ID:

dsi-mir-iab-4

Coordinate:

3r:8574115-8574182 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

3pUTR

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.8 -34.6 -34.4

Flybase annnotation

utr3 [utr3_plus_6122]; utr5 [utr5_plus_10994]; Antisense to utr3 [utr3_minus_7917]

No Repeatable elements found

Sense Strand Reads

GACACGGCATAATTTTCAGCACTTTTGGATAATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTGAAACACTTTTAATACACTTTAATAC

*****************************************.((((...(((((..((((((((((((.((((((.((..........)).)).)))).))))))))))))...)))))...)))).*****************************************
Read size # Mismatch Hit Count Total Norm Total M025

embryo

SRR553488

RT_0-2 hours eggs

SRR553487

NRT_0-2 hours eggs

M053

female body

O001

Testis

GSM343915

embryo

O002

Head

SRR902009

testis

SRR618934

dsim w501 ovaries

SRR553485

Chicharo_3 day-old ovaries

SRR902008

ovaries

M024

male body
SRR553486

Makindu_3 day-old ovaries

M023

head

SRR1275483

Male prepupae
SRR1275487

Male larvae
SRR1275485

Male prepupae
........................................................ACGTATACTGAATGTATCCTGA.......................................................................................... 22 0 1 3761.00 3761 871 1303 822 140 137 130 103 86 34 38 43 19 24 6 3 2 0
........................................................ACGTATACTGAATGTATCCTG........................................................................................... 21 0 1 467.00 467 236 36 27 75 22 24 7 5 10 1 0 18 1 3 2 0 0
........................................................ACGTATACTGAATGTATCCTGG.......................................................................................... 22 1 1 205.00 205 199 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0
........................................................ACGTATACTGAATGTATCC............................................................................................. 19 0 1 137.00 137 69 0 1 0 39 0 25 0 0 0 0 3 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCT............................................................................................ 20 0 1 95.00 95 6 15 13 1 23 4 10 1 6 8 0 2 5 1 0 0 0
........................................................ACGTATACTGAATTTATCCTGA.......................................................................................... 22 1 1 43.00 43 36 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAA......................................................................................... 23 1 1 32.00 32 19 3 3 0 0 0 0 2 0 0 2 1 1 0 0 0 1
........................................................ACGTATACTGAATGTATC.............................................................................................. 18 0 1 32.00 32 16 0 0 0 4 0 5 0 6 0 0 1 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGTA........................................................ 22 0 1 26.00 26 0 1 1 0 5 1 1 14 0 0 3 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGA.......................................................................................... 21 0 1 20.00 20 0 7 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCTG........................................................................................... 21 1 1 15.00 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAT......................................................................................... 22 1 1 13.00 13 5 3 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATCTATCCTGA.......................................................................................... 22 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAACA..................................................... 22 0 1 12.00 12 0 7 2 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAA......................................................................................... 22 1 1 12.00 12 4 2 4 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTG........................................................................................... 20 0 1 11.00 11 1 1 0 8 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGTAAC...................................................... 24 0 1 11.00 11 4 0 1 0 3 1 2 0 0 0 0 0 0 0 0 0 0
........................................................ACTTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 10.00 10 4 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCTGG.......................................................................................... 22 2 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATTC............................................................................................. 19 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAAC...................................................... 21 0 1 7.00 7 4 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................TGAATGTATCCTGAGTA....................................................................................... 17 1 3 6.67 20 0 0 0 0 0 0 0 0 0 9 0 0 11 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACG.......................................................... 20 0 1 6.00 6 0 0 0 1 3 0 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGTAA....................................................... 23 0 1 6.00 6 0 2 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAT......................................................................................... 23 1 1 6.00 6 3 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................ACTGAATGTATCCTGA.......................................................................................... 16 0 1 5.00 5 0 1 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGT......................................................... 21 0 1 5.00 5 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0
......................................................AAACGTATACTGAATGTATCCT............................................................................................ 22 0 1 5.00 5 1 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGCATGTATCCTGA.......................................................................................... 22 1 1 4.00 4 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATCTATCC............................................................................................. 19 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTTA.......................................................................................... 22 1 1 4.00 4 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCGG........................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCT............................................................................................ 20 1 1 4.00 4 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGC.......................................................................................... 22 1 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCC............................................................................................. 19 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................ATACTGAATGTATCCTGA.......................................................................................... 18 0 1 4.00 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0
................................................................TGAATGTATCCTGAGT........................................................................................ 16 0 3 3.33 10 0 0 0 0 0 0 0 0 0 5 0 0 5 0 0 0 0
........................................................ATGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGATTGTATCCTGA.......................................................................................... 22 1 1 3.00 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAG......................................................................................... 23 0 1 3.00 3 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATCTATCCTG........................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGT.......................................................................................... 22 1 1 3.00 3 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGT................................................................................................. 15 0 1 3.00 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAC......................................................................................... 22 1 1 3.00 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................AAACGTATACTGAATGTATCCTG........................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTAACCTGA.......................................................................................... 22 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATAC........................................................... 19 0 1 3.00 3 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATA............................................................ 18 0 1 3.00 3 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCCGA.......................................................................................... 22 1 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGAATCCTGA.......................................................................................... 22 1 1 2.00 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................ATACCTTCAGTATACGT......................................................... 17 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTACCCTGA.......................................................................................... 22 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAAGT...................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CACGTATACTGAATGTATCCTG........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAC........................................................................................ 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................CGTGGACGTATACTGAATGTATCCTG........................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATACTGA.......................................................................................... 22 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................AACGTATACTGAATGTATCCTG........................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAACT..................................................... 22 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACCGAATGTATCCTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGCATCCTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTAAATGTATCCTGA.......................................................................................... 22 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGACT........................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................GTATACTGAATGTATCCTGA.......................................................................................... 20 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCT............................................................................................ 19 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATTCTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GGTATACCTTCAGTATACG.......................................................... 19 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGGATCCTGA.......................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAAA........................................................................................ 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGACTGTATCCTGA.......................................................................................... 22 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTCA.......................................................................................... 22 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCGA........................................................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCCG........................................................................................... 21 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................CGTGGACGTATACTGAATGTATCCTGA.......................................................................................... 27 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAA........................................................................................ 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTTTCCTGA.......................................................................................... 22 1 1 2.00 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................GAATGTATCCTGAGT........................................................................................ 15 0 3 1.67 5 0 0 0 0 0 0 0 0 0 2 0 0 3 0 0 0 0
................................................................TGAATGTATCCTGAG......................................................................................... 15 0 3 1.67 5 0 0 0 0 0 0 0 0 0 3 0 0 2 0 0 0 0
........................................................ACGTATATTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATATATCCTTA.......................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAACTTATCCTGA.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGGATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGGATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATAATGAATGTATCCTGA.......................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATAATGAATGTATCATGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGGCATACCTTCAGTATACGTAAC...................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATTCTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACATA........................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCGTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATAATGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAAATTATCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAC......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATTTATCC............................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGCATGTATCCTGT.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACTTATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTCAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GCGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................ACATACTGAATGTATCCTGA.......................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATAATGAATGTTTCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACATATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAGGCT...................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................CGGTATATTTTCAGTATACGTA........................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................ATACCTTCAGTATACGTAA....................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGT............................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTTA.......................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGAATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTTTACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTG........................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................GGTATACCTTCAGTATACGTA........................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCTTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGACTGTCTCCTGAG......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGGATCCTGC.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTA................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAGGCG...................................................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................ACGTATGCTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TCTTGAATGTATCCTGAGTA....................................................................................... 20 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTTAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATTTATCCTGAAA........................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGGATGTATCCTGG.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ATACCTTCAGTATACGTAACA..................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAACGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AAACGTACACTGAATGTATCCT............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATGCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTGAAA........................................................................................ 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATCCGTAA....................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCGTA.......................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGCATGTATCCT............................................................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................AAACGTATACTGAATCTATCCT............................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACATATACTGAATGTATCCTGG.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGACA........................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACTTATACTGAATGTATCCTC........................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAT........................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGAATCCTGG.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTGATA........................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTCAATGTATCCTCA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGGATGTCTCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACCTTCAGTATACGTA........................................................ 17 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................CAGACGTATACTGAATGTATCCTGA.......................................................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAACGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCT............................................................................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGGATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................CGTATACTGAATTTATCCTGAA......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCC............................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACCTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTACCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATATATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATAATGAATGTCTCCTGC.......................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................AGGTATACTGAATGTATCCTGG.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTA........................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGTATGTATCCTTG.......................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATTCTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGCATACTGGATGTATCCTGC.......................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCTGT.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTGTCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGATT........................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTAAATGTATCCTGAC......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCGG........................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGGATACTGAATGTATACTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCATGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATCCTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGGT......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAGT........................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTACACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTTTACTG........................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGG.......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGGATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AAGTATACTGAATGTATACTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AATGTATCCTGAGTA....................................................................................... 15 1 10 0.90 9 0 0 0 0 0 0 0 0 0 3 0 0 6 0 0 0 0
..............................................................ACTGAATGTATCCTG........................................................................................... 15 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTGAAAA....................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTCTCCTGACTT....................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GAATGTATCCTGAGTA....................................................................................... 16 1 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
........................................................ACCTATACTGAATGTATTC............................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGAATGTATCCTGA.......................................................................................... 15 1 18 0.39 7 0 0 0 0 0 0 0 0 0 2 0 0 5 0 0 0 0
........................................................GCGTATACTGAATGTATC.............................................................................................. 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................ACGTACTGAATGTATCCTGA.......................................................................................... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TGAGTGTATCCTGAGT........................................................................................ 16 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................TGAATGTATCCTTAGT........................................................................................ 16 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................TTAATGTATCCTGAGT........................................................................................ 16 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................CTTAATGTATCCTGA.......................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................TGAATGTACCCTGAGTA....................................................................................... 17 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................TTGAATGTATCCTGAGTA....................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATTGA............................................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................GAATGTATCCTGAGTAC...................................................................................... 17 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................TGAATGTATCTTGAG......................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................GAATGTACCCTGAGTA....................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................TCTTGAATGTATCCTGA.......................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CTGTGCCGTATTAAAAGTCGTGAAAACCTATTACCGCTAAGACACGCTGGAGCATTTGCATATGACTTACATAGGACTCACATAGGATAGGCCATATGGAAGTCATATGCATTGTGCTCTATCGTGCTCGTTGCACCCTACACTTTGTGAAAATTATGTGAAATTATG

*****************************************.((((...(((((..((((((((((((.((((((.((..........)).)).)))).))))))))))))...)))))...)))).*****************************************
Read size # Mismatch Hit Count Total Norm Total O001

Testis

M053

female body

GSM343915

embryo

SRR553488

RT_0-2 hours eggs

SRR902009

testis

M024

male body
SRR553487

NRT_0-2 hours eggs

M025

embryo

SRR618934

dsim w501 ovaries

O002

Head

SRR553485

Chicharo_3 day-old ovaries

SRR553486

Makindu_3 day-old ovaries

M023

head

...................................................GCATTTGCATATGACTTACATAGG............................................................................................. 24 0 1 196.00 196 194 0 0 0 0 0 0 0 0 2 0 0 0
...................................................GCATTTGCATATGACTTACATAGGA............................................................................................ 25 0 1 142.00 142 142 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGCCATATGGAAGTCATATGCATT....................................................... 24 0 1 123.00 123 26 10 3 39 18 0 22 0 3 1 1 0 0
......................................................TTTGCATATGACTTACATAGGA............................................................................................ 22 0 1 109.00 109 107 1 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................ATGGAAGTCATATGCATT....................................................... 18 0 1 106.00 106 99 0 0 0 0 0 0 0 0 6 0 1 0
..............................................................................................TATGGAAGTCATATGCATT....................................................... 19 0 1 105.00 105 61 3 3 1 0 24 1 1 2 0 3 5 1
.............................................................................................ATATGGAAGTCATATGCATT....................................................... 20 0 1 104.00 104 84 8 5 0 1 2 0 2 0 2 0 0 0
...........................................................................................CCATATGGAAGTCATATGCATT....................................................... 22 0 1 74.00 74 4 24 27 2 1 7 4 5 0 0 0 0 0
............................................................................................CATATGGAAGTCATATGCATT....................................................... 21 0 1 48.00 48 5 30 6 1 0 4 0 0 1 0 1 0 0
..........................................................CATATGACTTACATAGGA............................................................................................ 18 0 1 38.00 38 38 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GCATATGACTTACATAGGA............................................................................................ 19 0 1 34.00 34 33 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................GCCATATGGAAGTCATATGCATT....................................................... 23 0 1 34.00 34 14 1 0 0 16 0 0 2 1 0 0 0 0
........................................................................................AGGCCATATGGAAGTCATATGCATT....................................................... 25 0 1 27.00 27 6 1 4 5 1 2 2 5 1 0 0 0 0
........................................................TGCATATGACTTACATAGGA............................................................................................ 20 0 1 20.00 20 20 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TTTGCATATGACTTACATAGG............................................................................................. 21 0 1 19.00 19 18 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................GCATATGACTTACATAGG............................................................................................. 18 0 1 15.00 15 15 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGGCCATATGGAAGTCATATGCATT....................................................... 25 1 1 14.00 14 0 0 0 2 6 1 2 0 1 0 2 0 0
........................................................TGCATATGACTTACATAGG............................................................................................. 19 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTGCATATGACTTACATAGG............................................................................................. 20 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTGCATATGACTTACATAGGA............................................................................................ 21 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGCCATATGGAAGTCATATGCAT........................................................ 23 0 1 8.00 8 4 1 0 1 1 0 0 0 1 0 0 0 0
..............................................................................................TATGGAAGTCATATGCAT........................................................ 18 0 1 8.00 8 6 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................GCCATATGGAAGTCATATGCAT........................................................ 22 0 1 7.00 7 4 2 0 0 1 0 0 0 0 0 0 0 0
.....................................................ATTTGCATATGACTTACATAGG............................................................................................. 22 0 1 7.00 7 5 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTGCTCTATCGTGCTCGTT.................................... 19 0 1 6.00 6 0 0 2 0 0 0 0 3 1 0 0 0 0
........................................................................................AGGCCATATGGAAGTCATATGCAT........................................................ 24 0 1 5.00 5 2 0 0 1 0 1 0 0 0 0 0 1 0
.........................................................................................TGCCATATGGAAGTCATATGCATT....................................................... 24 1 1 4.00 4 0 1 0 0 1 0 0 0 2 0 0 0 0
....................................................CATTTGCATATGACTTACATAGG............................................................................................. 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AATTTGCATATGACTTACATAG.............................................................................................. 22 1 1 3.00 3 0 1 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGCAT........................................................ 21 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................TACATAGGACTCACATAGGATA............................................................................... 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
........................................................................................GGGCCATATGGAAGTCATATGCATT....................................................... 25 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0
.............................................................................................ATATGGAAGTCATATGCAT........................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CATATGGAAGTCATATGCAT........................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGCCATAGGGAAGTCATATGCATT....................................................... 24 1 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0
.................................................................................................................GTGCTCTATCGTGCTCGTTG................................... 20 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0
.......................................................................................TAGGCCATATGGAAGTCATATGCATT....................................................... 26 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................TGCATATGACTTACATAG.............................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGCCATATGGAAGTTATATGCATT....................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................CATGGAAGTCATATGCATT....................................................... 19 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................TATGGGAGTCATATGCATT....................................................... 19 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................CAATATGGAAGTCATATGCATT....................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................TGGAAGTCATATGCATT....................................................... 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................TTGCCATATGGAAGTCATATGCATT....................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................CCTTAGGGAAGTCATATGCATT....................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................TCATATGGAAGTCATATGCATT....................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................TAGGCCATATGGAAGTCATATGCAT........................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CATATGGAAATCATATGCATT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TATGGAAGTCATATGCATTC...................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ACCATATGGAAGTCATATGCATT....................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................GTGCTCTATCGTGCTCGTTGC.................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................CGGCCATATGGAAGTCATATGCATT....................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................GGCCATATGGAAGTCATA............................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................CCATATGGAGGTCATATGCATT....................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................CATTTGCATATGACTTACATAGGA............................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGACTTACATAGGACTCACATAGGAT................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................AATATGGAAGTCATATGCATT....................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................TAAGGAAGTCATATGCATT....................................................... 19 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................ATTTGCATATGACTTACATAGGA............................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATATGTAAGTCATATGCATT....................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATCTGGCAGTCATATGCATT....................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................AATGGAAGTCATATGCATT....................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................CCATATGGAAGTCATATGAATT....................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................ATTTGCATATGACTTACATAG.............................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ACTTACATAGGACTCACATAGGATAG.............................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................GCCATATGGAAGTCATATGCA......................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................GGCCATATGGAATTCATATGCATT....................................................... 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................ACCATATGGAAGCCACATGCATT....................................................... 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................AGGCCATAGGGAAGTCATATGCATT....................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................TATTTGCATATGACTTACATA............................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................CATAGGGAAGTCATATGCATT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTATGGAAGTCATATGCATT....................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................AGGCCATATGGAAGTCATATGCATTG...................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................GCATTTGCATATGACTTAC.................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATGCGAAAGTCATATGCATT....................................................... 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTTTGGAAGTCATATGCATT....................................................... 21 3 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................GTCATATCCATTGTGCG.................................................. 17 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................AGGAATGGCCATATGG..................................................................... 16 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 3r:8574065-8574232 - dsi-mir-iab-4 Known_mirbase G--------ACACGG-------------------C----ATAATTT----TC-AGCAC-TTTT---GGAT--AATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TT--AATACACT-----------TTAATA--------C
droSec2 scaffold_12:1472194-1472362 - dse-mir-iab-4 Known_mirbase G--------ACACGG-------------------C----ATAATTT----TC-AGCAC-TTTT---GGAT--AATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AATACATC-----------TTAATA--------C
dm3 chr3R:12681947-12682115 + dme-mir-iab-4 Known_mirbase G--------ACGACG-------------------C----ATAATTT----TC-AGCAC-TTTT---GAAT--AATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAGAGCACTAACAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AAGACACC-----------TTAATA--------C
droEre2 scaffold_4770:8952366-8952534 - der-mir-iab-4 Known_mirbase G--------ACGACG-------------------T----ATAATTT----TC-AGCAC-TTTT---GGAT--TAAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AAGACTCT-----------ACAATA--------C
droYak3 3R:11708917-11709085 - dya-mir-iab-4 Known_mirbase G--------ACGACG-------------------C----GTAATTT----TC-AGCAC-TTTT---GGAC--TAAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AATACTGC-----------TTAATA--------C
droEug1 scf7180000409804:92878-93035 + A---------------------------------C----TTCATTT----TG-GTCAC-TTTC---GGAT--TATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG------A-------AACAGT------------T---------------------------------------T--A------CTTTAA---------AAAC--------C
droBia1 scf7180000299102:622743-622906 + A--------GCGGCG-------------------C----ATCTTTC----TC-GGCAC-TTTT---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------T--A------TTTTTG---------AAAA--------C
droTak1 scf7180000411269:86541-86713 + A--------GCGGCGCA-------TC--------C----T---TCT----TT-GGCAC-TTTT---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------T--T------CTTTTT---------AAAACTCGACGAA
droEle1 scf7180000486474:1729418-1729567 + --------------------------------------------------TC-GTCAC-TTTC---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------T--A------CTTTAAA--------AATA--------T
droRho1 scf7180000759657:23955-24125 + A--------GCGACG-------------------C----ATCCTGT----TT-GGCAC-TTTC---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------T--A------CTGTTAAAACTGTTGAA----------T
droFic1 scf7180000452523:122324-122489 + A--------GCGACA-------------------C----GTC--TT----TCAGTCAC-TTTCGCCGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------TT--------CC-----------TTAAAA--------C
droKik1 scf7180000302313:151140-151299 + T--------TT-TCGT------------------G----TCCTTTA----TA-AGCAC-TTGC---GGAT--GATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------GAA-A--------------------AAAA--------T
droAna3 scaffold_13340:7215149-7215301 - dan-mir-iab-4 Known_mirbase A--------C-----------------------------------------------A-TTAC---GGAG--GATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG------A-------AA-ACT------------T---------------------------------------A----ATATTCT---GA--------AAT-ATTTAAAAC
droBip1 scf7180000396708:1638832-1639003 + A--------GCACTA-------------------C----TATCTTA----CC-AGAAAATTAC---GATG--GATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG------A-------AA-ACT------------T---------------------------------------T--G------TTTTAGA--------AAT-ATTTCAAAC
dp5 2:17671712-17671899 + dps-mir-iab-4 Known_mirbase T--------CGACTG-------------------CACTCGTAATTTTCTTTC-AGCGG-TTAT---G-----TAGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACG------T--------------CGA----------ACTGA-------------AACCGAGCACTGTGATTTATTC---TTGCACT-----------T-------------T
droPer2 scaffold_0:11526518-11526705 + dpe-mir-iab-4 Known_mirbase T--------CGACTG-------------------CATTCGTAATTTTCTTTC-AGCGG-TTAT---G-----TAGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATG------T--------------CGA----------ACTGAATTTAAACGTGTAAACCG---------------------AGCACT-----------GTGATT--------T
droWil2 scf2_1100000004943:4905554-4905695 - dwi-mir-iab-4 Known_mirbase G--------T---------------------------------------------CAC-TTTC---C-------AGATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGTG----A-------AACACT------------T---------------------------------------TTT-A---TTCT---------------TT--------T
droVir3 scaffold_12855:414656-414830 - dvi-mir-iab-4 Known_mirbase G-------TGCGATGAAAACTGAGGTGTTTATAGC---------------GG-AGCAC-TTA-------T----TGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG------T-------GATATA------------T---------------------------------------TT--AGATTGCA-----------TTAAAA--------T
droMoj3 scaffold_6540:1943711-1943850 + dmo-mir-iab-4 Known_mirbase TTTTCAGGAGCGA-------------------------------------------------------AT----TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTG----A-------AA-ACT------------T---------------------------------------------------------------CAATA---------
droGri2 scaffold_14906:12815081-12815263 + dgr-mir-iab-4 Known_mirbase G--------ACACTC-------------------C----AAA---------G-GACAC-TCTT---GTA---------GAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTTTTGTATATATATAA-ATTTCGATAAATAATACACTG--------------------------------------AAAACACT-----------TTGTCA--------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
G--------ACACGG-------------------C----ATAATTT----TC-AGCAC-TTTT---GGAT--AATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TT--AATACACT-----------TTAATA--------CSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2213761.00376161987114013710338248221303341304386203
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211467.0046731823675227112736102405002
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................221205.002053319900000000000000
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................191137.0013703690392500100000000
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................20195.0095126123108513156401000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................23132.0032011900001330022010
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................18132.0032011604500006000000
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................22126.0026000051001101314000
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21120.0020000100000370000000
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................22113.001300500000330200000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................22112.001200000000270300000
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................22112.001200400000420002000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20111.001101180000010000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................24111.001100403200100100000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................2117.00700410000100100000
..........................................................................................................TGAATGTATCCTGAGTA............................................................................................................................................................................1736.6720000000911000000000
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2016.00600013100000001000
....................................................................................................................................CGGTATACCTTCAGTATACGTAA............................................................................................................................................2316.00600000000121101000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2316.00600310010010000000
........................................................................................................ACTGAATGTATCCTGA...............................................................................................................................................................................1615.00500000000113000000
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................2115.00500000000005000000
................................................................................................AAACGTATACTGAATGTATCCT.................................................................................................................................................................................2215.00500110000010200000
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................2214.00400000000130000000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1814.00400000000004000000
..........................................................................................................TGAATGTATCCTGAGT.............................................................................................................................................................................1633.331000000055000000000
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2313.00300002100000000000
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2213.00300000000011100000
..................................................................................................ACGTATACTGAATGT......................................................................................................................................................................................1513.00300000000003000000
...................................................................................................CGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2213.00300110000000100000
................................................................................................AAACGTATACTGAATGTATCCTG................................................................................................................................................................................2313.00300300000000000000
....................................................................................................................................CGGTATACCTTCAGTATAC................................................................................................................................................1913.00300111000000000000
....................................................................................................................................CGGTATACCTTCAGTATA.................................................................................................................................................1813.00300001200000000000
........................................................................................................................................ATACCTTCAGTATACGT..............................................................................................................................................1712.00200000000002000000
..................................................................................................ACGTATACTGAATGTATCCTGAAC.............................................................................................................................................................................2412.00200200000000000000
.................................................................................................AACGTATACTGAATGTATCCTG................................................................................................................................................................................2212.00200200000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2212.00200000000110000000
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2012.00200010000000100000
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1912.00200002000000000000
.....................................................................................................................................GGTATACCTTCAGTATACG...............................................................................................................................................1912.00200002000000000000
...................................................................................................CGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2312.00200200000000000000
..................................................................................................ACGTATACTGAATGTATCCGA................................................................................................................................................................................2112.00200000000020000000
..................................................................................................ACGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2412.00200200000000000000
...........................................................................................................GAATGTATCCTGAGT.............................................................................................................................................................................1531.67500000023000000000
..........................................................................................................TGAATGTATCCTGAG..............................................................................................................................................................................1531.67500000032000000000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2311.00100000000010000000
........................................................................................................................................ATACCTTCAGTATACGTAA............................................................................................................................................1911.00100000000001000000
....................................................................................................................................CGGTATACCTTCAGT....................................................................................................................................................1511.00100000000010000000
.....................................................................................................TATACTGAATGTATCCTG................................................................................................................................................................................1811.00100000000001000000
.....................................................................................................................................GGTATACCTTCAGTATACGTA.............................................................................................................................................2111.00100010000000000000
..................................................................................................ACGTATACTGAATGTA.....................................................................................................................................................................................1611.00100000000001000000
..................................................................................................ACGTATACTGAATGTATCCTGAGGCG...........................................................................................................................................................................2611.00100000000001000000
........................................................................................................................................ATACCTTCAGTATACGTAACA..........................................................................................................................................2111.00100000000100000000
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................2111.00100000000000100000
..................................................................................................ACGTATACTGAATGTATCCTGACA.............................................................................................................................................................................2411.00100100000000000000
.....................................................................................................TATACTGAATGTATCCTGATA.............................................................................................................................................................................2111.00100000000010000000
.........................................................................................................................................TACCTTCAGTATACGTA.............................................................................................................................................1711.00100000000001000000
..................................................................................................ACGTATACTGAATGTATCT..................................................................................................................................................................................1911.00100000000000001000
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1811.00100000100000000000
..................................................................................................ACGTATACTGAATGTATCCTA................................................................................................................................................................................2111.00100000000100000000
...................................................................................................CGTATACTGAATGTATCCTGGT..............................................................................................................................................................................2211.00100000001000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2411.00100010000000000000
...................................................................................................CGTATACTGAATGTATCCTGG...............................................................................................................................................................................2111.00100100000000000000
............................................................................................................AATGTATCCTGAGTA............................................................................................................................................................................15100.90900000036000000000
........................................................................................................ACTGAATGTATCCTG................................................................................................................................................................................1520.50100000000001000000
.....................................................................................................TATACTGAATGTATCCTGAAAA............................................................................................................................................................................2220.50100000000010000000
...........................................................................................................GAATGTATCCTGAGTA............................................................................................................................................................................1640.50200000002000000000
..................................................................................................ACGTATACTGAATGTATTGA.................................................................................................................................................................................2090.11100000000000001000
...........................................................................................................GAATGTATCCTGAGTAC...........................................................................................................................................................................17120.08100000001000000000
droSec2
G--------ACACGG-------------------C----ATAATTT----TC-AGCAC-TTTT---GGAT--AATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AATACATC-----------TTAATA--------CSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................221859.0085937834771
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211247.002472231230
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21157.005752050
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................20123.002316160
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20122.002222000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2319.0093060
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2219.0093060
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................2218.0087010
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................1916.0063030
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................2115.0050050
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2015.0054010
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2214.0043010
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................2114.0043010
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................2214.0041120
..................................................................................................ACGTATACTGAATGTATCCTT................................................................................................................................................................................2113.0033000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................1813.0030030
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2213.0033000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................2412.0021010
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2012.0021010
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1912.0022000
................................................................................................AAACGTATACTGAATGTATCCT.................................................................................................................................................................................2212.0020020
..................................................................................................ACGTATACTGAATGTATCCTC................................................................................................................................................................................2112.0022000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2311.0011000
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1911.0011000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2211.0011000
..................................................................................................ACGTATACTGAATGTATCCTGAAG.............................................................................................................................................................................2411.0010010
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2311.0011000
.................................................................................................AACGTATACTGAATGTATCCTG................................................................................................................................................................................2211.0011000
....................................................................................GTGCGACCTCGTAAACGTA................................................................................................................................................................................................1911.0010010
...................................................................................................CGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2311.0010010
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2211.0011000
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................2211.0011000
................................................................................................AAACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2411.0010010
...................................................................................................................................................................AGCACGAGCAACGTGGGATGTG------........................................................................................................2211.0010010
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2311.0010010
....................................................................................................................................CGGTATACCTTCAGTATACGTAA............................................................................................................................................2311.0011000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1811.0010010
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2211.0010010
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1911.0010010
.....................................................................................................................................GGTATACCTTCAGTATACGTA.............................................................................................................................................2111.0011000
........................................................................................................................................ATACCTTCAGTATACGTAACA..........................................................................................................................................2111.0010010
...................................................................................................CGTATACTGAATGTATCCTGG...............................................................................................................................................................................2111.0011000
dm3
G--------ACGACG-------------------C----ATAATTT----TC-AGCAC-TTTT---GAAT--AATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAGAGCACTAACAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AAGACACC-----------TTAATA--------CSizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................22115921.0015921000031232933724200000001205000000000010010014171702206153000096210512000000000000000000020012121919322773330910147331105116553611086746623448101027119859727142020003000010000000000000110018204774036410630040000000000002326016001143161240490000003621100004007000003200000000091339292722542091681114091241001110047521602000009003000001000000000000000540120153130000000001401943600524020000002020000000000000223000000011
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................231928.0092800000000000000000000000000000000000000000000000000000000441420570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000020000000000000200000000000000000000000000000000000003000000000000100000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211707.0070700000000231000000000010100000000006100002002210101201000292660000000000000000000000151789010010900301389525020000000263030200000000000100000000004110000001240003000000000004208006172204022000004200200000200000000000000000410211312376221120000000019260000000200600000000000000000000002121122100000000081811002000200000101000000000001000002000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAA............................................................................................................................................231701.00701000000156000100000000000000000000000000001000000000000001120000000000000000000000018814116138330035221160113214160300013117514115000000000000000000000000002000000000000000000000000000000010000000000000000000000000000000000000000000100110001000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................221578.0057800000023500000000000000000000000000000000000000000000000300000000000000000000000012914441121000103170215189449164300201018415031000000000000000000000001001000000010000000000000000200001140100000000010000000000000000000000000000000008300107000000001100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................241456.004560000000520000000000000000000000000000000000000000000000020000000000000000000000031263345105900014000000211221100200101421015000000000000000000000000101000000000000000000000000000000100000000000000100000000000000000000000000000004150002000000001100000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................201209.002090000000000000000000000000000000000700000001011000011000020000000000000000000000002018140003010010110212000000000030000100000000000000000000000030001010600000000000000010000011000008000000100000001000000000000000000031013108301314000000004400000009006000000000000000000000070126120000000001501002200100000000000000000000010100000000
.....................................................................................................................................GGTATACCTTCAGTATACGTAA............................................................................................................................................221154.0015400000004100000000000000000000000000000000000000000000000000000000000000000000000077733960000000000000160000000000910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................211126.00126000000000100000000000000000000000000000000000000000000003600000000000000000000000124846100011000011100300000000001340000000000000000000000000001400000000000000000000000000000000000000000001000000000000000000000000000101000020001000000007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................231107.00107000000010000000000000000000000000000000000000000000000000000000000000000000000000071826000001000001000200000000006005000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000003310112200003000000001100000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................221103.00103000000000000000000000000000000000000000000001000000000000000000000000000000000000125192210030010101001001100000000000000000000000000001000000001000001000000000000000000010100000002010000000000000000000000000000000000230000140000000000002200000000001000000000000000000000011004000000000001200000100000000000000000000000000100000000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................23199.0099000000000000000000000001000000000000000000000000000000000000000000000000000000000608110000020000010022000000000001000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000004100321802140000100032000000000000000000000000000000000000000000000000011000023000000000000000000000000000000000015
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................21185.0085000000000000000000000000000000000000001100100000000100006220000000000000000000000504710030900300200020000034000100000000000000000100000000000000000002000000000000000000000001000000000000010000010000000000000000000010000580000000000002200000000000000000000000000000000010001000000000000000000000001000000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGTAAC...........................................................................................................................................23175.00750000000200000000000000000000000000000000000000000000000000000000000000000000000002214141250000000000010000000000000100300000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................22155.00550000000010000000000000000000000000000000001000000100000000000000000000000000000003053500000100000000000000000000000000100000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATAC................................................................................................................................................19148.00480000000000000000000000000000000000000000000000000000000010000000000000000000000001099000000000010102400000000003000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................22142.0042000000001000000000000000000000000000000000000000000000000000000000000000000000000520500000000000010000000000000900000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000110000011001000000005100000000000000000000000000000000000000000000000002100002100000000000000000000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................22141.0041000000000000000000000000000000000000000000000000000000000000000000000000000000000003500000000100001051000000101120000000000000000000000000010100000001000000000000000000020001100005000000001000000000000000000000000000000040100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................22135.00350000000112100000000000000000000000000000000000000000000000000000000000000000000004021200000000000000010000000000500000000000000000000000000000000000000000000000000000100100000000020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................20132.0032000000000000000000000001000000000000000000000000000000001000000000000000000000000105100001100000000210100000000000000000000000001001000000000000020003000000000000000010000000000000000000000000000000000000000000000000000071000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGATC.............................................................................................................................................................................24131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGTA.............................................................................................................................................21129.002900000000000000000000000000000000000000000000000000000000000000000000000000000000011001200000000000000000000000000200000000000000000000000000000000000002000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................22127.00270000000000000000000000000000000000000000000000000000000091710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................22123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000003900000100000000000000000000400000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AACGTATACTGAATGTATCCTGA...............................................................................................................................................................................23123.0023000000001000000000000000000000000000000000000000000000000100000000000000000000000109900000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................20121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000105800000000000010000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................23119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000017000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAACT..........................................................................................................................................25118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000160100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................19117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000006010000000000010100000000000000000000000000000000200000000000000000000000000000000010000000000000000000000000000000000000000000000011001100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................18115.0015000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000100000010000000000000000000000000000000000000000020000000000000001003000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................24114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACAC.........................................................................................................................................23113.0013000000000100000000000000000000000000000000000000000000000000000000000000000000000230000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001120000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAA...........................................................................................................................................24112.0012000000001000000000000000000000000000000000000000000000000000000000000000000000000201300000100000002000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................23111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000002200001000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAACA..........................................................................................................................................25111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000700200000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GTATACCTTCAGTATACGTAAC...........................................................................................................................................22110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000200600000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000330000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1918.008000000000000000000000000000000000000000000000000000000000000000000000000000000000101200000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1818.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTG............................................................................................................................................................................2517.007000000000000000000000000000000000000000000000000000000001310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................2017.007000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000010000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTT................................................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100010001000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAACGTATACTGAATGTATCCT.................................................................................................................................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000010000000000000000000000000000000000000000000000020000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAC............................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2416.006000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................TACCTTCAGTATACGTAAC...........................................................................................................................................1916.006000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGTAAA...........................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTTC...............................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAT...........................................................................................................................................2415.005000000010000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTA.............................................................................................................................................1914.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2414.004000000010000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTGT...........................................................................................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2214.004000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTTT...............................................................................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGT..............................................................................................................................................2014.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAT............................................................................................................................................2313.003000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGTAACA..........................................................................................................................................2413.003000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTC.............................................................................................................................................2213.003000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGATA.............................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TACCTTCAGTATACGTAA............................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTAG...............................................................................................................................................................................2212.002000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTA................................................................................................................................................................................2112.002000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGCA..............................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................GTATACTGAATGTATCCTGAAC.............................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAAC.............................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
G--------ACGACG-------------------T----ATAATTT----TC-AGCAC-TTTT---GGAT--TAAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AAGACTCT-----------ACAATA--------CSizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2211839.0018391431324077520
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211645.006456181508310
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................211144.00144135801000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20156.005656000000
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................19134.003423100100
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................20131.003123402110
................................................................................................AAACGTATACTGAATGTATCCT.................................................................................................................................................................................22115.001521102000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................22110.00103502000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2318.0088000000
.......................................................................................................................................TATACCTTCAGTATACGTAACAC.........................................................................................................................................2318.0080800000
..................................................................................................ACGTATACTGAATGTATCCTT................................................................................................................................................................................2118.0087001000
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2218.0085300000
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2018.0088000000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................2118.0080800000
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2015.0055000000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2315.0054100000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2214.0043001000
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................2214.0044000000
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1913.0033000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................2412.0020200000
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1912.0022000000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1812.0021100000
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1912.0022000000
................................................................................................AAACGTATACTGAATGTATCC..................................................................................................................................................................................2112.0020200000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................1812.0020200000
........................................................................................................................................ATACCTTCAGTATACGTAACAC.........................................................................................................................................2212.0020200000
.....................................................................................................................................GGTATACCTTCAGTATACG...............................................................................................................................................1912.0022000000
................................................................................................AAACGTATACTGAATGTATCCTC................................................................................................................................................................................2311.0010001000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2311.0011000000
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2311.0011000000
.....................................................................................................TATACTGAATGTATCCTG................................................................................................................................................................................1811.0011000000
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................2111.0011000000
...................................................................................................CGTATACTGAATGTATCCTGACA.............................................................................................................................................................................2311.0010100000
.........................................................................................................................................TACCTTCAGTATACGTAACT..........................................................................................................................................2011.0011000000
...............................................................................................TAAACGTATACTGAATGTATCC..................................................................................................................................................................................2211.0010100000
................................................................................................AAACGTATACTGAATGTATCCC.................................................................................................................................................................................2211.0010100000
................................................................................................AAACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2411.0011000000
....................................................................................................................................CGGTATACCTTCAGTATA.................................................................................................................................................1811.0010000100
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2211.0011000000
....................................................................................................GTATACTGAATGTATCCTGAA..............................................................................................................................................................................2111.0011000000
..........................................................................................................................................ACCTTCAGTATACGTAACA..........................................................................................................................................1911.0010100000
.........................................................................................................................................TACCTTCAGTATACGTAAC...........................................................................................................................................1911.0010100000
........................................................................................................................................ATACCTTCAGTATACGTAAC...........................................................................................................................................2011.0011000000
...................................................................................................CGTATACTGAATGTATCCTGT...............................................................................................................................................................................2111.0011000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTA............................................................................................................................................................................2511.0011000000
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1811.0010100000
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................2211.0011000000
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................2111.0010001000
....................................................................................................GTATACTGAATGTATCCTGATA.............................................................................................................................................................................2211.0011000000
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2211.0011000000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2211.0010100000
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2211.0011000000
...................................................................................................................................CCGGTATACCTTCAGTATACGTAAC...........................................................................................................................................2511.0010100000
..................................................................................................ACGTATACTGAATGTATCCC.................................................................................................................................................................................2011.0010100000
..................................................................................................ACGTATACTGAATGTATCCTC................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................GATGTG------A-------AACACT------------T---------------------------------------TTT-T.................................1820.5010001000
..................................................................................................ACGTATACTGAATGTATCTG.................................................................................................................................................................................2020.5011000000
droYak3
G--------ACGACG-------------------C----GTAATTT----TC-AGCAC-TTTT---GGAC--TAAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------TTT-AATACTGC-----------TTAATA--------CSizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2214354.0043542282392113000030160
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................191496.004960249300000010
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211412.004120287108130101020
................................................................................................AAACGTATACTGAATGTATCCT.................................................................................................................................................................................22195.0095009410000000
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21179.00790443410000000
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................20175.007502238200020110
.......................................................................................................................................TATACCTTCAGTATACGTAACAC.........................................................................................................................................23165.0065006500000000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................18147.0047004510000010
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................21135.0035003410000000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................23135.0035023300000000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20129.0029027110000000
................................................................................................AAACGTATACTGAATGTATCCC.................................................................................................................................................................................22128.0028002800000000
................................................................................................AAACGTATACTGAATGTATCC..................................................................................................................................................................................21122.0022002200000000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................22121.0021002100000000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................23118.0018001620000000
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................22117.0017001160000000
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................22115.0015001410000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................24114.0014001400000000
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................22113.0013001200000010
.......................................................................................................................................TATACCTTCAGTATACGTAACC..........................................................................................................................................22111.0011001100000000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................23110.001001810000000
..................................................................................................ACGTATACTGAATGTATCCC.................................................................................................................................................................................20110.0010001000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................2219.00903510000000
...................................................................................................CGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2218.00800800000000
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................2218.00800610000010
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................2118.00802420000000
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2016.00603300000000
..................................................................................................ACGTATACTGAATGTA.....................................................................................................................................................................................1616.00600000000060
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2016.00604200000000
...................................................................................................CGTATACTGAATGTATCCTGACC.............................................................................................................................................................................2315.00500500000000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2215.00521200000000
..................................................................................................ACGTATACTGAATGT......................................................................................................................................................................................1513.00300000000030
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2213.00302100000000
................................................................................................AAACGTATACTGAATGTATCCTG................................................................................................................................................................................2313.00300300000000
..................................................................................................ACGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2413.00300210000000
..................................................................................................ACGTATACTGAATGTATCCTT................................................................................................................................................................................2112.00201100000000
.................................................................................................AACGTATACTGAATGTATCCTG................................................................................................................................................................................2212.00200200000000
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1812.00200200000000
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1912.00201100000000
.......................................................................................................................................TATACCTTCAGTATACGTAACACT........................................................................................................................................2412.00200200000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAACT..........................................................................................................................................2512.00200200000000
..................................................................................................ACGTATACTGAATGTATCCTA................................................................................................................................................................................2112.00200200000000
...................................................................................................CGTATACTGAATGTATCCTGATA.............................................................................................................................................................................2311.00100100000000
.....................................................................................................TATACTGAATGTATCCTGAA..............................................................................................................................................................................2011.00100100000000
...............................................................................................TAAACGTATACTGAATGTATCC..................................................................................................................................................................................2211.00100100000000
..................................................................................................ACGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2411.00100100000000
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1911.00101000000000
................................................................................................AAACGTATACTGAATGTATC...................................................................................................................................................................................2011.00100100000000
.................................................................................................AACGTATACTGAATGTATCCT.................................................................................................................................................................................2111.00100100000000
....................................................................................................GTATACTGAATGTATCCTGAG..............................................................................................................................................................................2111.00101000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTGTATC........................................................................................................................................................................2911.00100100000000
..................................................................................................ACGTATACTGAATGTATCCTC................................................................................................................................................................................2111.00100100000000
..................................................................................................ACGTATACTGAATGTATCT..................................................................................................................................................................................1911.00100100000000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1811.00100100000000
........................................................................................................................................ATACCTTCAGTATACGTAACAC.........................................................................................................................................2211.00100100000000
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1911.00101000000000
...................................................................................................CGTATACTGAATGTATCCTGACA.............................................................................................................................................................................2311.00101000000000
......................................................................................................ATACTGAATGTATCCTGAGTGTATCCT......................................................................................................................................................................2711.00100100000000
..................................................................................................ACGTATACTGAATGTATCCTGAGGCC...........................................................................................................................................................................2611.00100100000000
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2311.00100100000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAC............................................................................................................................................2311.00100100000000
...................................................................................................CGTATACTGAATGTATCCTGTT..............................................................................................................................................................................2211.00100100000000
.....................................................................................................TATACTGAATGTATCCTG................................................................................................................................................................................1811.00101000000000
.......................................................................................................TACTGAATGTATCCTGAT..............................................................................................................................................................................1811.00100100000000
....................................................................................................GTATACTGAATGTATCCTGATC.............................................................................................................................................................................2211.00100100000000
...................................................................................................CGTATACTGAATGTATCCTGAGA.............................................................................................................................................................................2311.00100100000000
................................................................................................AAACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2411.00100100000000
droEug1
A---------------------------------C----TTCATTT----TG-GTCAC-TTTC---GGAT--TATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG------A-------AACAGT------------T---------------------------------------T--A------CTTTAA---------AAAC--------CSizeHit CountTotal NormTotal
No Reads
droBia1
A--------GCGGCG-------------------C----ATCTTTC----TC-GGCAC-TTTT---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------T--A------TTTTTG---------AAAA--------CSizeHit CountTotal NormTotal
No Reads
droTak1
A--------GCGGCGCA-------TC--------C----T---TCT----TT-GGCAC-TTTT---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG------A-------AACACT------------T---------------------------------------T--T------CTTTTT---------AAAACTCGACGAASizeHit CountTotal NormTotal
No Reads
droEle1
--------------------------------------------------TC-GTCAC-TTTC---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------T--A------CTTTAAA--------AATA--------TSizeHit CountTotal NormTotal
No Reads
droRho1
A--------GCGACG-------------------C----ATCCTGT----TT-GGCAC-TTTC---GGAT--TATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------T--A------CTGTTAAAACTGTTGAA----------TSizeHit CountTotal NormTotal
No Reads
droFic1
A--------GCGACA-------------------C----GTC--TT----TCAGTCAC-TTTCGCCGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------TT--------CC-----------TTAAAA--------CSizeHit CountTotal NormTotal
No Reads
droKik1
T--------TT-TCGT------------------G----TCCTTTA----TA-AGCAC-TTGC---GGAT--GATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG------A-------AACACT------------T---------------------------------------GAA-A--------------------AAAA--------TSizeHit CountTotal NormTotal
No Reads
droAna3
A--------C-----------------------------------------------A-TTAC---GGAG--GATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG------A-------AA-ACT------------T---------------------------------------A----ATATTCT---GA--------AAT-ATTTAAAACSizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................221744.007446369114210
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211507.0050749933002
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21164.00646310000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20148.00484800000
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................20135.00352851001
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................19132.00323290000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................21112.00120120000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2219.009090000
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2217.007600100
.......................................................................................................................................TATACCTTCAGTATACGTAACC..........................................................................................................................................2215.005050000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................2215.005041000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................1815.005050000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2314.004310000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2314.004400000
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1914.004400000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................2413.003030000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2213.003300000
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1913.003300000
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................2212.002101000
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................2212.002110000
...................................................................................................CGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2211.001010000
..................................................................................................ACGTATACTGAATGTATCCTGAGG.............................................................................................................................................................................2411.001100000
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1811.001010000
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1911.001100000
..................................................................................................ACGTATACTGAATGTATCCC.................................................................................................................................................................................2011.001010000
..................................................................................................ACGTATACTGAATGTATCCTA................................................................................................................................................................................2111.001100000
...................................................................................................CGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2311.001100000
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2211.001010000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2311.001010000
..................................................................................................ACGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2411.001100000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1811.001100000
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2311.001100000
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2211.001100000
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................2111.001010000
....................................................................................................................................CGGTATACCTTCAGTATACGTAACT..........................................................................................................................................2511.001010000
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2011.001100000
....................................................................................................GTATACTGAATGTATCCTGATG.............................................................................................................................................................................2211.001100000
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2211.001010000
..................................................................................................ACGTATACTGAATGTATCCTGACA.............................................................................................................................................................................2411.001100000
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................2130.331100000
droBip1
A--------GCACTA-------------------C----TATCTTA----CC-AGAAAATTAC---GATG--GATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG------A-------AA-ACT------------T---------------------------------------T--G------TTTTAGA--------AAT-ATTTCAAACSizeHit CountTotal NormTotal
No Reads
dp5
T--------CGACTG-------------------CACTCGTAATTTTCTTTC-AGCGG-TTAT---G-----TAGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACG------T--------------CGA----------ACTGA-------------AACCGAGCACTGTGATTTATTC---TTGCACT-----------T-------------TSizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2212365.002365193167532505029199272
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211718.0071816503701411158
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21190.009008150300010
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................19189.008901861100000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20160.006006000000000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................21136.003603311100000
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................20133.003302140800000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................24131.003102271100000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................22121.002105110500000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................22119.001904150000000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................23118.00180130100481
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................22115.00150700500030
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................18112.001200100200000
.......................................................................................................................................TATACCTTCAGTATACGTAACC..........................................................................................................................................2219.0090180000000
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1919.0090900000000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2318.0080110100230
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2217.0070110500000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2216.0060120300000
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2015.0050400100000
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................2215.0050230000000
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................2114.0040210001000
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2014.0040400000000
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................2214.0040400000000
........................................................................................................................................ATACCTTCAGTATACGTAAC...........................................................................................................................................2013.0030120000000
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2213.0030100200000
...................................................................................................CGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2213.0030210000000
.....................................................................................................TATACTGAATGTATCCTG................................................................................................................................................................................1812.0020100000001
....................................................................................................................................CGGTATACCTTCAGTATACGTAACT..........................................................................................................................................2512.0020020000000
..................................................................................................ACGTATACTGAATGTATCCC.................................................................................................................................................................................2012.0020020000000
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1912.0020100100000
.......................................................................................................................................TATACCTTCAGTATACGTAACAC.........................................................................................................................................2312.0020020000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAA............................................................................................................................................2312.0020000100010
.....................................................................................................................................GGTATACCTTCAGTATAC................................................................................................................................................1812.0020200000000
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1912.0020200000000
....................................................................................................GTATACTGAATGTATCCTGAC..............................................................................................................................................................................2112.0020020000000
....................................................................................................................................CGGTATACCTTCAGTATAC................................................................................................................................................1911.0010100000000
........................................................................................................................................ATACCTTCAGTATACGTAACA..........................................................................................................................................2111.0010100000000
..................................................................................................ACGTATACTGAATGTATCCTGTT..............................................................................................................................................................................2311.0010100000000
..................................................................................................ACGTATACTGAATGTATCCG.................................................................................................................................................................................2011.0010010000000
...................................................................................................CGTATACTGAATGTATCCC.................................................................................................................................................................................1911.0010010000000
....................................................................................................GTATACTGAATGTATCCTGAA..............................................................................................................................................................................2111.0010010000000
.................................................................................................TACGTATACTGAATGTATCCTG................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................TATACCTTCAGTATACGTAAGC..........................................................................................................................................2211.0010010000000
.........................................................................................................................................TACCTTCAGTATACGTAACACGA.......................................................................................................................................2311.0010010000000
...................................................................................................CGTATACTGAATGTATCCTGAGA.............................................................................................................................................................................2311.0010100000000
.......................................................................................................................................TATACCTTCAGTATACGTAA............................................................................................................................................2011.0010100000000
.....................................................................................................................................GGTATACCTTCAGTATACGTAAC...........................................................................................................................................2311.0010100000000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2311.0010010000000
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1811.0010010000000
..................................................................................................ACGTATACTGAATGTATCCTGACA.............................................................................................................................................................................2411.0010000000001
..................................................................................................ACGTATACTGAATGTATCCTGGT..............................................................................................................................................................................2311.0010100000000
....................................................................................................GTATACTGAATGTATCCTGAAC.............................................................................................................................................................................2211.0010000000001
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2311.0010100000000
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2211.0010100000000
...................................................................................................CGTATACTGAATGTATCCTGACC.............................................................................................................................................................................2311.0010010000000
...................................................................................................CGTATACTGAATGTATCCTGATA.............................................................................................................................................................................2311.0010010000000
....................................................................................................................................CGGTATACCTTCAGTATACGC..............................................................................................................................................2111.0010001000000
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................2130.6720010000010
..................................................................................................ACGTATACTGAATGTATCCTAT...............................................................................................................................................................................2220.5010010000000
droPer2
T--------CGACTG-------------------CATTCGTAATTTTCTTTC-AGCGG-TTAT---G-----TAGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATG------T--------------CGA----------ACTGAATTTAAACGTGTAAACCG---------------------AGCACT-----------GTGATT--------TSizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................221266.002669112846010
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211115.0011518915100
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21110.0010280000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2219.009810000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................2018.008080000
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................1916.006501000
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2215.005500000
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................2015.005032000
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2213.003210000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................1812.002110000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................2112.002020000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2312.002101000
...................................................................................................CGTATACTGAATGTATCCTGG...............................................................................................................................................................................2112.002200000
....................................................................................................GTATACTGAATGTATCCTGAT..............................................................................................................................................................................2111.001010000
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2011.001010000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1811.001010000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................2211.001010000
.................................................................................................TACGTATACTGAATGTATCCTG................................................................................................................................................................................2211.001100000
....................................................................................................GTATACTGAATGTATCCTT................................................................................................................................................................................1911.001010000
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2211.001010000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2211.001010000
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2011.001010000
........................................................................................................................................ATACCTTCAGTATACGTAAC...........................................................................................................................................2011.001001000
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2311.001010000
...................................................................................................CGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2211.001010000
droWil2
G--------T---------------------------------------------CAC-TTTC---C-------AGATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGTG----A-------AACACT------------T---------------------------------------TTT-A---TTCT---------------TT--------TSizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................221693.00693135803331
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211361.0036123120470
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21142.0042036150
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................20135.00350200141
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20126.0026026000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................22118.0018030150
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2219.00904050
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................2116.00600060
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2014.00412010
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................2213.00302010
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2313.00301020
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2213.00300030
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2213.00303000
.................................................................................................TACGTATACTGAATGTATCCT.................................................................................................................................................................................2112.00200020
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2212.00201010
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1912.00202000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................2112.00200020
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2012.00201010
..................................................................................................ACGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2412.00201010
....................................................................................................................................CGGTATACCTTCAGTATACGTAA............................................................................................................................................2312.00200020
.....................................................................................................TATACTGAATGTATCCTGAGTG............................................................................................................................................................................2212.00200020
..................................................................................................ACGTATACTGAATGTATCCTGAGTGT...........................................................................................................................................................................2612.00200020
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................1912.00201010
....................................................................................................GTATACTGAATGTATCCTGATA.............................................................................................................................................................................2211.00101000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................2311.00101000
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2211.00101000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................1811.00100010
...............................................................................................TATACGTATACTGAATGTATCC..................................................................................................................................................................................2211.00100010
........................................................................................................................................ATACCTTCAGTATACGTAAC...........................................................................................................................................2011.00101000
.....................................................................................................TATACTGAATGTATCCTG................................................................................................................................................................................1811.00101000
..................................................................................................ACGTATACTGAATGTATCCTGAGTG............................................................................................................................................................................2511.00100010
.................................................................................................TACGTATACTGAATGTATC...................................................................................................................................................................................1911.00100010
..................................................................................................ACGTATACTGAATGTATCCTC................................................................................................................................................................................2111.00100010
..................................................................................................ACGTATACTGAATGTATCCTT................................................................................................................................................................................2111.00100010
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................2111.00101000
..........................................................................AGATGAATCTGTGCAACTTCGT.......................................................................................................................................................................................................2211.00100010
.......................................................................................................................................TATACCTTCAGTATACGTAA............................................................................................................................................2011.00100010
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1811.00101000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................2411.00101000
droVir3
G-------TGCGATGAAAACTGAGGTGTTTATAGC---------------GG-AGCAC-TTA-------T----TGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG------T-------GATATA------------T---------------------------------------TT--AGATTGCA-----------TTAAAA--------TSizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2211928.00192811342127026311010003115817920153043115503613663367950411831500063810614132824131393734318000709716412949107341116151662
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211816.008165140314020010000016124161374822195966126165406110104000002021021070001610001200172014010710011
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................201165.00165003320000000000792890188023149572501100041000000000000000000010000400015011200000
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................22186.0086008200100000000002100030003330531900001002000000000000010010000000000000000100000
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21176.007600388000000000000022000101010811400011001000000000010000000000000000000000201011
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................19174.007420543000000000000020200000000000100000000000000001042020100400000000010103000000
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20154.005400470000000000000000200100000111000000000000000000000000000000000000001000000000
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................22133.00331034000000000000000000100001100000100000000100003103110000200000100002000113010
..................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATC...................................................................................................................................................................34124.00240000000000000000000000000000000000000000000332303033000100300000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................21124.00240040000000000001101003600100301000000010000000000000000000000000100000001000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................24122.00220017000000000000020100000000000000152000000100001010000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................20122.002200210000000000000010000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................23121.00210015000000000000000000000111101100000000000000000010001000200004000000100000000
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................23118.00180001000000000000000000000010100000000000000000110001011000000010200010202200000
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................21115.00150003000000000000000000000000000000000000000000000001002000100000000102011300000
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................18113.00131112000000000000010100001100000100000000000000000000000000100001000010000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................22112.00120050000000000000000000000000000000100000000001000000010100100000200000000000000
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................22110.00100014000000000000000000000000100000000000000000000002010000100000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................2218.0080013000000000000000000000000000000000000000000000100000000000000300000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAACT..........................................................................................................................................2517.0070001000000000000010000000000000000000000000000001000011000200000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACC..........................................................................................................................................2217.0070005000000000000000000000000000100000000000000000000000000000001000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGTC..............................................................................................................................................................................2316.0060000000000000000000000000000010301000001000000000000000000000000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................2116.0060014000000000000000000000001000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTT................................................................................................................................................................................2116.0060030000000000000020001000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATCC..................................................................................................................................................................3516.0060000000000000000000000000000000000000000000121000000010000100000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................2216.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTC................................................................................................................................................................................2115.0050010000000000000000000000000300100000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2215.0050001000000000000000000000000000000001000000000000010001000000000000010000000000
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2014.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................2214.0043000000000000000000000000000000000000000000000000001000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000100000000010101000000
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1914.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAA............................................................................................................................................2314.0040000000000000010000000000010000000000000000000000000001000000001000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGATCT............................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000030000000000
...................................................................................................CGTATACTGAATGTATCCTGATA.............................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000300000
...................................................................................................CGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2313.0030000000000000000000000000000100000000000000000000010000000000000000000100000000
...................................................................................................CGTATACTGAATGTATCCTGACA.............................................................................................................................................................................2313.0030002000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGACC.............................................................................................................................................................................2413.0030001000000000000000000000000100000000000000000000000000000100000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAA............................................................................................................................................2013.0030000000000000000000000000000000200000001000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGATC.............................................................................................................................................................................2413.0030000000000000000000000000000100100000000000000000000000010000000000000000000000
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGATC.............................................................................................................................................................................2313.0030001000000000000000000000010010000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCT......................................................................................................................................................................3113.0030000000000000000000000000000000000000000000000100002000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGTAAC...........................................................................................................................................2312.0020011000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAAC.............................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000020000000000
..................................................................................................ACGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2412.0020010000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000100000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATCT..................................................................................................................................................................3511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................TATACCTTCAGTATACGTAACG..........................................................................................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TACCTTCAGTATACGTAAC...........................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................ACTGAATGTATCCTGA...............................................................................................................................................................................1611.0010000000000000000000000000000000000000000000000000000000010000000000000000000000
...................................................................................................CGTATACTGAATGTATC...................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000100000000000000
....................................................................................................GTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2211.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGTA.............................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGTT..............................................................................................................................................................................2311.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2211.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATACCTTCAGTATACGTAAC...........................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAT............................................................................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GGTATACCTTCAGTATACGT..............................................................................................................................................2011.0010000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGAGC.............................................................................................................................................................................2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGAGTGTATCCTATT...................................................................................................................................................................3411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACT...............................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTT.............................................................................................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTGATA.............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001
....................................................................................................GTATACTGAATGTATCCTGAAC.............................................................................................................................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATAC................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ACGTATACTGAATGTATCCTA................................................................................................................................................................................2111.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGATAA............................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CGGTATACCTTCAGTATACGTAACC..........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................TCCGGTATACCTTCAGTATACGTAAC...........................................................................................................................................2611.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CGTATACTGAATGTATCCTGT...............................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................TATACTGAATGTATCC..................................................................................................................................................................................1611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................TATACTGAATGTATCCTGAA..............................................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TATACTGAATGTATCCTGAAAA............................................................................................................................................................................2230.6720000000000000000000000000000000000000000000000000000000000100000000000000001000
.....................................................................................................TATACTGAATGTATCCTGTT..............................................................................................................................................................................2020.5010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TTTTCAGGAGCGA-------------------------------------------------------AT----TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTG----A-------AA-ACT------------T---------------------------------------------------------------CAATA---------SizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................22113359.001335968019701124810
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................211937.0093756522003500
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................191784.0078460007780
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................211170.00170671001020
....................................................................................................................................CGGTATACCTTCAGTATACGTAAC...........................................................................................................................................241147.0014702001450
.......................................................................................................................................TATACCTTCAGTATACGTAACT..........................................................................................................................................221137.0013714001320
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................201125.0012540700780
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................221124.0012448001120
..................................................................................................ACGTATACTGAATGTATC...................................................................................................................................................................................181108.0010810001070
..................................................................................................ACGTATACTGAATGTATCCTGAA..............................................................................................................................................................................231104.0010420001020
.......................................................................................................................................TATACCTTCAGTATACGTAAC...........................................................................................................................................21182.00820200800
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................23181.00812300760
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................20170.00707000000
..................................................................................................ACGTATACTGAATGTATCCTGAC..............................................................................................................................................................................23168.00680000680
...................................................................................................CGTATACTGAATGTATCCTGAC..............................................................................................................................................................................22167.00670200650
...................................................................................................CGTATACTGAATGTATCCTGAA..............................................................................................................................................................................22165.00653400580
..................................................................................................ACGTATACTGAATGTATCCTGC...............................................................................................................................................................................22141.00411100390
.......................................................................................................................................TATACCTTCAGTATACGTAACC..........................................................................................................................................22134.00340000340
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................22132.00325300240
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................22129.00295100230
..................................................................................................ACGTATACTGAATGTATCCC.................................................................................................................................................................................20124.00240000240
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................20122.00225100160
..................................................................................................ACGTATACTGAATGTATCCTGG...............................................................................................................................................................................22118.00182100150
....................................................................................................................................CGGTATACCTTCAGTATACGTAACT..........................................................................................................................................25114.00140000140
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................21113.00130000130
....................................................................................................................................CGGTATACCTTCAGTATACGT..............................................................................................................................................21111.0011230060
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................20111.00111100000
...................................................................................................CGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................23110.00100000100
...................................................................................................CGTATACTGAATGTATCCTGACC.............................................................................................................................................................................23110.00100000100
....................................................................................................GTATACTGAATGTATCCTG................................................................................................................................................................................1919.009800010
...................................................................................................CGTATACTGAATGTATCC..................................................................................................................................................................................1819.009100080
......................................................................................................ATACTGAATGTATCCTGA...............................................................................................................................................................................1819.009000090
..................................................................................................ACGTATACTGAATGTATCCTGATC.............................................................................................................................................................................2418.008000080
....................................................................................................................................CGGTATACCTTCAGTATACGTA.............................................................................................................................................2218.008200060
.....................................................................................................TATACTGAATGTATCCTGA...............................................................................................................................................................................1917.007300040
....................................................................................................................................CGGTATACCTTCAGTATACGTAACC..........................................................................................................................................2516.006000060
.......................................................................................................................................TATACCTTCAGTATACGTAACAC.........................................................................................................................................2315.005010040
..................................................................................................ACGTATACTGAATGTATCCTT................................................................................................................................................................................2115.005200030
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1914.004400000
...............................................................................................TATACGTATACTGAATGTATCC..................................................................................................................................................................................2214.004100030
................................................................................................ATACGTATACTGAATGTATCCT.................................................................................................................................................................................2214.004000040
.....................................................................................................................................GGTATACCTTCAGTATACGTAAC...........................................................................................................................................2314.004000040
...................................................................................................CGTATACTGAATGTATCCTGTT..............................................................................................................................................................................2214.004000040
........................................................................................................................................ATACCTTCAGTATACGTAAC...........................................................................................................................................2014.004000040
..................................................................................................ACGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2314.004000040
..................................................................................................ACGTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2414.004000040
........................................................................................................................................ATACCTTCAGTATACGTAACAC.........................................................................................................................................2213.003000030
....................................................................................................GTATACTGAATGTATCCTGAA..............................................................................................................................................................................2113.003000030
...................................................................................................CGTATACTGAATGTATCCTGATC.............................................................................................................................................................................2313.003000030
..................................................................................................ACGTATACTGAATGTATCCTGAGT.............................................................................................................................................................................2413.003000030
......................................................................................................................................GTATACCTTCAGTATACGTAAC...........................................................................................................................................2213.003100020
....................................................................................................GTATACTGAATGTATCCTGAC..............................................................................................................................................................................2113.003100020
..................................................................................................ACGTATACTGAATGTATCCTGATA.............................................................................................................................................................................2413.003000030
..................................................................................................ACGTATACTGAATGTATCCTGACC.............................................................................................................................................................................2413.003000030
....................................................................................................GTATACTGAATGTATCCTGAAA.............................................................................................................................................................................2213.003000030
.................................................................................................TACGTATACTGAATGTATCCTG................................................................................................................................................................................2213.003110010
...................................................................................................CGTATACTGAATGTATCCTGAG..............................................................................................................................................................................2213.003010020
....................................................................................................................................CGGTATACCTTCAGTATACGC..............................................................................................................................................2112.002000020
..................................................................................................ACGTATACTGAATGTATCCTC................................................................................................................................................................................2112.002100010
........................................................................................................................................ATACCTTCAGTATACGTAACT..........................................................................................................................................2112.002200000
.................................................................................................TACGTATACTGAATGTATCCTGA...............................................................................................................................................................................2312.002200000
...................................................................................................CGTATACTGAATGTATCCTGATA.............................................................................................................................................................................2312.002000020
...................................................................................................CGTATACTGAATGTATCCTGACA.............................................................................................................................................................................2312.002000020
........................................................................................................................................ATACCTTCAGTATACGTAACA..........................................................................................................................................2112.002100010
....................................................................................................................................CGGTATACCTTCAGTATACGTAC............................................................................................................................................2312.002000020
....................................................................................................................................CGGTATACCTTCAGTATACGTC.............................................................................................................................................2212.002100010
....................................................................................................................................CGGTATACCTTCAGTATACGTAA............................................................................................................................................2312.002000020
....................................................................................................GTATACTGAATGTATCCTGACC.............................................................................................................................................................................2212.002000020
....................................................................................................GTATACTGAATGTATCCTGAAAC............................................................................................................................................................................2311.001000010
....................................................................AT----TGTTGAGCCTGTGCAACTT..........................................................................................................................................................................................................2111.001000010
.....................................................................................................................................GGTATACCTTCAGTATAC................................................................................................................................................1811.001100000
..................................................................................................................................TCCGGTATACCTTCAGTATACG...............................................................................................................................................2211.001010000
..................................................................................................ACGTATACTGAATGTATCCTGAAG.............................................................................................................................................................................2411.001000010
...............................................................................................................................CTATCCGGTATACCTTCAGTATACGTAAC...........................................................................................................................................2911.001000010
....................................................................................................GTATACTGAATGTATCCTGAGC.............................................................................................................................................................................2211.001000010
....................................................................................................GTATACTGAATGTATCCTGAAC.............................................................................................................................................................................2211.001000010
....................................................................................................GTATACTGAATGTATCCTGAGTT............................................................................................................................................................................2311.001000010
................................................................................................ATACGTATACTGAATGTATCC..................................................................................................................................................................................2111.001000010
droGri2
G--------ACACTC-------------------C----AAA---------G-GACAC-TCTT---GTA---------GAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTTTTGTATATATATAA-ATTTCGATAAATAATACACTG--------------------------------------AAAACACT-----------TTGTCA--------CSizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
..................................................................................................ACGTATACTGAATGTATCCTGA...............................................................................................................................................................................221145.001451450
..................................................................................................ACGTATACTGAATGTATCCTG................................................................................................................................................................................21134.0034340
...................................................................................................CGTATACTGAATGTATCCTGA...............................................................................................................................................................................21113.0013130
...................................................................................................CGTATACTGAATGTATCCTG................................................................................................................................................................................2016.00660
...................................................................................................CGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2215.00550
..................................................................................................ACGTATACTGAATGTATCCT.................................................................................................................................................................................2015.00550
....................................................................................................................................CGGTATACCTTCAGTATACG...............................................................................................................................................2012.00220
.......................................................................................................................................TATACCTTCAGTATACGTAACA..........................................................................................................................................2211.00110
.....................................................................................................................................GGTATACCTTCAGTATACGTAAC...........................................................................................................................................2311.00110
..................................................................................................ACGTATACTGAATGTATCCTGT...............................................................................................................................................................................2211.00110
...................................................................................................CGTATACTGAATGTATCCT.................................................................................................................................................................................1911.00110
..................................................................................................ACGTATACTGAATGTATCCTGAGTGA...........................................................................................................................................................................2611.00110
....................................................................................................GTATACTGAATGTATCCTGA...............................................................................................................................................................................2011.00110
..................................................................................................ACGTATACTGAATGTATCCTGAT..............................................................................................................................................................................2311.00110
..................................................................................................ACGTATACTGAATGTATCC..................................................................................................................................................................................1911.00110
.....................................................................................................TATACTGAATGTATCCTGAAA.............................................................................................................................................................................2120.50110

Generated: 10/20/2015 at 10:30 PM