dsi_10047

Name	Class	Family	Strand
Gypsy8-I_Dpse-int	LTR	Gypsy	-

############################################################################################################################################################################################ TCACAACAACAGCGTCAGCGGCGGAAACGGCAATAGCAACAGCATCAGCGGTAGCAGCAACAACAAGAGCCACAAGCGGCAGGCTAACGGCAATCTGAAGGCGCCAATCCAGACACTCACCAACATCCACCCCCATAGCCAAAAATCGCCTGGCAGCAAAGTCAAGCAGACCAGCAGCAGCATAAGCT ************************************************...((.((.......((((((...(((.....)))...)))..)))....))))..................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	M024 male body	M025 embryo	O001 Testis	O002 Head	SRR553485 Chicharo_3 day-old ovaries	SRR553486 Makindu_3 day-old ovaries
........................................................................................GGCAATCTGAAGGCG.....................................................................................	15	0	6	1.67	10	10	0	0	0	0	0	0
.....................................................................................AACGGCAATCTGAAGGCG.....................................................................................	18	0	1	1.00	1	0	1	0	0	0	0	0
.CACAACAACAGCGTCAGCGGCT.....................................................................................................................................................................	22	1	1	1.00	1	0	0	1	0	0	0	0
.....ACAACAGCGTCAGCGGCGGAAACG...............................................................................................................................................................	24	0	1	1.00	1	0	0	0	0	1	0	0
...............................................................................CAGGCTAACGGCAATCTGAAGGCGCC...................................................................................	26	0	1	1.00	1	0	1	0	0	0	0	0
.......................................................................ACAAGCGGCAGGCTA......................................................................................................	15	0	1	1.00	1	1	0	0	0	0	0	0
...................................................................................CTAACGGCAATCTGAAGGCGC....................................................................................	21	0	1	1.00	1	0	0	1	0	0	0	0
...............................................................................CAGGCTAACGGCAATCTGGAGGCGCC...................................................................................	26	1	1	1.00	1	0	1	0	0	0	0	0
........ACAGCGTCAGCGGCGGAAACGGCA............................................................................................................................................................	24	0	1	1.00	1	0	0	0	0	0	1	0
....................................................................................TAACGGCAATCTGAAGGC......................................................................................	18	0	1	1.00	1	0	0	1	0	0	0	0
.................................................GGTAGCAGCAACAACAAG.........................................................................................................................	18	0	2	1.00	2	0	0	0	2	0	0	0
............................GGCAATAGCAACAGCATCAGCGGT........................................................................................................................................	24	0	1	1.00	1	0	0	0	0	0	0	1
............................................TCAGCGGTGGCAGCAA................................................................................................................................	16	1	18	0.39	7	7	0	0	0	0	0	0
............................................TCAGCGGTGGCAGCAAC...............................................................................................................................	17	1	12	0.33	4	4	0	0	0	0	0	0
.......................................CAGCATCAGCGCTAGCAGC..................................................................................................................................	19	1	4	0.25	1	1	0	0	0	0	0	0
.....................................................................................ATCGGCAATCTGAAGGC......................................................................................	17	1	5	0.20	1	1	0	0	0	0	0	0
.....................................................................................AAGGGCAATCTGAAGG.......................................................................................	16	1	6	0.17	1	1	0	0	0	0	0	0
........................................................................................GGCAATCTGAAGGCGCA...................................................................................	17	1	7	0.14	1	1	0	0	0	0	0	0
.......................................................................................GGGCAATCTGAAGGCGC....................................................................................	17	1	7	0.14	1	1	0	0	0	0	0	0
.......................................................................ACAAGCGGCAAGCTA......................................................................................................	15	1	8	0.13	1	1	0	0	0	0	0	0
........................................................................................GGCAATCTGCAGGCGC....................................................................................	16	1	9	0.11	1	1	0	0	0	0	0	0
.......................................................................................GGGCAATCTGAAGGCGAC...................................................................................	18	2	10	0.10	1	1	0	0	0	0	0	0
.........................................................................................GCAAGCTGAAGGCGC....................................................................................	15	1	20	0.05	1	1	0	0	0	0	0	0
............................................TCAGCGGTGGCAGCAAAAA.............................................................................................................................	19	2	20	0.05	1	1	0	0	0	0	0	0

AGTGTTGTTGTCGCAGTCGCCGCCTTTGCCGTTATCGTTGTCGTAGTCGCCATCGTCGTTGTTGTTCTCGGTGTTCGCCGTCCGATTGCCGTTAGACTTCCGCGGTTAGGTCTGTGAGTGGTTGTAGGTGGGGGTATCGGTTTTTAGCGGACCGTCGTTTCAGTTCGTCTGGTCGTCGTCGTATTCGA ************************************************...((.((.......((((((...(((.....)))...)))..)))....))))..................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	O001 Testis
......................................TGTCGTAGTCGCCATCGTCGT.................................................................................................................................	21	0	1	1.00	1	0	1
............................................AGTCGCCACCGTCGT.................................................................................................................................	15	1	20	0.70	14	14	0
...................................................................................................CCGCGGTGAGGTCTGTGGGTA....................................................................	21	3	2	0.50	1	1	0
...........................................................................................................AGGTCTGTGGGTAGTTGT...............................................................	18	2	8	0.13	1	1	0
..................................................................................................................................................GCGAACCGTCGTTTC...........................	15	1	15	0.07	1	1	0
............................................AGTCGCCACCGTCGTTGGTTT...........................................................................................................................	21	3	16	0.06	1	1	0
.........................................................................................................TTAGGTCTGTGGGTAGT..................................................................	17	2	20	0.05	1	1	0

Species	Coordinate	ID	Alignment
droSim2	x:10114670-10114857 -	dsi_10047	TCA-CAACAACAGCGTCAGCGGCGG------------------AAACGGCAATAGCAACAGCATCAG------CGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGC---TAACGGCAATC------------------TG-------AAGGCGCCAATCCA-------------------------G------ACACTCAC---CAACAT-------------------------------------CCACCCCCATAGCCAA-AAAT---------------------------CGCCTGG-----------------------------------------------------CAGCAAAGTCAAGCAGACCA------GC------------AGCAGCATAAGCT
droSec2	scaffold_15:1354541-1354731 -		TCA-CAACAACAGCGTCAGCGGCGG------------------AAACGGCAATAGCAACAGCATCAG------CGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGCGGCCAACGGCAATC------------------TG-------AAGGCGCCACTCCA-------------------------G------ACACTCAC---CAACAT-------------------------------------CCACCCCCACAGCCAA-AAAT---------------------------CGCCCGG-----------------------------------------------------CAGCAAAGTCAAGCAGACCA------GC------------AGCAGCATAAGCG
dm3	chrX:10656147-10656379 -		TCA-CAACAACATCGGCGGCGGCGG---CGG------------AAACGGCAATAGCAACAGCATCAG------CGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGCGGCCAATGGCAGTC------------------TA-------AAGTCGCCACTCCT-------------------------G------ACAATCAC---CAACAT-------------------------------------CAACTCCCACAGCCAA-A---------------AAGGCGCTTTGAAATCGCCCGTCAGCAAAGTCAAGCAGAGCAGCAA---------------C-----------AGCAGCAGTAGCAACAGTAACA------GC------------AAAACCCTCAGCG
droEre2	scaffold_4690:4474173-4474426 +		CCA-CAGCGGCAGCGGCGGAAACAG------------------CAACAGCAATAGCAACATCACCAGCACCAGCGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGCGGCCAACGGCAGCC------------------TG-------AAGGCGCCACACCA-------------------------G------TCAAACACCACCACCAC-------------------------------------CCACTCCCACAGCCAA-A---------------AAACCCCCTCGAAATCGCCCGGCAGCAAAGTCAAGCAGAGCAGCAGCAGCAGCAGCAGCGGCAAC-----------AACAGTAGCAGCGGCAGCA------GC------------AGAAGCCTCAGCG
droYak3	2R:17621845-17622017 +		CAT-CAACAACAGCATCAGTATCAG------------------CATCAGCAGCAGCATCAGCAGCAG------CAGCAAC--AGCAGCATCAGCAG---CAGCA----------TC---AGCAGAC--------------ACAACAGCAGCA------TC------A-ACA--------------T---------------CAACAGGCACCG-----------------------------CAGCAAC--ATCAGCAG------------------------------------------------------------------------------------------------------C-----------A------GGCCCCGCAGCAACA------GCAGTACCAGAAACCGCCGCATAAGCA
droEug1	scf7180000409577:5819-6000 +		CAA-CTACAACGACTACAGCAGTAA---CGT-------------GTGAGCGGCAGCAACAGCATCAG------CAGAAGC--AGCAACAACATCAG---CA-GAAGCAGCAACAAC---ATCAGC--------------------AGAAGCA------GC--------------AACGCCA----------GAGACTA---CAACAACTACTG-----------------------------CAGCAACTTATCGGCGA------------------------------------------------------------------------------------------------------C-----------AGCAACGACAACTACAGCCAC-------AC------------GGCAGCGTAAGCA
droBia1	scf7180000302428:9670521-9670711 -		CCAGCAGCAGCAGCAACAGCAGCAG------------------CAACAGCAGCAGCAACATCAGCAG------CAGCAAC--AGCAACAACAACAG---CAGCA----------GC---AGCACTG---------------------GGACT--------------------ACTATGCCAGGCAG---CAGCAGCAACATCAGCAGCAGCAG-----------------CAGCAACAGCAACAGC----------------------------------CAG-CGGC---------------------------CGCC-AC-----------------------------------------------------CAGCAGTACCAACGGCAACA------GC------------AGCAGCAGTAGCA
droTak1	scf7180000415401:393902-394094 +		CAA-CAGCGGCGGCGGCGGCGGCAG------------------CTGCA---ACAGCGACCGCAGCAGCAGTAGTTGCACT--GCCGACGGCAGGAG---CAACA-------------GCCGCTGCA---CCAC------------AGCAACA------TG-------CAGGCTAC-----GGA------CAGCAGCAACAA--------------------------------CAG--------------------------------------------------------------------------------------------------------CAGCAGCAGCAACATCACCAGCAACAGCAGCAG--CATCTCGCCCAGCAGAGCCA------TC------------AGCAACATCAGCA
droEle1	scf7180000491268:252869-253047 +		TCG-GCTCAGCAGCAACAGCAGCAGAATATGCATCACCATCAGCAACAGCAGCAGCAGCAACACCAA------CAACAGC--AGCAGCAGCA----------------------TA---TGCAGC--------------------AGCAACA------TC------A------------------GCAGCAGCAGCAA--------------------------------CATCAACAGCAGCAGCAAC--ATCAGCAA------------------------------------------------------------------------------------------------------C-----------AGCAGCAACAACATCAGCAGCA------GC------------AACAGCATCAGCA
droRho1	scf7180000779334:988826-989015 -		CAG-CAACAGCAGCAGCAGCAACAG------------------CAGCAGCAGCAGCAACAGCAGCAG------CAACAGCAGCACAACAGCAGCAG---CCACA----------GC---AGCAGC--------------------AGCAACT------GC------A------------------ACTGCAGCAGCAA-----------------------------CAG---CAACTGCAACAGCAAC--AGCAACTG------------------------------------------------------------------------------------------------------C-----------AGCAGCAACAGCAACTGCAGCAGCAACAGCAACACCAGGAGCTCTACCGCCAGCA
droFic1	scf7180000453882:504898-505082 -		ACA-CAGCAGCGGCAACACCAATAG------------------CAACAGCAACAGCACCGGCACCGG------CAG-----------CGGCAAGAGTCACCACAAG------------CGGCAGGCGGCCAACGGCAGTG------------------TA-------AAGGC-----------------------------CAACAG------TCA--CTCCTCCCACTC-------------------------------------CCACTCCCACAGCCAA-ACGC------------------CGTCGAAGTCG-----------------------------------------------------------ACCAGCAGCAGCAGCAGCC------TC------------AGCCTCAGCGGGA
droKik1	scf7180000301810:202568-202755 -		CAA-CAGCAGCAGCAAACGCAGCAG------------------AAACCTCAACAACAGCAGCAGCAG------CTGCAAC--AGCAACAGCAGAAA---CCTCA-------------GCTGCAGAA--------------GC---CGCAGCA------GG-------AGAACTCT--------CAG---CAGCAGAACCCT-------------------------------------------------------CAG---------------------------------------------------------------------------------CAGCAACACCAAAAACAGCAGCTAAATCGAAGG--CAGAAGGTAAAGCAGAAGCA------AC------------AGCAACAGAACCC
droAna3	scaffold_13266:4353837-4354039 +		CAG-CAGCACCAGCAACAGCAGCAA------------------CAACAACAGCAGCAACAGCAACAG------CAGCAGC--AACAACAACAACAG---CAGCA----------GCAGCAGAAGCT--------------GAAACAGTCGCA------GG--------------------------------CGGCAA--------------------------------------GTGCGGCAGC----------CAACAACAAGGCCACCAACCTGACCAAGGACTCGCCCAAGCAGAAGAACAGCTC----------GG-------------CCG--------------------------------------------AGGAGGAACAGCA------GC------------AACAGCAGCAGCT
droBip1	scf7180000395567:7215-7408 -		CAA-CAACAGCAGCAACATCAGCTG------------------CAACAGCACCAGCAACAGTTACAA------CACCAGC--AGCAGCAGCAACAG---CAACA----------GCACCTGCACCA--------------GCAACAGCTTCA------GC------C-GCA--------------C---CAGCAGCAA--------------------------------------ATGCAACACCAC--------------------------------------------------------------------------------------------CAGCAGCAACAACAGCAGCAGCAACAGCACCAG--CAGCTGCTGCACGAGTCCCA------GC------------AGCAACAGCAGCA
dp5	XL_group1a:5439595-5439794 +		CAG-CAACAGCAGCAGCCGCAGCAA---CAG------------CAACAGCAGCAGCAGCAGCATCAGCCACAAAAGCAGC--AGCAGCAACAAAAG---CAGCAAA----------AGCAACAGC-----------------------AGCA------GCAACAGCA-GGT-----------GCAG---CAGCCACAA-----------------AATCAG---CAGCACCAGCAACAGCACCAGCAAC--AGCACC---------------------------------------------------------------AG---------------------------------------C-----------AACAGCACCAGCAACAGCACCA------GC------------AACAGCAGCAGCA
droPer2	scaffold_18:298088-298276 +		CAG-CAATAGCAACATCAGCAACGG------------------CAACGGCAACAGCAGTGGCGCCAA------GAACAAC--AACAACTACAAACA---GCACAAG------------AACATGGCCAGCAATGGCAATCAGAATGGTGGCG------GG---------------GATCA---------------------CGATTACGAGG--------------ACAT-------------------------------------CTATCTGGTGCGGGAA-GAGT---------------------------CGC----------------------------------------------------------GCAAGCAGCACCAGCACCA------GC------------AGCAGCACCAGAT
droWil2	scf2_1100000004776:18465-18652 -		CAA-CAGCAACAGCAACAACAGCAG------------------CAACAACAACAGCAGCAGCAACAA------CAGCAAC--AGCAACAACAACAG---CAGCA----------ACAACAGCAACA-----------------------GCAACAACAGC------A-GCA--------------G---CAGCAGCAACTGCAACAACAGCAG-----------------CAGCAACAGCAACAACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAACAGCAACAACAGCA------AC------------AACAGCAGCAACA
droVir3	scaffold_12963:647951-648147 +		CAG-CAGCAGCAGCAACAACAGCAG------------------CAACAGCAGCAGCAACAGCACCAA------CAACAGC--AGCAACAACAGCAG---CAACA----------GCAGCAGCAGC-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------CAGCAGCAGCAG--CAC---------------CAGCAACAG----------------------TCAACGCCACAGCAAA-ACGA------------------TGTCTACCTC---AGT-----------------------------------------------------CAGCAGCAACTTGCATACCA------GC------------AGCAGCAACAGCA
droMoj3	scaffold_6473:10518952-10519133 -		TAG-CAACAACAGCAGCAGCAGCAA------------------CAGCAGCAAC---AACAGTAGCAG------CAGCAGC--AACAGCAGCAATAG---CAACA----------GTAGCAGCAATC--------------GAAATAGTAATA------GG------A-GAA-----------ACAG---------------CAGCCACAGCCA-----------------CATCAACAAAGACAAGAAC--AGCAGCAA------------------------------------------------------------------------------------------------------C-----------AGCAATAGCAGCAGCAGCAACA------GC------------AGCAGCAGAAACA
droGri2	scaffold_15203:5083858-5084039 +		CAA-CATCAGCAGCAGCAGCAGCAA------------------CAGCA---ACAGCAACAGCAGCAG------CAGCAGC--AGCAGCAGCATGAG---CAACA----------ACAACGGCAACA--------------GCAACAGCAGCA------GCAACAACA------------------G---------------CAACAACAACAA-----------------CAACAAATGCATCACCATC--ACCATCAT------------------------------------------------------------------------------------------------------C-----------AGCAACAACAACAACAGCAACA------GC------------AGCAGCAGCAACA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

TCA-CAACAACAGCGTCAGCGGCGG------------------AAACGGCAATAGCAACAGCATCAG------CGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGC---TAACGGCAATC------------------TG-------AAGGCGCCAATCCA-------------------------G------ACACTCAC---CAACAT-------------------------------------CCACCCCCATAGCCAA-AAAT---------------------------CGCCTGG-----------------------------------------------------CAGCAAAGTCAAGCAGACCA------GC------------AGCAGCATAAGCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................................................................GGCAATC------------------TG-------AAGGCG...............................................................................................................................................................................................................................................................	15	6	1.67	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
..................................................................................................................................AACGGCAATC------------------TG-------AAGGCG...............................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.CA-CAACAACAGCGTCAGCGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......ACAACAGCGTCAGCGGCGG------------------AAACG............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................CAGGC---TAACGGCAATC------------------TG-------AAGGCGCC.............................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................ACAAG------------CGGCAGGC---TA.........................................................................................................................................................................................................................................................................................................	15	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................C---TAACGGCAATC------------------TG-------AAGGCGC..............................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........ACAGCGTCAGCGGCGG------------------AAACGGCA.........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TAACGGCAATC------------------TG-------AAGGC................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................GGTAGC--AGCAACAACAAG..............................................................................................................................................................................................................................................................................................................................................	18	2	1.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
...............................................GGCAATAGCAACAGCATCAG------CGGT...............................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................GGCAATC------------------TG-------AAGGCGCA.............................................................................................................................................................................................................................................................	17	7	0.14	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

TCA-CAACAACAGCGTCAGCGGCGG------------------AAACGGCAATAGCAACAGCATCAG------CGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGCGGCCAACGGCAATC------------------TG-------AAGGCGCCACTCCA-------------------------G------ACACTCAC---CAACAT-------------------------------------CCACCCCCACAGCCAA-AAAT---------------------------CGCCCGG-----------------------------------------------------CAGCAAAGTCAAGCAGACCA------GC------------AGCAGCATAAGCG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.......................GG------------------AAACGGCAATAGCAACA................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0
.....................................................AGCAACAGCATCAG------CGGT...............................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
....................................................................................CAACAACAAGAG---CCACAAG------------C.....................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TCAAGCAGACCA------GC------------AGCAGC.......	20	1	1.00	1	0	0	1	0
........AACAGCGTCAGCGGCGG------------------AAACGGCAA........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0
.........................................................ACAGCATCAG------CGGTAGC--AGC.......................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
.....................................................................................AACAACAAGAG---CCACAAG------------C.....................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
...................................................ATAGCAACAGCATCAG------CG.................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0

dm3

TCA-CAACAACATCGGCGGCGGCGG---CGG------------AAACGGCAATAGCAACAGCATCAG------CGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGCGGCCAATGGCAGTC------------------TA-------AAGTCGCCACTCCT-------------------------G------ACAATCAC---CAACAT-------------------------------------CAACTCCCACAGCCAA-A---------------AAGGCGCTTTGAAATCGCCCGTCAGCAAAGTCAAGCAGAGCAGCAA---------------C-----------AGCAGCAGTAGCAACAGTAACA------GC------------AAAACCCTCAGCG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......................................................................................................................................................................................................................................................................................GCCAA-A---------------AAGGCGCTTTGAAA..................................................................................................................	20	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................AGCAGTAGCAACAGTAACA------...........................	19	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................GCTTTGAAATCGCCCGTCAG.......................................................................................................	20	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................CAGCATCAG------CGGTAGC--AGCAAC....................................................................................................................................................................................................................................................................................................................................................	22	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................TCGCCCGTCAGCAAAGTCAAGCAGAGCAG.....................................................................................	29	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................ATCAG------CGGTAGC--AGCAACAACA................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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............................................................................................AGAG---CCACAAG------------CGGCAGGCGGCCA.........................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGTAGCAACAGTAACA------GC------------AAAACCC......	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.............................................................................AGC--AGCAACAACAAGAG---C........................................................................................................................................................................................................................................................................................................................................	18	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................................................................................................................................................................................................................................................................................................C-----------AGCAGCAGTAGCAACAGTAACA------GA------------TC...........	27	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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droEre2

CCA-CAGCGGCAGCGGCGGAAACAG------------------CAACAGCAATAGCAACATCACCAGCACCAGCGGTAGC--AGCAACAACAAGAG---CCACAAG------------CGGCAGGCGGCCAACGGCAGCC------------------TG-------AAGGCGCCACACCA-------------------------G------TCAAACACCACCACCAC-------------------------------------CCACTCCCACAGCCAA-A---------------AAACCCCCTCGAAATCGCCCGGCAGCAAAGTCAAGCAGAGCAGCAGCAGCAGCAGCAGCGGCAAC-----------AACAGTAGCAGCGGCAGCA------GC------------AGAAGCCTCAGCG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................................................................................................................................................................................................................................................................................................................................................................GCAAC-----------AACAGTAGCAGCGGCA....................................	21	1	2.00	2	0	0	0	0	2	0	0
..................................................................................AGCAACAACAAGAG---CCACAAG------------C.....................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
...........AGCGGCGGAAACAG------------------CAACAGCAATAGC....................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
...................................................ATAGCAACATCACCAGCACCAGCGGTAG.............................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................CACAAG------------CGGCAGGCGGCCAACG......................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................AC-----------AACAGTAGCAGCGGCAGCA------GC------------AGAA.........	27	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................................................................AACAGTAGCAGCGGCAGCA------GC------------AGA..........	24	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................CAACGGCAGCC------------------TG-------AAGGCGCCACACC........................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................AGCAGCGGCAAC-----------AACAGTAGCAGCGGCA....................................	28	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................CAAAGTCAAGCAGAGCAGCA...................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................TCAAGCAGAGCAGCAGCAGCAG............................................................................	22	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GTAGCAGCGGCAGCA------GC------------AGAAGCCTCAGC.	29	1	1.00	1	0	1	0	0	0	0	0
..........................................................................GGTAGC--AGCAACAACAAGAG---CCACAAG------------C.....................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................AACAGTAGCAGCGGCAGC..................................	18	2	0.50	1	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGCAGCA------GC------------AGAA.........	18	4	0.25	1	1	0	0	0	0	0	0
.............................................................................AGC--AGCAACAACAAGAG---C........................................................................................................................................................................................................................................................................................................................................	18	4	0.25	1	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................AGCAGAGCAGCAGCAGCA.............................................................................	18	6	0.17	1	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCGGCAAC-----------A...................................................	24	7	0.14	1	0	1	0	0	0	0	0
....................AACAG------------------CAACAGCAATAGCA...................................................................................................................................................................................................................................................................................................................................................................................	19	11	0.09	1	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCGGC..................................................................	21	20	0.05	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCG....................................................................	19	20	0.05	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCGGC..................................................................	23	20	0.05	1	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCGGC..................................................................	20	20	0.05	1	0	0	0	1	0	0	0

droYak3

CAT-CAACAACAGCATCAGTATCAG------------------CATCAGCAGCAGCATCAGCAGCAG------CAGCAAC--AGCAGCATCAGCAG---CAGCA----------TC---AGCAGAC--------------ACAACAGCAGCA------TC------A-ACA--------------T---------------CAACAGGCACCG-----------------------------CAGCAAC--ATCAGCAG------------------------------------------------------------------------------------------------------C-----------A------GGCCCCGCAGCAACA------GCAGTACCAGAAACCGCCGCATAAGCA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................AGCAGCAG------CAGCAAC--AGCAGCAT..................................................................................................................................................................................................................................................................................................................................................	23	10	0.10	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................CAAC--AGCAGCATCAGCAG---CAGCA----------..........................................................................................................................................................................................................................................................................................................................	23	12	0.08	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................TCAGCAGCAG------CAGCAAC--AGCA......................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................ATCAGCAGCAGCATCAGCA.............................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................ATCAGCAG---CAGCA----------TC---AGCA.................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................GCAAC--AGCAGCATCAGCA.............................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..................................................AGCAGCATCAGCAGCAG------CAGC...............................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0

droEug1

CAA-CTACAACGACTACAGCAGTAA---CGT-------------GTGAGCGGCAGCAACAGCATCAG------CAGAAGC--AGCAACAACATCAG---CA-GAAGCAGCAACAAC---ATCAGC--------------------AGAAGCA------GC--------------AACGCCA----------GAGACTA---CAACAACTACTG-----------------------------CAGCAACTTATCGGCGA------------------------------------------------------------------------------------------------------C-----------AGCAACGACAACTACAGCCAC-------AC------------GGCAGCGTAAGCA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CCAGCAGCAGCAGCAACAGCAGCAG------------------CAACAGCAGCAGCAACATCAGCAG------CAGCAAC--AGCAACAACAACAG---CAGCA----------GC---AGCACTG---------------------GGACT--------------------ACTATGCCAGGCAG---CAGCAGCAACATCAGCAGCAGCAG-----------------CAGCAACAGCAACAGC----------------------------------CAG-CGGC---------------------------CGCC-AC-----------------------------------------------------CAGCAGTACCAACGGCAACA------GC------------AGCAGCAGTAGCA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CAA-CAGCGGCGGCGGCGGCGGCAG------------------CTGCA---ACAGCGACCGCAGCAGCAGTAGTTGCACT--GCCGACGGCAGGAG---CAACA-------------GCCGCTGCA---CCAC------------AGCAACA------TG-------CAGGCTAC-----GGA------CAGCAGCAACAA--------------------------------CAG--------------------------------------------------------------------------------------------------------CAGCAGCAGCAACATCACCAGCAACAGCAGCAG--CATCTCGCCCAGCAGAGCCA------TC------------AGCAACATCAGCA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TCG-GCTCAGCAGCAACAGCAGCAGAATATGCATCACCATCAGCAACAGCAGCAGCAGCAACACCAA------CAACAGC--AGCAGCAGCA----------------------TA---TGCAGC--------------------AGCAACA------TC------A------------------GCAGCAGCAGCAA--------------------------------CATCAACAGCAGCAGCAAC--ATCAGCAA------------------------------------------------------------------------------------------------------C-----------AGCAGCAACAACATCAGCAGCA------GC------------AACAGCATCAGCA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAG-CAACAGCAGCAGCAGCAACAG------------------CAGCAGCAGCAGCAACAGCAGCAG------CAACAGCAGCACAACAGCAGCAG---CCACA----------GC---AGCAGC--------------------AGCAACT------GC------A------------------ACTGCAGCAGCAA-----------------------------CAG---CAACTGCAACAGCAAC--AGCAACTG------------------------------------------------------------------------------------------------------C-----------AGCAGCAACAGCAACTGCAGCAGCAACAGCAACACCAGGAGCTCTACCGCCAGCA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ACA-CAGCAGCGGCAACACCAATAG------------------CAACAGCAACAGCACCGGCACCGG------CAG-----------CGGCAAGAGTCACCACAAG------------CGGCAGGCGGCCAACGGCAGTG------------------TA-------AAGGC-----------------------------CAACAG------TCA--CTCCTCCCACTC-------------------------------------CCACTCCCACAGCCAA-ACGC------------------CGTCGAAGTCG-----------------------------------------------------------ACCAGCAGCAGCAGCAGCC------TC------------AGCCTCAGCGGGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAA-CAGCAGCAGCAAACGCAGCAG------------------AAACCTCAACAACAGCAGCAGCAG------CTGCAAC--AGCAACAGCAGAAA---CCTCA-------------GCTGCAGAA--------------GC---CGCAGCA------GG-------AGAACTCT--------CAG---CAGCAGAACCCT-------------------------------------------------------CAG---------------------------------------------------------------------------------CAGCAACACCAAAAACAGCAGCTAAATCGAAGG--CAGAAGGTAAAGCAGAAGCA------AC------------AGCAACAGAACCC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CAG-CAGCACCAGCAACAGCAGCAA------------------CAACAACAGCAGCAACAGCAACAG------CAGCAGC--AACAACAACAACAG---CAGCA----------GCAGCAGAAGCT--------------GAAACAGTCGCA------GG--------------------------------CGGCAA--------------------------------------GTGCGGCAGC----------CAACAACAAGGCCACCAACCTGACCAAGGACTCGCCCAAGCAGAAGAACAGCTC----------GG-------------CCG--------------------------------------------AGGAGGAACAGCA------GC------------AACAGCAGCAGCT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................................................................................................................................................................................................................................................................................................................................................CG--------------------------------------------AGGAGGAACAGCA------GC------------AACAGCAGC....	26	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................GCTC----------GG-------------CCG--------------------------------------------AGGAGGAACAG...................................	20	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................AGAAGAACAGCTC----------GG-------------CCG--------------------------------------------AGGA..........................................	22	1	1.00	1	0	1	0	0	0	0
.............................................................................AGC--AACAACAACAACAG---CAGCA----------GCAGC.....................................................................................................................................................................................................................................................................................................................	27	4	0.25	1	0	1	0	0	0	0
...............................................................ACAG------CAGCAGC--AACAACAACAACAG---C........................................................................................................................................................................................................................................................................................................................................	26	6	0.17	1	0	1	0	0	0	0
............................................................................CAGC--AACAACAACAACAG---CAGCA----------GCAG......................................................................................................................................................................................................................................................................................................................	27	6	0.17	1	1	0	0	0	0	0
..............................................................................GC--AACAACAACAACAG---CAGCA----------GCAGC.....................................................................................................................................................................................................................................................................................................................	26	7	0.14	1	0	1	0	0	0	0
..............................................................AACAG------CAGCAGC--AACAACAAC.................................................................................................................................................................................................................................................................................................................................................	21	20	0.10	2	0	2	0	0	0	0
.....................................................................................AACAACAACAG---CAGCA----------GCA.......................................................................................................................................................................................................................................................................................................................	19	20	0.10	2	0	2	0	0	0	0
...........................................................................GCAGC--AACAACAACAACAG---.........................................................................................................................................................................................................................................................................................................................................	19	20	0.10	2	0	0	0	0	0	2
...........................................................AGCAACAG------CAGCAGC--AACAACAACA................................................................................................................................................................................................................................................................................................................................................	25	14	0.07	1	0	1	0	0	0	0
..............................................CAACAGCAGCAACAGCAACAG------CAGCAGC--..........................................................................................................................................................................................................................................................................................................................................................	28	16	0.06	1	0	1	0	0	0	0
......................CAA------------------CAACAACAGCAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................	22	17	0.06	1	0	1	0	0	0	0
..........................................................................................CAACAG---CAGCA----------GCAGCAGAA.................................................................................................................................................................................................................................................................................................................	20	18	0.06	1	1	0	0	0	0	0
........................A------------------CAACAACAGCAGCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................	21	18	0.06	1	0	1	0	0	0	0
..................GCAGCAA------------------CAACAACAGCA......................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
....................................................................................CAACAACAACAG---CAGCA----------GCAGC.....................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	1
...................................................................................ACAACAACAACAG---CAGCA----------..........................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	1	0	0
...................................................................................ACAACAACAACAG---CAGCA----------GCAGC.....................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0
...............................................................ACAG------CAGCAGC--AACAACAAC.................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
...................................................................................ACAACAACAACAG---CAGCA----------GCAGCA....................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1
.....................................................AGCAACAGCAACAG------CAGC...............................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
................................................................CAG------CAGCAGC--AACAACAACAACA.............................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...................................................GCAGCAACAGCAACAG------CAGCAGC--A.........................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
............................................................................CAGC--AACAACAACAACAG---CAGC.....................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
.............................................................................AGC--AACAACAACAACAG---CAGC.....................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
...................................................GCAGCAACAGCAACAG------CAGCAGC--AAC.......................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0
........................................................AACAGCAACAG------CAGCAGC--AA........................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
......................................................................................ACAACAACAG---CAGCA----------GCAG......................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	1
.............................................................CAACAG------CAGCAGC--AACAACAACA................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0
..............................................................AACAG------CAGCAGC--AACAACA...................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0
.............................................................................AGC--AACAACAACAACAG---C........................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
......................CAA------------------CAACAACAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	1
...............................................................................C--AACAACAACAACAG---CAGCA----------GCA.......................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0
..............AACAGCAGCAA------------------CAACAACA.........................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0
.....................................................AGCAACAGCAACAG------CAGCAGC--..........................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0
..............................................................................GC--AACAACAACAACAG---CAGC.....................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0

droBip1

CAA-CAACAGCAGCAACATCAGCTG------------------CAACAGCACCAGCAACAGTTACAA------CACCAGC--AGCAGCAGCAACAG---CAACA----------GCACCTGCACCA--------------GCAACAGCTTCA------GC------C-GCA--------------C---CAGCAGCAA--------------------------------------ATGCAACACCAC--------------------------------------------------------------------------------------------CAGCAGCAACAACAGCAGCAGCAACAGCACCAG--CAGCTGCTGCACGAGTCCCA------GC------------AGCAACAGCAGCA	Size	Hit Count	Total Norm	Total
No Reads

dp5

CAG-CAACAGCAGCAGCCGCAGCAA---CAG------------CAACAGCAGCAGCAGCAGCATCAGCCACAAAAGCAGC--AGCAGCAACAAAAG---CAGCAAA----------AGCAACAGC-----------------------AGCA------GCAACAGCA-GGT-----------GCAG---CAGCCACAA-----------------AATCAG---CAGCACCAGCAACAGCACCAGCAAC--AGCACC---------------------------------------------------------------AG---------------------------------------C-----------AACAGCACCAGCAACAGCACCA------GC------------AACAGCAGCAGCA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................................................................................................................................................................AGCA-GGT-----------GCAG---CAGCCACAA-----------------AATC.................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................A----------AGCAACAGC-----------------------AGCA------GCAACAGCA-....................................................................................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCACCA------GC------------AACAGCAGCAG..	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...........AGCAGCCGCAGCAA---CAG------------CAACAG...........................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...........AGCAGCCGCAGCAA---CAG------------CAA..............................................................................................................................................................................................................................................................................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.............................AG------------CAACAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.15	3	0	3	0	0	0	0	0	0	0	0
..............AGCCGCAGCAA---CAG------------CAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................	21	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............GCCGCAGCAA---CAG------------CAACAG...........................................................................................................................................................................................................................................................................................................................................................................................	19	13	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CACCA------GC------------AACAGCAGCAGC.	19	20	0.05	1	0	0	0	0	1	0	0	0	0	0
..............................G------------CAACAGCAGCAGCAGCAGCATC...........................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0
..................GCAGCAA---CAG------------CAACAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................AACAGCAGCAGCAGCAGCATC...........................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0

droPer2

CAG-CAATAGCAACATCAGCAACGG------------------CAACGGCAACAGCAGTGGCGCCAA------GAACAAC--AACAACTACAAACA---GCACAAG------------AACATGGCCAGCAATGGCAATCAGAATGGTGGCG------GG---------------GATCA---------------------CGATTACGAGG--------------ACAT-------------------------------------CTATCTGGTGCGGGAA-GAGT---------------------------CGC----------------------------------------------------------GCAAGCAGCACCAGCACCA------GC------------AGCAGCACCAGAT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

CAA-CAGCAACAGCAACAACAGCAG------------------CAACAACAACAGCAGCAGCAACAA------CAGCAAC--AGCAACAACAACAG---CAGCA----------ACAACAGCAACA-----------------------GCAACAACAGC------A-GCA--------------G---CAGCAGCAACTGCAACAACAGCAG-----------------CAGCAACAGCAACAACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAACAGCAACAACAGCA------AC------------AACAGCAGCAACA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................GCAG------------------CAACAACAACAGCA...................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.15	3	0	0	0	3	0
............................................................................................ACAG---CAGCA----------ACAACAGCAACA-----------------------GC.....................................................................................................................................................................................................................................................................................	23	7	0.14	1	0	0	0	1	0
....................................................................................CAACAACAACAG---CAGCA----------ACAACA....................................................................................................................................................................................................................................................................................................................	23	20	0.10	2	0	0	0	2	0
................................................ACAACAGCAGCAGCAACAA------C..................................................................................................................................................................................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	2
....................................................CAGCAGCAGCAACAA------CAGCA..............................................................................................................................................................................................................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0
..........................................................................AGCAAC--AGCAACAACAACAG---CAGCA----------..........................................................................................................................................................................................................................................................................................................................	25	20	0.10	2	0	2	0	0	0
................................................................................................................................................................................................................................................................................................................................AG-----------------------------------------------------CAGCAACAGCAACAACAGCA------A..........................	23	20	0.10	2	0	2	0	0	0
......................................................................................................................................................................................................................................................AAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAACA.............................................	19	20	0.10	2	0	0	0	2	0
..................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCA------AC------------AACAGCAGCAA..	22	12	0.08	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAACAGCAACAA......................................	23	17	0.06	1	0	1	0	0	0
.............................................................................................................................................................AGC------A-GCA--------------G---CAGCAGCAACTGCA.................................................................................................................................................................................................................................	22	17	0.06	1	0	1	0	0	0
....................................................................................................................................................................................................................................................ACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAACAGC...........................................	23	18	0.06	1	0	0	1	0	0
................................................................................................................................................................................................................................................AACAACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAAC..............................................	24	19	0.05	1	0	0	0	1	0
................................................................................................................................................................................................................................................AACAACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAACA.............................................	25	19	0.05	1	0	1	0	0	0
...........................................................................GCAAC--AGCAACAACAACAG---C........................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCA------AC------------AACAGCAGCA...	23	20	0.05	1	0	0	0	0	1
............................................................................................................................................................................................................CAACAGCAG-----------------CAGCAACAGC............................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	1
...............................................................................................................................................................................................................................................CAACAACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGC.................................................	22	20	0.05	1	0	1	0	0	0
.......CAACAGCAACAACAGCAG------------------CAACA............................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0
.............................................................................................................................................................................................................AACAGCAG-----------------CAGCAACAGC............................................................................................................................................................................................	18	20	0.05	1	0	0	0	1	0
....................AGCAG------------------CAACAACAACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	1	0
..........................................................................................................................................................................................................AACAACAGCAG-----------------CAGCAACAGC............................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................................CAACAGCAACAACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------C....................................................	25	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................................................................CAACAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAAC..............................................	22	20	0.05	1	0	0	0	1	0
................CAACAGCAG------------------CAACAACAACAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
..................ACAGCAG------------------CAACAACAACAGCA...................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1
.....................................................................................................................................................................................................................................................CAAC--AACATC---------------------------------------------------------------AG-----------------------------------------------------CAGCAAC..............................................	19	20	0.05	1	0	0	0	1	0
.............................................................................AAC--AGCAACAACAACAG---CAGCA----------..........................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
..........................................................................................................................AACA-----------------------GCAACAACAGC------A-GCA--------------G---CA.............................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
...................................................................................................................CAACAGCAACA-----------------------GCAACAACAGC------A-GCA--------------G---CA.............................................................................................................................................................................................................................................	29	20	0.05	1	0	0	1	0	0
.............CAACAACAGCAG------------------CAACAACAAC.......................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
.........................................................................................................................CAACA-----------------------GCAACAACAGC------A-GCA--------------G---C..............................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	1	0
.............................................................................AAC--AGCAACAACAACAG---CAGCA----------ACA.......................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
.........................................................................................................................CAACA-----------------------GCAACAACAGC------A-GCA--------------G---CAGCAG.........................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
........................................................................................AACAACAG---CAGCA----------ACAACAGC..................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0
............................................................................CAAC--AGCAACAACAACAG---CA.......................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	1	0
...............................................AACAACAGCAGCAGCAACAA------C..................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0
...............................................AACAACAGCAGCAGCAACAA------...................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	1	0
..................................................AACAGCAGCAGCAACAA------CAGCAAC--A.........................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0

droVir3

CAG-CAGCAGCAGCAACAACAGCAG------------------CAACAGCAGCAGCAACAGCACCAA------CAACAGC--AGCAACAACAGCAG---CAACA----------GCAGCAGCAGC-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------CAGCAGCAGCAG--CAC---------------CAGCAACAG----------------------TCAACGCCACAGCAAA-ACGA------------------TGTCTACCTC---AGT-----------------------------------------------------CAGCAGCAACTTGCATACCA------GC------------AGCAGCAACAGCA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
................................................................................................................................................................................................................................................................................GCCACAGCAAA-ACGA------------------TGTCT.....................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................CAGCAAA-ACGA------------------TGTCTACCTC---AGT-----------------------------------------------------CA...................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................TC---AGT-----------------------------------------------------CAGCAGCAACTTGCATACCA------...........................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................AGCAGCAACAGCACCAA------CAACA..............................................................................................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................ACAGCAGCAGCAACAGCACC...........................................................................................................................................................................................................................................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................GCACCAA------CAACAGC--AGCAACA...................................................................................................................................................................................................................................................................................................................................................	21	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................CAACAGCAGCAGCAACAGCAC............................................................................................................................................................................................................................................................................................................................................................................	21	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................CAACA----------GCAGCAGCAGC-----------------AAC...........................................................................................................................................................................................................................................................................................	19	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....AGCAGCAGCAACAACAGCAG------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.10	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AA------CAGCAGCAGCAG--CAC---------------CAGC............................................................................................................................................................................................	21	10	0.10	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................C--AGCAACAACAGCAG---CAACA----------GCAGC.....................................................................................................................................................................................................................................................................................................................	25	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.............................................................................AGC--AGCAACAACAGCAG---CA.......................................................................................................................................................................................................................................................................................................................................	19	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................A------------------GCAGCAGCAGCAA------CAGCA...........................................................................................................................................................................................................................	19	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................AGCAA------CAGCAGCAGCAG--CA................................................................................................................................................................................................................	19	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AACAACAGCAG---CAACA----------GCAGCAGCAGC-----------------..............................................................................................................................................................................................................................................................................................	27	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACAGCAG------------------CAACAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAGCAG------------------CAACAGCAGCAGCAA..................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CAGCAG------------------CAACAGCAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................................................C-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............CAACAACAGCAG------------------CAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................GCAA------CAGCAGCAGCAG--CAC---------------................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AGCAGCAACAACAGCAG------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AACAACAGCAG---CAACA----------GCAGCAGC..................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........AGCAACAACAGCAG------------------CAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................CAGC--AGCAACAACAGCAG---CAACA----------..........................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CAG---CAACA----------GCAGCAGCAGC-----------------A.............................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CAA------CAGCAGCAGCAG--CAC---------------CA..............................................................................................................................................................................................	20	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................ACAGCAG---CAACA----------GCAGCAGCAGC-----------------AACA------------..............................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......CAGCAGCAACAACAGCAG------------------CAAC.............................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AACAGCAG---CAACA----------GCAGCAGCAGC-----------------..............................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................GC--AGCAACAACAGCAG---CAACA----------..........................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................AG---CAACA----------GCAGCAGCAGC-----------------AACA------------GC------......................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................A----------GCAGCAGCAGC-----------------AACA------------GC------A------------------GCA................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGCAACAACAGCAG------------------CAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................GCAG---CAACA----------GCAGCAGCAGC-----------------AAC...........................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................CAACA----------GCAGCAGCAGC-----------------AACA------------GC------A------------------GC.................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CAGCAG------------------CAACAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....AGCAGCAGCAACAACAGCAG------------------C................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AGCAGCAACAACAGCAG------------------CAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................AGCAGC-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CAGCAGCAGCAACAACAGCAG------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................ACAGC--AGCAACAACAGCAG---CAAC.....................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACAGCAG------------------CAACAGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................AGCAGCAGC-----------------AACA------------GC------A------------------GCA................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GCAACAACAGCAG------------------CAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......GCAGCAGCAACAACAGCAG------------------.................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CAGCAGCAGCAACAACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................GCAGCAGCAGC-----------------AACA------------GC------A------------------GCA................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................AGC--AGCAACAACAGCAG---CAACA----------GCA.......................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AACAGCAG---CAACA----------GCAGCAGCAGC-----------------A.............................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................AACAGC--AGCAACAACAGCAG---CA.......................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AACAACAGCAG---CAACA----------GCAGC.....................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AGCAACAACAGCAG---CAACA----------GCAGCAGCA.................................................................................................................................................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................AGCAG------------------CAACAGCAGCAGCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................GCAG---CAACA----------GCAGCAGCAGC-----------------AACA------------G.............................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................ACA------------GC------A------------------GCAGCAGCAGCAA------CAGCAGC.........................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CAGCAGCAGCAA------CAGCAGCAG.......................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................CAGCAGCAA------CAGCAGCAGCA.....................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................C-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------CAGC............................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................AG---CAACA----------GCAGCAGCAGC-----------------AA............................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CAACAGCAG------------------CAACAGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................CAGC-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------C...............................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AGCAACAACAGCAG---CAACA----------GC........................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................A------------GC------A------------------GCAGCAGCAGCAA------CAGCAGCAG.......................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................AGCAG---CAACA----------GCAGCAGCAGC-----------------AACA------------GC------......................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............CAACAACAGCAG------------------CAACAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GCAG------------------CAACAGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GCAGCAGC-----------------AACA------------GC------A------------------GCAGC..............................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................AGCAGCAGC-----------------AACA------------GC------A------------------GC.................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................AG---CAACA----------GCAGCAGCAGC-----------------AACA------------GC------A------------------...................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................GCAGC-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................GCAGCAGCAGCAA------CAGCAGC.........................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CAG---CAACA----------GCAGCAGCAGC-----------------AAC...........................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................AGCAGC-----------------AACA------------GC------A------------------GCAGCAGC...........................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................AACAGCAG------------------CAACAGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......GCAGCAGCAACAACAGCAG------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................CAACA----------GCAGCAGCAGC-----------------AACA------------GC------A------------------GCAGCA.............................................................................................................................................................................................................................................	29	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CAACAGC--AGCAACAACAGCAG---CA.......................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AACAACAGCAG------------------CAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................GC-----------------AACA------------GC------A------------------GCAGCAGCAGCAA------C...............................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CAGCAACAACAGCAG------------------CAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................CAGCAGC-----------------AACA------------GC------A------------------GCAGC..............................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........AGCAACAACAGCAG------------------CAACAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AACAACAGCAG------------------CAACAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CAACAACAGCAG---CAACA----------GCAGCA....................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TAG-CAACAACAGCAGCAGCAGCAA------------------CAGCAGCAAC---AACAGTAGCAG------CAGCAGC--AACAGCAGCAATAG---CAACA----------GTAGCAGCAATC--------------GAAATAGTAATA------GG------A-GAA-----------ACAG---------------CAGCCACAGCCA-----------------CATCAACAAAGACAAGAAC--AGCAGCAA------------------------------------------------------------------------------------------------------C-----------AGCAATAGCAGCAGCAGCAACA------GC------------AGCAGCAGAAACA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------C-----------AGCAATAGCAGCAGCAGCA....................................	21	15	0.07	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................GCAACA------GC------------AGCAGCAGAAA..	19	16	0.06	1	1	0	0	0	0	0
..................................................AAC---AACAGTAGCAG------CAGCA..............................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	1

droGri2

CAA-CATCAGCAGCAGCAGCAGCAA------------------CAGCA---ACAGCAACAGCAGCAG------CAGCAGC--AGCAGCAGCATGAG---CAACA----------ACAACGGCAACA--------------GCAACAGCAGCA------GCAACAACA------------------G---------------CAACAACAACAA-----------------CAACAAATGCATCACCATC--ACCATCAT------------------------------------------------------------------------------------------------------C-----------AGCAACAACAACAACAGCAACA------GC------------AGCAGCAGCAACA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
............................................................................................................................................................................................................................................ATGCATCACCATC--ACCATCAT------------------------------------------------------------------------------------------------------C-----------AGCAA..................................................	27	1	1.00	1	1	0
................................................................................................................................................................................................................................................ATCACCATC--ACCATCAT------------------------------------------------------------------------------------------------------C-----------AGCAACA................................................	25	1	1.00	1	1	0
.......................................................CAACAGCAGCAG------CAGCAGC--A.........................................................................................................................................................................................................................................................................................................................................................	20	20	0.10	2	0	2
..............................................CA---ACAGCAACAGCAGCAG------CA.................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1
.................................................................................................................................................AGCAGCA------GCAACAACA------------------G---------------CA.................................................................................................................................................................................................................................	19	20	0.05	1	1	0
.......................................................................................................................................................A------GCAACAACA------------------G---------------CAACAACAAC.........................................................................................................................................................................................................................	21	20	0.05	1	1	0
............GCAGCAGCAGCAA------------------CAGCA---A........................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	1	0
.................................................................................................................................................AGCAGCA------GCAACAACA------------------G---------------CAACA..............................................................................................................................................................................................................................	22	20	0.05	1	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACA------GC------------AGCA.........	19	20	0.05	1	1	0

dsi_10047

x:10114720-10114807 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads