ID:

dsi-mir-980

 Coordinate:

x:113245-113347 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.4 -31.1 -31.0

Flybase annnotation

utr3 [utr3_minus_9616]

No Repeatable elements found

Sense Strand Reads

ATCCCTAAAACATTTTTTTTTTTTGTTAAATTTTCCGCGTGTGAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAATAATATATTTTTTATTTTTATTTTAAGAAATACTGTTTACCATG

***************************************************....((((((((((.((((((((((..(((..(((((((...................))))))))))..)))))))))).)))))))))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934

dsim w501 ovaries

 GSM343915

embryo

 M023

head

 M053

female body

 O002

Head

 M024

male body		 M025

embryo

 SRR553488

RT_0-2 hours eggs

 SRR553487

NRT_0-2 hours eggs

 O001

Testis

 SRR553485

Chicharo_3 day-old ovaries

 SRR902009

testis

 SRR902008

ovaries

 SRR553486

Makindu_3 day-old ovaries

 SRR1275483

Male prepupae
...............................................................................................................TAGCTGCCTTGTGAAGGGCTT....................................................................... 21 0 1 1324.00 1324 407 497 170 177 6 46 15 1 1 0 4 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTA...................................................................... 22 0 1 285.00 285 105 67 8 18 27 1 5 30 15 4 3 1 0 1 0
..................................................................AGTTTTTCATTTGGCGTGGCTAGC................................................................................................................. 24 0 1 85.00 85 0 43 15 1 0 3 21 0 1 0 0 1 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCT........................................................................ 20 0 1 57.00 57 17 0 17 14 6 1 0 1 0 0 0 0 0 1 0
...............................................................................................................TAGCTGCCTTGTGAAGGGC......................................................................... 19 0 1 57.00 57 13 0 9 0 28 2 0 0 0 5 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGG.......................................................................... 18 0 1 40.00 40 25 0 0 0 14 0 0 0 0 1 0 0 0 0 0
....................................................................................................................GCCTTGTGAAGGGCTT....................................................................... 16 0 1 38.00 38 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTACG.................................................................... 24 0 1 17.00 17 0 0 0 0 15 0 0 0 0 2 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTT...................................................................... 22 1 1 12.00 12 7 0 0 3 0 0 0 0 0 0 0 2 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..................................................................... 23 1 1 9.00 9 3 0 0 3 0 0 0 0 0 0 0 0 2 1 0
................................................................................................................AGCTGCCTTGTGAAGGGCTT....................................................................... 20 0 1 9.00 9 0 1 0 7 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..................................................................... 23 1 1 8.00 8 5 0 0 0 0 0 0 0 0 0 1 1 0 0 1
..................................................................AGTTTTTCATTTGGCGTGGCTAG.................................................................................................................. 23 0 1 7.00 7 0 2 2 0 0 1 1 0 0 0 0 0 1 0 0
...............................................................................................................TAGCTGCCTTGTGACGGGCTT....................................................................... 21 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCCTTGTGAAGGGCTTA...................................................................... 17 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGCGAAGGGCTT....................................................................... 21 1 1 5.00 5 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTC....................................................................... 21 1 1 5.00 5 1 0 3 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGCCTTGTGAAGGGCTT....................................................................... 17 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CAGCTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAGGGGCTT....................................................................... 21 1 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCCT....................................................................... 21 1 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGTGGCTAAC................................................................................................................. 24 1 1 3.00 3 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTAAAGGGCTT....................................................................... 21 1 1 3.00 3 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGCGCTT....................................................................... 21 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGTGGCT.................................................................................................................... 21 0 1 3.00 3 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..................................................................... 23 0 1 3.00 3 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGCAGGGCTT....................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCTTTGTGAAGGGCTT....................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GGCTTGTGAAGGGCTT....................................................................... 16 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTTCCTTGTGAAGGGCTTA...................................................................... 22 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTAGC.................................................................... 24 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCCGCCTTGTGAAGGGCTTA...................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTG....................................................................... 21 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CCTTGTGAAGGGCTT....................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCC........................................................................ 20 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTTAAGGGCT........................................................................ 20 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.................................................................... 24 2 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0
...............................................................................................................AAGCTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGTGCTT....................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTA....................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGATT....................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GCTGCCTTGTGAAGGGCTT....................................................................... 19 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..................................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGCTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGTGGCTAA.................................................................................................................. 23 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTTAAGGGCTT....................................................................... 21 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGTG....................................................................................................................... 18 0 1 2.00 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................TAGCTGCATTGTGAAGGGCTT....................................................................... 21 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGTGGC..................................................................................................................... 20 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCCTTGTGAAGGGCTTT...................................................................... 17 1 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCGTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGGTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTTTGAAGGGCTT....................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAA............................................................................. 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCATTGTGAAGGGCTTA...................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAG............................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCCGCCTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGATTGGCTAGC................................................................................................................. 24 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGA.......................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTAAA..................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTCGCGAAGGGCTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGT........................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCG........................................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGACTTGGGAAGGGCTTA...................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTAGCTGCCTTGTGAAGGGCTTT...................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAGGGGCTTA...................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGTGGCTAGG................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGATGTCTTGTGAAGGGCTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GAGCTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGACTT....................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGTTGGGCTTA...................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGCCTTGTGAAGGGCTTT...................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTG...................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGTCGCCTTGTGAAGGGCTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGACTTGTGAAGGGCTTA...................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGGGAAGGGCGT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGCAGGCCTT....................................................................... 21 2 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGGCTTGTGAAGGGGTTT...................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCCGCCTTGGGAAGGGCTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGCCTT....................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AGCTGCCTTGTGAAGGGCTTA...................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTCCCTTGTGAAGGGCT........................................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGACTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAACTGCCTTGTGCAGGGGTT....................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGTCTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TACCTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTTGCGTGGCTATC................................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGTAGGGCGT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CAGCTGCCTTGTGAAGGGCTTA...................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACTACTTTTTTAATATT.............................................................................................. 19 0 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGATGGGCTTA...................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGTGCTTA...................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGAGGCCTTGTGAAGGGCTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGCTGCTAGC................................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGCGAAGGGCT........................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGACTTGTGAAGGGCGT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCCTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCGGCATTGTGAAGGGCTTA...................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................CGATTTTCATTTGGCGTGGCTAGC................................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TATCTGCCTTGTGAAGGGCT........................................................................ 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAACTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGATGGGGTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CTGCCTTGTGAAGGGCTT....................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGGTTTTCATTTGGCGTGGCTAGC................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTTCATTTGGCGTGGCTCGC................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCGTGTGAAGGGTTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAAGGCTTA...................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCTTC...................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TGGCTGCCTTGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGTCTTGTGATGGGCTT....................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CGAGATGCCTTGTGAAGGGCTT....................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTCTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGG........................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAAGGCT........................................................................ 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTCGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGTTTTCCATTTGGCGTGGCTAGC................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGCTGCCTTGTGAAGGGCTT....................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGGAGGGCTT....................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AGAGTTGCCTTGTGAAGGGCTT....................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCATGTGAAGGGCTT....................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGTAGCTGCCTTGTGAAGGGCTTA...................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGCAT....................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CCTTGTGAAGGGCTTA...................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGCGAAGGGCTTA...................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TCATTTGGCGTGGCTAGC................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TCATTTGGCGTGGCTAAC................................................................................................................. 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGATTTTCATTTGGCGTGGCTAGA................................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAAGGGA......................................................................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AGCTGCCTTGTGAAGGGC......................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ACGGTGCCTTGTGAAGGGCTT....................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGACTTGGGTAGGGCTT....................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTCTGACGTGCTT....................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AAGCTGCCTGGTGAAGCGCTT....................................................................... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCCTTGTGAAGTGCTT....................................................................... 16 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................AAGCCTTGTGAAGGGCTT....................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGACTTGTGTTGGGCTT....................................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TATCTGCCTTGTGAACGGCCT....................................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TGGAAGCCTTGTGAAGGGCTT....................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AGCCTTGTGAAGGGCTTT...................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAGCTGCCTTGTGAGGGCTT........................................................................ 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GCCCGGCTAGCTCACGACT......................................................................................................... 19 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TTTGGAATGGCTAGCTCA.............................................................................................................. 18 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GCCCGGCTAGCTCACTA........................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAGGGATTTTGTAAAAAAAAAAAACAATTTAAAAGGCGCACACTTTATGCTTCAACTAACATACAGTCAAAAAGTAAACCGCACCGATCGAGTGATGAAAAAATTATAACGATCGACGGAACACTTCCCGAATGCACATTAACGTCAAGTTGACGGTTTATTATATAAAAAATAAAAATAAAATTCTTTATGACAAATGGTAC

********************************************************....((((((((((.((((((((((..(((..(((((((...................))))))))))..)))))))))).)))))))))).....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488

RT_0-2 hours eggs

 SRR553486

Makindu_3 day-old ovaries

 O002

Head

 SRR553487

NRT_0-2 hours eggs

 SRR618934

dsim w501 ovaries

 GSM343915

embryo
.............AAAAAAAAAAAAAATTTAGTAGGCGC.................................................................................................................................................................... 26 3 1 1.00 1 0 0 0 1 0 0
................................AAGGCGCACACTTTATGC......................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
.AGGGATTTGGTATAAAAAAAAAA................................................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
........................CAATTTAGAAGGCGC.................................................................................................................................................................... 15 1 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................................................CGGTTTATTATATATAAAAT.............................. 20 1 3 0.33 1 1 0 0 0 0 0
.........................................................................................................................................................CGGTTTATTATATATAAAATAT............................ 22 2 3 0.33 1 1 0 0 0 0 0
........................CAATTTATAAGGCGC.................................................................................................................................................................... 15 1 6 0.17 1 1 0 0 0 0 0
...........................................................................................................AACGATCGACGGAACC................................................................................ 16 1 8 0.13 1 0 0 0 0 1 0
.............AAAAAAAAAAACAATTTA............................................................................................................................................................................ 18 0 9 0.11 1 0 0 0 0 0 1
...............AAAAAAAAACAATTT............................................................................................................................................................................. 15 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 x:113195-113397 - dsi-mir-980 Known_mirbase ATCCCTAAAACATTTTTT--------------------TTTT------TTGTTA--------------------------------------------AATTTT--CCGCG---TGT-GAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA------------TTTTTTAT-----------TTTTATTTTAAGAAATACTGTTTACCA---TG
droSec2 scaffold_10:47143-47348 - dse_14 confident ATCCCTAAAACATTTTTT--------------------TTTT---TT-TTGTTA--------------------------------------------AATTTT--CCGCG---TGT-GAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA------------TTTTT--T--------TATTTTTATTTTAAGAAATACTGTTCACCA---TG
dm3 chrX:174162-174362 - dme-mir-980 Known_mirbase ATCCCTAAACTATTTTTT-----TG------------TTTTTTATTTTT---------------------TGTTA-----------------------AATTTC--CCGCG---TGT-GAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTC-CC----GAA---TAATAAA------------TTTTTC-------GACTGTTTAAAATTT--------------ACCA---T-
droEre2 scaffold_4644:121595-121804 - der_10 confident ATCCTTAAACTATTT---------------------------------TTTTTA----------------AGTTAAAT--AAAT-A--------------ATTC--CCGCG---TGT-GAAATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTG-CA----AAA---TTATATA------------TTTTTGAT--------TGTTTGGAATTAAAGAACTACTGCCTATCA---AA
droYak3 X:117008-117225 - dya_19 confident ATCCTTAAAC-ATTTTTT--------------------TT------------------------------AGTTTAAT--AAATTA-A-------TG--ATTTC--CCGCG---TGT-GAGATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAGCTTTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACTGCCAAA---TGATATA------------TTTTTGAT--------TGTTTGGAAATTAAGGACTACTTTACATCA---TG
droEug1 scf7180000409277:495684-495913 - GGTCTTATCCTAATCCTGTTTCTTGTTTTTCTTTTCTTTTTT------TTTTTGAGTT----------TTGGTTAAAT--GAGTTG-------------AA-TT--GCGCG---TTT-GGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACCTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AGG---ATAAATG------------TCCTTTGA--------TATT---GT-----------CTTTA---CTTTTTA
droBia1 scf7180000301760:1131727-1131889 - GTCCCCATCCCAGTCCCC--------------------CTT-------CTCCTGAG----------------TTG--T--GAGT-T----------------GT--GCGCGG--TTT-CGGCGGCGAGGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTG-TTCAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTG-GC----A---------------------------------------------------------------------------
droTak1 scf7180000415179:121460-121702 - ATCCTTTTCT------TT---------------------TTT------TTTTTTGGTTTCTTAGTTTCTTAGTTCAAA--AAGTTG-ATTA-------AATTTC--CCGCGGTTTGC-AGAATGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGACTTCTGTTTAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTG-GC----AGG---ATGTGTG------------TCCTGGATTTTTCGA-GATTCGGGACTCAACGGATAACGTAAATCC---TT
droEle1 scf7180000491011:1178447-1178676 - ATCCCTATCCTAATCCTTTTTTT---------------TTGT----------TT----GC-----TTTTGAGTTAAGT--GAAT-A--TTG-------GTTTTG--CCGCA---TCTGAGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGACTTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-AC----TGGGATATATATG------------TCCTTGGT--------TATTCTGGATTAAACTGATA------A-CGTTTCG
droRho1 scf7180000779506:958237-958454 - ATCCGAATCCTAATCCTTTTCCTTG------------TTTTT------TTTTTG----------------AGTTAAGT--GAAT-A--------------TT------------T-G-GGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGACTTCTGTTAAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AAGG--ATATATG------------TCCTTAAT--------TGTCCTGGATTAAACGGACACGTATAAATA---TT
droFic1 scf7180000453927:606409-606563 - ATCCTAATCC------TT------------------------------------------------------------------------------------------TTT-----A-TATAAGTGAAGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACTTCTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTG-AC----TGAGATATATATA------------TCCTTGAA--------TATT-------------------------------
droKik1 scf7180000302544:871462-871622 + ATTTTT--------------------------------TTCT-------CTGTA----------------TGTGAAGGAAAAGC-A--------------A-----GTGCC---TGT-GGAAGTGCTAGTTAATTGTATGTCAGTTTTTCATTTGGCCTGCCTAGCTGACTTTC--ATAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACGG-AA----AGA---GGATATA---------------------------------------------------------------
droAna3 scaffold_13117:4815132-4815346 - dan_130 candidate-rescued ATCCTGTT------TTTT--------------------TTAT---TT-TTTTTA----------------TATTTAAA--AAGT-G-ATAA-------GAAATG--TC------C-------TAGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GC----AGA---ATATGTAAAGGACTTAGTGTTTTT--T--------TCTTTTTTTTTAAAGT-------TAAATCCTTTTT
droBip1 scf7180000395508:43106-43317 + TCCTTT-T------TTTT--------------------TTAAT--AT-TTTTTG----------------TATTA-AA--AAGT-G-ATTA-------GATTTG--TC------C-------TTGAAAGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GA----AAA---ATATTTAAAGGACTTTGTGTTTTC-----------TCTTTTTTTTTTA-GT-------TAAATCCTTTTT
dp5 XL_group1e:4097644-4097796 - dps-mir-980 Known_mirbase TTTTTT--------------------------------TTTT------TTTTTGAG----------------TGA--C--AAAT-TTCT-----GTG--AATTC--CCGCC-----A-CAAAAGAGAAACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------------------------------------
droPer2 scaffold_17:1039193-1039345 - dpe_10 confident TTTTTT--------------------------------TTTT------TTTTTGAG----------------TGA--C--AAAGTT-CT-----GTG--AATTC--CCGCC-----A-CAAAAGAGAAACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------------------------------------
droVir3 scaffold_10277:1006-1193 - dvi-mir-980 Known_mirbase TTTATTTATTTATTTTTT--------------------TTTT------TTTTTGAGT-GC------------TTA-AA--AGAC-G-CTGGGCTATAAAATTTGGACCAAA---TG-------TGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCTTTTA-ATACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACTT-AA----ACA---ACAAATAA--------------------------------------------------------------
droGri2 scaffold_14853:6339003-6339158 + dgr_25 candidate-rescued ATTCTTGTTATAGTGTTT--------------------TTTT------TTATTTAAT---------------------------------------------TC---TGAT---TA--T-----GAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTG-AG----GAA---AAATA-----------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCCCTAAAACATTTTTT--------------------TTTT------TTGTTA--------------------------------------------AATTTT--CCGCG---TGT-GAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA------------TTTTTTAT-----------TTTTATTTTAAGAAATACTGTTTACCA---TGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................2111324.001324170461517706401140749700000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................221285.00285815184273115301056701000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGC...................................................................................................................................................24185.008515321100001004301000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................20157.005717101406010117000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19157.00579200528000013000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18140.00400000114000025000000
................................................................................................................................................................................................GCCTTGTGAAGGGCTT.........................................................................................................16138.0038000000000038000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG......................................................................................................24117.0017000021500000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................22112.001200030000007002000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2319.00900030001003020000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................2019.00900070100000100000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2318.00800000010005001001
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAG....................................................................................................................................................2317.00721100000000210000
................................................................................................................................................................................................GCCTTGTGAAGGGCTTA........................................................................................................1716.00600000000006000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................2115.00531000000001000000
...............................................................................................................................................................................................TGCCTTGTGAAGGGCTT.........................................................................................................1714.00400000000004000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCT......................................................................................................................................................2113.00320000000010000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................2313.00300001100001000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAGC......................................................................................................2412.00220000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................2112.00210010000000000000
.................................................................................................................................................................................................CCTTGTGAAGGGCTT.........................................................................................................1512.00200000000002000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................................................................2012.00220000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................2412.00200000000100010000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................2112.00200000000002000000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1912.00200010000001000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................2312.00200000000001100000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAA....................................................................................................................................................2312.00200200000000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTG.........................................................................................................................................................1812.00200001100000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGC.......................................................................................................................................................2012.00200000100000100000
................................................................................................................................................................................................GCCTTGTGAAGGGCTTT........................................................................................................1721.50300000000003000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAA...............................................................................................................1511.00100000000001000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAG..............................................................................................................1611.00100000000001000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGA............................................................................................................1811.00100000000001000000
..............................................................................................................................................AGTTTTTCATTTGGCGT..........................................................................................................................................................1711.00100000000001000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCG..........................................................................................................2011.00110000000000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGG...................................................................................................................................................2411.00100000000000100000
...............................................................................................................................................................................................TGCCTTGTGAAGGGCTTT........................................................................................................1811.00100000000001000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................2211.00100000000001000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................2111.00100010000000000000
......................................................................................................................................................................TCACTACTTTTTTAATATT................................................................................................................................1921.00200000200000000000
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................1811.00100000000001000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................2211.00100010000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGG.............................................................................................................1711.00100000000001000000
.................................................................................................................................................................................................CCTTGTGAAGGGCTTA........................................................................................................1611.00100000000001000000
....................................................................................................................................................TCATTTGGCGTGGCTAGC...................................................................................................................................................1811.00110000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................................................................1911.00100010000000000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGC...........................................................................................................1811.00100000100000000000
droSec2
ATCCCTAAAACATTTTTT--------------------TTTT---TT-TTGTTA--------------------------------------------AATTTT--CCGCG---TGT-GAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTG-CC----AAA---TAATATA------------TTTTT--T--------TATTTTTATTTTAAGAAATACTGTTCACCA---TGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................21124813.00248133526496110166949
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................2212542.0025421473801722293
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGC...................................................................................................................................................241982.009822738804113
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201138.001382136846
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................221120.001203145638
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18193.0093317811
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................23170.007033141310
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAG....................................................................................................................................................23154.005429385
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................23140.0040881410
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19140.004002353
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................22127.002733156
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................20126.002616172
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................23124.002412804
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................23124.002406108
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCT......................................................................................................................................................21119.00190568
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................21117.00170395
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................24114.00144505
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................23112.00122532
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................21110.00107111
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................2117.0070331
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2316.0061140
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................2216.0060321
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................2215.0050212
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTA.....................................................................................................................................................2214.0040031
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGCT..................................................................................................................................................2514.0040040
...............................................................................................................................................GTTTTTCATTTGGCGTGGCTAGC...................................................................................................................................................2314.0043010
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1913.0030021
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................2113.0031011
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................................................................2413.0031101
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................1913.0033000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGC.......................................................................................................................................................2013.0030030
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT......................................................................................................2413.0030111
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................2113.0032100
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................2412.0020020
................................................................................................................................................TTTTTCATTTGGCGTGGCTAGC...................................................................................................................................................2212.0021100
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGCA..................................................................................................................................................2512.0020020
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGT...................................................................................................................................................2412.0020011
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................................................................2012.0020020
..............................................................................................................................................AGTTTTTCATTTGGCGTG.........................................................................................................................................................1812.0020002
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................................................................2212.0022000
.............................................................................................................................................CAGTTTTTCATTTGGCGTGGCTAGC...................................................................................................................................................2512.0020020
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.......................................................................................................2312.0020200
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................1811.0010100
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTACG......................................................................................................2311.0010010
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTA.......................................................................................................2211.0011000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGCT...........................................................................................................1911.0010010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCGG.........................................................................................................2111.0010001
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2211.0011000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.....................................................................................................2511.0010010
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTAT.......................................................................................................2111.0011000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2411.0010010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................1911.0010001
......................................................................................................................................................................................ATTGCTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2711.0010100
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTT.....................................................................................................................................................2211.0010001
.....................................................................................................................................................................................TATTGCTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2811.0010010
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTGAT...................................................................................................................................................2411.0010010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACA......................................................................................................2411.0010010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................................................................2011.0010001
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGCTCA................................................................................................................................................2711.0010010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA......................................................................................................2411.0010001
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG......................................................................................................2411.0010010
.........................................................................................................................................................................................GCTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2411.0010010
dm3
ATCCCTAAACTATTTTTT-----TG------------TTTTTTATTTTT---------------------TGTTA-----------------------AATTTC--CCGCG---TGT-GAAATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTC-CC----GAA---TAATAAA------------TTTTTC-------GACTGTTTAAAATTT--------------ACCA---T-SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................2117300070.0073000700000210004212229041930030441214508922329820124194180421522526513830417428328954014612661869079193168763123716625012314273313200000000000000000000042288103927383491521431634422951274636250287214343981210629727601201131532046338430001001000346619876614151105737723763738848488811632754830014891026377508431964861679327724101104527419195242051761349111381971213892966325111212321451131802704160143380200000271248131582201118953220628315355124486640380094587105123716224875995206246000014021549216263539492876511692411489332541116222925655112555865549792264012043548074163900184456655912997361725504834771330780525054130441139971086191418112493271133341319724222519350187027439225024351078835555981674656985615965069203528364216164223225782193794224578519729010181331173317576615271915239720555372192082839797413614862382136560152411552511368555575157671418277629256119191113545922559521692045171696250
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................221365806.0036580600002152330331026240071002254229407419721118178222152733544314442111193221483638293051423346109135504810000000000000000000221644021043812105322260620463661248522158431021621972112561282049194060309168132963913654220216027517283221000021000014797515612311632169664482216261101602106715158020584304088861130063561484248181941404243472347311305191166133852381114310538293000000142403080002233117170114132662575764157539635329634611325530394922590000110112615184147120559983786710524611113113361555681593147213544145748331142356215454099231813743135881293102721071700231133618954381502831184752968762340132837425616426214644445623700583732251193015381392446691898311181148723464212164103214411881485317435195179637514242431616232825226303149206661009736490
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201140583.001405830000000000000000090032411015486010151100482917491222251223192943513175156000000000000000000000000000041361101010002002000554790501102050034600022402122325000000000047315602192116814006111000820295493127943147878104034105813018132029501583111614401916901000503000000620001003928396430524878158290000310023450036100006263206274103615100038101337612103140911376158723808641244056112018191861130729365581558855650112150147173176303642561292852061832122011969793855288717321070107269982543271143230920727593811108334227325179210938610614401157177371931730
..............................................................................................................................................AGTTTTTCATTTGGCCTGGCTAGC...................................................................................................................................................24122741.002274100003000040004002100000000101021201001000002030100001000010100000000000000000000015042470170203000175910013129013001043300760004426010000000400000000600000020100073352434450800014270310312031365151204650500000000000010000000000014612293235104725166239751510428086899435200000200512493937227635824056168121138842627212181645324519152210311537210105010152331391101931218113390031320003222443002120782187021824158911046210001270121125235390
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................22114710.001471000000010000001000170001180462000000000200224511811101400100000000000000000000000000010062042720313001519006516454334012330012510140000001028054130000000000522002012030312010000014351102188664196104074007410070342300077417962024000000001000000630000004323051975942788001400003400330000951287218816063936669113297411884418710460192111610347067353462403012070668576142893326253413171423682212282201336131283131798153143123887921420020694116112327011613422684611
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................23114518.001451800000000000001000000001002470000000033161113022211190015628000000000000000000000000000002000000000000000000001010000000000000000000000000000000352700643322010230000009056101130000310100020000225114000100021490000052000000268317220132613370000000012001800003501011732021594478878112221222057135352453293121023646457231313738394141104153885825101038232323412119926552371634142491418751011620614449380141602102286152221169371832321912069949013330
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18114230.001423000000000000000001000010102500000120010001000400120000000010000000000000000000000000000100000010010100201460030000001010100000111000010000004000051002650000000002942345116030010000000122016832211504010000010000002100100016814316162436860000000095118840000111212418461221151001615338950311871756138751707681112735036439220000010211164421251131122214223432273310001221127651271021129801744116111261153349151611193311443634210
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19110317.0010317000000000000000002000203031901031011030021000101100031000000000000000000000000000000000030000000000000020428000000000001010000000000003000000513003110178000000000357389922143010111031012002514251480000000001000000630000002152041091315286600000000572458000017144772070186211151166486106282135419545151191127999448596464033121101059986109430232316117751410401002052721229103169244845595182932185720048151433200
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2319378.0093780000100000001900010000010022000000001210021118191101017005000000000000000000000000002005528561044104480039290961271413021101019101800001021241131100000000002280434375187000200000118394238883750740510046210120230200022353211322501000140800000101000000228168804881528100901046800470000620943013610816041801966156311104920123810112383104466252215231263417092837449211516715134101211102822926111714479042065621736362345331230136521145151070663833542590
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................2118349.008349000010000000020000000000001900000000010000010001011100451510000000000000000000000000000001000000000000000000000100000000000000000000000100000000100010013300000000061173822000003002000000204821100000000000000000100000030322513242318000100006003000036144331101283122815438261571561968112404527824157141071391211440127621643211479805321699241433190132866103110258120942673235935510541411615191118413822701720
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................2217176.0071760000000000000000000000000013100000000000000101010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200201205702000000010010228011000120000000001046200001000001200000010000007810059041300000000100300002204247144144600272927634196282207515510553164214518106142001000501431001068121251162119551102290129159310538101932549756272417205719161314231006767732400
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................2016689.00668900000000000000000000000006242000000000000011000100001106717500000000000000000000000000000010000000000000000143410000000011000010000100000000000001001001155000000000150137914183901107101000100415281812000100000100000001000000155177132334200011001300000001013229685342119084752297068165313420312391211111991614121102353216141031078726321630400214071282180262357125913124735106685141736880757381870
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2314602.00460200000100100002000300010000170000000021131013102132213360100000000000000000000000100009162036300230073610244042241881100311301500000000802500000000002021400116055620030000004501522426353801900610020408406212002802010003310000001840200002091085522442516300311015390028000068034147832421120106479603318571330012823447201277921101304493191184161459849227827824105141701144760620433821520322928483814882735031251110540
..............................................................................................................................................AGTTTTTCATTTGGCCTGGCTAG....................................................................................................................................................2314164.00416400000000000000000000000000200000000000000000000000000021001000000000000000000000000025032000000200000000610200002002010010000010010000001000000000000080000231813817374001604702000201051200101110000000000000000000000007847210131014185722383394839200002202329561214011611271057031312411403711727731192660016041331215911313532226600102000142249301212169592145937326023030101713683891220
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................2213041.0030410000000000000100000000000028000000000000013100100030100000000000000000000000000000000002030000000100000011103300000000004000000000262771200000000001000000010200000000009131112213100200200000000016142300000000002000001000000074424032170000000013001100004200444819830112045311152057852104103016518111862780200020235423111242336852050105032838100014541060645601113120200923442320
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................2112871.0028710000000000000100000000000214000000000001102013010002001140000000000000000000000000000000010000000000000001000000010000000000000000000000000001120007110538000000000806391121100000000010000054626000000000040000014002000120747310106000000003003000030015112739313110182772302142351103610315988719100421030114283617131289450004638110290613633840301213238012984027175302401426664740
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................2112857.0028570000000001000000010000000040000000100000000001000010011310000000000000000000000000000001000000000000000010000000000000000000100000000000000010000000009001000000301516171000000000001000211504400000000000000000000000043213501830000000000020000010043411612600115121401221026917513120107135543858210010014795719832525373540121208281051100133432810004650806320114130201001210524360
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................2212823.00282300000000001011000100000001500000000000101000200020002000000000000000000000000000000000110000000000000002120000010000000000000002000000000002100020000260000000007202440450500300001030020341510101001004000000000000046443907170000000040010000320431726550021912336611341731304038901410333874021101011026401282260233388111014047428220026737311029112604349783620252011201150
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................2312458.002458000000001000010000000000001000000000110100130000002510000441000000000000000000000000300910000001200020101781012200012002000000002040000000000021200230212100000000012041210514000054030002002016010110000000000000011000000715942715410001000011500140000120226452380180112451102615406110358827142974168210312037901047412113213411232461033460020218721011211213323300140210016112100590
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1912331.002331000000000000000000000000006000000000000010011000000000000000000000000000000000000000000000000000001100010100000000000001000000000000000000000000000001700000000091003201000000001000000000047100000000000000000000000007410537110300000000000000005301092333000622224162302772340101710064422943001111001639632364200210582401023043130100113729312184741272634104015135610
..............................................................................................................................................AGTTTTTCATTTGGCCTGGCT......................................................................................................................................................2111350.0013500000000000000000000000100100000000000000000000000010021000000000000000000000000001000000200000010000000000041301000000000000000000000000000000000000000040010129000000000000001010201000001000000000000000000000000030020000200150135225500001000042510040313201052120003139616117250000010011211020100000150000100008230001341201310010001000041616241550
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................181909.00909000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010013800000000013010162545010000000000000013655000000000000000000100000011378680041000000001002000011000163000106821206270010411615111040000000023210001200130166101001000523000020140001470040110000018210
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................231766.007660000000010000000000000110030000000000000001030000100000000000000000000000000000000000010000000114000201453000000020050000000040650000000000000000000019000000000139075562401210620007060014301201000000000000000000000013122133500010000100201000000056800130510200022410000019404253130200000101626200212800108330100001203000017110201421076961024095813370
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................191696.0069600000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000020000000000000000000040000000000000000000000000061100130000000010010000011025112000020716211030600006414351241400000000058101111200001132010000012500001571013440172640022031607290
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................241671.006710000000000000000000010000010000000000011115200000021300000000000000000000000000000030030500000101000002001010001000000200000000003100000000003242201182952100000000002002301100400210200010000206000210000000000061000000081089253000100032003000010020251100100150000211100017201232115228152141701203100102000222581930121624110342120257317021211002358120
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................241535.00535000000000100000000000000001000000000000001001000000000100000000000000000000000000000001000000000000040014120000000001000000001011000000000000000000101500000000000000045040033020102000020120100000001000000000000001213904070001000040000000000002430000022100011210200062733316120002000032011011210001530020010270000203490012953071451110043134190
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................211449.0044900000000000000000000000001120100000000000000000000000000000100000000000000000000000011010000000000000000300000000000060000000030100000000000000001000010000000003004011212301200115131122900105015000000000100000000000000369803020001000130010000010003540001001100042200011155514100000000063000010002004200000000008000025901016570210000000320130
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................................................................191399.00399000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000110000000000000000000000000249001000000000800200000000111160002031210103010011711214114010000000002301010100011771000000311300013410140141106020010106564160
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................231296.002960000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000001602001001000000000020000000000000000000000008143001000000000100400001100015400010120000836201041821918000000000022001000005014900000000008001037700015181400300010112000
...............................................................................................................................................................................................TGCCTTGTGAAGGGCTT.........................................................................................................171282.002820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211661327600000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCG..........................................................................................................201280.002800000000000000000000000000010000000100000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101700100001000001000002401000000000000000000000000722000000000000000400000010010100000531010302000052401212000000010061101102213100001210000000102000010000000000000000004000
droEre2
ATCCTTAAACTATTT---------------------------------TTTTTA----------------AGTTAAAT--AAAT-A--------------ATTC--CCGCG---TGT-GAAATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTG-CA----AAA---TTATATA------------TTTTTGAT--------TGTTTGGAATTAAAGAACTACTGCCTATCA---AASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................21139978.0039978181925471154313217196630
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................2213801.003801646566854123611920
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201427.004271142715332020
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................221267.00267101135166630
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................231152.0015260027044210
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................201140.001408505116330
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................231107.001070021128570
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................231100.001005309017183
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAGC...................................................................................................................................................24190.00903326101290
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18145.004530007350
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................21141.004136010310
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................23136.0036150301170
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19135.003524403220
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................21135.003501406240
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................22132.003270204190
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................24122.002250401120
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................21119.001910050220
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................22117.001710501100
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................21112.00120041340
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................22111.00111100540
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2218.0088000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................2118.0087000100
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1918.0080010250
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAG....................................................................................................................................................2317.0072100040
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................2317.0070010150
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................2416.0060000420
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................1815.0050010400
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCT......................................................................................................................................................2115.0051000040
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2314.0043000010
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2214.0044000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................1914.0044000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................................................................2313.0032010000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................................................................2013.0031010010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.....................................................................................................2513.0032000010
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTTT......................................................................................................2312.0022000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................................................................2012.0020100100
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTA.....................................................................................................................................................2212.0020000020
..............................................................................................................................................AGTTTTTCATTTGGCGTGCC.......................................................................................................................................................2012.0020000020
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................................................................2412.0021000010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................................................................1912.0020000110
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................1912.0020000020
...............................................................................................................................................GTTTTTCATTTGGCGTGCCTAG....................................................................................................................................................2212.0022000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT......................................................................................................2412.0021000100
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT......................................................................................................2412.0020010100
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................................................................2111.0011000000
................................................................................................................................................TTTTTCATTTGGCGTGCCT......................................................................................................................................................1911.0010000010
.........................................................................................................................................................................................GCTAGCTGCCTTGTGAAGGGCTT.........................................................................................................2311.0011000000
..............................................................................................................................................AGTTTTTCATTTGGCGTG.........................................................................................................................................................1811.0011000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAG.......................................................................................................2211.0011000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA......................................................................................................2411.0010000100
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.......................................................................................................2311.0010000100
droYak3
ATCCTTAAAC-ATTTTTT--------------------TT------------------------------AGTTTAAT--AAATTA-A-------TG--ATTTC--CCGCG---TGT-GAGATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAGCTTTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCGACTGCCAAA---TGATATA------------TTTTTGAT--------TGTTTGGAAATTAAGGACTACTTTACATCA---TGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................2119564.009564216082476631835395722330000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................2211136.001136116987771774501750000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAGC...................................................................................................................................................241161.001610315060110000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201156.001561291010357010000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................221119.00119144711639110000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................20153.0053047003300000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................23141.00410000122180000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................23137.00370140021380000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................23131.0031017103910000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................21130.0030002201430000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................22123.002302671250000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19120.0020041301110000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................22118.0018011041020000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................21116.0016015100000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................22116.001601003930000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................23114.001403002720000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18111.001100304220000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAG....................................................................................................................................................2319.00904500000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................2117.00700102310000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................2317.00701210210000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................2415.00500000230000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................2114.00404000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCT......................................................................................................................................................2113.00301020000000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1913.00302000010000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................................................................2013.00300300000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................2413.00300001110000
................................................................................................................................................TTTTTCATTTGGCGTGCCTAGC...................................................................................................................................................2213.00300300000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................2113.00301010010000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................1912.00201000100000
.............................................................................................................................................CAGTTTTTCATTTGGCGTGCCTAGC...................................................................................................................................................2512.00200200000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................................................................2412.00200000020000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTT........................................................................................................2012.00202000000000
......................................................................................................................................................................TTAGCTTTTTTTAAATATTGC..............................................................................................................................2112.00200200000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................................................................2112.00202000000000
...............................................................................................................................................GTTTTTCATTTGGCGTGCCTAGC...................................................................................................................................................2312.00202000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTA.....................................................................................................................................................2212.00201100000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................................................................2211.00101000000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2311.00100000100000
...............................................................................................................................................GTTTTTCATTTGGCGTGCCTAG....................................................................................................................................................2211.00101000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGAA..........................................................................................................2011.00100000100000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGAC..........................................................................................................2011.00100100000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................1911.00101000000000
........................................................................................................................................................................................TGCTAGCTGCCTTGTGAAGGGT...........................................................................................................2211.00100000010000
.................................................................................................................................................TTTTCATTTGGCGTGCCTAGC...................................................................................................................................................2111.00100100000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTGA.......................................................................................................2311.00100000100000
droEug1
GGTCTTATCCTAATCCTGTTTCTTGTTTTTCTTTTCTTTTTT------TTTTTGAGTT----------TTGGTTAAAT--GAGTTG-------------AA-TT--GCGCG---TTT-GGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACCTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AGG---ATAAATG------------TCCTTTGA--------TATT---GT-----------CTTTA---CTTTTTASizeHit CountTotal NormTotal
No Reads
droBia1
GTCCCCATCCCAGTCCCC--------------------CTT-------CTCCTGAG----------------TTG--T--GAGT-T----------------GT--GCGCGG--TTT-CGGCGGCGAGGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTG-TTCAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTG-GC----A---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATCCTTTTCT------TT---------------------TTT------TTTTTTGGTTTCTTAGTTTCTTAGTTCAAA--AAGTTG-ATTA-------AATTTC--CCGCGGTTTGC-AGAATGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGACTTCTGTTTAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTG-GC----AGG---ATGTGTG------------TCCTGGATTTTTCGA-GATTCGGGACTCAACGGATAACGTAAATCC---TTSizeHit CountTotal NormTotal
No Reads
droEle1
ATCCCTATCCTAATCCTTTTTTT---------------TTGT----------TT----GC-----TTTTGAGTTAAGT--GAAT-A--TTG-------GTTTTG--CCGCA---TCTGAGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGACTTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-AC----TGGGATATATATG------------TCCTTGGT--------TATTCTGGATTAAACTGATA------A-CGTTTCGSizeHit CountTotal NormTotal
No Reads
droRho1
ATCCGAATCCTAATCCTTTTCCTTG------------TTTTT------TTTTTG----------------AGTTAAGT--GAAT-A--------------TT------------T-G-GGAAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGACTTCTGTTAAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-GC----AAGG--ATATATG------------TCCTTAAT--------TGTCCTGGATTAAACGGACACGTATAAATA---TTSizeHit CountTotal NormTotal
No Reads
droFic1
ATCCTAATCC------TT------------------------------------------------------------------------------------------TTT-----A-TATAAGTGAAGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACTTCTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTG-AC----TGAGATATATATA------------TCCTTGAA--------TATT-------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATTTTT--------------------------------TTCT-------CTGTA----------------TGTGAAGGAAAAGC-A--------------A-----GTGCC---TGT-GGAAGTGCTAGTTAATTGTATGTCAGTTTTTCATTTGGCCTGCCTAGCTGACTTTC--ATAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACGG-AA----AGA---GGATATA---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATCCTGTT------TTTT--------------------TTAT---TT-TTTTTA----------------TATTTAAA--AAGT-G-ATAA-------GAAATG--TC------C-------TAGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GC----AGA---ATATGTAAAGGACTTAGTGTTTTT--T--------TCTTTTTTTTTAAAGT-------TAAATCCTTTTTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................21128659.0028659952327934581004514093
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................2211822.001822283145527501492
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201246.0024610010126316
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................221238.002385700527653
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................211182.0018210019090
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................231120.00120500343150
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................20196.009672007611
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................21196.009601055238
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................21182.008200026218
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................23166.0066300018711
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................23162.00622300171210
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................22145.004530018915
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18137.00376105223
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................23131.00317009114
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................21131.00312800210
..............................................................................................................................................AGCCTCTCATTTGGCCTGCCTAGC...................................................................................................................................................24130.00302640000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19122.00222501401
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................22112.0012300621
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1919.009400131
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................2418.008100601
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................1917.007700000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................2315.005100202
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................2215.005000212
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................2415.005100031
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................................................................2414.004200011
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................1914.004100021
..............................................................................................................................................AGCCTCTCATTTGGCCTGCCTAG....................................................................................................................................................2314.004310000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................................................................2314.004000013
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................1813.003200010
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................................................................2213.003300000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2213.003300000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTGT.......................................................................................................2312.002000200
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTAT........................................................................................................2212.002000101
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2212.002200000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................2112.002200000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCG..........................................................................................................2011.001000100
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA......................................................................................................2411.001100000
droBip1
TCCTTT-T------TTTT--------------------TTAAT--AT-TTTTTG----------------TATTA-AA--AAGT-G-ATTA-------GATTTG--TC------C-------TTGAAAGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTT-GA----AAA---ATATTTAAAGGACTTTGTGTTTTC-----------TCTTTTTTTTTTA-GT-------TAAATCCTTTTTSizeHit CountTotal NormTotal
No Reads
dp5
TTTTTT--------------------------------TTTT------TTTTTGAG----------------TGA--C--AAAT-TTCT-----GTG--AATTC--CCGCC-----A-CAAAAGAGAAACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................21110506.001050602346446050538093737050
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................2211895.00189507132017877982172401
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201532.0053203534641614000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGC...................................................................................................................................................241466.004660235991131450000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................221253.0025301620316126000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................201193.001930180000112000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAG....................................................................................................................................................231184.00184017053320100
..............................................................................................................................................AGTCTCTCACATGGCTGGTC.......................................................................................................................................................201180.00180017712000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCT......................................................................................................................................................211126.00126212012010000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................231110.00110093001132010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19186.0086166420121000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................23175.0075061100103000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................21149.004904800001000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18148.004804100160000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTA.....................................................................................................................................................22132.003212803000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................19129.002902900000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................23129.002901900064000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................19122.002201400035000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................21119.00190143164000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................21118.001801800000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAGC...................................................................................................................................................23117.001701700000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGT...................................................................................................................................................24116.001601500100000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................22115.00150511044000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................23114.00140400082000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................19113.001301000210000
...............................................................................................................................................GTCTCTCACATGGCTGGTC.......................................................................................................................................................19112.001201200000000
..............................................................................................................................................AGTCTCTCACATGGCTGGT........................................................................................................................................................19111.001101100000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAG....................................................................................................................................................22111.001101100000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCT..................................................................................................................................................2518.0080800000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGC...........................................................................................................1818.0080800000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................2218.0080100061000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................2317.0070300022000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTT.....................................................................................................................................................2217.0070601000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................2416.0060400011000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGTT...........................................................................................................1916.0060500010000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2216.0060600000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCA..................................................................................................................................................2516.0060500100000
...............................................................................................................................................GTCTCTCACATGGCTGGTCT......................................................................................................................................................2016.0060600000000
..............................................................................................................................................AGTCTCTCACATGGCTGG.........................................................................................................................................................1815.0050500000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2215.0050500000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2315.0050110030000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................2414.0040100020001
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................2213.0030200010000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................................................................2113.0030101001000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................................................................2013.0030300000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................2113.0030100011000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2413.0030200001000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCC......................................................................................................................................................2113.0030003000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................................................................2423.0060500010000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAT....................................................................................................................................................2313.0030300000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAT......................................................................................................2412.0020200000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCA......................................................................................................................................................2112.0020200000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................................................................2012.0020020000000
.................................................................................................................................................CTCTCACATGGCTGGTCTAG....................................................................................................................................................2012.0020200000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGC...........................................................................................................2012.0020101000000
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................1812.0020200000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTC........................................................................................................2112.0020110000000
...............................................................................................................................................GTCTCTCACATGGCTGGT........................................................................................................................................................1812.0020200000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................................................................1912.0020200000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................................................................2212.0020200000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCTT.................................................................................................................................................2612.0020200000000
...................................................................................................................................................CTCACATGGCTGGTCTAGC...................................................................................................................................................1912.0020200000000
...............................................................................................................................................................................................TGCCTTGTGAAGGGCTTAA.......................................................................................................1911.0010100000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTTT....................................................................................................................................................2211.0010100000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCC..................................................................................................................................................2511.0010000010000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAGT...................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTAT.......................................................................................................2111.0010100000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTA.....................................................................................................................................................2111.0010100000000
......................................................................................................................................................................TGACTTGTT-TCTAATATTGC..............................................................................................................................2011.0010010000000
droPer2
TTTTTT--------------------------------TTTT------TTTTTGAG----------------TGA--C--AAAGTT-CT-----GTG--AATTC--CCGCC-----A-CAAAAGAGAAACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................21128972.0028972452017540701375210451
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................2213275.0032752160207662063264
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201785.00785346214456327
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................221320.0032004904017655
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................201119.00119035011685
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................23163.0063013012353
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................23155.0055010012312
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19152.005211015341
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAG....................................................................................................................................................23149.00490413140
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGC...................................................................................................................................................24146.00460359020
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18145.00450407277
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................23138.0038000101612
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................22135.00350105290
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................22130.00300105177
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................21128.00280004222
..............................................................................................................................................AGTCTCTCACATGGCTGGTC.......................................................................................................................................................20126.00260240020
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................21123.00230140450
..............................................................................................................................................AGTCTCTCACATGGCTGGTCT......................................................................................................................................................21121.00215150010
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................23121.0021050493
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................19116.0016010249
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................21115.00150002130
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................21112.0012010191
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................23111.0011011261
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................22110.0010000181
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1919.009020430
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................2418.008010160
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................2417.007010060
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................2116.006030120
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................................................................1915.005000014
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................1814.004010021
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGT............................................................................................................1814.004000040
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTA.....................................................................................................................................................2214.004040000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCA..........................................................................................................2013.003000030
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAG....................................................................................................................................................2213.003030000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................................................................2313.003000111
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................1913.003020010
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2312.002000110
......................................................................................................................................................................TGACTTGTT-TCTAATACTGC..............................................................................................................................2012.002020000
droVir3
TTTATTTATTTATTTTTT--------------------TTTT------TTTTTGAGT-GC------------TTA-AA--AGAC-G-CTGGGCTATAAAATTTGGACCAAA---TG-------TGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCTTTTA-ATACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACTT-AA----ACA---ACAAATAA--------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................21129096.00290961428916433121257833121249492510480001023108048612171033714367130722967187074222223139449634130943076132814150000000022412102008450345334330080007119791100000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................22115065.0015065261921752271932262713000142516133248031226103012314022470233659522824924166510067402322534774560000000000000000000152771730147400000001200000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................2211272.001272002706201921640007810240127797313111217254122519135212660260100935000000000000000100001310061800000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................231578.005780016057100000004858947413914693143611918296340200002140000000000000000000013041100000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................201515.005151241214251410912130001522164124111019552901646150503000001544000000000000100000001200000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................231416.004160029013300100002349103429270376942388313318040000090000000000000000000024081200000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................................................................221172.00172106025000200007414147421820000180100800001130000000000000000000014200000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................231131.0013100100220000000710721109282631001113303001011000000000000000000001105000000000000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................20191.009100800000000000010121000000000010000000001000000000000000000002200000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................23190.0090001002153230005622321442001103030200002600000000000000000000111000300000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................19182.008221600220132000712243114660001000004000015000000000000000000104000000000100000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................................................................24174.0074001000000000009421075041300021311312001002000000000000000000001001000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTAGC...................................................................................................................................................24172.007220158000000000032161001700011431001000001000000000100001100114200000000010200000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................22158.00580110001012100023242124311213010006000001000000000000000000014700000000000000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................22156.00560061010300100014311605511021010300000000000000000000000000003600000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................................................................24152.00520010100000000061181505800112430300000000000000000000000000000001000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................18146.00460000052200400035133010120000000006000026000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................21143.00434002042200100003002031200010010001000011000000000000000000014700000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTAG....................................................................................................................................................23134.00340050110000000012050010500011101200000001000000000000000000015000000000000000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................23127.00270000000000000022113204601001000300000000000000000000000000001000000000000000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................21122.002200120000000000003001000100010010100000000000000000000000000001100000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................23122.00220010010000000022100203600001010000000001000000000000000000001000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................21121.00210000020200100006001020200000010000000000000000000000000000003100000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.......................................................................................................23114.00140000000000000012000002600100000000000001000000000000000000000100000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................................................................24112.00120000000000000001031201200000010100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TGCCTTGTGAAGGGCTTA........................................................................................................18111.00110010001000000002120101010000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................................................................18111.00110030030001300000001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATC......................................................................................................24111.00110010000000000020000000000000020400000002000000000000000000000000000000000000000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................19110.00100040000000100000000000110000000000000010000000000000000000002000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.....................................................................................................2518.0080000000000000001000000110100011101000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................................................................2318.0080000000100000000000000210000010101000001000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATCC.....................................................................................................2517.0070000000000000000000000000000010100000001000000000000000000000400000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACC......................................................................................................2417.0071010000000000000000000000000000000000000000000000000000000000500000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTAGCC..................................................................................................................................................2517.0070012000000000000000000000000000000000000000000000000020000020000000000000000000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................................................................2016.0060030000000000000000002000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT......................................................................................................2416.0060000000000000001001001200000000100000000000000000000000000000000000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTA.....................................................................................................................................................2216.0060020000000000011000000100000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCT.......................................................................................................2316.0060000000001000000010010100000001000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................2125.00100010000200000002000020100000000000000000000000000000000000002000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATA......................................................................................................2415.0050000000000000000011001000000000001000001000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................................................................2015.0051210000001000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTT......................................................................................................................................................2114.0040010000000000000010000000000000100000000000000000000000000001000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................................................................1914.0040000000100000000000100000000000000000000000000000000000000000200000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTGT......................................................................................................2414.0040000000000000000010000000000000000000000000000000000000000000000300000000000000
..............................................................................................................................................................................................CTGCCTTGTGAAGGGCTTA........................................................................................................1913.0030000010000000001000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTT........................................................................................................2313.0030000000000000000010101000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGG.............................................................................................................1713.0030000000000000000000000000000000000000000000000000000000300000000000000000000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2212.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTC........................................................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................................................................1912.0020000000000000000000000000000010000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAA......................................................................................................2412.0020000000000000000000000100000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCA.......................................................................................................2312.0020000000000000000000001010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................................................................2112.0020000000000000000000000200000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTAT........................................................................................................2212.0020000000000000002000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTCC........................................................................................................2221.5030000000000000000000030000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTAAAA.....................................................................................................2311.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
droGri2
ATTCTTGTTATAGTGTTT--------------------TTTT------TTATTTAAT---------------------------------------------TC---TGAT---TA--T-----GAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTG-AG----GAA---AAATA-----------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................................................................2111923.0019231671756
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................................................................221202.0020289113
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................................................................20127.0027252
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................................................................22118.0018117
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................................................................23116.0016133
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................................................................20111.0011101
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................................................................2319.00945
..............................................................................................................................................AGTCCCTCATTTGGCGGACTTAGC...................................................................................................................................................2416.00660
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................................................................1915.00550
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................................................................2114.00440
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................................................................2314.00404
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................................................................2313.00303
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................................................................2213.00312
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................................................................1812.00220
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGC...........................................................................................................1812.00220
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................................................................2112.00220
..............................................................................................................................................AGTCCCTCATTTGGCGGACTTAGGC..................................................................................................................................................2511.00110
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................................................................2111.00101
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................................................................2111.00101
..............................................................................................................................................AGTCCCTCATTTGGCGGACTTAG....................................................................................................................................................2311.00110
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................................................................2311.00110
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................................................................2211.00110
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................................................................2111.00101
..............................................................................................................................................AGTCCCTCATTTGGCGGAC........................................................................................................................................................1911.00110
.............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................................................................1911.00110
........................................................................................................................................................................................................AAGGGCTTACGTGTGATTGT.............................................................................................2011.00110
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCG.......................................................................................................2311.00110
............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................................................................1911.00110
..........................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................................................................2311.00110
...........................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................................................................2211.00110

Generated: 10/20/2015 at 07:00 PM