ID:

dsi-mir-967

 Coordinate:

2l:12116773-12116872 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

utr3 [utr3_minus_1284]

No Repeatable elements found

Sense Strand Reads

GAAAACCAAAAAAAAAAAAACACCAAGAAAACCAAAACTGAGAACTGCAGGAGACTTGGAGAGCAGAGATACCTCCGGAGAAGCGCGTGACCTGACCCCAGCAGGAGAACCCAACCCGCTTTTCCGCCTAGGTGTCTCTCTCTCTCTCTCACTCTATCTCAGTTCCTCAGCTCGAGAGTGTGTATCTTACCCCGAGTGTG

*************************************************.((((...((((((.((((((((((.((((((((((.((..((((.......))))........)).))))))))))...)))))))))))))))).))))......******************************************** 		Read size # Mismatch Hit Count Total Norm Total M023

head

 M024

male body		 O002

Head

 M025

embryo

 GSM343915

embryo

 M053

female body

 SRR618934

dsim w501 ovaries

 SRR553485

Chicharo_3 day-old ovaries

 O001

Testis

 SRR553486

Makindu_3 day-old ovaries

 SRR553487

NRT_0-2 hours eggs

 SRR553488

RT_0-2 hours eggs

 SRR902009

testis
................................................................AGAGATACCTCCGGAGAAGCG................................................................................................................... 21 0 1 78.00 78 38 2 0 8 10 6 5 4 0 1 1 3 0
................................................................AGAGATACCTCCGGAGAAG..................................................................................................................... 19 0 1 53.00 53 29 22 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCC........................................................... 23 1 1 17.00 17 10 2 0 3 1 0 0 0 0 0 0 1 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCT........................................................... 23 0 1 14.00 14 8 1 0 2 2 1 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGCGCG................................................................................................................. 23 0 1 13.00 13 0 0 9 0 1 0 0 0 3 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGC.................................................................................................................... 20 0 1 12.00 12 4 1 4 0 1 0 2 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTC.............................................................. 20 0 1 10.00 10 6 3 1 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAA...................................................................................................................... 18 0 1 10.00 10 0 0 6 0 0 0 0 1 3 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCGCGT................................................................................................................ 22 0 1 7.00 7 0 0 1 0 0 0 3 1 0 0 2 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTC................................................................ 21 0 1 6.00 6 1 3 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTC............................................................ 22 0 1 6.00 6 4 0 1 0 1 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGCGT.................................................................................................................. 22 1 1 6.00 6 2 0 0 0 0 0 0 2 0 0 2 0 0
................................................................AGAGATACCTCCGGAGAAGCGC.................................................................................................................. 22 0 1 4.00 4 0 0 1 0 2 0 0 0 1 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCT............................................................... 22 0 1 4.00 4 0 2 0 0 0 0 1 1 0 0 0 0 0
................................................................AGAGATACCTCCGGAGA....................................................................................................................... 17 0 1 4.00 4 0 0 0 0 0 0 0 0 0 4 0 0 0
....................................................................................................................CGCTTTTCCGCCTAGGTGTCTC.............................................................. 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCTC.............................................................. 23 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGT................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CGCTTTTCCGCCTAGGTG.................................................................. 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGT................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGTTGTCT............................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGC.................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCGCGTGACCT........................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................CCAAAACTGAGAACTGCAGG..................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCTT.......................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................ACTGCAGGAGACTTGGAGAGCAGAGA................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................AACCAAAACTGAGAACTGCAGGA.................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AGTTCCTCAGCTCGAGAGTGT................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................AAACCAAAACTGAGAACTGCA....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................ACCAAGAAAACCAAAACTGAGAACTGC........................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................AGGTGTCTCTCTCTCTCT..................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTCTCTCTCTA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAGGCG................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGCAGCGC.................................................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCT............................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCTCTC............................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CCGGAGAAGCGCGTGACCTGG......................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTG.................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCCT.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGATAAGC.................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................TTTTCCGCCTAGGTGTCTCTCC........................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................AAAACTGAGAACTGCAGGAGACTTGGA............................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................CTCCGGAGAAGCGCGTGACCTGACCC...................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCG................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGTTGTCTCTC............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TCCGGAGAAGCGCGTGACCTGAA........................................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTTCCTCAGCTCGAGAGTG.................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCTCT............................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCGCG................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTTTCTCTC............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GAGATACCTCCGGAGAAGC.................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................CGCTTTTCCGCCTAGGTGTC................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................AGAGATACCTCTGGAGAAGCG................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCG........................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAC..................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGCGA.................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................GAACTGCAGGAGACTTGGAGAGCAGAG.................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGG.................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCGC.................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................GGAGACTTGGAGAGCAGAGATA................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................TGTGAACTGCAGGACACATGG............................................................................................................................................. 21 3 6 0.83 5 2 0 0 0 0 1 0 0 0 0 0 0 2
.........................................GAACTGCAGGACACATGG............................................................................................................................................. 18 2 9 0.67 6 2 0 0 0 0 2 2 0 0 0 0 0 0
...................................................................................................................................................................TCCTGAGGTCGAGAGT..................... 16 2 20 0.50 10 0 0 0 0 0 0 0 0 0 0 4 6 0
.............................................TGCAGGACACTTGGGGAGCA....................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................CCGAGAACTGCAGCAGACTT............................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................GTGAACTGCAGGACACATGG............................................................................................................................................. 20 3 12 0.33 4 0 1 0 1 0 0 2 0 0 0 0 0 0
................................................................................GAGCGCGGGACCTGAACC...................................................................................................... 18 3 20 0.25 5 0 0 0 0 0 0 0 0 0 4 1 0 0
...............................................................................GGAGCGCGGGACCTGAACC...................................................................................................... 19 3 9 0.22 2 0 0 0 0 0 0 0 0 0 1 0 1 0
.................................................................................AGCGCGGGACCTGAACC...................................................................................................... 17 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................CTGTGAACTGCAGGACACA................................................................................................................................................ 19 3 20 0.15 3 1 0 0 2 0 0 0 0 0 0 0 0 0
.......................................GTGAACTGCAGGACACCTG.............................................................................................................................................. 19 3 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0
..............................................................................................................CGAACCCGTTTTCCCGCCTA...................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................TGTGAACTGCAGGACACT................................................................................................................................................ 18 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................TGTGAACTGCAGGACAC................................................................................................................................................. 17 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................AAGTAGCTCCGGAGAAGC.................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................AGTGTGAACTGCAGGACAC................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................AGCGCGGGACCTGAACCG..................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................GGAGGACCGAACCCGC................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CTTTTGGTTTTTTTTTTTTTGTGGTTCTTTTGGTTTTGACTCTTGACGTCCTCTGAACCTCTCGTCTCTATGGAGGCCTCTTCGCGCACTGGACTGGGGTCGTCCTCTTGGGTTGGGCGAAAAGGCGGATCCACAGAGAGAGAGAGAGAGTGAGATAGAGTCAAGGAGTCGAGCTCTCACACATAGAATGGGGCTCACAC

********************************************.((((...((((((.((((((((((.((((((((((.((..((((.......))))........)).))))))))))...)))))))))))))))).))))......************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934

dsim w501 ovaries

 SRR553487

NRT_0-2 hours eggs

 GSM343915

embryo

 M025

embryo
.....................TGGTTCTTTTGGTTTT................................................................................................................................................................... 16 0 2 0.50 1 0 1 0 0
.............TTTTTTTGAGGTTCTGTTGGT...................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0
...............................................................................................................GTTGTGCGAAAAAGCGGA....................................................................... 18 2 3 0.33 1 0 0 1 0
...........................................................................................................................................GAGAGAGAGAGTGAGAT............................................ 17 0 3 0.33 1 1 0 0 0
........................................................................................................................................AGAGAGAGAGAGAGTGAGA............................................. 19 0 17 0.06 1 0 0 1 0
.........TGTTTTTTTTTGTGCTTCTTTT......................................................................................................................................................................... 22 2 17 0.06 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 2l:12116723-12116922 - dsi-mir-967 Known_mirbase GAAAACC-------------AAAAAAA-AAA-A-----AACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TCTCTCTCTCTC--------ACT--CTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAGT--GTG
droSec2 scaffold_16:650994-651190 - dse_56 confident GAAAACC-------------AAAAAAAAAAA-A-----AACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TCTCTCTC--------------TCTCTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAGT--GTG
dm3 chr2L:12459963-12460153 - dme-mir-967 Known_mirbase AAAAACC------------GAA-AAAA--AA-A-----AACACTAAGAAAACCAAAAA-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------ACCT-----------------------AGGTGTCTC-TCTCTCTC--------------T--TTATCT--GTTCCT------CAGCTCGAG----------AGTGTGTATCTTT-CCCCGAGT--GTG
droEre2 scaffold_4929:12958907-12959115 + GAAAAGCGA-----AAACCGAA-AAAA--CG-A-----AAAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG------ATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAGCCCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TCACTCTCTCTC--------TCT--CTCTCTCTTCTCCT------CAGCCCGAG----------TGTGTGTATCTTT-CCCCGAAT--GTG
droYak3 2L:8897045-8897266 - dya_1807 GAAAACCGAAACCAAAACCGAA--------A-A-----AAAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGACGGAGACT-TGGAG-----AG------------------CAGAGACAGAGATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCA-------------------G-AACCCAACCCGCTTTTCC--------GCCT-----------------------AGATGTCTC-TATCTCGCTCTC--------CCT--CTCTCT--GTTCCTCTTGCACAGCTCGAG----------TGTGTGTATCTTT-CCCCGAGT--GTG
droEug1 scf7180000409122:844094-844271 - GAACAAA-------------A----AA---CACA---------------CATCGAAAC-----TGAGAACTGCAGAGGAGA------CT-TTGAGAAG--AG------------------AAGAG---------ATA-------------------------------------ACACTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGG-----------------C-AACCCAACCCGCTTCTCC-----AG-GCCA-----------------------AGAGGTCTCCTCTCTCTC--------------GCTCGCTCTCACTCCC--------------------------TGTGTTTTTCTCA-GACCAAGT--GTG
droBia1 scf7180000302422:507050-507210 + GAAAATC-------------A-----G----C----------------------AGGC-----TGAGAACTGCAG--GAGA------CT-CCGAG-----AG------------------GAGAG-CGGAGA-GATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCCCGA-GG-----------------GC-TGCCCAGCCCGCTTCTCC-----AGAGGGC-----------------------AGAGGTCGC-TCTCTGTG----------------------------CCT------CTGCC---G----------CGTGTGTATC--C-CCACGAGC--GTG
droTak1 scf7180000415865:119221-119370 + GAAAAAA-------------A----AC----C----------------------GAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------AAGAG---------CTA-------------------------------------TCTCTG----------------GAGAAGCGCGTGACCTGACCTGAG----------------------------AACCCGCTTCTCC-----AG--GGC-----------------------AGAGGTCTC-TCTCTATT----------------------------TCT------CAGACCGAG----------TGTGTGTATCTCCCCCTCGAGT--GTG
droEle1 scf7180000491028:2648335-2648512 + GAAAAAA-------------A----AA----C----------------------GAAC-----TGAGAACTGCAT--GGGACTGAGACT-TCGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCTCAGAAGG-----CACCAGCCAACCC-AATCCAACCCGCATCTCC-----------------------------------AGACGTCTC-TCTTT-------------------------------TCT------CCGCCCGAGTGTGTGTG-GTGTGTGTATCTCG-TCCCGAGT--GTG
droRho1 scf7180000780043:329347-329504 - GAAAAAA-------------A----AA----C----------------------GAAC-----TGAGAACTGCAT--GAGA------CT-TCGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCAG----------------GAGAAGCGCGTGACCTGACCCCAGAAGG-----CACCAG-----CC-AACCCAACCCGCTTCTCC-----GG--GGC-----------------------AGAGGTCTC-TCTTT-------------------------------TCT------GTG-----G----------TGTGTGTATCTCG-GCCCGAGT--GTG
droFic1 scf7180000454015:349245-349421 - GAAAAAA-------------A----AT----CAAAATCAAAGC------------GAC-----TGAGAACTGCAG--GAGA------CTTTCGAG-----AG------------------CAGGG---------ATAT------------------A-----------------TCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGT----------------AGCAACCCAGCCCGCTTCTCC-----GG-GCCA-----------------------AAAGGTCTC-TCTTTTCC--------------TTGCGGCCTTAAT------------------G----------TGTGTGTATCTCC-CCCCGAGA--GTG
droKik1 scf7180000302472:819802-820012 - GAAACCG-------------AAA-AAA---TAAA---------------AACC-GAAA-----TGAGAACTGCATATGAGA-TGA--TTTTCGAGAAGCGAGAAACGAGAAAACCGAGAGGAGAG---------ACGT------------------GTTTTTTGTTGTGAGATACCTCAGTTTAGGAGAAGGCAAAGAAAAGCGCGTGACCTGACCCCATGA-------------------A-AACCC--------TCTCC-----AC-------------------------------------------A------------------------------ACA------C--GCT--GTGTGTGTG-CTGTGTGTATCTCG-GCGAGAGTGTGTG
droAna3 scaffold_12916:12931155-12931336 + dan_4063 AAAAAAA-------------A----AA----A----------------------AAACTCATCCGAGAAATGCAT--GAGA------TT-TTGAG-----AG------------------GAGAG---------ATA-------------------------------------CCTC-------------------AGAAGCGCGTGACCTGACCCCGTCCGTCTGTCCATCTA-----TG-AACCCAACCCGCTTTTCT---CCAAACAC-CAGAGAGGAGGTCGAGAGTGACG---------------------------------------------------------------GTGTGTGTGAGTGTGTCTCTCTCCCCCTCAAGT--GTC
droBip1 scf7180000396580:589804-589961 - GAAAAAT-------------A----AA---TC------CAACCG-AGA-------ACA-----TGAGAAGTGCAT--GAGA------TT-TTGAG-----AG------------------GAGAG---------ACA-------------------------------------CCTC-------------------AGAGGCGCGTGACCTGACCCGT-CAG-----------------CG-AACCCAGCCCGCTTTTCT----------------------------------------CCTC-TCCTCT------------------------------CCT------C--TCCGGGTGTGTGTG--TATGTGTCTCTCC-CCTCAAGA--GTC
dp5 4_group3:3150540-3150765 - dps_3854 GAAAAAA-------------A----AACATT-C-----AAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------CT-TGGAG-----AG------------------AAGAG---------ATACCCACAAGAGGCAGGCAGTG------------A------AGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGG-------------CA---------CTCTGTAT----GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTGT--GTG
droPer2 scaffold_1:4633223-4633444 - dpe_2518 GAAAAAA-------------AAA---ACATT-C-----AAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------TT-TGGAG-----AG------------------AAGAG---------ATACCCACAAGAGACGGT-----------------------CCGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGG-------------CA---------CTCTGTAT----GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTGT--GTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAAAACC-------------AAAAAAA-AAA-A-----AACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TCTCTCTCTCTC--------ACT--CTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAGT--GTGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG.................................................................................................................................................................................................21178.00783828600411351000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAG...................................................................................................................................................................................................19153.00532922100100000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCC........................................................................................23117.0017102300000010100000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCT........................................................................................23114.001481210000000200000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCG...............................................................................................................................................................................................23113.001300003900000100000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGC..................................................................................................................................................................................................20112.001241000400002100000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-...........................................................................................20110.001063000100000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAA....................................................................................................................................................................................................18110.001000003610000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGT..............................................................................................................................................................................................2217.00700000110203000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTGTC..............................................................................................2116.00613000100000100000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TC.........................................................................................2216.00640000100000100000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGT................................................................................................................................................................................................2216.00620000020200000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGC................................................................................................................................................................................................2214.00400001100000200000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTGTCT.............................................................................................2214.00402000010001000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGA.....................................................................................................................................................................................................1714.00400000004000000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------GCCT-----------------------AGGTGTCTC-...........................................................................................2212.00200000200000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-...........................................................................................2312.00210000100000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGT.................................................................................................1812.00200000200000000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------GCCT-----------------------AGGTG................................................................................................1812.00200000200000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTGT...............................................................................................2011.00110000000000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGC..................................................................................................................................................................................................1811.00100000100000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCT.........................................................................................................................................................................................2711.00100100000000000000
...................................................CCAAAAC-----TGAGAACTGCAG--G...............................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCTT.......................................................................................2411.00100000000000100000
....................................................................ACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------A......................................................................................................................................................................................................................................................................2611.00100000000000001000
.................................................AACCAAAAC-----TGAGAACTGCAG--GA..............................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................AGTTCCT------CAGCTCGAG----------AGTGT......................2111.00100000100000000000
................................................AAACCAAAAC-----TGAGAACTGCA...................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.........................................ACCAAGAAAACCAAAAC-----TGAGAACTGC....................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
........................................................................................................................................................................................................................................................................................................AGGTGTCTC-TCTCTCTCT..................................................................................1811.00100001000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-T..........................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TC.........................................................................................2511.00100000100000000000
.................................................................................................................................................................................CCG----------------GAGAAGCGCGTGACCTGG.......................................................................................................................................................................................2111.00100100000000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTG................................................................................................1911.00100000100000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCCT.......................................................................................2411.00110000000000000000
...............................................................................................................................................................................................................................................................TTTTCC--------GCCT-----------------------AGGTGTCTC-TCC........................................................................................2211.00110000000000000000
.....................................................AAAAC-----TGAGAACTGCAG--GAGA------CT-TGGA...............................................................................................................................................................................................................................................................................................................2711.00100100000000000000
...............................................................................................................................................................................CTCCG----------------GAGAAGCGCGTGACCTGACCC....................................................................................................................................................................................2611.00100100000000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG.................................................................................................................................................................................................1911.00100010000000000000
................................................................................................................................................................................TCCG----------------GAGAAGCGCGTGACCTGAA......................................................................................................................................................................................2311.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................GTTCCT------CAGCTCGAG----------AGTG.......................1911.00110000000000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-T..........................................................................................2411.00100010000000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCG...............................................................................................................................................................................................2111.00100000000000100000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCCG----------------GAGAAGC..................................................................................................................................................................................................1911.00100010000000000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------GCCT-----------------------AGGTGTC..............................................................................................2011.00100001000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCG........................................................................................2311.00110000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAC...................................................................................................................................................................................................1911.00110000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGA................................................................................................................................................................................................2211.00100010000000000000
..................................................................GAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------.......................................................................................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGG..................................................................................................................................................................................................2011.00110000000000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGC................................................................................................................................................................................................2011.00100000100000000000
..........................................................................G--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------...............................................................................................................................................................................................................................2211.00100000000000001000
droSec2
GAAAACC-------------AAAAAAAAAAA-A-----AACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TCTCTCTC--------------TCTCTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAGT--GTGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG.................................................................................................................................................................................................211502.0050211217593122
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGC..................................................................................................................................................................................................201135.00135893628
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGT................................................................................................................................................................................................22133.003391419
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGC................................................................................................................................................................................................22125.002527133
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAG...................................................................................................................................................................................................19121.002141133
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGA................................................................................................................................................................................................22119.001911224
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCT........................................................................................23113.00136322
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCC........................................................................................23113.00134126
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-...........................................................................................20112.00122208
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-T..........................................................................................21111.00118102
..........................................................................................................................GAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG.................................................................................................................................................................................................20111.001111000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGTT...............................................................................................................................................................................................23110.00102503
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TC.........................................................................................22110.00102107
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCG...............................................................................................................................................................................................2319.0091530
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCT.................................................................................................................................................................................................2118.0084202
............................................................................................................................................................................................................................................................CGCTTTTCC--------GCCT-----------------------AGGTGTCT.............................................................................................2118.0081007
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCA........................................................................................2315.0053101
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCT.............................................................................................1914.0041003
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------GCCT-----------------------AGGTGTCT.............................................................................................2214.0040004
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGT..............................................................................................................................................................................................2213.0030300
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGT..................................................................................................................................................................................................2013.0031200
..........................................................................................................................GAG---------ATA-------------------------------------CCTCCG----------------GAGAAG...................................................................................................................................................................................................1813.0033000
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TCCA.......................................................................................2412.0021001
..............................................................................................................................................................................................................................................................CTTTTCC--------GCCT-----------------------AGGTGTCTC-TT.........................................................................................2212.0021001
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCA.................................................................................................................................................................................................2112.0020200
............................................................................................................................................................................................................................................................CGCTTTTCC--------GCCT-----------------------AGGTGTC..............................................................................................2012.0020002
............................................................................................................................G---------ATA-------------------------------------CCTCCG----------------GAGAAGCG.................................................................................................................................................................................................1812.0022000
........................................................................................................................CAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG.................................................................................................................................................................................................2212.0022000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAT...................................................................................................................................................................................................1911.0010100
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGC..................................................................................................................................................................................................1811.0010010
.............................................................................................................................................................................................................................................................GCTTTTCC--------GCCT-----------------------AGGTGTC..............................................................................................1911.0010010
.............................................................................................................................................................................................................................................................GCTTTTCC--------GCCT-----------------------AGGTGTCTC-T..........................................................................................2211.0011000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGTT.................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................................................................................................GCTTTTCC--------GCCT-----------------------AGGTGTCTC-...........................................................................................2111.0010010
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCCT................................................................................................................................................................................................2211.0010100
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAA....................................................................................................................................................................................................1811.0010001
..................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTATCTTA-CCCCGAGT--...2111.0010010
.....................................................................CTGCAG--GAGA------CT-TGGAG-----AG------------------C....................................................................................................................................................................................................................................................................................2011.0010010
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGT..............................................................................................................................................................................................2411.0010001
.............................................................................................................................................................................................................................................................GCTTTTCC--------GCCT-----------------------AGGTGTCT.............................................................................................2011.0010001
............................................................................................................................................................................................................................................................CGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TCT........................................................................................2511.0011000
...............................................................................................................................................................................................................................................................TTTTCC--------GCCT-----------------------AGGTGTCTC-TC.........................................................................................2111.0011000
.............................................................................................................................................................................................................................................................GCTTTTCC--------GCCT-----------------------AGGTGTCTC-TC.........................................................................................2311.0010001
...............................................................................................................................................................................................................................................................TTTTCC--------GCCT-----------------------AGGTGTCTC-T..........................................................................................2011.0011000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGTTT................................................................................................................................................................................................2211.0010100
.......................................................................GCAG--GAGA------CT-TGGAG-----AG------------------C....................................................................................................................................................................................................................................................................................1811.0010010
.....................AAAAAAAAAA-A-----AACACCAA...............................................................................................................................................................................................................................................................................................................................................................1960.1710001
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGTTT...................................................................................................................................................................................................1980.1310001
dm3
AAAAACC------------GAA-AAAA--AA-A-----AACACTAAGAAAACCAAAAA-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------ACCT-----------------------AGGTGTCTC-TCTCTCTC--------------T--TTATCT--GTTCCT------CAGCTCGAG----------AGTGTGTATCTTT-CCCCGAGT--GTGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCG.................................................................................................................................................................................................2111776.00177600002000000001000000000002510000001210001010112000100000000000000000000000000213010020330101011000000102551504000000000000117000010000000000000001000080200000001915524117260302040303431015404201200000000000000000000030195011177711611136631641944700002300023115031614173234511812634543734429390902114933313021186212332147755113610142398121610162452537156323561051110130
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGC................................................................................................................................................................................................221238.00238000000000000000000000000003000000000000000000010000000000100000000000000000000000000001100000000000002000000000000000100010200000000000000000000000100200300000500100000000001010010000004000000000000000000000000115101000000104150070000010101010202014015021120200010901000000000500021100501010000021100105212117210567911000102020100
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGATC..............................................................................................................................................................................................241203.00203000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012083000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------ACCT-----------------------AGGTGTCTC-TCT........................................................................................231111.00111000000010000000000000000001000000000020010000000000000000000000000000000000000010001303100100010000010040700000100001000000000010000000000000050000000000000000006000030000000001000000001000000000000000000000000304000002223422100600000000001001010110230200100021006001000000001100000001000100000000011000100100010000000000010000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGC..................................................................................................................................................................................................20187.0087000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000100020002050000000001000000100000000000000100100000003000000000300100110000000000110000001000000000000000000000000201000000000000012000000000010000000131220030001021011010030011002010010000010100000001000001412400111010000000021100
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCG...............................................................................................................................................................................................23154.00540000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000002300000000021002102000000000000000000000000001000000020000000010010110000010000000010000010010210104141100000000010200
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGT................................................................................................................................................................................................22141.0041000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000040011000000002100100000000001000000110101000000000001010000001002121000000200000000000000000011010020100300010200010
..............................................................................................................................................................................................................................................................CTTTTCC--------ACCT-----------------------AGGTGTCTC-T..........................................................................................21121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000000000000000000000000000001010000000100000000000000000000040000000100005001000000000000000000000000000000000000000000110000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAG...................................................................................................................................................................................................19119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000200000001000000021400000000000000000010000000000100000000000000000000000000000000000000000000001000020000000001000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGA................................................................................................................................................................................................22118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000040000000000000000012000000000000000000000100000000010020000000000000000000000000000000000000001000020100000000000020
............................................................................................................................................................................................................................................................CGCTTTTCC--------ACCT-----------------------AGGTGTCT.............................................................................................21118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000011100000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000002000030010000000003000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGT..............................................................................................................................................................................................22115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000020000000000010100000000000000000000000010010000000000000000001000000000000000000000000000000005000020000000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------ACCT-----------------------AGGTGTCTC-TCC........................................................................................23114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000012010400000000000000000000001000000000000000000000000000000000010000000000000000000010000000000000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------ACCT-----------------------AGGTGTCTC-TC.........................................................................................2219.009000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000100000000000000000000000000000000000000000000000000000000000010000000100000000001000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------ACCT-----------------------AGGTGTCT.............................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000100000010000000000000000000000001000010000000000000000000000100000000000010000000000
.............................................................................................................................................................................................................................................................GCTTTTCC--------ACCT-----------------------AGGTGTCTC-TCT........................................................................................2418.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GCTTTTCC--------ACCT-----------------------AGGTGTCTC-T..........................................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GCTTTTCC--------ACCT-----------------------AGGTGTCTC-TC.........................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GCTTTTCC--------ACCT-----------------------AGGTGTCT.............................................................................................2015.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000003000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------ACCT-----------------------AGGTGTCT.............................................................................................1915.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000010000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGAC...............................................................................................................................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCA...............................................................................................................................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000100001000000000000000
.............................................................................................................................................................................................................................................................GCTTTTCC--------ACCT-----------------------AGGTGTCTC-TCC........................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCT.................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000010000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGATC............................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------ACCT-----------------------AGGTGTC..............................................................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCC...............................................................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000
..............................................................................AGA------CT-TGGAG-----AG------------------CAGAG---------A......................................................................................................................................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000001000000000000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------ACCT-----------------------AGGTGTCTC-T..........................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------ACCT-----------------------AGGTGTCTC-...........................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................................................................................................CTTTTCC--------ACCT-----------------------AGGTGTCTC-...........................................................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................GCAG--GAGA------CT-TGGAG-----AG------------------C....................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000
........................................................................................T-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCT..........................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000
...............................................................TGAGAACTGCAG--GAGA------CT-TGG................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.............................................................................................................................................................................................................................................................GCTTTTCC--------ACCT-----------------------AGGTGTCTC-...........................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCATC...............................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGATC..............................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCG.................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCTG----------------GAGAAGCG.................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCA.................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCT...............................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAA....................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------ACCT-----------------------AGGTGTCTC-TCT........................................................................................2512.002000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TATCT--GTTCCT------CAGCTCGAG----------AGTGTG.....................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGC..............................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGT..............................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................CGCGTGACCTGACCCCAGCAGG----------------AG-AACC......................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CT--GTTCCT------CAGCTCGAG----------AGTG.......................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................AACTGCAG--GAGA------CT-TGGAG-----.........................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CT--GTTCCT------CAGCTCGAG----------AGTGTGTAT..................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................G--GAGA------CT-TGGAG-----AG------------------CAGAG---------ATA-------------------------------------...............................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................A-------------------------------------CCTCTG----------------GAGAAGCGCG...............................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AGGTGTCTC-TCTCTCTC--------------T--TT................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCTG----------------GAGAAGC..................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CAG--GAGA------CT-TGGAG-----AG------------------CA...................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCG.................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CTTTTCC--------ACCT-----------------------AGGTGTCTC-TCTCT......................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................G--GAGA------CT-TGGAG-----AG------------------CAGA.................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................GAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AA........................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------ACCT-----------------------AGGTGT...............................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AG--GAGA------CT-TGGAG-----AG------------------CAGA.................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCTC..............................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GCTTTTCC--------ACCT-----------------------AGGTGTCTC-TTC........................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TATCT--GTTCCT------CAGCTCGAG----------AGTG.......................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTG........................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCC.................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCTA................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGC................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................GAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAA...................................................................................................................................................3511.001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCAC..............................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATCT--GTTCCT------CAGCTCGAG----------A..........................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCTG----------------GA.......................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGA..............................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................GCGTGACCTGACCCCAGCA...............................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ACTGCAG--GAGA------CT-TGGAG-----.........................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------ACCT-----------------------AGGTGTC..............................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AA-----TGAGAACTGCAG--GAGA------CT-TGGAG-----.........................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCATC...............................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG---------.......................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAAAAGCGA-----AAACCGAA-AAAA--CG-A-----AAAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CAGAG------ATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAGCCCGCTTTTCC--------GCCT-----------------------AGGTGTCTC-TCACTCTCTCTC--------TCT--CTCTCTCTTCTCCT------CAGCCCGAG----------TGTGTGTATCTTT-CCCCGAAT--GTGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
................................................................GAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------CA...................................................................................................................................................................................................................................................................................2611.0010000100
...............................................................................GA------CT-TGGAG-----AG------------------CAGAG------ATGAT.....................................................................................................................................................................................................................................................................2111.0010000100
droYak3
GAAAACCGAAACCAAAACCGAA--------A-A-----AAAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGACGGAGACT-TGGAG-----AG------------------CAGAGACAGAGATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCA-------------------G-AACCCAACCCGCTTTTCC--------GCCT-----------------------AGATGTCTC-TATCTCGCTCTC--------CCT--CTCTCT--GTTCCTCTTGCACAGCTCGAG----------TGTGTGTATCTTT-CCCCGAGT--GTGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGT..............................................................................................................................................................................................2413.00300000030000
......................................................................................ACT-TGGAG-----AG------------------CAGAGACAGAGAT........................................................................................................................................................................................................................................................................2313.00301100010000
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAG...................................................................................................................................................................................................1912.00200000020000
......................................................................................ACT-TGGAG-----AG------------------CAGAGACAGAG..........................................................................................................................................................................................................................................................................2111.00110000000000
.......................................................................GCAG--GAGACGGAGACT-TGGAG-----AG------------------C....................................................................................................................................................................................................................................................................................2411.00100100000000
...................................................................................................................................ATGATA-------------------------------------CCTCTG----------------GAGAAGCGC................................................................................................................................................................................................2111.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................CGAG----------TGTGTGTATCTTT-CCCCGAGT--GT.2711.00100100000000
........................................................................................T-TGGAG-----AG------------------CAGAGACAGAGATGA......................................................................................................................................................................................................................................................................2311.00100010000000
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACC..........................................................................................................................................................................................2811.00100000010000
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAGCGC................................................................................................................................................................................................2211.00100000010000
...................................................................................................................................ATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTG.............................................................................................................................................................................................2411.00100000010000
.....................................................................................GACT-TGGAG-----AG------------------CAGAGAC..............................................................................................................................................................................................................................................................................1811.00100100000000
.............................................................................................................................................................................................................................................................................................................................................CTCT--GTTCCTCTTGCACAGCTCGA......................................2411.00100000010000
.................................................................................................................................................................................CTG----------------GAGAAGCGCGTGACCTG........................................................................................................................................................................................2011.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................CGAG----------TGTGTGTATCTTT-CCCCGA.......2311.00100000010000
.......................................................................................CT-TGGAG-----AG------------------CAGAGACAGA...........................................................................................................................................................................................................................................................................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATCTTT-CCCCGAGT--GT.2211.00100000010000
droEug1
GAACAAA-------------A----AA---CACA---------------CATCGAAAC-----TGAGAACTGCAGAGGAGA------CT-TTGAGAAG--AG------------------AAGAG---------ATA-------------------------------------ACACTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGG-----------------C-AACCCAACCCGCTTCTCC-----AG-GCCA-----------------------AGAGGTCTCCTCTCTCTC--------------GCTCGCTCTCACTCCC--------------------------TGTGTTTTTCTCA-GACCAAGT--GTGSizeHit CountTotal NormTotal
No Reads
droBia1
GAAAATC-------------A-----G----C----------------------AGGC-----TGAGAACTGCAG--GAGA------CT-CCGAG-----AG------------------GAGAG-CGGAGA-GATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCCCGA-GG-----------------GC-TGCCCAGCCCGCTTCTCC-----AGAGGGC-----------------------AGAGGTCGC-TCTCTGTG----------------------------CCT------CTGCC---G----------CGTGTGTATC--C-CCACGAGC--GTGSizeHit CountTotal NormTotal
No Reads
droTak1
GAAAAAA-------------A----AC----C----------------------GAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----AG------------------AAGAG---------CTA-------------------------------------TCTCTG----------------GAGAAGCGCGTGACCTGACCTGAG----------------------------AACCCGCTTCTCC-----AG--GGC-----------------------AGAGGTCTC-TCTCTATT----------------------------TCT------CAGACCGAG----------TGTGTGTATCTCCCCCTCGAGT--GTGSizeHit CountTotal NormTotal
No Reads
droEle1
GAAAAAA-------------A----AA----C----------------------GAAC-----TGAGAACTGCAT--GGGACTGAGACT-TCGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCTCAGAAGG-----CACCAGCCAACCC-AATCCAACCCGCATCTCC-----------------------------------AGACGTCTC-TCTTT-------------------------------TCT------CCGCCCGAGTGTGTGTG-GTGTGTGTATCTCG-TCCCGAGT--GTGSizeHit CountTotal NormTotal
No Reads
droRho1
GAAAAAA-------------A----AA----C----------------------GAAC-----TGAGAACTGCAT--GAGA------CT-TCGAG-----AG------------------CAGAG---------ATA-------------------------------------CCTCAG----------------GAGAAGCGCGTGACCTGACCCCAGAAGG-----CACCAG-----CC-AACCCAACCCGCTTCTCC-----GG--GGC-----------------------AGAGGTCTC-TCTTT-------------------------------TCT------GTG-----G----------TGTGTGTATCTCG-GCCCGAGT--GTGSizeHit CountTotal NormTotal
No Reads
droFic1
GAAAAAA-------------A----AT----CAAAATCAAAGC------------GAC-----TGAGAACTGCAG--GAGA------CTTTCGAG-----AG------------------CAGGG---------ATAT------------------A-----------------TCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGT----------------AGCAACCCAGCCCGCTTCTCC-----GG-GCCA-----------------------AAAGGTCTC-TCTTTTCC--------------TTGCGGCCTTAAT------------------G----------TGTGTGTATCTCC-CCCCGAGA--GTGSizeHit CountTotal NormTotal
No Reads
droKik1
GAAACCG-------------AAA-AAA---TAAA---------------AACC-GAAA-----TGAGAACTGCATATGAGA-TGA--TTTTCGAGAAGCGAGAAACGAGAAAACCGAGAGGAGAG---------ACGT------------------GTTTTTTGTTGTGAGATACCTCAGTTTAGGAGAAGGCAAAGAAAAGCGCGTGACCTGACCCCATGA-------------------A-AACCC--------TCTCC-----AC-------------------------------------------A------------------------------ACA------C--GCT--GTGTGTGTG-CTGTGTGTATCTCG-GCGAGAGTGTGTGSizeHit CountTotal NormTotal
No Reads
droAna3
AAAAAAA-------------A----AA----A----------------------AAACTCATCCGAGAAATGCAT--GAGA------TT-TTGAG-----AG------------------GAGAG---------ATA-------------------------------------CCTC-------------------AGAAGCGCGTGACCTGACCCCGTCCGTCTGTCCATCTA-----TG-AACCCAACCCGCTTTTCT---CCAAACAC-CAGAGAGGAGGTCGAGAGTGACG---------------------------------------------------------------GTGTGTGTGAGTGTGTCTCTCTCCCCCTCAAGT--GTCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................................................................................................................................................CAC-CAGAGAGGAGGTCGAGAGTG........................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................C-CAGAGAGGAGGTCGAGA...........................................................................................................1811.001010000
.......................................................................................................................................................................................................AAGCGCGTGACCTGACCCCGTCC...............................................................................................................................................................................2311.001010000
..........................................................................................................................GAG---------ATA-------------------------------------CCTC-------------------AGAAGCGCGT..............................................................................................................................................................................................2011.001000001
...............................................................................GA------TT-TTGAG-----AG------------------GAGAG---------ATA-------------------------------------CCT............................................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................................................................................................................CT---CCAAACAC-CAGAGAGGAGGT................................................................................................................2211.001000010
...................................................................................................................................................................................................................................................................................................TGACG---------------------------------------------------------------GTGTGTGTGAGTGTGTCTCTCT................2711.001000001
droBip1
GAAAAAT-------------A----AA---TC------CAACCG-AGA-------ACA-----TGAGAAGTGCAT--GAGA------TT-TTGAG-----AG------------------GAGAG---------ACA-------------------------------------CCTC-------------------AGAGGCGCGTGACCTGACCCGT-CAG-----------------CG-AACCCAGCCCGCTTTTCT----------------------------------------CCTC-TCCTCT------------------------------CCT------C--TCCGGGTGTGTGTG--TATGTGTCTCTCC-CCTCAAGA--GTCSizeHit CountTotal NormTotal
No Reads
dp5
GAAAAAA-------------A----AACATT-C-----AAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------CT-TGGAG-----AG------------------AAGAG---------ATACCCACAAGAGGCAGGCAGTG------------A------AGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGG-------------CA---------CTCTGTAT----GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTGT--GTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................................................................................................................................................AACCCAACCCGGTTCTGTTCTCCAGT................................................................................................................................2611.0010010000000
..AAAAA-------------A----AACATT-C-----AAAACGAGAAAGA..........................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
..........................................................................................................................................................GTG------------A------AGTG---GAGTGGAGGGAGC.........................................................................................................................................................................................................2111.0010010000000
.......................................................AAT-----TGAGAACTGCAT--GAGA------......................................................................................................................................................................................................................................................................................................................1911.0010000100000
................................................................................................................................................................................................................................................................................................................................TATGTAC------------CCTCCT------TCGCTC---------------C........................2011.0010000100000
.......................................................................................................................................................GCAGTG------------A------AGTG---GAGTGGAGGGAGC.........................................................................................................................................................................................................2411.0010000100000
.........................................................................................................................................................................................................................CAAGAC-----------------CG-AACCCAACCCGGTT............................................................................................................................................2211.0010010000000
droPer2
GAAAAAA-------------AAA---ACATT-C-----AAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------TT-TGGAG-----AG------------------AAGAG---------ATACCCACAAGAGACGGT-----------------------CCGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGG-------------CA---------CTCTGTAT----GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTGT--GTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................................................................................................................................................................................................................................T------TCGCTC---------------CCTGTATGCGT-GCACGTGT--...2611.001010000
.....................................................................................................................................................GGT-----------------------CCGTG---GAGTGGAGGGAGC.........................................................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................GAGAAGCGCGTGACCTGACCC....................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................CGAGAAGCGCGTGACCTGACCCCAAGAC-----------------C............................................................................................................................................................2911.001100000

Generated: 10/20/2015 at 11:25 PM