ID:

dsi_10046

 Coordinate:

2r:3414333-3414452 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -13.7 -13.7

Flybase annnotation

CDS [2r_3414332_3414332_+]; five_prime_UTR [2r_3414157_3414331_+]; CDS [2r_3414453_3414641_+]; exon [2r_3414453_3414641_+]; exon [2r_3414157_3414332_+]; intron [2r_3414333_3414452_+]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------##################################################
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGTCGTCGGCTGCGGGAGCCCGTGTGCCCAGCTTGGAACTGGGATCCGACCCAGTCCACGTCCGTCTCGTCCCCGCTAAATTTGTAACTCTTGTTTCCCCGTCTTGTCCCCTCAGTGCATACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTT
**************************************************************************...........((.((((.(((((......))))))))).))..............................************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
.................................................................................................................................................................................................GAGATGGACAAGCTGGATGCC...... 21 0 1 3.00 3 0 1 0 0 2 0 0 0 0 0
..........................................................................CCGTGTGCCCAGCTTGGAACT............................................................................................................................. 21 0 1 3.00 3 0 0 2 0 0 1 0 0 0 0
...............................................................................................................................................................................................TTGAGATGGACAAGCTGGATGCC...... 23 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0
...........................................................GTCGGCTGCGGGAGCCCGT.............................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATTGAGATGGACAAGCTGGAT......... 21 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0
...........................................AAGCAAAGTGAGTGTCGTCG............................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATTGAGATGGACAAGCTGGATGC....... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGAGATGGACAAGCTGGATGC....... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...........................................................GTCGGCTGCGGGAGCCC................................................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................GCTTGGAACTGGGATCCGACCC................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GATGGACAAGCTGGATGCCAATTT. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................TGAGTGTCGTCGGCTGCGGGA.................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATGGACAAGCTGAATGCC...... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CCATTGAGATGGACAAGCTGGTT......... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................ATGGACAAGCTGGATGCC...... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................CGCTAAATTTGTAACTCT.......................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATTGAGATGGACAAGCTGGA.......... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................TGCGGGAGCCCGTGTGCCA........................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTTCCCCGTCTTGTCCCCTCAG.................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TCCGTCTCGTCTCCGC......................................................................................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................CTAAATTTGTTACTATTGTT...................................................................... 20 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................TTGAGATGGAGAAGCT............. 16 1 18 0.11 2 2 0 0 0 0 0 0 0 0 0
.................................................AGTGCGTGTCGTCGGG........................................................................................................................................................... 16 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0
........................................................................................................CCCAGTCAACGTCGGTC................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 1 0 0
..................................................................................CCAGCTTAGAACTGG........................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 0 0 0 1 0
...............................AGCAGACGTAAGAAG.............................................................................................................................................................................. 15 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0
.......................................................TGTCGTGGGCTGCAGGCGC.................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................AGATGGACAAGCTGGGCG........ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CACGCAAGCGCGGTTTATGAATTGTTGTTAATCGTTTGCATTCTTCGTTTCACTCACAGCAGCCGACGCCCTCGGGCACACGGGTCGAACCTTGACCCTAGGCTGGGTCAGGTGCAGGCAGAGCAGGGGCGATTTAAACATTGAGAACAAAGGGGCAGAACAGGGGAGTCACGTATGGGAGTGCCGCCGGTAACTCTACCTGTTCGACCTACGGTTAGAA
**************************************************************************...........((.((((.(((((......))))))))).))..............................************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 M023
head
 SRR1275487
Male larvae
......................................................................CTTGGGCACAGGGGTGGAAC.................................................................................................................................. 20 3 3 13.00 39 34 1 0 1 1 0 0 0 0 0 0 2 0
..........................................................................GGCACAGGGGTGGAACCTT............................................................................................................................... 19 2 1 12.00 12 7 4 1 0 0 0 0 0 0 0 0 0 0
..........................................................................GGCACAGGGGTGGAACCTTC.............................................................................................................................. 20 3 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGGGGCAGAACAGGGGAGTC.................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TTGGGCACAGGGGTGGAACCT................................................................................................................................ 21 3 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GGCAGAACAGGGGAGTCACGT.............................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................GGTCAGGTGCAGGCAGAGCAG.............................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GCACACGCGTCGAACCTTGAC............................................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................CTTGGGCACAGGGGTGGAACC................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GCACAGGGGTGGAACCTT............................................................................................................................... 18 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................TTGTTGTTAATCGTTTGCAT................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................AGGGGAGTCACGTATGGGAGT...................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................GGGCACAGGGGTGGAACCTTC.............................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GGGCAGAACAGGGGAGTCACGT.............................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................CCTAGGCTGGGTCAGGTGC......................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................CTTGGGCACAGGGGTGGAACCTT............................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GCCGACGCCCTCGGGCACA............................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................CTAGGCTGGGTCAGGTGCAGG...................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................GGCACAGGGGTGGAACCTTCAC............................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTCGGGCACAGGGGTGGAA................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTTGGGCACAGGGGTCGA.................................................................................................................................... 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CCTTGGGCACAGGGGTGGAA................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................TGGGCACAGGGGTGGAACCTT............................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................TTGGGCACAGGGGTGGAAC.................................................................................................................................. 19 3 12 0.17 2 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................GCACAGGGGTGGAACCTTC.............................................................................................................................. 19 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GGTGCAGGCAGAGCAAGACC.......................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................TCTCAGTTTCACTCGCAGC................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................AAAATAGGGGCAGAACA.......................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GAGAACAAAGGGGCCTA............................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................GGCACAGGGGTGGAAC.................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3414283-3414502 + dsi_10046 GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCCAGCTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAATTTGTAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droSec2 scaffold_1:216297-216516 + GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCCAGCTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAATTTGTAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTT
dm3 chr2R:2549904-2550123 + GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCCAGTTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAATTTGTAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droEre2 scaffold_4929:19995382-19995598 - GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CAGCGGGA-----------GCCCGAGTG------------------------CCCAGCTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAAT---TAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCTGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droYak3 2L:15294837-15295053 + GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGCAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CAGCGGGA-----------GCTCGAGTG------------------------CCCAGCTTG------------------------------------------------------------------GTACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAAT---TAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACAGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droEug1 scf7180000409462:3423504-3423733 + GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAGCAAAGTGAGTGGT----CGTCGGC-----------------------------CAGTGAAA-----------GACCAAGTG------------------------CCCACTCTG-----------------------------------------------------------GTGTTGGGTGTTGG-----GATCCA-----GTTCTCATC---------CCGTTTCGTTTCTC-GC-TAAAT---TAACTCTTGTTTC----C-GTTTCC----TTGCCCCGTCTCGT--------------CCAGTGCACACCCTCACCGCGGCCATTGAGATGGATAAGCTGGATGCCAATCTT
droBia1 scf7180000302292:3601294-3601533 - GTGCGTTCGCGCCAAATACTTAACGACAATTAGCAAGCGAAAGAAACAAAGTGAGTGT-----CGTCGGG-----------------------------CAGCGAAA-----------GCCCGAGTGCTGGGACCTGGACTGGGATCGGGA---------------------------------------------------------------------------------------------TCCACATCCACATCCACACAATCCCGTTTCGCCTCTT-GC-TAAAT---TAACTCTTGTTTC----CCC-----C---------CGTCTCGC-TCACCAC-C-CACCCAGTGCACACTCTCACGGCGGCCATCGAGATGGACAAGCTGGATGCAAATCTC
droTak1 scf7180000413887:53097-53324 - GTGCGTTCGCGCCAAATACCTAACAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTGTCG--CCGTCGGC-----------------------------CAGCG-AA-----------GCCCGAGTG------------------------CT--GCCTG------------------------------------------------------------------GGAAT---ATCC---------------ACATCCACACAATCCCGTTTCGCCTCTT-GC-TAAAT---TAACTCTTGTCTC----CCGTTCTCCCGTCTGCCCCCCCT------------CC--ATCAGTGCACACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droEle1 scf7180000491217:468056-468259 - GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGT-----CGTCGGG-----------------------------AAGCGAAA-----------GTCCGAGCG------------------------CCCAGTTTG------------------------------------------------------------------GCACTTGGATCCA---------------CATCCA--------------GTT-TTT-GC-TAAAT---TAACTCTTGTCTC----CTC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCAGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droRho1 scf7180000766409:435756-435962 + GTGCGTTCGCGCCAAATACCTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGT-----CGTCGGG-----------------------------CAGCGAAA-----------GCTTGAGTG------------------------TCCAGCTTG------------------------------------------------------------------GCACTGGGATCCA---------------CATCCA--------------GTTTCTC-GC-TAAAT---TAACTCTTGTTTC----CCC-----C---------CGTCTTGT-C-------CC--CTCAGTGCACACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droFic1 scf7180000453955:756642-756833 - GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGTCG--CCGTCGAC-----------------------------CAGCAAAA-----------GCC-GA------------------------------------------------------------------------------------------------------------------------TCCACCTCCCCAGCCA--------------GTTTCTC-GGCT-AAC---TAACTCTCGTCTC----C-C----------------GTCTTGTCC-------CC--CCCAGTGCATACCCTCACGGCAGCCATTGAGATGGACAAGCTGGATGCCAATCTT
droKik1 scf7180000302470:115246-115424 + -TGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGT-----CG---GC-----------------------------TAA-CGGA-----------GCT-GTCGC------------------------CCCAGCTTG--------------------------------------------------------------------------------------------------------------TCCCGTT--TC-GG-TAACG---TAAATCCCGTTTC----T-C----------------GTTTTGT-C-----------TGCAGTGCATACCCTTACGGCAGCCATAGAGATGGATAAGCTCGACGCCAACATT
droAna3 scaffold_13266:18464448-18464648 - GTGCGTTCGCGCCAAACACTAAATAACAATTAGCAAACGCAAGAAACAGAGTGAGTGTCGGTCCGGAGGC-----------------------------CAG------TTC------------CGTG------------------------CCAAGTTT-----------------------------------------------------------------------------CCGATCCC-----GTTCCCGT-------------TCCCGTG-CCCCG----TAC---TAATTCTTTCCTCCTTGCCC----------------GTCTG-----------CT--CCCAGTGCATACCCTAACGGCGGCCATCGAGATGGACAAACTGGATGCCAATATG
droBip1 scf7180000394114:20117-20311 - GTGCGTTCGCGCCAAACACTAAATAACAATTAGCAAACGCAAGAAACAGAGTGAGTGTCGGTCCGGAGGC-----------------------------CAG------TTC------------CGTG------------------------CCAAGTTT----------------------------------------------------------------------------T------CC-----GTTCCCGT-------------TCCCGTG-CCC-G----TAC---TAATTCTTTCCTCCTTGCCC----------------GTCTG-----------CT--CCCAGTGCATACCCTAACGGCGGCCATCGAGATGGACAAACTGGATGCCAATATG
dp5 3:812873-813056 + GTGCGTTCGCGCCAAATATTTATTAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTGT-----TCCCCCGCCCTGCCCCCCTTCCAAAGAGTTCGTGTG----------------------------------------------------GTCAGTTTC--------------------------------------------------------------------------------------------------------------------------CA-TAACT---CAAGTCTTGTTTC----CCC-------------------------------C--GACCCAGTGCATACCCTTACGGCTGCCATTGAGATGGACAAGCTGGATGCCAATTTG
droPer2 scaffold_2:988709-988892 + GTGCGTTCGCGCCAAATATTTATTAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTGT-----TCCCCCGCCCTGCCCCCCTTCCAAAGAGTTCGTGTG----------------------------------------------------GTCAGTTTC--------------------------------------------------------------------------------------------------------------------------CA-TAACT---CAAGTCTTGTTTC----CCC-------------------------------C--GACCCAGTGCATACCCTTACGGCTGCCATTGAGATGGACAAGCTGGATGCCAATTTG
droWil2 scf2_1100000004954:2046148-2046304 - GTGCATTCGCGCCAAAT----AACAACAATTAGCGAAGACTAGAAGCAGAGTGAGTGTT----CGTCAG--------------------------------------------------TGTGTGTG------------------------TGCCGTAAA------------------------------------------------------------------AAACCAACATCCTACCCA-----CTCC--------------------------------------------------------------------------------------------TC--TTTAGTGCATACCCTTACGACGGTCATCGAGATGGACAAACTGGATGCAAATTTA
droVir3 scaffold_12875:15432061-15432116 + GTGCGTGCGCGCCAATTATTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:8365292-8365347 - GTGCGTGCGCGCCAATTATTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:12233998-12234246 + GTGCGCGCGCGCCAATTATTTAACAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTCT-----TGTTGT------------------------------TTTCGTTATTTCCATGATAA---AAGTG------------------------CCCAATTTACACACATACAATCATATATACACACACACACGCAAATACATACATACATATACACATATATGTGTAGTATTTGTATT---------------------------------------------------------------AAGTTG----CCC----------------GCTTGTT-T-------CT--CGCAGTGCACACGCTGAGTGCAGCAATCGAAATGGATAAACTGGATGCCAACCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCCAGCTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAATTTGTAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................GAGATGGACAAGCTGGATGCC......2113.00312000000000000000
........................................................................................................................CCGTGTG------------------------CCCAGCTTG------------------------------------------------------------------GAACT.............................................................................................................................................................................2113.00300000021000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTGAGATGGACAAGCTGGATGCC......2312.00211000000000000000
................................................................GTCGG------------------------------CTGCGGGA-----------GCCCGT........................................................................................................................................................................................................................................................................................1912.00200000000002000000
......................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATGGACAAGCTGGAT.........2112.00200000011000000000
...........................................AAGCAAAGTGAGTGT-----CGTCG................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATGGACAAGCTGGATGC.......2311.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGAGATGGACAAGCTGGATGC.......2111.00100100000000000000
................................................................GTCGG------------------------------CTGCGGGA-----------GCCC..........................................................................................................................................................................................................................................................................................1711.00100000000001000000
...........................................................................................................................................................GCTTG------------------------------------------------------------------GAACTGGGATCCGACCC.................................................................................................................................................................2211.00110000000000000000
...................................................TGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------..............................................................................................................................................................................................................................................................................................2111.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATGGACAAGCTGGATGCC......1811.00100000000001000000
........................................................................................................................................................................................................................................................................................C-GC-TAAATTTGTAACTCT........................................................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATGGACAAGCTGGA..........2011.00100000000000001000
....................................................................................................TGCGGGA-----------GCCCGTGTG------------------------CCA..........................................................................................................................................................................................................................................................1911.00100000000001000000
..............................................................................................................................................................................................................................................................................................................TTTC----CCC----------------GTCTTGT-C-------CC--CTCAG..................................................2211.00100000000001000000
droSec2
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCCAGCTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAATTTGTAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................AGCAAACGTAAGAAGCAAAGTGA..............................................................................................................................................................................................................................................................................................................................................................2311.0010001
................................................................................................................................................................................................................................................................................................................................................................AGTGCATACCCTCACGGCGGC...............................2111.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................GAGATGGACAAGCTGGATGCC......2111.0010010
............................................................................................................................................................................................................................................................CACGT----------CCGTCTCGTC-CCC-GC-T......................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................GATGGACAAGCTGGATGC.......1811.0010010
........................................................................................................................................................................................................................................................................................................CTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCA...................................................2711.0010100
.........................................................................................................................................................CAGCTTG------------------------------------------------------------------GAACTGGGATCCG.....................................................................................................................................................................2011.0010001
..........................................................................................................................................................................................................................................ATCCGACCCA-----GTCCACGT----------CCG......................................................................................................................................2111.0010010
dm3
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCCAGTTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAATTTGTAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...............................................AAAGTGAGTGT-----CGTCGG------------------------------CTGC.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
............................ATTAGCAAACGTAAGAAGCAA...................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
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.............................TTAGCAAACGTAAGAAGC.....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
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........................................................................................................................................................................................................................................................................................C-GC-TAAATTTGTAACTCTTGC.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................................................................................................ATGGACAAGCTGGATGCCAAT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................ACGTAAGAAGCAAAGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................AAAGTGAGTGT-----CGTCGG------------------------------C................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................AGTGT-----CGTCGG------------------------------CTGCGGGA-----------G.............................................................................................................................................................................................................................................................................................2011.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TAGCAAACGTAAGAAGCAAAGT................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CATTGAGATGGACAAGCTGGATGCCAA....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TGCGGGA-----------GCCCGTGTG------------------------CCCAGC.......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................GTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------.............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AATTAGCAAACGTAAGAAGCAAAGTG...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.................................................AGTGAGTGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCG.........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............ATACTTAACAACAATTAG...................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................G------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCC..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................GT-----CGTCGG------------------------------CTGCGGGA-----------GCCCA.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.......CGCGCCAAATACTTAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..................................................................CGG------------------------------CTGCGGGA-----------GCCCGTGT......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CCGTGTG------------------------CCCAGTTTG------------------------------------------------------------------GAACTG............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TCACGGCGGCCATTGAGATGGAC..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTTC----CCC----------------GTCTTGT-C-------CC--CTCAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
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...............................................................................................................................................................................................................................................................................................................TTC----CCC----------------GTCTTGT-C-------CC--CTCAGT.................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................CACGT----------CCGTCTCGTC-CCC-GC-T......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GT-----CGTCGG------------------------------CTGCGGGA-----------GCCC..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...............................AGCAAACGTAAGAAGCAAAGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................AGAAGCAAAGTGAGTGT-----CGTCGG------------------------------C................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GAGATGGACAAGCTGGATGCC......2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................A-----GTCCACGT----------CCGTCTCGTC-C.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................CGTCGG------------------------------CTGCGGGA-----------GCCCGTG.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATGGACAAGCTGGATGC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................C----CCC----------------GTCTTGT-C-------CC--CTCAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CC...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................TAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------C................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CAAAGTGAGTGT-----CGTCGG------------------------------CTG..............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................AGCAAACGTAAGAAGCAAAGTGAG.............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GTAAGAAGCAAAGTGAGTGT-----C....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................................................................................................CTGCGGGA-----------GCCCGTGTG------------------------CC...........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................C----------------GTCTTGT-C-------CC--CTCAGTGCATA............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTGCGGGA-----------GCCCGTGTG------------------------CCCA.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TCCGACCCA-----GTCCACGT----------CCGT.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
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...................................................................................................................................................................................................................................................................................................TGTAACTCTTGTTTC----CCC----------------GTC........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................AGTGT-----CGTCGG------------------------------CTGCGGG..........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................GCAAACGTAAGAAGCAAAGTGA..............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATGGACAAGCTGGATG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CCCA-----GTCCACGT----------CCGTCTCGT................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...CGTTCGCGCCAAATACTTAA.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TAAGAAGCAAAGTGAGTGT-----CG...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................AACGTAAGAAGCAAAGTG...............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................CC-GC-TAAATTTGTAACTCTTA......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CTTGTTTC----CCC----------------GTCTTGT-C-------CC--.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CACGGCGGCCATTGAGATGGAA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ACCCA-----GTCCACGT----------CCGTC....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GATGGACAAGCTGGATGCCAA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
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.........................................AGAAGCAAAGTGAGTGT-----CGTC.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................C----CCC----------------GTCTTGT-C-------CC--CTCA...................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CCTCACGGCGGCCATTGAGA.......................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAATTAGCAAACGTAAGAAGC.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................AGCAAACGTAAGAAGCAAA..................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTGAGATGGACAAGCTGGATGT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GTCGG------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCC..........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
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............................ATTAGCAAACGTAAGAAGCAAAT.................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................AGCAAACGTAAGAAGCAAAGTGAGT............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................CAACAATTAGCAAACGTAAGAAG......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................AGCAAACGTAAGAAGCAAAGTG...............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................G------------------------------CTGCGGGA-----------GCCCGTGTG------------------------CCCAG........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACTCTTGTTTC----CCC----------------GTCTTG.....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GATGGACAAGCTGGATGCCA.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTGT-----CGTCGG------------------------------CTGCGG...........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAACAATTAGCAAACGTAAG.........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.......................................................TGT-----CGTCGG------------------------------CTGCGGGA-----------GCCCG.........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GGCCATTGAGATGGACAAGCTGGATG........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............AAATACTTAACAACAATTAGC..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CCGACCCA-----GTCCACGT----------CCGTC....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................TTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGC...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................GTGAGTGT-----CGTCGG------------------------------CTGCG............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CTCACGGCGGCCATTGAGATG.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
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.....................................................................................................................................................................................................................................................................................................TAACTCTTGTTTC----CCC----------------GTCTT......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TGAGATGGACAAGCTGGATGCCAAA...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AAGAAGCAAAGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GGA-----------GCCCGTGTG------------------------CCCATG.......................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
droEre2
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGTAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CAGCGGGA-----------GCCCGAGTG------------------------CCCAGCTTG------------------------------------------------------------------GAACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAAT---TAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCTGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................AGCAAAGTGAGTGT-----CGTCGG------------------------------CT...............................................................................................................................................................................................................................................................................................................2214.0040000004
...........................................AAGCAAAGTGAGTGT-----CGTCGG------------------------------.................................................................................................................................................................................................................................................................................................................2111.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................GAGATGGACAAGCTGGATGC.......2011.0010000010
............................ATTAGCAAACGTAAGAAGCAAAT.................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...................................................................GG------------------------------CAGCGGGA-----------GCCCGAGTG------------------------CCCA.........................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................................................................................................................................AAAT---TAACTCTTGTTTC----CCC----------------G..........................................................................2111.0010100000
.................................................................................................................................................................................................................................................................................CGTC-CCC-GC-TAAAT---TAACTCTT.......................................................................................................2211.0010100000
droYak3
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGCAAGAAGCAAAGTGAGTGT-----CGTCGG------------------------------CAGCGGGA-----------GCTCGAGTG------------------------CCCAGCTTG------------------------------------------------------------------GTACTGGGATCCGACCCA-----GTCCACGT----------CCGTCTCGTC-CCC-GC-TAAAT---TAACTCTTGTTTC----CCC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACAGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................TAACTCTTGTTTC----CCC----------------GTCTT......................................................................2111.00101000000000
..............................................................................................................................................................................................................................................................................................................TTTC----CCC----------------GTCTTGT-C-------CC--CTCAG..................................................2211.00101000000000
..............................TAGCAAACGCAAGAAGCAAAGTGAGT............................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.............................TTAGCAAACGCAAGAAGCAAA..................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000
.............................................................................................................................................................................................................................................................................................................................................TGT-C-------CC--CTCAGTGCATACCCT........................................2111.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TTGAGATGGACAAGCTGGATG........2111.00100000100000
droEug1
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAGCAAAGTGAGTGGT----CGTCGGC-----------------------------CAGTGAAA-----------GACCAAGTG------------------------CCCACTCTG-----------------------------------------------------------GTGTTGGGTGTTGG-----GATCCA-----GTTCTCATC---------CCGTTTCGTTTCTC-GC-TAAAT---TAACTCTTGTTTC----C-GTTTCC----TTGCCCCGTCTCGT--------------CCAGTGCACACCCTCACCGCGGCCATTGAGATGGATAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotal
No Reads
droBia1
GTGCGTTCGCGCCAAATACTTAACGACAATTAGCAAGCGAAAGAAACAAAGTGAGTGT-----CGTCGGG-----------------------------CAGCGAAA-----------GCCCGAGTGCTGGGACCTGGACTGGGATCGGGA---------------------------------------------------------------------------------------------TCCACATCCACATCCACACAATCCCGTTTCGCCTCTT-GC-TAAAT---TAACTCTTGTTTC----CCC-----C---------CGTCTCGC-TCACCAC-C-CACCCAGTGCACACTCTCACGGCGGCCATCGAGATGGACAAGCTGGATGCAAATCTCSizeHit CountTotal NormTotal
No Reads
droTak1
GTGCGTTCGCGCCAAATACCTAACAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTGTCG--CCGTCGGC-----------------------------CAGCG-AA-----------GCCCGAGTG------------------------CT--GCCTG------------------------------------------------------------------GGAAT---ATCC---------------ACATCCACACAATCCCGTTTCGCCTCTT-GC-TAAAT---TAACTCTTGTCTC----CCGTTCTCCCGTCTGCCCCCCCT------------CC--ATCAGTGCACACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotal
No Reads
droEle1
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGT-----CGTCGGG-----------------------------AAGCGAAA-----------GTCCGAGCG------------------------CCCAGTTTG------------------------------------------------------------------GCACTTGGATCCA---------------CATCCA--------------GTT-TTT-GC-TAAAT---TAACTCTTGTCTC----CTC----------------GTCTTGT-C-------CC--CTCAGTGCATACCCTCACGGCAGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCGTTCGCGCCAAATACCTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGT-----CGTCGGG-----------------------------CAGCGAAA-----------GCTTGAGTG------------------------TCCAGCTTG------------------------------------------------------------------GCACTGGGATCCA---------------CATCCA--------------GTTTCTC-GC-TAAAT---TAACTCTTGTTTC----CCC-----C---------CGTCTTGT-C-------CC--CTCAGTGCACACCCTCACGGCGGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotal
No Reads
droFic1
GTGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGTCG--CCGTCGAC-----------------------------CAGCAAAA-----------GCC-GA------------------------------------------------------------------------------------------------------------------------TCCACCTCCCCAGCCA--------------GTTTCTC-GGCT-AAC---TAACTCTCGTCTC----C-C----------------GTCTTGTCC-------CC--CCCAGTGCATACCCTCACGGCAGCCATTGAGATGGACAAGCTGGATGCCAATCTTSizeHit CountTotal NormTotal
No Reads
droKik1
-TGCGTTCGCGCCAAATACTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGTGT-----CG---GC-----------------------------TAA-CGGA-----------GCT-GTCGC------------------------CCCAGCTTG--------------------------------------------------------------------------------------------------------------TCCCGTT--TC-GG-TAACG---TAAATCCCGTTTC----T-C----------------GTTTTGT-C-----------TGCAGTGCATACCCTTACGGCAGCCATAGAGATGGATAAGCTCGACGCCAACATTSizeHit CountTotal NormTotal
No Reads
droAna3
GTGCGTTCGCGCCAAACACTAAATAACAATTAGCAAACGCAAGAAACAGAGTGAGTGTCGGTCCGGAGGC-----------------------------CAG------TTC------------CGTG------------------------CCAAGTTT-----------------------------------------------------------------------------CCGATCCC-----GTTCCCGT-------------TCCCGTG-CCCCG----TAC---TAATTCTTTCCTCCTTGCCC----------------GTCTG-----------CT--CCCAGTGCATACCCTAACGGCGGCCATCGAGATGGACAAACTGGATGCCAATATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................GAGTGAGTGTCGGTCCGGA.................................................................................................................................................................................................................................................................................................................................................1912.002200000
..................................................................................................................................................................................................................................................................................................................................................................................GGCCATCGAGATGGACAAACTGGATGCC......2811.001010000
...................................AACGCAAGAAACAGAGTGAGTGTCGGT......................................................................................................................................................................................................................................................................................................................................................2711.001000010
................................................................................................................................................................................................................................................................................................................................................................AGTGCATACCCTAACGGCGGC...............................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................CATCGAGATGGACAAACTGGA..........2111.001100000
...............................AGCAAACGCAAGAAACAGA..................................................................................................................................................................................................................................................................................................................................................................1911.001000100
...........................................................................................................................................................................................................................................................................................................TTTCCTCCTTGCCC----------------GTCTG-----------CT--CCCAG..................................................2611.001100000
......................................GCAAGAAACAGAGTGAGTGTC.........................................................................................................................................................................................................................................................................................................................................................2111.001000010
........................................................................................................................................................................................................................................................................................................................C----------------GTCTG-----------CT--CCCAGTGCATAC...........................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................CATCGAGATGGACAAACT.............1811.001100000
droBip1
GTGCGTTCGCGCCAAACACTAAATAACAATTAGCAAACGCAAGAAACAGAGTGAGTGTCGGTCCGGAGGC-----------------------------CAG------TTC------------CGTG------------------------CCAAGTTT----------------------------------------------------------------------------T------CC-----GTTCCCGT-------------TCCCGTG-CCC-G----TAC---TAATTCTTTCCTCCTTGCCC----------------GTCTG-----------CT--CCCAGTGCATACCCTAACGGCGGCCATCGAGATGGACAAACTGGATGCCAATATGSizeHit CountTotal NormTotal
No Reads
dp5
GTGCGTTCGCGCCAAATATTTATTAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTGT-----TCCCCCGCCCTGCCCCCCTTCCAAAGAGTTCGTGTG----------------------------------------------------GTCAGTTTC--------------------------------------------------------------------------------------------------------------------------CA-TAACT---CAAGTCTTGTTTC----CCC-------------------------------C--GACCCAGTGCATACCCTTACGGCTGCCATTGAGATGGACAAGCTGGATGCCAATTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................CCAAAGAGTTCGTGTG----------------------------------------------------GTCAG........................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................ATGGACAAGCTGGATGCC......1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................GATGGACAAGCTGGATGCC......1911.0010000100000
......................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATGGACAAGCTGGATGCC......2411.0010100000000
.....................ATTAACAATTAGCAAGCGAAA..........................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................GATGGACAAGCTGGATGC.......1811.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................GCATACCCTTACGGCTGCCAT............................2111.0010100000000
............................................................................................................................................................TTTC--------------------------------------------------------------------------------------------------------------------------CA-TAACT---CAAGTCTTGT.....................................................................................................2111.0010100000000
.....................................................AGTGT-----TCCCCCGCCCTGCCCC.....................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................CCCCCTTCCAAAGAGTTCGTG...................................................................................................................................................................................................................................................................................................................2111.0010000001000
droPer2
GTGCGTTCGCGCCAAATATTTATTAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTGT-----TCCCCCGCCCTGCCCCCCTTCCAAAGAGTTCGTGTG----------------------------------------------------GTCAGTTTC--------------------------------------------------------------------------------------------------------------------------CA-TAACT---CAAGTCTTGTTTC----CCC-------------------------------C--GACCCAGTGCATACCCTTACGGCTGCCATTGAGATGGACAAGCTGGATGCCAATTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................GAGATGGACAAGCTGGAT.........1812.002200000
........................................................................................................................................................................................................................................................................................................................................................................................TGAGATGGACAAGCTGGATGCCAATT..2611.001100000
........................................................................................................................................................................................................................................................................................................................................................................................TGAGATGGACAAGCTGGA..........1811.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................GATGGACAAGCTGGATGC.......1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................AGATGGACAAGCTGGATGCC......2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................TGAGATGGACAAGCTGGATG........2011.001010000
.........................................................................................AGTTCGTGTG----------------------------------------------------GTCAGTTTC--------------------------------------------------------------------------------------------------------------------------CA-.......................................................................................................................2111.001000100
..................................................................................TCCAAAGAGTTCGTGTG----------------------------------------------------GTCC.........................................................................................................................................................................................................................................................2111.001000001
droWil2
GTGCATTCGCGCCAAAT----AACAACAATTAGCGAAGACTAGAAGCAGAGTGAGTGTT----CGTCAG--------------------------------------------------TGTGTGTG------------------------TGCCGTAAA------------------------------------------------------------------AAACCAACATCCTACCCA-----CTCC--------------------------------------------------------------------------------------------TC--TTTAGTGCATACCCTTACGACGGTCATCGAGATGGACAAACTGGATGCAAATTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................TAGAAGCAGAGTGAGTGTT----C....................................................................................................................................................................................................................................................................................................................................................2011.00100100
..................................................GTGAGTGTT----CGTCAG--------------------------------------------------TGTG.........................................................................................................................................................................................................................................................................................1911.00100001
.............................................................................................................................................................................................................................................CTACCCA-----CTCC--------------------------------------------------------------------------------------------TC--TTTAGT.................................................1911.00100010
..................................GAAGACTAGAAGCAGAGTGAGT............................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................................AAGCAGAGTGAGTGTT----CGTCA................................................................................................................................................................................................................................................................................................................................................2111.00100100
............................................................................................................................................................................................................................................................................................................................................................................................ATGGACAAACTGGATGCAAAT...2111.00100001
.....................................GACTAGAAGCAGAGTGAGTGTT----C....................................................................................................................................................................................................................................................................................................................................................2311.00100100
...........................................................................................................................................................................................................................................................................................................................................................................TTACGACGGTCATCGAGATGT....................2111.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................CATCGAGATGGACAAACTG............1911.00100010
.................................................AGTGAGTGTT----CGTCAG--------------------------------------------------TG...........................................................................................................................................................................................................................................................................................1811.00100001
.........................................................TT----CGTCAG--------------------------------------------------TGTGTGTG------------------------TGC..........................................................................................................................................................................................................................................................1911.00100001
.............................................GCAGAGTGAGTGTT----CGTCT................................................................................................................................................................................................................................................................................................................................................1911.00100001
.............................................GCAGAGTGAGTGTT----CGTCAG--------------------------------------------------T............................................................................................................................................................................................................................................................................................2111.00100001
..................................................................................................................................................................................................................................................................................................................................................................................GGTCATCGAGATGGACAAACTG............2211.00100100
........................................................................................................................................................................................................................................................................................................................................................................................CGAGATGGACAAACTGGATGC.......2111.00110000
......................................................................................................................................................................................................................................................................................................................................................................................ATCGAGATGGACAAACTG............1811.00110000
................................................................GTCAG--------------------------------------------------TGTGTGTG------------------------TGCCG........................................................................................................................................................................................................................................................1820.50100001
.........................................................TT----CGTCAG--------------------------------------------------TGTGTGTG------------------------CC...........................................................................................................................................................................................................................................................18200.05110000
droVir3
GTGCGTGCGCGCCAATTATTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................AACAATTAGCAAACGAAAGA........................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000020000000000000000000000000000
droMoj3
GTGCGTGCGCGCCAATTATTTAACAACAATTAGCAAACGAAAGAAACAAAGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GTGCGCGCGCGCCAATTATTTAACAACAATTAGCAAGCGAAAGAAGCAAAGTGAGTCT-----TGTTGT------------------------------TTTCGTTATTTCCATGATAA---AAGTG------------------------CCCAATTTACACACATACAATCATATATACACACACACACGCAAATACATACATACATATACACATATATGTGTAGTATTTGTATT---------------------------------------------------------------AAGTTG----CCC----------------GCTTGTT-T-------CT--CGCAGTGCACACGCTGAGTGCAGCAATCGAAATGGATAAACTGGATGCCAACCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:12 AM