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GATGTGAGGAAGACATTGCCGAGG.....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................CCAAATGGACTTTGGTGACTCCAAG...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GATGTGAGGAAGACATTGCC.........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GATGTGAGGAAGACATTGCCGAGGAC...................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
............GAATTGTCGCGGACGATGTGAG.....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATTGTCGCGGACGATGTGAA.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGACGATGTGAGGAAGACATT............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................CGCGGACGATGTGAGGAAGACATTGCCGA.......................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TACTTTGAGAATTGTCGCGGACGATGATC......................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAATTGTCGCGGACGATGTGAGG....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................TGTGAGGAAGACATTGCCG........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................ACTTCAAAGGCCAAATGGACTTTGG.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAGGCCAAATGGAC..................2911.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TACTTCAAAGGCCAAATGGAC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTGAGAATTGTCGCGGACGATGTGA......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGAGGAAGACATTGCCGAGGT....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GAGGAAGACATTGCCGAGGGT...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGTCGCGGACGATGTGAG.....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTGAGAATTGTCGCGGACGAT..........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................CTTCAAAGGCCAAATGGACTT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................GACTTTGGTGACTCCAAGGAG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGTGAGGAAGACATTGC..........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GGCCAAATGGACTTTGGTGACTCCAAGGA.2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGACGATGTGAGGAAGACAT.............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................TTTTCATCAGACATAGACTGC.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AGACTGCTACTTCAAAGGCC..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTGAGAATTGTCGCGGACGATGT........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGAGGAAGACATTGCCGAG......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....ACTTTGAGAATTGTCGCGGAT.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCGCGGACGATGTGAGGAAGA................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................CAAATGGACTTTGGTGACTCC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ACATAGACTGCTACTTCAAAGGC...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGTCGCGGACGATGTG.......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................TCGCGGACGATGTGAGGAAGACATT............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACGATGTGAGGAAGACATTGCC.........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTACTTTGAGAATTGTCGCGGACG............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........TTGAGAATTGTCGCGGACG............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............TTGTCGCGGACGATGTGAGGA...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGTCGCGGACGATGTGAGGAAG.................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CAAATGGACTTTGGTGACTCCAAG...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AAGGCCAAATGGACTTTGG.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CCAAATGGACTTTGGTGACTC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAATTGTCGCGGACGATGTGAGGA...................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........TTGAGAATTGTCGCGGACGA...........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTCGCGGACGATGTGAGGAAGACAT.............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATGGACTTTGGTGACTCCAAG...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATTGTCGCGGACGATGTGA......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TACTTCAAAGGCCAAATGGACTTTGGT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTGAGGAAGACATTGCCGAGG.....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATTGTCGCGGACGATGTGAGGAAGA................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGGACGATGTGAGGAAGACA..............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AAATGGACTTTGGTGACTA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGTGAGGAAGACATTGCCGA.......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACGATGTGAGGAAGACATTGCCGAGGAC...................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCGGACGATGTGAGGAAGACAT.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGAATTGTCGCGGACGATGTGAG.....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AATTGTCGCGGACGATGTGAGGAAG.................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................CGCGGACGATGTGAGGAAGATC..............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTCTACTTCGAGAACTGTCGCGGACGATGTGAGGAGGACATAGCCGAGGGTAAAAT-ATTAC----TAAATTACT-------ATTAA--------------------------------------------------GTCGTATTTATATTAAATGC-AT--------------------------------------------------------GTGTTTTATCAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................CGCGGACGATGTGAGGAGGAC...............................................................................................................................................................................................................................................2111.0011000000
..........GAGAACTGTCGCGGACGAT..........................................................................................................................................................................................................................................................1911.0010000100
..TCTACTTCGAGAACTGTCGC.................................................................................................................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................................................................CTTCAAAGGCCAAATGGACT.................2011.0010000010
.................GTCGCGGACGATGTGAGGAG..................................................................................................................................................................................................................................................2011.0010000100
..........................GATGTGAGGAGGACATAGCCGA.......................................................................................................................................................................................................................................2211.0010000100
.................................................................................................................................................................................................................................................ACTTCAAAGGCCAAATGGACTTT...............2311.0011000000
droYak3
TTTCTACTTCGAGAACTGTCGTGGACGATGTGAGGAGGACATTGCCGAGGGTAAAAT-ATTGC----CAAAACACT-------TTTAA--------------------------------------------------GTCGTATTTATATA-TATT-----------------------------------------------------TAATATTTTTTTTTATCAGACATAGACTGCTACTTCAAAGGCCAAATGGACTTTGGTGGCTCCAAGGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............GAACTGTCGTGGACGATGT........................................................................................................................................................................................................................................................1912.00201000010000
..TCTACTTCGAGAACTGTCGT.................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................CATAGACTGCTACTTCAAAGGC...........................2211.00101000000000
......................GGACGATGTGAGGAGGAC...............................................................................................................................................................................................................................................1811.00100000010000
.......................GACGATGTGAGGAGGACAT.............................................................................................................................................................................................................................................1911.00100000010000
......................GGACGATGTGAGGAGGAA...............................................................................................................................................................................................................................................1811.00101000000000
................................AGGAGGACATTGCCGAGGA....................................................................................................................................................................................................................................1930.33110000000000
droEug1
TTTTTACTTCGAGAATTGTCGCGGGCGCTGTGAGGAAGATATAGCTGAGGGTAAGAT-CGCATACAG--ATAT-CC-T------------------------------------AGATAAAT-------------------------------------------------------TATAATTTTTAAT--------------------TAATA--ACTTTTTATCAGACATAGACTGTTACTTCAAAGGCCAAATGGACTTTGCTGGCTCTAAGGAGSizeHit CountTotal NormTotal
No Reads
droBia1
TTTCTACTTTGAGAATTGTCGCGGACGATGTGAGGAAGACATTGCCGAGGGTAAGAT-TACAA--------------------------------------------------------------TGAATG---------------TA--TAGAATGAC-------------T--GTTTTTACTTATAAC------------------TACAAT--AATTTATTAACAGACCTAGACTGCTATTTCAAAGATCAAATGGACTTTGCAGGCTCCAAAGAGSizeHit CountTotal NormTotal
No Reads
droTak1
TTTCTACTTCGAGAATTGTCGCGGACGATGTGAAGAAGACATTGCCGAGGGTAAGAA-GATCT-----A--------GATCTT-------------------------------------------------------GAC-------------------------------TTTGATTTAACTTATAAT------------------AAAAATATCTTTCTTATACAGACATAGACTGCTATTTCAAAGGCCAAATGGACTTTGCTGGCTCCAAGGAGSizeHit CountTotal NormTotal
No Reads
droEle1
TTTCTACTTCGAGAACTGTCGCGGTGGCTGTGAGGAAGACCTAGCTGAGGGTAAGAT-CACAC----------------------TCA--------------------------------------------------GTCGGCTTTAAATAATAGGT-----------------GTTGTTACTTATAA------------------------T-ATCACATTTTACAGACATAGACTGCTATTTCAAGGGCCAAATGGACTTTGCCGGCTCCAAGGAGSizeHit CountTotal NormTotal
No Reads
droRho1
TTTCTACTTCGAGAATTGTCGCGGGCGTTGTGAGGAAGACATTGCTGAGGGTAAGAT-AACAC--------------------------------------------------------------TGAACGTCTAGAAGTCA---------------------------------GTTTAAATGTATAATCACACACA--------------TT-AACTTATTTTACAGACATAGACTGCTATTTTAAAGGCCAAATGGACTTTGCCGGCTCCAAGGAGSizeHit CountTotal NormTotal
No Reads
droFic1
TTTCTACTTCGAAAATTGCCGCGGGCGCTGTGAAGAGGACATAGCCGAGGGTAATAT-AGCA-------ATATACC-------TTTCT--------------------------------------------------AC-------------------------------------TTTGATTTTTAAT------------------ACAAGCACTCTTAATCAACAGACATAGACTGCTATTTCAAGGGCCAAATGGACTTTGCAGGCTCCAAGGAGSizeHit CountTotal NormTotal
No Reads
droKik1
TTTCTACTTTGAGAATTGCCGCGGGCGCTGTGAAGAGGACATTGCAGAGGGTAAGAT-TTTCC-----A--------ATTCCCATAGG--------------------------------------------------GAC-------------------------------TCTTGGCTAAC---------------------------TAATGCCCCGCCTTTCCAGACATAGACTGCTATTTCAAAGGACAAATGGACTTTGCCGGCTCCAAGGAGSizeHit CountTotal NormTotal
No Reads
droAna3
CTTTTACTTTGAGAACTGTCGGGGACGGTGCGAAGAGGACATTGTCGAAGGTAATAA-TTCA---------------AT----AT--------------------TCAAAAAAA-----------------------------------------------------------------------------AGAAAAACT----------AAATATTTTTTATTTGCAGACATAGACTGCTACTTTAAAGGCCACATGGACTTTGCCGGCTCCAAGGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............ACTGTCGGGGACGGTGCGAAGAGGA................................................................................................................................................................................................................................................2512.002000020
..........GAGAACTGTCGGGGACGGT..........................................................................................................................................................................................................................................................1911.001010000
.........................................................................................................................................................................................................................................AGACTGCTACTTTAAAGGC...........................1911.001010000
.....................GGGACGGTGCGAAGAGGACA..............................................................................................................................................................................................................................................2011.001000001
.............AACTGTCGGGGACGGTGCGAAGAGGACA..............................................................................................................................................................................................................................................2811.001000001
.TTTTACTTTGAGAACTGTCGG.................................................................................................................................................................................................................................................................2111.001010000
.........................CGGTGCGAAGAGGACATTGTCG........................................................................................................................................................................................................................................2211.001100000
..TTTACTTTGAGAACTGTCGGGGA..............................................................................................................................................................................................................................................................2311.001010000
droBip1
CTTTTACTTTGAAAACTGTCGAGGACGGTGCGAAGAGGATATCGTCGAAGGTTTATT-AATTT----------ATTA------TTTTTA---------------TTACATAACA-----------------------------------------------------------------------------AACCGAATCAAGT---------AATTTTTTATCCGCAGATATAGACTGCTACTTTAAAGGCCAAATGGACTTTGCTGGATCCAAGGAGSizeHit CountTotal NormTotal
No Reads
dp5
CTTTTACTTTGAGAATTGTCGCGGACGCTGTGAGGAGGATATAGCCGAGGGTAAGAT-CTGATCCA-----------T------------------------------------AGCTGATCCATTGAATC-----------------TCTTCAATGC-ATCTCTCT-------------------------CC--CT---------------CTCTCTCTCTCTGTAGACATAGACTGCTATTTCAAAAGTCAAATGGAGCTGGCTGGCTCTAATGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............TTGTCGCGGACGCTGTGAGGA...................................................................................................................................................................................................................................................2111.0010100000000
............GAATTGTCGCGGACGCTGTGAGGA...................................................................................................................................................................................................................................................2411.0010100000000
...................................................................................................................................................................................................................................................TTCAAAAGTCAAATGGAGCTGGCTGGCT........2811.0010100000000
.........................................................................................................................................................................................................................................................AGTCAAATGGAGCTGGCTGGCT........2211.0010010000000
.....................................................................................................................................................................................................................................................CAAAAGTCAAATGGAGCTGGCTGGCT........2611.0010100000000
............................TGTGAGGAGGATATAGCCGAGGAC...................................................................................................................................................................................................................................2411.0010100000000
.................GTCGCGGACGCTGTGAGGAGGA................................................................................................................................................................................................................................................2211.0010100000000
.................GTCGCGGACGCTGTGAGGAG..................................................................................................................................................................................................................................................2011.0010100000000
................TGTCGCGGACGCTGTGAG.....................................................................................................................................................................................................................................................1811.0010100000000
......................GGACGCTGTGAGGAGGATATAGCC.........................................................................................................................................................................................................................................2411.0010100000000
..............ATTGTCGCGGACGCTGTGAGGA...................................................................................................................................................................................................................................................2211.0010100000000
......CTTTGAGAATTGTCGCGGACGC...........................................................................................................................................................................................................................................................2211.0010010000000
..................................................................................................................................................................................................................................................TTTCAAAAGTCAAATGGAGCTGGC.............2411.0010100000000
..........................................................................................................................................................................................................................................................GTCAAATGGAGCTGGCTGGCT........2111.0010100000000
.....................................................................................................................................................................................................................................................CAAAAGTCAAATGGAGCTGGCTGGC.........2511.0010000001000
.....ACTTTGAGAATTGTCGCGG...............................................................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................AAATGGAGCTGGCTGGCT........1820.5010100000000
............................................................................................................................................................................................................................................................CAAATGGAGCTGGCTGGCT........1920.5010100000000
droPer2
CTTTTACTTTGAGAATTGTCGCGGACGCTGTGAGGAGGATATAGCCGAGGGTAAGAT-CTGATCCA-----------T------------------------------------AGCTGAACCATTGAA----------TCGC-------TTCAATGC-ATCTCTCT-------------------------CCCTCT---------------CTCTCTCTCTCTGTAGACATAGACTGCTATTTCAAAAGTCAAATGGAGCTGGCTGGCTCTAATGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......CTTTGAGAATTGTCGCGGACG............................................................................................................................................................................................................................................................2112.002200000
........TTGAGAATTGTCGCGGACGCT..........................................................................................................................................................................................................................................................2112.002200000
........................................................................................................................................................................................................................................................AAGTCAAATGGAGCTGGCTGG..........2111.001010000
..........GAGAATTGTCGCGGACGCT..........................................................................................................................................................................................................................................................1911.001000001
.....................CGGACGCTGTGAGGAGGATAT.............................................................................................................................................................................................................................................2111.001000001
............GAATTGTCGCGGACGCTG.........................................................................................................................................................................................................................................................1811.001100000
.................GTCGCGGACGCTGTGAGGAGGAT...............................................................................................................................................................................................................................................2311.001000001
......CTTTGAGAATTGTCGCGGACGCT..........................................................................................................................................................................................................................................................2311.001100000
.................................GGAGGATATAGCCGAGGAC...................................................................................................................................................................................................................................1920.501010000
droWil2
TTTTTATTTCGAAAATTGTCGCGGACGCTGTGAGGAGGACATAGCTGAGGGTAAGTT-ATAAG---------GATA-------TTTGTG---------------CTTCCTGAAAAGCCAAATGATTGAA-----------------------------------------------------------------------------------ACTTTTTCTGTTTGTAGACATAGACTGCTACTTCAAAAGCCAATTGGACTTTGCTGGTGCAAAGGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................AGCCAATTGGACTTTGCTGGT.........2111.00100010
......................GGACGCTGTGAGGAGGACATAG...........................................................................................................................................................................................................................................2211.00100100
....TATTTCGAAAATTGTCGCGGACGCTG.........................................................................................................................................................................................................................................................2611.00101000
.........................................................................................................................................................................................................................................................AGCCAATTGGACTTTGCTGG..........2011.00101000
........................................................................................................................................................................................................................................TAGACTGCTACTTCAAAAGCC..........................2111.00110000
.........................................................................................................................TGATTGAA-----------------------------------------------------------------------------------ACTTTTTCTGTTTGTAG..................................................2511.00100010
......................GGACGCTGTGAGGAGGACATAGC..........................................................................................................................................................................................................................................2311.00101000
................TGTCGCGGACGCTGTGAGGA...................................................................................................................................................................................................................................................2011.00100010
.........................................................................................................................................................................................................................................................AGCCAATTGGACTTTGCT............1811.00100010
droVir3
CTTCTATTTCGAGAACTGTCGCAGTCGCTGCGAGGAGGATATTGTTGAGGGTAAGTATCGGTATCA-----------AT----TT--------------------TGTATAATA-----------------------------------------------------------------------------AAATGAAATAAATATTT--CGCTGCGTTTCCTTTACAGACATAGACTGTTACTTAAAGAGCCAAATGGAG------------AAGGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....ATTTCGAGAACTGTCGCAGTC.............................................................................................................................................................................................................................................................2112.002200000000000000000000000000000000000000000000000000000000000000
......................AGTCGCTGCGAGGAGGAT...............................................................................................................................................................................................................................................1812.002001001000000000000000000000000000000000000000000000000000000000
......................AGTCGCTGCGAGGAGGATATTC...........................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CATAGACTGTTACTTAAAGAGCC..........................2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CATAGACTGTTACTTAAAGAGC...........................2211.001000100000000000000000000000000000000000000000000000000000000000
.......................GTCGCTGCGAGGAGGATATT............................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..................TCGCAGTCGCTGCGAGGAGGA................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AAGAGCCAAATGGAG------------AAGGA.2011.001000000000000000000000000000000000000000000000000000000000000010
...CTATTTCGAGAACTGTCGCAGT..............................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....ATTTCGAGAACTGTCGCAGT..............................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTTTCCTTTACAGACATAGAC..........................................2111.001000000000000000100000000000000000000000000000000000000000000000
.....ATTTCGAGAACTGTCGCAGTCGCT..........................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................CTGTTACTTAAAGAGCCAAAT......................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................GCGAGGAGGATATTGTTGAGGAC...................................................................................................................................................................................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTTTTACTTTGAAAACTGCCGCGGACGCTGCGAGGAAGACATTGTCGAGGGTAAATATTA-T-------ATTTATA-------TTTATGACAAGAAACTCAATAATACATAAAA-----------------------------------------------------------------------------ATATAATTAATAT---------ATACATATATTTGCAGACATAGACTGTTACTTCAAGAGCCAAATGGAG------------AAGGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................AGGAAGACATTGTCGAGG.....................................................................................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................................................................AAGAGCCAAATGGAG------------AAG...1811.001100000
...........................CTGCGAGGAAGACATTGTC.........................................................................................................................................................................................................................................1911.001000001
........................ACGCTGCGAGGAAGACATTGT..........................................................................................................................................................................................................................................2111.001100000
.....ACTTTGAAAACTGCCGCGGAC.............................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................TGTTACTTCAAGAGCCAAATGGAG------------AA....2611.001000001
.....................................................................................................................................................................................................................................ACATAGACTGTTACTTCAAGAGCC..........................2411.001100000
...TTACTTTGAAAACTGCCGCGGACGC...........................................................................................................................................................................................................................................................2511.001100000
.....ACTTTGAAAACTGCCGCGGACGC...........................................................................................................................................................................................................................................................2311.001000001
droGri2
TTTCTACTTTGAGAACTGTCGCGGTCGCTGCGAGGAGGACATTGTTGAGGGTAAGTGTTGCT-------ATGTAAA-------TTTGT--------------------------------------------------GTAATATTTAAATCAA-TT-----------------------------------------------------CGTTG-CTTTATTCTGCAGACATAGACTGCTATTTCAAGGGCAAAATGGAG------------AAGGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................GTCGCTGCGAGGAGGACATTGTT.........................................................................................................................................................................................................................................2311.00110
........................................................................................................................................................................................................................................TAGACTGCTATTTCAAGG.............................1811.00110

Generated: 05/18/2015 at 11:57 PM