ID:

dsi-mir-964

 Coordinate:

2l:5446862-5446953 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

antisense_to_intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.4 -27.0

Flybase annnotation

Antisense to intron [2l_5446685_5450164_-]; utr5 [utr5_plus_813]

No Repeatable elements found

Sense Strand Reads

GCATCTTCTAGTGGGTAAATCCATGTGGTTATGACAAGTCAATCAAAATCTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGTTTTTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATCAAAACTTCAACTTCATTTTGTAATACTTTGAAGATCATATTGGTTAAACAAAA

**************************************************(((((((((.(((.((((((((((.((...((((((((.............))))))))...)).)))))))))).))).)))..)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009

testis

 O001

Testis

 M024

male body		 SRR553486

Makindu_3 day-old ovaries

 SRR618934

dsim w501 ovaries

 SRR553485

Chicharo_3 day-old ovaries

 SRR902008

ovaries

 M025

embryo

 O002

Head

 M053

female body

 GSM343915

embryo

 M023

head

 SRR553488

RT_0-2 hours eggs
.................................................................TTAGAATAGGGGAGCTTAACTT......................................................................................................... 22 0 1 19654.00 19654 18816 592 94 20 70 3 41 2 8 6 2 0 0
.................................................................TTAGAATAGGGGAGCTTAACT.......................................................................................................... 21 0 1 9383.00 9383 8845 24 151 207 33 86 19 12 0 4 2 0 0
.................................................................TTAGAATAGGGGAGCTTAAC........................................................................................................... 20 0 1 995.00 995 713 227 15 25 2 7 3 0 3 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTT........................................................................................................ 23 1 1 437.00 437 420 0 15 0 0 1 0 0 0 1 0 0 0
.................................................................TTAGAATAGGGGAGCTTAA............................................................................................................ 19 0 1 384.00 384 160 218 0 4 0 0 0 0 2 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGAC................................................................. 22 0 1 341.00 341 1 46 250 6 2 5 0 25 1 0 1 4 0
.................................................................TTAGAATAGGGGAGCTTA............................................................................................................. 18 0 1 66.00 66 1 61 0 1 2 0 0 0 1 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACA.......................................................................................................... 21 1 1 56.00 56 56 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACTT......................................................................................................... 21 0 1 52.00 52 40 10 0 0 1 0 0 0 1 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTA......................................................................................................... 22 1 1 49.00 49 46 0 2 0 1 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACTTG........................................................................................................ 22 0 1 43.00 43 34 7 0 0 1 1 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAAA........................................................................................................... 20 1 1 42.00 42 42 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTCTAAGA.................................................................. 22 0 1 33.00 33 7 1 4 10 0 10 1 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTTT....................................................................................................... 24 1 1 32.00 32 31 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACT.......................................................................................................... 20 0 1 25.00 25 15 2 1 5 0 1 0 0 0 0 0 0 1
.................................................................TTAGAATAGGGGGGCTTAACTT......................................................................................................... 22 1 1 21.00 21 20 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTCTAAG................................................................... 21 0 1 20.00 20 10 6 4 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGA.................................................................. 21 0 1 19.00 19 4 5 3 3 0 2 0 1 0 0 1 0 0
.................................................................TTAGAATAGGGGTGCTTAACTT......................................................................................................... 22 1 1 18.00 18 18 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTCTAAGAC................................................................. 23 0 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGCGCTTAACTT......................................................................................................... 22 1 1 15.00 15 15 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGGGCTTAACT.......................................................................................................... 21 1 1 13.00 13 12 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................TAAAAGCCACTGTTCTAAGAC................................................................. 21 0 1 12.00 12 0 2 10 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAG................................................................... 20 0 1 12.00 12 0 11 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAGCTT......................................................................................................... 22 1 1 11.00 11 10 0 1 0 0 0 0 0 0 0 0 0 0
...............................................ATCTTGGTCCAACTTGCC............................................................................................................................... 18 0 1 11.00 11 0 2 5 0 1 0 0 3 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTA........................................................................................................ 23 1 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAAATT......................................................................................................... 22 1 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACC.......................................................................................................... 21 1 1 9.00 9 2 0 6 0 1 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTCTAA.................................................................... 20 0 1 9.00 9 8 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTA..................................................................... 18 0 1 8.00 8 0 8 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAATTT......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACCT......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGAGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAAAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGCGCTTAACT.......................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAA............................................................................................................ 18 0 1 7.00 7 0 7 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TAAAAGCCACTGTTCTAAGACA................................................................ 22 0 1 6.00 6 1 2 3 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAA.................................................................... 19 0 1 6.00 6 0 6 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAGTAGGGGAGCTTAACTT......................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTCTA..................................................................... 19 0 1 6.00 6 1 5 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGTGGAGCTTAACTT......................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGGATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGATCTTAACTT......................................................................................................... 22 1 1 5.00 5 4 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................TTGGAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 5.00 5 3 0 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAAGGGAGCTTAACTT......................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTG......................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTACAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGTGCTTAACT.......................................................................................................... 21 1 1 5.00 5 4 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................TTAGAATAGGGGAGCTTAAAA.......................................................................................................... 21 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAGCT.......................................................................................................... 21 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAAC........................................................................................................... 19 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGTGGAGCTTAACT.......................................................................................................... 21 1 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGACA................................................................ 23 0 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACAT......................................................................................................... 22 1 1 4.00 4 3 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................GAATAGGGGAGCTTAACTT......................................................................................................... 19 0 1 4.00 4 0 1 0 0 3 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGATTAACT.......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAAAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGATCTTAACT.......................................................................................................... 21 1 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATATGGGAGCTTAACT.......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGAAGCTTAACTT......................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGATTAACTT......................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACGT......................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTTT............................................................................................................ 19 2 2 4.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTAA........................................................................................................ 23 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAAAC................................................................. 22 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTT............................................................................................................. 18 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 4.00 4 3 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTG........................................................................................................ 23 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGTTTAACT.......................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTAGAATAGGGGAGCTTAACT.......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGTGAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGAGAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAATT.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGGC................................................................. 22 1 1 3.00 3 0 0 2 0 0 0 0 0 0 0 0 1 0
.................................................................TTAGAATAGGGGAGCTTAACTTTTT...................................................................................................... 25 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TCAGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAAT........................................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACG.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGAGGAGCTTAACT.......................................................................................................... 21 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCGTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGACT................................................................ 23 1 1 3.00 3 0 0 2 0 0 1 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGACCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGTTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGTAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TACAATAGGGGAGCTTAACT.......................................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGAATAGGGGAGCTTAACT.......................................................................................................... 22 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................TGAGAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAACTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTATAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTAA....................................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAAGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAACTTAACT.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATATGGGAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTC......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTTA....................................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACAA......................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTCT...................................................................... 18 0 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTTGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATGGGGGAGCTTAACTT......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAAGGGAGCTTAACT.......................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCT............................................................................................................... 16 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGACCTTAACT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAAAT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TTAAATAGGGGAGCTTAACTT......................................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTATCT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTCAACT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TAAAAGCCACTGTTCTAAG................................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTAAA...................................................................................................... 25 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGTAGCTTAACT.......................................................................................................... 21 1 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................TTAGATTAGGGGAGCTTAACT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTAGAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATACGGGAGCTTAACTT......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGAATAGGGGAGCTTAACTT......................................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAATTA......................................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAGTAGGGGAGCTTAACT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTCTAAGAA................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGAATAGGGGAGCTTAACT.......................................................................................................... 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................CTAGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACTTT........................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTAAA....................................................................................................... 24 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGCAGCTTAACTT......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TAAAAGCCACTGTTCTAAGA.................................................................. 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTCAACTT......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACTTTT....................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTT.............................................................................................................. 17 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................TTAGATTAGGGGAGCTTAACTT......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAGTAGGGGAGCGTAACT.......................................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTTTAGAATAGGGGAGCTTAAC........................................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAACCCACTGTTCTAAGAC................................................................. 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................................TTAGATAGGGGAGCTTAACTT......................................................................................................... 21 3 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTTTAAGA.................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................TTAGAGTAGGGGAGCATAACTT......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTTTAGGGGAGCTTAACTT......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATCGGGGAGCTTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AATCTTGGTCCAACTAGCC............................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................TTAGAATAGGGGAACTTAA............................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTCACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTGGGC..................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGCATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTAT....................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTC........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGAATAGGGGAGCTTAGCTT......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACG.......................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGAA................................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................TTGGAATAGGGGAGCTTAACTTT........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATGGGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTATAATAGGGGAGCTTAACTTT........................................................................................................ 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTAGACTAGGGGAGCATAACT.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGTTAAAAGCCACTGTTC....................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................GTAGAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACAGTTCTAAGACA................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAACAGGGGAGCTTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGACTAGGGGAGCTTAACTTT........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTATC........................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATACGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................ATTAGAATAGGGGAGCTTAACTAA........................................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACTTAA....................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGG.................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGAAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACCTT........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTATAATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTGG........................................................................................................ 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................TAAAAGCCACTGTTCTAAGACC................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................TTAGAATAGCGGAGCTTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTTTA...................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTTAAT.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTTACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATGGGGGAGCTTAACTTT........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTATCTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCCTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGACC................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGGTCTAAGAC................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................ATAGAATAGGGGAGCTTAAC........................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TAAGAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGATTAAC........................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTTAA...................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGTTAAAAGCCACTGTTCTAA.................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAAAAGGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGTGCTTAACTTT........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGAGAATAGGGGAGCTT.............................................................................................................. 17 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................AGAATAGGGGAGCTTAACTTTT....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTAGAATAGGGGAGCTTAAC........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAGAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGGATAGGGGAGCTTAA............................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TAAAAGCCACTGTTCTAAGACT................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTTGAATAGGGGAGCTTAAC........................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTGACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTGGC...................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATAGGGGAGCTTAAC........................................................................................................... 15 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTAGC....................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGTTAAAAGCCACTGTTCTA..................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTCGAATAGGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAACAGGGGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGC................................................................................................................ 15 0 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAAGT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTAGC...................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGAATAGGGCAGCTTAACT.......................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACAGC........................................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTAATAGGGGAGCTTAACT.......................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTAAAAGCCACTGTTTAA..................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGCAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGAATAGGGGAGCTTAACTT......................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGTTTAACA.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAAATTTT....................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTAGAATAGGGGAGCTTAACTT......................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAGTAGGGGAGCGTAACTT......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGATTAGGGGAGCATAACT.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAACTTGAA...................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGAATAGGGGAGCTTACCTT......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTACCT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTAAAAGCCACTGTTCTAAGT.................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGAAGCTTAAC........................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTAGAATAGGGGAGCTTAACT.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGAGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAACTTTTTT..................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAAGAGGGGAGCTTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGAATAGGGGAGCTTAATT.......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTAAAA........................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGCATAGGGGAGCTTAACTT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGTGAGCTTAACT.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTAGAATAGGGGAGCTTA............................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ATCGTGGTCCAACTTGCC............................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................AATCTTGGTCCAACTTGCC............................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................TTAGAATAGGGGAGCTTTTA........................................................................................................... 20 3 6 0.67 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCGTAA............................................................................................................ 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CTGATCTTGTGTTTTTTATGTTT.......................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................TTAGAATAGGGGGGCTTAACAA......................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATAGGGGAGCTTAAAAA......................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TTATAGGGGAGCTTAACTT......................................................................................................... 19 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TTAGATAGGGGAGCTTAACT.......................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAATGGGGGAGC................................................................................................................ 15 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTAGGATAGGGGAGCTTTT............................................................................................................ 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................ATTTGACGATCAAAA................................................. 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGTAGAAGATCACCCATTTAGGTACACCAATACTGTTCAGTTAGTTTTAGAACCAGGTTGAACGGAATCTTATCCCCTCGAATTGAACACAAAAATTACAAATTCAATTTTCGGTGACAAGATTCTGTTAAACTACTAGTTTTGAAGTTGAAGTAAAACATTATGAAACTTCTAGTATAACCAATTTGTTTT

**************************************************(((((((((.(((.((((((((((.((...((((((((.............))))))))...)).)))))))))).))).)))..)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486

Makindu_3 day-old ovaries

 SRR618934

dsim w501 ovaries

 SRR902009

testis

 M023

head

 M024

male body		 SRR553488

RT_0-2 hours eggs
...................................................ACCAGGCTGAACGGA.............................................................................................................................. 15 1 4 0.25 1 1 0 0 0 0 0
...................................................................................................................................ACTCCTAGTTTGGAAGTT........................................... 18 2 7 0.14 1 0 1 0 0 0 0
.......................ACGCCAATACGGTTCAATTA..................................................................................................................................................... 20 3 8 0.13 1 0 0 1 0 0 0
............................................................................CTCGAATTGAAGACACAA.................................................................................................. 18 2 10 0.10 1 0 0 0 1 0 0
...........................................................................CTTCGAATTGAAGACACAA.................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0
...............................................................................AAATTGAACACAAGAATT............................................................................................... 18 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 2l:5446812-5447003 + dsi-mir-964 Known_mirbase GCATCTTCTAG-------------------------TGGGTAA---ATCCAT--GTGG------T------TATGACAAGTCAATCAAAAT----CTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGTTT--TTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATCAAAAC-TTCA------------ACTTCATTTTGTAATACTTTGAAGATCATATTGGTTAAAC-------------------------------------------------------AAAA
droSec2 scaffold_5:3719799-3719992 + dse_44 confident GCATCTTCTAG-------------------------TGGGTAA---ATCCAT--GTGG------T------TATGATAAGTCAATCAAAAT----CTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGTTT--TTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATCAAAAC-CACCTGACAAAAAAATACTTCGT----------TTTAAAGCTAATAATGGTTACAC-------------------------------------------------------AAAA
dm3 chr2L:5642081-5642241 + dme-mir-964 Known_mirbase GCGTCTTCTAG-------------------------TTGGT--GA----------------------------T-----ACCAATA-ACAT----ATTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTATGTTT--TTGATGTTTAAGTTAAAAGCCTCTGTTCTAAGACAATTTGATGATCAAAAC-AGCC----GGAGAAATACTTCAT--------------------ATAATGGTTACAA-------------------------------------------------------CAAA
droEre2 scaffold_4929:5730477-5730642 + der_29 confident GCATCTTCTAG-------------------------TTGGT--TACATCCTT--GCGT------T------AGTGATCAATCAATA-ACGT----TTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTGTGTGT--GTTATGCTTAAGTTAAGAGCCTTTATTCTAAGTCAATTCGACTGCCAACTC-TGCG--------------------------------------CATTATGGTTACGA-------------------------------------------------------AGAA
droYak3 2L:13551019-13551197 - dya_32 confident GCATCTTCAAG-TTAT------------------------------ATCC---------------------TATGATCAATCAATG-AAAT----CTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTATGTAT--ATCATGTATAAGTTAAGAACCTTTATTCTAAGACAATTCGACTACAAAATC-AACT----GAAAAACTACTTCAACTTGTTTTATTTTGAAACTTAT----------T-------------------------------------------------------AGAA
droEug1 scf7180000409063:318431-318569 + GCACCCCT-CG-------------------------AAAGT--AA--TACTCGAGCAA------TACCAGTAATAA----------TAATC----CGAGGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGTAC--GCAATGTTTAAGTTA-GATCCTTTTTTCTAAGATAATTCGGCTGTCAGAAC--------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302422:3831763-3831908 + GCAACTTCTCA-------------------------ATAGC--TA--TGCAT--GCTGCAA---T------GGCGATAAACTGATAAAACC----GACTGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGTGT--GCCGATTTTAAGTTAAGAGCCTTTTTTCTAAGATAATCCGACTATCAAAAC--------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415871:386448-386689 + GCAACTCCTCC-------------------------TAAGT--TA--TGCAT--GCTA------T------TGCGCCAAATTAATATAAAC----CGAGGTCTAACTTGTCTTAGAATAGGGGAGCTTAACTTATGTAG--GTCATGTTTAAGTTAAGAGCCTTTTTTCTAAGATAATTCGACTATCGTAAC-AACGTGCTGATTGAGTATTATGA---GT-----TTTACGAG--------TATTTATGAGTATTATGAATTTCAAATTTGAAGCGATATGATACGACTGTAATGATTTAATTTAAT
droEle1 scf7180000490753:31689-31875 + CCAGCTCCAAC-------------------------AAAGT--AA--CTATC-----G------T------TTTGTCAAATTATTTAAACC----AGAGGTCATACTTGCCTTAGAATAGGGGAGCTTGACTTATGTGC--GTTATGTTTAAGTTAAGAGCCTTAATTCTAAGATAATTCGACTATCAAAAC-AGCATGC-------------TATTTTGTATATATCAAATCAAAATGTTTTTTTTAC-------------------------------------------------------AGAG
droRho1 scf7180000761061:142-282 + CCAACTCCACC-------------------------ATAATAA---ATTATT--GT---------------GTTGCCAAATTATTCAAGCC----CAAGGTCATACTTGCCTTAGAATAGGGGAGCTTAACTTATGTTC--GTTGTGTTTAAGTTAAGAGCCTTGATTCTAAGATAATTCGACCATCAAAAC--------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453932:196457-196610 - GCAACGCCACT-CTAA---T----------------TAAA-ATA---ATCA---GTCC---------CAGTAATGAGAATCCATCTCAGCC----CAATGGCGAACTTGTCTTAGAATAGGGGAGCTTAACTTGGAA-T--CTTGTGTTGAAGTTAAGAGCCATAATTCTAAGACAATTCGACCATAAAATC-AACA--------------------------------------------------------------------------------------------------------------A
droKik1 scf7180000302389:430204-430333 - GCAACTCTAAC-------------------------CCACAAG---AGTTTG--AG-G---TGGA------AAAGGTAATTCAGA-----CAGAGATAAGTCAGACTTGTCTTAGAATAGGGGAGCTTAACTTATGTGG--CAGATATTTAAGTTAAGAGCCTTAATTCTAAGACAA-----------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:11085540-11085689 + dan_35 confident GCTACTAAGAA-------------------------TACGAGT---GTTCGC--GGGA------T---------GAGCATC------GAAT----CAAAGTCAAACTTGTTTTAGAATAGGGGAGCTTAACTTATTGGAGAGTTGATATTAAGTTAAGATCCCTAATTCTAAGATAATGTGACCATTAATGC-AACG---------------TTGTTTTA---------------------------------------------------------------------------------------T
droBip1 scf7180000396572:743304-743438 + GCTACACAGAT-------------------------AAAA-GTG---TTCAT--CGGA----------------AAGAATCCA------TC----AAAAGTCACACTTGTTTTAGAATAGGGGAGCTTGACTTGTTAAAGAGTTGATATAAAGTTAAGATCCTTTATTCTAAGATAATGTGACCATTATAGC--------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_10:2200404-2200543 - dpe_297 confident TCCCCGTG-------------------------------------------------------------------CCAA-----------A----TAGAGCCAAAATTATCTTAGATCGAAGGTTCCTGGCTTACAGGG--ATTTGATGTAAGTTAAGAACCTCCGCTCTAAGCTAGTATGGCTATCATCAACGGCC----CTGAAAGTACTACAA-----------------G--------TGTGTGC-------------------------------------------------------AAAA
droWil2 scf2_1100000004521:8624944-8625077 - GTTTTCTTTAA-------------------------GCCCAAC---ACATTT--GTTG------T--C---TGTGTC-AGTTGA------A----CAAGGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATATTG--TTTTGCTTAAAGTTAAGAGCCTCAATTCTAAGATAATGCGACTATCA------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:3616451-3616573 + dvi-mir-964 Known_mirbase ACATGTTTCAA-------------------------A-AGT--T---TTCAT--ATTG-----------------AAAATACA------------TTAAGTTTAACTTATCTTAGAATAGGGGAGCTTAACTT-TGTAT--G-AACATTTAAGCTAAGAGCCTCAATTCTTAGATAATGCGACTAACAA-----------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:14019472-14019608 + dmo_33 confident CCATAAATATT--GATATATGATGATGATTTTCCAATTG-----------------TG----------------ATGAAATCA------------TTGAGTTCAACTTATCTTAGAATAGGGGAGCTTAACTTAAT--C--TGAACACTCAAGCTAAGAGCCTCGATTCTTCGATAATGCGACTAACA------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:3148284-3148415 + ATCTCATTAAAATCAT---------------TTCAGTTGAT------------------------------TAGAAGAGTGCA------------TTATGTCAAACTTATCTTAGAATAGGGGAGCTTAACTTTTATCATATTAGCGCTCGAGCTAAGATCCTCAATTCTTGGATAAGGCGACTAGCAA-----------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCATCTTCTAG-------------------------TGGGTAA---ATCCAT--GTGG------T------TATGACAAGTCAATCAAAAT----CTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGTTT--TTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATCAAAAC-TTCA------------ACTTCATTTTGTAATACTTTGAAGATCATATTGGTTAAAC-------------------------------------------------------AAAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................22119654.0019654094265928320007024118816000
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2119383.00938301511242408620700332198845000
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................201995.0099501500227372500203713000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................231437.0043701501001000000420000
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................191384.00384000021820400000160000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGAC.....................................................................................................................................221341.00341425025046156002101000
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................18166.0066000061101002001000
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................21156.0056000000000000056000
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................21152.00520000101000010040000
...............................................................................................................TTAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................22149.0049020000000010046000
................................................................................................................TAGAATAGGGGAGCTTAACTTG..............................................................................................................................................................................22143.0043000070100010034000
...............................................................................................................TTAGAATAGGGGAGCTTAAA.................................................................................................................................................................................20142.0042000000000000042000
........................................................................................................................................................GTTAAAAGCCACTGTTCTAAGA......................................................................................................................................22133.00330400101010000017000
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................20125.0025010020150100015000
........................................................................................................................................................GTTAAAAGCCACTGTTCTAAG.......................................................................................................................................21120.0020040060000000010000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGA......................................................................................................................................21119.001903105023000104000
........................................................................................................................................................GTTAAAAGCCACTGTTCTAAGAC.....................................................................................................................................23116.0016000016000000000000
..........................................................................................................................................................TAAAAGCCACTGTTCTAAGAC.....................................................................................................................................21112.0012010002000000000000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAG.......................................................................................................................................20112.0012000011000001000000
.........................................................................................AT----CTTGGTCCAACTTGCC.....................................................................................................................................................................................................18111.001105302000001000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................23110.0010000000000000010000
...............................................................................................................TTAGAATAGGGGAGCTTAACC................................................................................................................................................................................2119.00906000000001002000
........................................................................................................................................................GTTAAAAGCCACTGTTCTAA........................................................................................................................................2019.00900001000000008000
.........................................................................................................................................................TTAAAAGCCACTGTTCTA.........................................................................................................................................1818.00800008000000000000
................................................................................................................TAGAATAGGGGAGCTTAA..................................................................................................................................................................................1817.00700007000000000000
..........................................................................................................................................................TAAAAGCCACTGTTCTAAGACA....................................................................................................................................2216.00603002000000001000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAA........................................................................................................................................1916.00600006000000000000
........................................................................................................................................................GTTAAAAGCCACTGTTCTA.........................................................................................................................................1916.00600005000000001000
...............................................................................................................TTAGAATAGGGGAGCTTAACTG...............................................................................................................................................................................2215.00500000000000005000
...............................................................................................................TTAGAATAGGGGAGCTTAAAA................................................................................................................................................................................2115.00500000000000005000
................................................................................................................TAGAATAGGGGAGCTTAAC.................................................................................................................................................................................1915.00500005000000000000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGACA....................................................................................................................................2314.00402002000000000000
..................................................................................................................GAATAGGGGAGCTTAACTT...............................................................................................................................................................................1914.00400001000003000000
...............................................................................................................TTAGAATAGGGGAGCTTTT..................................................................................................................................................................................1924.00800000000000008000
...............................................................................................................TTAGAATAGGGGAGCTTAACTAA..............................................................................................................................................................................2314.00400000000000004000
...............................................................................................................TTAGAATAGGGGAGCTTT...................................................................................................................................................................................1814.00400000000000004000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTG..............................................................................................................................................................................2314.00400001000000003000
...............................................................................................................TTAGAATAGGGGAGCTTAAT.................................................................................................................................................................................2013.00300000000000003000
...............................................................................................................TTAGAATAGGGGAGCTTAACG................................................................................................................................................................................2113.00300000000000003000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGACT....................................................................................................................................2313.00302000010000000000
..............................................................................................................CTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2213.00300000001000002000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTAA.............................................................................................................................................................................2413.00300000000000003000
...............................................................................................................TTAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................2213.00300000000000003000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTA.............................................................................................................................................................................2413.00300000000000003000
...............................................................................................................TTAGAATAGGGGAGCTTAACAA...............................................................................................................................................................................2213.00300000000000003000
........................................................................................................................................................GTTAAAAGCCACTGTTCT..........................................................................................................................................1813.00300002000001000000
...............................................................................................................TTAGAATAGGGGAGCT.....................................................................................................................................................................................1613.00300000000003000000
..........................................................................................................................................................TAAAAGCCACTGTTCTAAG.......................................................................................................................................1912.00200002000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTAAA............................................................................................................................................................................2512.00200000000000002000
.................................................................................................................AGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2012.00200001000000001000
........................................................................................................................................................GTTAAAAGCCACTGTTCTAAGAA.....................................................................................................................................2312.00200000000000002000
.................................................................................................................AGAATAGGGGAGCTTAACT................................................................................................................................................................................1912.00200000000001001000
................................................................................................................TAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2212.00200000000000002000
...............................................................................................................TTAGAATAGGGGAGCTTAACTAAA.............................................................................................................................................................................2412.00200000000000002000
..........................................................................................................................................................TAAAAGCCACTGTTCTAAGA......................................................................................................................................2012.00200001000000001000
...............................................................................................................TTAGAATAGGGGAGCTT....................................................................................................................................................................................1712.00200000000002000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................2311.00100000000000001000
................................................................................................................TAGAATAGGGGAGCTTAACG................................................................................................................................................................................2011.00101000000000000000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGAA.....................................................................................................................................2211.00100000010000000000
.......................................................................................................................................................AGTTAAAAGCCACTGTTC...........................................................................................................................................1811.00100001000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTTAA.............................................................................................................................................................................2311.00100000000000001000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGG......................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................TAAAAGCCACTGTTCTAAGACC....................................................................................................................................2211.00100000000000100000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGACC....................................................................................................................................2311.00101000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTAA............................................................................................................................................................................2511.00100000000000001000
.......................................................................................................................................................AGTTAAAAGCCACTGTTCTAA........................................................................................................................................2111.00100000000000001000
..........................................................................................................................................................TAAAAGCCACTGTTCTAAGACT....................................................................................................................................2211.00101000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTGGC............................................................................................................................................................................2511.00100000000000001000
....................................................................................................................ATAGGGGAGCTTAAC.................................................................................................................................................................................1511.00100000000001000000
.......................................................................................................................................................AGTTAAAAGCCACTGTTCTA.........................................................................................................................................2011.00100001000000000000
...............................................................................................................TTAGAATAGGGGAGC......................................................................................................................................................................................1521.00200000000002000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTAGC............................................................................................................................................................................2511.00100000000000001000
...............................................................................................................TTAGAATAGGGGAGCTTAACAGC..............................................................................................................................................................................2311.00100000000000001000
..............................................................................................................CTTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2311.00100000000001000000
................................................................................................................TAGAATAGGGGAGCTTAACTTGAA............................................................................................................................................................................2411.00100000000000001000
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGT......................................................................................................................................2111.00101000000000000000
........................................................................................AAT----CTTGGTCCAACTTGCC.....................................................................................................................................................................................................1911.00100000000000100000
...............................................................................................................TTAGAATAGGGGAGCTTTTA.................................................................................................................................................................................2060.67400000000000004000
...............................................................................................................TTAGAATAGGGGAGCTTAAAAA...............................................................................................................................................................................2230.33100000000000001000
droSec2
GCATCTTCTAG-------------------------TGGGTAA---ATCCAT--GTGG------T------TATGATAAGTCAATCAAAAT----CTTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTGTGTTT--TTAATGTTTAAGTTAAAAGCCACTGTTCTAAGACAATTTGATGATCAAAAC-CACCTGACAAAAAAATACTTCGT----------TTTAAAGCTAATAATGGTTACAC-------------------------------------------------------AAAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................221573.00573224804427
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................211550.00550164802331
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................20150.005034322
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................23142.004213641
.........................................................................................AT----CTTGGTCCAACTTGCC.....................................................................................................................................................................................................18134.003400331
........................................................................................................................................................GTTAAAAGCCACTGTTCTAAGA......................................................................................................................................2217.0070421
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................1917.0070700
........................................................................................................................................................GTTAAAAGCCACTGTTCTAAG.......................................................................................................................................2116.0063300
................................................................................................................TAGAATAGGGGAGCTTAACTTG..............................................................................................................................................................................2214.0040400
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2113.0031200
........................................................................................AAT----CTTGGTCCAACTTGCC.....................................................................................................................................................................................................1912.0020020
...............................................................................................................TTAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2312.0020200
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................2012.0020200
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................2112.0020200
...............................................................................................................TTAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................2212.0020200
...............................................................................................................TTAGAATAGGGGAGCTTAAT.................................................................................................................................................................................2011.0010100
................................................................................................................TAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2211.0010100
...................................................................................................................AATAGGGGAGCTTAACTTT..............................................................................................................................................................................1911.0010100
.........................................................................................AT----CTTGGTCCAACTTGCT.....................................................................................................................................................................................................1811.0010010
.......................................................................................AAAT----CTTGGTCCAACTTGCC.....................................................................................................................................................................................................2011.0010010
.................................................................................................................AGAATAGGGGAGCTTAACT................................................................................................................................................................................1911.0010100
.........................................................................................................................................................TTAAAAGCCACTGTTCTAAGA......................................................................................................................................2111.0010100
...............................................................................................................TTAGAATAGGGGAGCTTAACTTGTG............................................................................................................................................................................2511.0010100
dm3
GCGTCTTCTAG-------------------------TTGGT--GA----------------------------T-----ACCAATA-ACAT----ATTGGTCCAACTTGCCTTAGAATAGGGGAGCTTAACTTATGTTT--TTGATGTTTAAGTTAAAAGCCTCTGTTCTAAGACAATTTGATGATCAAAAC-AGCC----GGAGAAATACTTCAT--------------------ATAATGGTTACAA-------------------------------------------------------CAAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................22126149.00261490000010010444000000003793753000010000001326161286221910917361451410301400010000000000000000000107750141141200042142118105151111942212500931316519213219201000000100012000000100211200286921958911681728361500000008405250500312741145600093210354942223235031181128247100001225003100335382351103311451702454371835940624350000000540201000340054000000000100002010000175909361692113820106111002101210241546011255730793372418742838001124756330602035001119133632852667430402300
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................21116906.00169060000010000040000000022112196020100000019161453627131257301714321630113812000000000000000000000304104026000107815315879003101970000243277103301200001001000000000000101010347120643121104223229220000000154082004014115505018027052874547212532262100550212796521000162480240016088290113217672921721153319511921020000220120031251036000001001000003000500127608281098751856210006294141151239010175042752871884408617001195146500600005100140184158050795625902320
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2118794.00879400000201000130000000000216790000000000022201030011831341200000000000000000000000000002004000201400106217100415040018051206520237000000000000000000000000000003131911837047000000005100000200051202010000301430121652800042501048190000004000000100136326510103854116201300000000100000000140019000000000000001001000645331772763330000000100137720247410158456339413009962201101000000521124459103100000
................................................................................................................TAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2215545.005545000001000003000000100109670000000000031310007000630124300000000000000000000000101002000000113003700150011010000060403001100000000000000000000000000000161535344100000000002001001000502000100002001814842200020705401000000300000022344912131461031000000001100000001800170000000000000000010004432110207453391000000001156001414312197353310624003751500100011000281120454157101100
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................2015261.005261000000000007000000000017790000000000053520161201532413000000000000000000000000010007000000102004212200014420030150170101000001001000000000000000000000482191530061000000000020000010002010002000011002465907410023204184000004100000000026391853110261114400000000000100000800800000000000000000000059410115276342000000030002570162104171004911822230011222500400000000321129101311144501000
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2011842.0018420000000000010000000000227700000000000140101106416412375000000000000000000000000110000010000000062230010220000011200000000000000000000000000000000041617814810410000030020000000001020013100010004841662200510805000002120000030014583446148192053114102111002000000103004000000000000000000200249042527319100001400011300108512212622535001366910000000000623798964301010
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................231913.009130000000010000000000000069001000000000000000001011012000000000000000000000000000000000000000000000200050000001001000300000000000000000000000000000115423140000000000000000010010100000000100690184000024013400000000000000000314110043810270000000000010000020010000000000000000100000812041210000000000300000221810747510035000000000000862412113000000
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................191665.0066500000000000000000000001131000000000000111000120241011000000000000000000000000000000000000000010101300010000000012100800000000000000000000000000000328242031200000000000010000010000020000000184952000200260000000100000000021506132430210000000000000000010050000000000000000000002251312011000012010030002204410216180031260000000000021523013100000
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................181395.003950000000000000000000000073000000000001020100002050000010000000000000000000000001010000000000000010200000100000001000000000000000000000000000000000011005000000000000000000000000003000000000826120002401500000000000000000011130012100000000000200000000000000000000000000000000019160003000000200001200001037274003300000000000011320432800000
................................................................................................................TAGAATAGGGGAGCTTAAC.................................................................................................................................................................................191395.00395000000000000000000000025800000000000000000000000000000000000000000000000000000000000000000000030020000010000000200000000000000000000000000000000003210100000000000000000000000000000000001010443000017015000000010000000002709004400000010000000000000010010000000000000000000006513504020000000000031100202469560011020000000010010611121000000
................................................................................................................TAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................221310.003100000000000000000000000056000000000000000000000000100000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000001000000000000000000000000000000000000604510001305100000000000000000240010100000000000000000000001001000000000000000000000360233010000000000040000011937121800062000000000000090102400000
................................................................................................................TAGAATAGGGGAGCTTAACTTAA.............................................................................................................................................................................231205.00205000000000000000000000009000000000000000000000100000000000000000000000000000000000000000000000500400100000100001000000000000000000000000000000000000000000000000000000000000000000000000000200480000304400000000000000000050100000100000000000000000000000000000000000000000000010010100000000000001100000051281100021000000000000070000100000
........................................................................................................................................................GTTAAAAGCCTCTGTTCTAAGA......................................................................................................................................221198.0019800000000000000000000000600000000000000000010000000000000000000000000000000000310000000000000090000000010000000500000000000000000000000000000000000010200000000050000000000005400000000000000500001014000000000000000012011367276426350000000000000000000010000000000000000000000000000000000000000000000000120000001000000000000000100100000
.........................................................................................................................................................TTAAAAGCCTCTGTTCTAAGA......................................................................................................................................211169.0016900000000000000000000001130000000000000000001000100000000000000000000000000000000000000000000003000000100000001020002000000000000000000000000000000000050000000000000000000000100000020000004014000010300000001000000000150075837751111000010000000000002000000000000000000000000030013000000000000000000000021000010000000000000000000200000
................................................................................................................TAGAATAGGGGAGCTTAA..................................................................................................................................................................................181135.001350000000000000000000000031000000000000100000000010000000000000000000000000000000000000000000000400200000100000001000000000000000000000000000000000001010000000000000000000000000000000000000302010004012000000000000000000003000000000000000000000000000010000000000000000000001900022300000000000300001112114100020000000000002010100100000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTATC............................................................................................................................................................................251131.0013100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................231122.00122000000000000000000000013300000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000050800004060000000000000000003001100000000002100000000000100000000000000000000000014000000000000000001000000151231000820000000000000020000400000
........................................................................................................................................................GTTAAAAGCCTCTGTTCTAAG.......................................................................................................................................211121.001210000000000010000000000012000010000000000000200010000000000000000000000000000000000000000000000900100100000000107000000000000000000000000000000000010002000000000000000000000007011102000000001000000100000000000000000020182711201616000000000000000000000000000000000000000000000001000000000000000000000020000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTATC.............................................................................................................................................................................24181.008100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAAA.................................................................................................................................................................................20173.007300000000000000000000002110000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000003030000404000000000000000000001000100100000000000000000000000000000000000000000001300010000000000000100000000213400010000000000000020000000000
.........................................................................................AT----ATTGGTCCAACTTGCC.....................................................................................................................................................................................................18163.006300000000000000000000000180000000000000000000000000000000000000000000000000000000002002000000001200400300000100007000200000000000000000000000000000000000000000000000000000200000000000000000004000000000000000000000000010010000000000000000000000000000000000000000000010000000000000000000000000000000010000200000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................21160.006000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000001001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000303000000000000000000000001100010000100000000000020000000000000000000000000300000000000000000000010000183200000000000000000010011100000
...............................................................................................................TTAGAATAGGGGAGCTTT...................................................................................................................................................................................18160.00600000000000000000000000180000000000000100000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010010000000000000000000000000000000000001070000101200000000000000000006000000000000000000000000000000000000000000000000000000000000000000000200000000170000000000000000000000000900000
.......................................................................................................................................................AGTTAAAAGCCTCTGTTCTAAG.......................................................................................................................................22159.00590000000000000000000000017000000000000000000000000000000000000000000000000000001100200000000000300600010000000002000300000000000000010000000000000001010000000000000000000000000000000000000002000000100000000000000000000030230044000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TTAAAAGCCTCTGTTCTAAG.......................................................................................................................................20154.00540000000000000000000000012000000000000000000000000000000000000000000000000000010000000000000000300000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000006000000300000000000000000220123241032000000000000000012000000000000000000000000010000000000000000000000000020000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTTAAA............................................................................................................................................................................24141.0041000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309000000500000000000000000000000000000000000000000000000000000000000000000000000010002000000000000020000001160900010000000000000010000000000
................................................................................................................TAGAATAGGGGAGCTTAACTTAT.............................................................................................................................................................................23137.0037000000000001000000000002000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407000020300000000000000000010000000000000001000000000000000000000000000000000000010100000000000000000000000241200003000000000001000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................22135.00350000000000000000000000030000000000000000000010000000000000000000000000000000000000000000000000001000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000020500000000000000000100000000000000020000000000000000000000000000000000000010100010000000000000000000012000000000000000000020000000000
.................................................................................................................AGAATAGGGGAGCTTAACTT...............................................................................................................................................................................20135.00350000000000010000000000040000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000000030000005000000000000000000001000000000000000000000000000000000000000000000000000200000000000000000200000001101000000000000000001010000000000
................................................................................................................TAGAATAGGGGAGCTTAACTTATC............................................................................................................................................................................24135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................23132.0032000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000600000000000000000000100001000000072000000000000000000000000000000000000010000000000000000000000000030100000000000000000010000000000
.................................................................................................................AGAATAGGGGAGCTTAACT................................................................................................................................................................................19131.0031000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000102000000100000000000000000220000000001000000000000000000000000000000000000000000020200000000000000000000100080000010000000000000001000100000
...............................................................................................................TTAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................22129.0029000001000003000000000006000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000101000010100000000000000000000100000000000011000000000000000000000000000000000000000001000000000000000000000132100000000000000000010000000000
..............................................................................................................CTTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................23127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302000010800000000000000000000000001000000000000000000000000000000000000000000000020000000000000000000000000040300010000000000001000000000000
................................................................................................................TAGAATAGGGGAGCTTAAA.................................................................................................................................................................................19125.0025000000000000000000000006000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000001000000000000000000000030000010000000000000000000051200000000000000000010000000000
.......................................................................................................................................................AGTTAAAAGCCTCTGTTCTAA........................................................................................................................................21124.0024000000000000000000000004000000000000000000001000000000000000000000000000000000000000000010000900300000100000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TTAAAAGCCTCTGTTCTAAGAA.....................................................................................................................................22123.0023000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000100000000000100000000000000000000000000000000000001100000000000000000000000000000000000000002000000000000000000000000010012051111100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................CAT----ATTGGTCCAACTTGCC.....................................................................................................................................................................................................19123.00230000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000100300100000000000002000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AGTTAAAAGCCTCTGTTCT..........................................................................................................................................19122.0022000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000300000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000101011000000000000000000000000000000000000000000120001010000000000010000000000000000000000000000000000000000
..................................................................................................................GAATAGGGGAGCTTAACTT...............................................................................................................................................................................19122.0022000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100100000000000002000000000000000000000000000000000000000000000000000000000000000000000000000300000020100000000000000000000000000000000000000000000000000000000000000000000000190000000000000000010000000000000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACA................................................................................................................................................................................20121.0021000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000003000010000000000000000000000000100000000000000000000000000000000000000000000000100100000000000000000000002041000000000000000000020000000000
................................................................................................................TAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................22120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000010000000000000000000000000000000000000030001000000000000010000000221300000000000000000030000000000
.......................................................................................................................................................AGTTAAAAGCCTCTGTTCTA.........................................................................................................................................20120.0020000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000300000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000010010000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACG................................................................................................................................................................................21119.0019000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000063200000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACC................................................................................................................................................................................21119.0019000000000000000000000004000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010100000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000151000000000000000000000000100000
.................................................................................................................AGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................21118.0018000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000020000000000000101000010200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000050000010000000000000000001000000
................................................................................................................TAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................21116.0016000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010100000000000000000000000000000000000000000000000000000000000000000000000050001000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAT..................................................................................................................................................................................19115.0015000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000010000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000020000100000000000001000000000000
..............................................................................................................CTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................22113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000010300000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000021000010000000000000010000000000
................................................................................................................TAGAATAGGGGAGCTTAACTATC.............................................................................................................................................................................23113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AATAGGGGAGCTTAACTT...............................................................................................................................................................................18113.0013000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000100000000000000000000000000000000000000000000000000000000000000000000000160000000000000000100000000000000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................21112.0012000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000200000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000011000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTG...............................................................................................................................................................................22112.0012000000000000000000000002000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000102000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000
........................................................................................................................................................GTTAAAAGCCTCTGTTCTAA........................................................................................................................................20112.0012000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000104000010100000000000000000000000110010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TTAAAAGCCTCTGTTCTAAGAT.....................................................................................................................................22111.0011000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000010000000000000000000010000101002000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GTTAAAAGCCTCTGTTCTAAGT......................................................................................................................................22110.0010000000000000000000000001000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000100000
.......................................................................................ACAT----ATTGGTCCAACTTGCC.....................................................................................................................................................................................................20110.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111020002000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTATT.................................................................................................................................................................................20110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061000000000000000000000010100000
....................................................................................................................ATAGGGGAGCTTAACTT...............................................................................................................................................................................17110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTTT..................................................................................................................................................................................1929.50190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000100000000100000110000000000000000010000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTAA.............................................................................................................................................................................2419.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000010000000000000000000000000000000000000000000000000000010001000000000000000000000000200000000000000000020000000000
...............................................................................................................TTAGAATAGGGGAGCTT....................................................................................................................................................................................1719.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAAAA................................................................................................................................................................................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000020000000000
..................................................................................................................GAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2017.007000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TTAAAAGCCTCTGTTCTAAGAC.....................................................................................................................................2217.007000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
GCATCTTCTAG-------------------------TTGGT--TACATCCTT--GCGT------T------AGTGATCAATCAATA-ACGT----TTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTGTGTGT--GTTATGCTTAAGTTAAGAGCCTTTATTCTAAGTCAATTCGACTGCCAACTC-TGCG--------------------------------------CATTATGGTTACGA-------------------------------------------------------AGAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2112600.00260012221123871770
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2212242.00224229125220181670
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................231361.003610030337210
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................201275.002750000264110
........................................................................................................................................................GTTAAGAGCCTTTATTCTAAGT......................................................................................................................................221142.00142111013450
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................19163.006300105840
.........................................................................................................................................................TTAAGAGCCTTTATTCTAAGT......................................................................................................................................21142.004200003930
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................21111.00115000600
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................2118.0080000710
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................1817.0070000610
........................................................................................................................................................GTTAAGAGCCTTTATTCTAA........................................................................................................................................2017.0070000610
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................2016.0061000500
...............................................................................................................TTAGAATAGGGGAGCTTAAA.................................................................................................................................................................................2015.0050000500
.........................................................................................................................................................TTAAGAGCCTTTATTCTAAGTT.....................................................................................................................................2214.0040000400
.........................................................................................................................................................TTAAGAGCCTTTATTCTAAG.......................................................................................................................................2014.0040000310
...............................................................................................................TTAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................2213.0030000300
...............................................................................................................TTAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2313.0030000210
..............................................................................................................CTTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2313.0031000110
...............................................................................................................TTAGAATAGGGGAGCTTAT..................................................................................................................................................................................1913.0030000300
...............................................................................................................TTAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................2312.0020000200
.........................................................................................................................................................TTAAGAGCCTTTATTCTAAGTA.....................................................................................................................................2212.0020000200
........................................................................................................................................................GTTAAGAGCCTTTATTCTAAGTT.....................................................................................................................................2312.0020000200
........................................................................................................................................................GTTAAGAGCCTTTATTCTAAGA......................................................................................................................................2212.0020000200
...............................................................................................................TTAGAATAGGGGAGCTTATT.................................................................................................................................................................................2012.0020000200
...............................................................................................................TTAGAATAGGGGAGCTTAACTTG..............................................................................................................................................................................2312.0020000110
........................................................................................................................................................GTTAAGAGCCTTTATTCTAAGC......................................................................................................................................2212.0020000200
........................................................................................................................................................GTTAAGAGCCTTTATTCTAAG.......................................................................................................................................2111.0010000100
.......................................................................................................................................................AGTTAAGAGCCTTTATTCTAAG.......................................................................................................................................2211.0010000100
...............................................................................................................TTAGAATAGGGGAGCTTT...................................................................................................................................................................................1811.0010000100
.......................................................................................ACGT----TTTGGTCCCACTTGTC.....................................................................................................................................................................................................2011.0010000010
...............................................................................................................TTAGAATAGGGGAGCTTAACTTAA.............................................................................................................................................................................2411.0010000100
..........................................................................................................................................................TAAGAGCCTTTATTCTAAGT......................................................................................................................................2011.0010000100
.....................................................................................................................TAGGGGAGCTTAACTTGTGTGT--GTT....................................................................................................................................................................2511.0010000100
..........................................................................................................................................................TAAGAGCCTTTATTCTAAGTTT....................................................................................................................................2211.0010000100
...............................................................................................................TTAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................2211.0010000010
........................................................................................CGT----TTTGGTCCCACTTGTC.....................................................................................................................................................................................................1911.0010000010
.................................................................................................................AGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2011.0010000100
...............................................................................................................TTAGAATAGGGGAGCTTAACTCT..............................................................................................................................................................................2311.0010000100
.....................................................................................A-ACGT----TTTGGTCCCACTTGTC.....................................................................................................................................................................................................2111.0010000100
................................................................................................................TAGAATAGGGGAGCTTAA..................................................................................................................................................................................1811.0011000000
................................................................................................................TAGAATAGGGGAGCTTAAC.................................................................................................................................................................................1911.0011000000
...............................................................................................................TTAGAATAGGGGAGCTTAAAA................................................................................................................................................................................2120.5010000100
droYak3
GCATCTTCAAG-TTAT------------------------------ATCC---------------------TATGATCAATCAATG-AAAT----CTTGGTCCCACTTGTCTTAGAATAGGGGAGCTTAACTTATGTAT--ATCATGTATAAGTTAAGAACCTTTATTCTAAGACAATTCGACTACAAAATC-AACT----GAAAAACTACTTCAACTTGTTTTATTTTGAAACTTAT----------T-------------------------------------------------------AGAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................211518.00518209504124650030
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................221448.004481116101254002010
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................20142.0042311000370000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................23130.0030001001280000
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................21117.0017010003130000
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................20117.0017210000140000
................................................................................................................TAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................22114.0014000000140000
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................19110.001001000090000
.................................................................................................................AGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2117.00700000070000
.................................................................................................................AGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2013.00300000030000
...............................................................................................................TTAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................2213.00320000010000
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................1813.00310000200000
................................................................................................................TAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2212.00200000020000
..............................................................................................................CTTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2312.00200000020000
.................................................................................................................AGAATAGGGGAGCTTAACTTAT.............................................................................................................................................................................2212.00200000020000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2312.00200000020000
........................................................................................................................................................GTTAAGAACCTTTATTCTAA........................................................................................................................................2012.00220000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................2111.00100000010000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTA.............................................................................................................................................................................2411.00100000010000
................................................................................................................TAGAATAGGGGAGCTTAACA................................................................................................................................................................................2011.00100000010000
........................................................................................................................................................GTTAAGAACCTTTATTCT..........................................................................................................................................1811.00110000000000
.......................................................................................................................................................AGTTAAGAACCTTTATTCT..........................................................................................................................................1911.00100001000000
..................................................................................................................GAATAGGGGAGCTTAACTT...............................................................................................................................................................................1911.00100000010000
...............................................................................................................TTAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................2211.00100000010000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................2311.00110000000000
.................................................................................................................AGAATAGGGGAGCTTAACT................................................................................................................................................................................1911.00100000010000
...............................................................................................................TTAGAATAGGGGAGCTTAACC................................................................................................................................................................................2111.00110000000000
....................................................................................TG-AAAT----CTTGGTCCCACTTGTC.....................................................................................................................................................................................................2211.00100000010000
droEug1
GCACCCCT-CG-------------------------AAAGT--AA--TACTCGAGCAA------TACCAGTAATAA----------TAATC----CGAGGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGTAC--GCAATGTTTAAGTTA-GATCCTTTTTTCTAAGATAATTCGGCTGTCAGAAC--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCAACTTCTCA-------------------------ATAGC--TA--TGCAT--GCTGCAA---T------GGCGATAAACTGATAAAACC----GACTGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATGTGT--GCCGATTTTAAGTTAAGAGCCTTTTTTCTAAGATAATCCGACTATCAAAAC--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCAACTCCTCC-------------------------TAAGT--TA--TGCAT--GCTA------T------TGCGCCAAATTAATATAAAC----CGAGGTCTAACTTGTCTTAGAATAGGGGAGCTTAACTTATGTAG--GTCATGTTTAAGTTAAGAGCCTTTTTTCTAAGATAATTCGACTATCGTAAC-AACGTGCTGATTGAGTATTATGA---GT-----TTTACGAG--------TATTTATGAGTATTATGAATTTCAAATTTGAAGCGATATGATACGACTGTAATGATTTAATTTAATSizeHit CountTotal NormTotal
No Reads
droEle1
CCAGCTCCAAC-------------------------AAAGT--AA--CTATC-----G------T------TTTGTCAAATTATTTAAACC----AGAGGTCATACTTGCCTTAGAATAGGGGAGCTTGACTTATGTGC--GTTATGTTTAAGTTAAGAGCCTTAATTCTAAGATAATTCGACTATCAAAAC-AGCATGC-------------TATTTTGTATATATCAAATCAAAATGTTTTTTTTAC-------------------------------------------------------AGAGSizeHit CountTotal NormTotal
No Reads
droRho1
CCAACTCCACC-------------------------ATAATAA---ATTATT--GT---------------GTTGCCAAATTATTCAAGCC----CAAGGTCATACTTGCCTTAGAATAGGGGAGCTTAACTTATGTTC--GTTGTGTTTAAGTTAAGAGCCTTGATTCTAAGATAATTCGACCATCAAAAC--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCAACGCCACT-CTAA---T----------------TAAA-ATA---ATCA---GTCC---------CAGTAATGAGAATCCATCTCAGCC----CAATGGCGAACTTGTCTTAGAATAGGGGAGCTTAACTTGGAA-T--CTTGTGTTGAAGTTAAGAGCCATAATTCTAAGACAATTCGACCATAAAATC-AACA--------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
GCAACTCTAAC-------------------------CCACAAG---AGTTTG--AG-G---TGGA------AAAGGTAATTCAGA-----CAGAGATAAGTCAGACTTGTCTTAGAATAGGGGAGCTTAACTTATGTGG--CAGATATTTAAGTTAAGAGCCTTAATTCTAAGACAA-----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GCTACTAAGAA-------------------------TACGAGT---GTTCGC--GGGA------T---------GAGCATC------GAAT----CAAAGTCAAACTTGTTTTAGAATAGGGGAGCTTAACTTATTGGAGAGTTGATATTAAGTTAAGATCCCTAATTCTAAGATAATGTGACCATTAATGC-AACG---------------TTGTTTTA---------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................211239.002397101520214
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................221229.0022918002217514
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................231109.001093007936
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................211107.0010716008821
................................................................................................................TAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................22173.00734005622
................................................................................................................TAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................22167.00672003611
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................20147.00470001460
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................20133.00330002292
...............................................................................................................TTAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................2319.009000171
...............................................................................................................TTAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2318.008100052
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................1915.005000140
...............................................................................................................TTAGAATAGGGGAGCTTAT..................................................................................................................................................................................1913.003100110
................................................................................................................TAGAATAGGGGAGCTTAACTTAT.............................................................................................................................................................................2313.003000030
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................1812.002100100
.................................................................................................................AGAATAGGGGAGCTTAACT................................................................................................................................................................................1912.002200000
.........................................................................................................................................................TTAAGATCCCTAATTCTAAGA......................................................................................................................................2112.002000020
................................................................................................................TAGAATAGGGGAGCTTAAC.................................................................................................................................................................................1912.002000020
...............................................................................................................TTAGAATAGGGGAGCTTATT.................................................................................................................................................................................2021.002000011
................................................................................................................TAGAATAGGGGAGCTTAACTAT..............................................................................................................................................................................2211.001000010
................................................................................................................TAGAATAGGGGAGCTTAACTTATT............................................................................................................................................................................2411.001000010
...............................................................................................................TTAGAATAGGGGAGCTTTT..................................................................................................................................................................................1941.004000040
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTA.............................................................................................................................................................................2411.001000010
................................................................................................................TAGAATAGGGGAGCTTAACTG...............................................................................................................................................................................2111.001000010
.......................................................................................................................................................AGTTAAGATCCCTAATTCT..........................................................................................................................................1911.001000001
................................................................................................................TAGAATAGGGGAGCTTAACTTAA.............................................................................................................................................................................2311.001000010
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................2111.001000010
........................................................................................................................................................GTTAAGATCCCTAATTCTAAG.......................................................................................................................................2111.001100000
........................................................................................................................................................GTTAAGATCCCTAATTCTAAGA......................................................................................................................................2211.001000010
................................................................................................................TAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................2211.001000010
.....................................................................................................................................ATTGGAGAGTTGATATTAA............................................................................................................................................................1911.001000001
...............................................................................................................TTAGAATAGGGGAGCTTAAG.................................................................................................................................................................................2011.001000010
...............................................................................................................TTAGAATAGGGGAGCTTT...................................................................................................................................................................................1811.001000100
.................................................................................................................AGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2011.001000010
...............................................................................................................TTAGAATAGGGGAGCTTAACG................................................................................................................................................................................2111.001000010
...............................................................................................................TTAGAATAGGGGAGCTTAACTTAT.............................................................................................................................................................................2411.001000010
.................................................................................................................AGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2111.001000010
................................................................................................................TAGAATAGGGGAGCTTATT.................................................................................................................................................................................1920.501000010
droBip1
GCTACACAGAT-------------------------AAAA-GTG---TTCAT--CGGA----------------AAGAATCCA------TC----AAAAGTCACACTTGTTTTAGAATAGGGGAGCTTGACTTGTTAAAGAGTTGATATAAAGTTAAGATCCTTTATTCTAAGATAATGTGACCATTATAGC--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droPer2
TCCCCGTG-------------------------------------------------------------------CCAA-----------A----TAGAGCCAAAATTATCTTAGATCGAAGGTTCCTGGCTTACAGGG--ATTTGATGTAAGTTAAGAACCTCCGCTCTAAGCTAGTATGGCTATCATCAACGGCC----CTGAAAGTACTACAA-----------------G--------TGTGTGC-------------------------------------------------------AAAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCT..........................................................................................................................................211473.00473010031459
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCTA.........................................................................................................................................221137.0013708031125
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTC...........................................................................................................................................20181.00810001080
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAA........................................................................................................................................23137.00370900028
.................................................................................................................AGATCGAAGGTTCCTGGCTT...............................................................................................................................................................................20125.00250201022
.................................................................................................................AGATCGAAGGTTCCTGGCTTAC.............................................................................................................................................................................22117.00170400112
.................................................................................................................AGATCGAAGGTTCCTGGCTTACA............................................................................................................................................................................23114.0014080006
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCTT.........................................................................................................................................22112.0012020109
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAT........................................................................................................................................23110.0010010009
.................................................................................................................AGATCGAAGGTTCCTGGCTTA..............................................................................................................................................................................2119.009030006
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCTTT........................................................................................................................................2316.006000006
......................................................................................................................................................AAGTTAAGAACCTCCGCTCT..........................................................................................................................................2015.005000005
......................................................................................................................................................AAGTTAAGAACCTCCGCTCTA.........................................................................................................................................2113.003010002
.................................................................................................................AGATCGAAGGTTCCTGGCTTT..............................................................................................................................................................................2113.003000003
......................................................................................................................................................AAGTTAAGAACCTCCGCTCTAA........................................................................................................................................2213.003020001
.....................................................................................................................................................TAAGTTAAGAACCTCCGCT............................................................................................................................................1913.003000003
.................................................................................................................AGATCGAAGGTTCCTGGCT................................................................................................................................................................................1912.002000002
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAAA......................................................................................................................................2512.002200000
...................................................................................................................ATCGAAGGTTCCTGGCTTAT.............................................................................................................................................................................2011.001000001
......................................................................................................................................................AAGTTAAGAACCTCCGCTCTAT........................................................................................................................................2211.001010000
..................................................................................................................GATCGAAGGTTCCTGGCTT...............................................................................................................................................................................1911.001000001
......................................................................................................................................................AAGTTAAGAACCTCCGCTCTT.........................................................................................................................................2111.001010000
.................................................................................................................AGATCGAAGGTTCCTGGCTTACT............................................................................................................................................................................2311.001010000
..................................................................................................................GATCGAAGGTTCCTGGCTTA..............................................................................................................................................................................2011.001000001
.................................................................................................................AGATCGAAGGTTCCTGGCTTATT............................................................................................................................................................................2311.001000001
.......................................................................................................................................................AGTTAAGAACCTCCGCTCTA.........................................................................................................................................2011.001010000
.....................................................................................................................................................TAAGTTAAGAACCTCCGCTCTAAA.......................................................................................................................................2411.001000001
...................................................................................................................ATCGAAGGTTCCTGGCTTAC.............................................................................................................................................................................2011.001000001
......................................................................................................................................................AAGTTAAGAACCTCCGCTC...........................................................................................................................................1911.001010000
droWil2
GTTTTCTTTAA-------------------------GCCCAAC---ACATTT--GTTG------T--C---TGTGTC-AGTTGA------A----CAAGGTCAAACTTGTCTTAGAATAGGGGAGCTTAACTTATATTG--TTTTGCTTAAAGTTAAGAGCCTCAATTCTAAGATAATGCGACTATCA------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAGAT.....................................................................................................................................22845.8836711343148
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................22929.11262211229128
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................21925.5623039199514
......................................................................................................................................................AAGTTAAGAGCCTCAATTCTAA........................................................................................................................................2289.38750051195
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAGA......................................................................................................................................2188.8871007001
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2198.1173096031
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2098.1173017002
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................2095.0045023823
..........................................................................................................................................................TAAGAGCCTCAATTCTAAGAT.....................................................................................................................................2185.0040003613
......................................................................................................................................................AAGTTAAGAGCCTCAATTCT..........................................................................................................................................2084.5036302625
................................................................................................................TAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2294.0036022680
........................................................................................................................................................GTTAAGAGCCTCAATTCTAAGA......................................................................................................................................2283.6329002711
..........................................................................................................................................................TAAGAGCCTCAATTCTAAGATA....................................................................................................................................2283.1325002500
................................................................................................................TAGAATAGGGGAGCTTAACTTAT.............................................................................................................................................................................2393.0027002412
......................................................................................................................................................AAGTTAAGAGCCTCAATTCTA.........................................................................................................................................2182.5020001730
...............................................................................................................TTAGAATAGGGGAGCTTAAA.................................................................................................................................................................................2092.0018001800
......................................................................................................................................................AAGTTAAGAGCCTCAATTCTAAG.......................................................................................................................................2381.8815001302
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................1991.6715011400
.......................................................................................................................................................AGTTAAGAGCCTCAATTCTAAG.......................................................................................................................................2281.381100902
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAG.......................................................................................................................................2081.2510001000
........................................................................................................................................................GTTAAGAGCCTCAATTCTAAG.......................................................................................................................................2181.2510001000
................................................................................................................TAGAATAGGGGAGCTTAACTTATA............................................................................................................................................................................2491.1110001000
...............................................................................................................TTAGAATAGGGGAGCTTAAAA................................................................................................................................................................................21101.101101910
.......................................................................................................................................................AGTTAAGAGCCTCAATTCTAA........................................................................................................................................2181.00800323
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAGAA.....................................................................................................................................2281.00800800
......................................................................................................................................................AAGTTAAGAGCCTCAATTCTAAA.......................................................................................................................................2381.00800530
...................................................................................................................................................TTAAAGTTAAGAGCCTCAATTCT..........................................................................................................................................2311.00100100
.................................................................................................................................................GCTTAAAGTTAAGAGCCTCAATTCT..........................................................................................................................................2511.00100100
...............................................................................................................TTAGAATAGGGGAGCTTAAAAA...............................................................................................................................................................................22110.9110001000
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................2190.89800710
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2390.56500401
................................................................................................................TAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2290.56500500
........................................................................................................................................................GTTAAGAGCCTCAATTCTAAGAT.....................................................................................................................................2380.50400400
...............................................................................................................TTAGAATAGGGGAGCTTAACC................................................................................................................................................................................2190.44402200
...............................................................................................................TTAGAATAGGGGAGCTTATT.................................................................................................................................................................................2090.44400301
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAGATC....................................................................................................................................2380.38301200
..........................................................................................................................................................TAAGAGCCTCAATTCTAAGATC....................................................................................................................................2280.38300300
..........................................................................................................................................................TAAGAGCCTCAATTCTAAGA......................................................................................................................................2080.38300201
................................................................................................................TAGAATAGGGGAGCTTAACTTATATT..........................................................................................................................................................................2690.33300300
.......................................................................................................................................................AGTTAAGAGCCTCAATTCTAAA.......................................................................................................................................2280.25200110
........................................................................................................................................................GTTAAGAGCCTCAATTCTAA........................................................................................................................................2080.25200020
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAGATT....................................................................................................................................2380.25200200
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAGATA....................................................................................................................................2380.25200200
.................................................................................................................AGAATAGGGGAGCTTAACTTAT.............................................................................................................................................................................2290.22200110
................................................................................................................TAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................2190.22201010
.............................................................................................................TCTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2390.22200200
................................................................................................................TAGAATAGGGGAGCTTAACTTAA.............................................................................................................................................................................2390.22200110
...........................................................................................................TGTCTTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2490.22202000
..............................................................................................................CTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2290.22201100
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................1890.22201010
.................................................................................................................AGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2190.22200200
...............................................................................................................TTAGAATAGGGGAGCTTTT..................................................................................................................................................................................19110.18200200
........................................................................................................................................................GTTAAGAGCCTCAATTCTAT........................................................................................................................................2080.13100100
.......................................................................................................................................................AGTTAAGAGCCTCAATTCTA.........................................................................................................................................2080.13100100
......................................................................................................................................................AAGTTAAGAGCCTCAATTCTAT........................................................................................................................................2280.13100001
......................................................................................................................................................AAGTTAAGAGCCTCAATTC...........................................................................................................................................1980.13100100
........................................................................................................................................................GTTAAGAGCCTCAATTCTAAA.......................................................................................................................................2180.13100010
........................................................................................................................................................GTTAAGAGCCTCAATTCTAAGT......................................................................................................................................2280.13100100
..........................................................................................................................................................TAAGAGCCTCAATTCTAAGAA.....................................................................................................................................2180.13100010
........................................................................................................................................................GTTAAGAGCCTCAATTCTAAGAC.....................................................................................................................................2380.13100100
.........................................................................................................................................................TTAAGAGCCTCAATTCTAAGATTT...................................................................................................................................2480.13100100
................................................................................................................TAGAATAGGGGAGCTTAAC.................................................................................................................................................................................1990.11100010
.............................................................................................................TCTTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2290.11101000
...........................................................................................................TGTCTTAGAATAGGGGAGCTTAAA.................................................................................................................................................................................2490.11101000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTCC............................................................................................................................................................................2590.11100100
..................................................................................................................GAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2090.11100100
................................................................................................................TAGAATAGGGGAGCTTAACG................................................................................................................................................................................2090.11110000
.................................................................................................................AGAATAGGGGAGCTTAACT................................................................................................................................................................................1990.11100100
...............................................................................................................TTAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................2290.11101000
...............................................................................................................TTAGAATAGGGGAGCTTAT..................................................................................................................................................................................1990.11100100
...............................................................................................................TTAGAATAGGGGAGCTTAACAA...............................................................................................................................................................................2290.11100100
................................................................................................................TAGAATAGGGGAGCTTAAAA................................................................................................................................................................................20100.10100100
................................................................................................................TAGAATAGGGGAGCTTAAAAA...............................................................................................................................................................................21150.07100100
droVir3
ACATGTTTCAA-------------------------A-AGT--T---TTCAT--ATTG-----------------AAAATACA------------TTAAGTTTAACTTATCTTAGAATAGGGGAGCTTAACTT-TGTAT--G-AACATTTAAGCTAAGAGCCTCAATTCTTAGATAATGCGACTAACAA-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................211110430.0011043028810244213476772601570634524256164101602971849312212436507648939091153674125820585650238088530000000000001000132031123490105823633437542350223510144361
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-..............................................................................................................................................................................22177894.00778949044436191603631951391801127312230291261008273721205880949096757462347511985046023012986467000000000001000119131313080216821720232232011122663
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-C.............................................................................................................................................................................23110011.0010011740350231088455161366200000002014882014347557358246111810104710001912260000000000000003364000614026000159728900000
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2016615.006615180210939520101315149017000101001442101393546476242327500329001024200000000000000000030018700903111347120063
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-T.............................................................................................................................................................................2313970.003970911014323122765647300000000038100301364813311595280358000063190000000000000100010009300100310100200000
...............................................................................................................TTAGAATAGGGGAGCTTAACTC-..............................................................................................................................................................................2213451.003451220014144301111246510000000104110092021210202143415028200002377000000000000000012500015502001061310218200000
...............................................................................................................TTAGAATAGGGGAGCTTAACC................................................................................................................................................................................2112956.0029562104505288734136060000000002821070212256317170565014100003263000000000000000001910013200100044717200001
........................................................................................................................................................GCTAAGAGCCTCAATTCTTAGA......................................................................................................................................2212066.0020660016005043512820001000002700003545724731546170370030126000000000000000000000103300000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................1911087.0010870050364466110210001100008500713801641577217006510000740000000000000000000012600400000000000010
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................181830.00830001000427812961000000000650020230111127481160800000234000000000000000000000100000000000000000
.........................................................................................................................................................CTAAGAGCCTCAATTCTTAGAT.....................................................................................................................................221712.00712000002404060000000100150001024210136612090160010020000000000000000000000000200000000000000
.........................................................................................................................................................CTAAGAGCCTCAATTCTTAGA......................................................................................................................................211391.003910000012030630000010001120000301227630950110000015000000000000000000000100000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTT-..............................................................................................................................................................................211373.00373004100190280602000000001180000013403617590120000228000000000000000000000401000000000010000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-CT............................................................................................................................................................................241370.003700010048200900000000000440000100231784403900000350000000000000000000001800000000000000000
........................................................................................................................................................GCTAAGAGCCTCAATTCTTA........................................................................................................................................201325.0032500000341150140000000000230000100547115430290000025000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTT...................................................................................................................................................................................181320.00320001001226607910000000001700000003246637012000009000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTC...................................................................................................................................................................................181297.00297002014010056000000000033000000023418240410000025000000000000000000000000000000101000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-CA............................................................................................................................................................................241287.00287103002920080000000000520030000291414510310000040000000000000000000010700200000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-TC............................................................................................................................................................................241242.002421010026000661000000000250010000121210380130000026000000000000000001000900000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................201187.001871025009030030000000000090000001825421050000013000000000000000000010400100000000000000
..............................................................................................................CTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................221172.00172101001202302500000000109000001022131325010000008000000000000000000000500000003000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................211159.0015900604511201000000000004700103148831002001019000000000000000000000600111300000041123
...............................................................................................................TTAGAATAGGGGAGCTTAACTA-..............................................................................................................................................................................221152.00152002001532555200000000016006501111586601003042000000000000000000000101101200000000122
..............................................................................................................CTTAGAATAGGGGAGCTTAACTT-..............................................................................................................................................................................231131.001310000070120172000000000160001000228720030000011000000000000000000000500000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAAA.................................................................................................................................................................................201101.001010020283511900000000003001002191071205000004000000000000000000000300000200000000101
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-CC............................................................................................................................................................................24195.0095002005000200000000004000120041283905000006000000000000000000000500000000000000000
.........................................................................................................................................................CTAAGAGCCTCAATTCTTAG.......................................................................................................................................20192.00920000040111000000000000001002331162801000012000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACCC-..............................................................................................................................................................................22182.0082204002000400000000002700000004621304000006000000000000000001000400000002000100000
........................................................................................................................................................GCTAAGAGCCTCAATTCTTC........................................................................................................................................20181.00810000060001000000000013000001011103150100000010000000000000000000000100000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTA-AA............................................................................................................................................................................24174.007400302210101001000000100024551010001017240000000000000000000000001410400000010036
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-TT............................................................................................................................................................................24172.0072000016011016000000000080000010862702000010000000000000000000000300000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACG................................................................................................................................................................................21171.0071400004130160000000000150000000100004000003000000000000000000000200000000000000000
........................................................................................................................................................GCTAAGAGCCTCAATTCTTAG.......................................................................................................................................21170.007000000001203000000000030000000151541201000004000000000000000000000100000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-A.............................................................................................................................................................................23169.00690030122206100000000060010012672901001028000000000000000000000100000200000000021
...............................................................................................................TTAGAATAGGGGAGCTTTC..................................................................................................................................................................................19166.00660010050012100000000002000000041117010000012000000000000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTT-C.............................................................................................................................................................................22159.005900300300011000000000081000000705804000007000000000000000000000200000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTC-C.............................................................................................................................................................................23154.005400200200020000000000600000005241806000007000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-TTC...........................................................................................................................................................................25150.005000000500015000000000030000000921703000002000000000000000000000300000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACAA-..............................................................................................................................................................................22145.004500300010000000000000400010200100000000000000000000000000000000000341100000041334
...............................................................................................................TTAGAATAGGGGAGCTTAACCA-..............................................................................................................................................................................22145.004500170013000000000000060011141010102000031000000000000000000000000200000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-AAA...........................................................................................................................................................................25145.00450000002000010100000000002064000100105051000000000000000000000000301300000012321
.........................................................................................................................................................CTAAGAGCCTCAATTCTTAGATC....................................................................................................................................23143.00430000010000000000000000000000151131300000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTG-..............................................................................................................................................................................22141.004100000203050000000000170000000200001000004000000000000000000000400000100000000110
...............................................................................................................TTAGAATAGGGGAGCTTAACTA-A.............................................................................................................................................................................23140.00400030021010300000000020000035000200009060000000000000000000000100000020000000000
..........................................................................................................................................................TAAGAGCCTCAATTCTTAGAT.....................................................................................................................................21138.0038000001000000000000001000000013651200000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAT..................................................................................................................................................................................19138.003800001103014000000000020000000170601000002000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTCT..................................................................................................................................................................................19138.00380000030006000000000070000000142505000005000000000000000000000000000000000000000
..........................................................................................................................................................TAAGAGCCTCAATTCTTAGA......................................................................................................................................20137.00370000090302100000000030000000821202000012000000000000000000000000100000000000000
...................................................................................................................AATAGGGGAGCTTAACTT-..............................................................................................................................................................................18135.00350000000505000000000070000000421207000002000000000000000000000000000000000000000
........................................................................................................................................................GCTAAGAGCCTCAATTCTT.........................................................................................................................................19134.00340000041101000000000040000000960211000004000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTCC..................................................................................................................................................................................19232.5065001001600070000000000700000000337070000013000000000000000000000100000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTTT..................................................................................................................................................................................19232.0064000001019028000000000000000000530304000001000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-AA............................................................................................................................................................................24132.00320020200000110000000000001142100001015041000000000000000000000000100100000020001
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-TCC...........................................................................................................................................................................25130.00300000050005000000000020000000330403000004000000000000000001000000000000000000000
..................................................................................................................GAATAGGGGAGCTTAACTT-..............................................................................................................................................................................19127.00270010050102000000000040000000114402000002000000000000000000000000000000000000000
.................................................................................................................AGAATAGGGGAGCTTAACTT-..............................................................................................................................................................................20126.00260030020315000000000010000000520101000000000000000000000000000200000000000000000
.................................................................................................................AGAATAGGGGAGCTTAACT................................................................................................................................................................................19126.00260020040101000000000001000000342402000001000000000000000000000100000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-TTCC..........................................................................................................................................................................26125.00250000020002000000000010000000440503000002000000000000000000000200000000000000000
............................................................................................................ATCTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................24124.002400000000000000000000000000001211100000000000000000000000000000000000000000000000
..................................................................................................................GAATAGGGGAGCTTAACT................................................................................................................................................................................18123.00230010040004000000000030010000002203000003000000000000000000000000000000000000000
..............................................................................................................CTTAGAATAGGGGAGCTTAACTT-C.............................................................................................................................................................................24119.00190020020002000000000010000000121102000005000000000000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTT-T.............................................................................................................................................................................22117.00170000000302000000000020000000111501000001000000000000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTC-..............................................................................................................................................................................21116.00162020000004000000000030000000000201000002000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACAA-A.............................................................................................................................................................................23116.00160010000000000000000000001001000000000000000000000000000000000000101200000000144
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-G.............................................................................................................................................................................23115.00150000110102000000000020000000112003000001000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAAAA................................................................................................................................................................................21214.00280010004002100100000010010220111010003010000000000000000000010000010200000000001
..............................................................................................................CTTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................21113.00130000000002000000000000000000261200000000000000000000000000000000000000000000000
..........................................................................................................................................................TAAGAGCCTCAATTCTTAGATC....................................................................................................................................22113.00130000000000000000000000000000412203000000000000000000000000000000000000000100000
...............................................................................................................TTAGAATAGGGGAGCTTAAT.................................................................................................................................................................................20113.00130000010203100000000000000000011201000001000000000000000000000000000000000000000
........................................................................................................................................................GCTAAGAGCCTCAATTCTTAGAA.....................................................................................................................................23113.00130000000000000000000000000010321600000000000000000000000000000000000000000000000
...........................................................................................................................................................AAGAGCCTCAATTCTTAGA......................................................................................................................................19112.00120000020400000000000030000000020000000001000000000000000000000000000000000000000
........................................................................................................................................................GCTAAGAGCCTCAATTCTTAGAC.....................................................................................................................................23112.00120000000000000000000000000000530400000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTATT.................................................................................................................................................................................20112.00120000010901000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAATC................................................................................................................................................................................21111.00110010010003000000000010000000220100000000000000000000000000000000000000000000000
.........................................................................................................................................................CTAAGAGCCTCAATTCTTA........................................................................................................................................19111.00110000040000000000000010000000100203000000000000000000000000000000000000000000000
............................................................................................................ATCTTAGAATAGGGGAGCTTAACTT-..............................................................................................................................................................................25111.001100000000000000000000000000000110000000000000000000000000000000000000000000000000
..........................................................................................................................................................TAAGAGCCTCAATTCTTAGATA....................................................................................................................................22111.00110000000000000000000020000010331100000000000000000000000000000000000000000000000
.............................................................................................................TCTTAGAATAGGGGAGCTT....................................................................................................................................................................................19110.00100000040000000000000000000000000302000001000000000000000000000000000000000000000
.........................................................................................................................................................CTAAGAGCCTCAATTCTTAGATT....................................................................................................................................23110.00100000000000000000000000000000430300000000000000000000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACC................................................................................................................................................................................2019.0090040010000000000000010000010010000000000000000000000000000000100000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTACT.................................................................................................................................................................................2019.0090000020004000000000000000000110100000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAC..................................................................................................................................................................................1919.0090000000001000000000010000000031100000002000000000000000000000000000000000000000
....................................................................................................................ATAGGGGAGCTTAACTT-C.............................................................................................................................................................................1818.0080000000000000000000020000000100003000002000000000000000000000000000000000000000
.........................................................................................................................................................CTAAGAGCCTCAATTCTTAGAC.....................................................................................................................................2218.0080000000000000000000000001001300300000000000000000000000000000000000000000000000
..............................................................................................................CTTAGAATAGGGGAGCTTAACTC-..............................................................................................................................................................................2317.0070000000000000000000020000000110101100000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-TA............................................................................................................................................................................2417.0070010000200000000000000000000200200000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTC-A.............................................................................................................................................................................2317.0070000020000000000000020000000001001000000000000000000000000000100000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACCG-..............................................................................................................................................................................2216.0060000000000000000000050000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................CTAAGAGCCTCAATTCTTAGAA.....................................................................................................................................2216.0060000010000000000000000001000020200000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACTT-CTC...........................................................................................................................................................................2516.0060000020000000000000000000000010200000000000000000000000000000100000000000000000
........................................................................................................................................................GCTAAGAGCCTCAATTCT..........................................................................................................................................1816.0060000010301000010000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAGAATAGGGGAGCTTAACTA-..............................................................................................................................................................................2116.0060030000010000000000010000010000000000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAACGC-..............................................................................................................................................................................2216.0060000010200000000000030000000000000000000000000000000000000000000000000000000000
..............................................................................................................CTTAGAATAGGGGAGCTTAACC................................................................................................................................................................................2216.0060000000000000000000010000000010200000000000000000000000000000200000000000000000
..........................................................................................................................................................TAAGAGCCTCAATTCTTAGATT....................................................................................................................................2216.0060000000000000000000010000000120002000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTAAAC................................................................................................................................................................................2116.0060000010000000000000020010000100100000000000000000000000000000000000000000000000
...............................................................................................................TTAGAATAGGGGAGCTTG...................................................................................................................................................................................1816.0060000000104000000000000000000001000000000000000000000000000000000000000000000000
droMoj3
CCATAAATATT--GATATATGATGATGATTTTCCAATTG-----------------TG----------------ATGAAATCA------------TTGAGTTCAACTTATCTTAGAATAGGGGAGCTTAACTTAAT--C--TGAACACTCAAGCTAAGAGCCTCGATTCTTCGATAATGCGACTAACA------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2211150.001150940143401008
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................201884.00884240540851
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................211589.005892108290531
...............................................................................................................TTAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................231387.00387100110375
........................................................................................................................................................GCTAAGAGCCTCGATTCTTCG.......................................................................................................................................211207.0020750240196
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................191183.0018380040171
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................231113.0011320380100
...............................................................................................................TTAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................221110.0011060000104
...............................................................................................................TTAGAATAGGGGAGCTTAT..................................................................................................................................................................................19127.00270000027
...............................................................................................................TTAGAATAGGGGAGCTTAAA.................................................................................................................................................................................20119.00190001018
..........................................................................................................................................................TAAGAGCCTCGATTCTTCGAT.....................................................................................................................................21115.00150003012
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................18114.0014201407
...............................................................................................................TTAGAATAGGGGAGCTTATT.................................................................................................................................................................................20114.00141000013
.........................................................................................................................................................CTAAGAGCCTCGATTCTTCGAT.....................................................................................................................................22112.00120000012
........................................................................................................................................................GCTAAGAGCCTCGATTCTTCGA......................................................................................................................................22111.0011300008
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................21110.00100000010
...............................................................................................................TTAGAATAGGGGAGCTTAACC................................................................................................................................................................................2119.009000009
...............................................................................................................TTAGAATAGGGGAGCTTAACTCT..............................................................................................................................................................................2319.009000009
..........................................................................................................................................................TAAGAGCCTCGATTCTTCGATA....................................................................................................................................2218.008000008
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................2118.008600002
...............................................................................................................TTAGAATAGGGGAGCTTAAT.................................................................................................................................................................................2017.007000106
...............................................................................................................TTAGAATAGGGGAGCTTAACTTA..............................................................................................................................................................................2316.006000006
...............................................................................................................TTAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................2214.004100003
...............................................................................................................TTAGAATAGGGGAGCTTTC..................................................................................................................................................................................1913.003000003
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTT.............................................................................................................................................................................2413.003000003
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTC.............................................................................................................................................................................2413.003000003
..........................................................................................................................................................TAAGAGCCTCGATTCTTCGATT....................................................................................................................................2213.003000003
...............................................................................................................TTAGAATAGGGGAGCTTAAAA................................................................................................................................................................................2122.505000005
...............................................................................................................TTAGAATAGGGGAGCTTAACTTTTC--..........................................................................................................................................................................2512.002000002
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................2012.002101000
...............................................................................................................TTAGAATAGGGGAGCTTAACTTCT.............................................................................................................................................................................2412.002000002
........................................................................................................................................................GCTAAGAGCCTCGATTCTTC........................................................................................................................................2012.002000002
...............................................................................................................TTAGAATAGGGGAGCTTAATC................................................................................................................................................................................2112.002000002
.........................................................................................................................................................CTAAGAGCCTCGATTCTTCGATA....................................................................................................................................2312.002000002
...............................................................................................................TTAGAATAGGGGAGCTTTT..................................................................................................................................................................................1971.57110000011
..........................................................................................................................................................TAAGAGCCTCGATTCTTCGATAA...................................................................................................................................2311.001000001
................................................................................................................TAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................2211.001000001
..........................................................................................................................................................TAAGAGCCTCGATTCTTCGATCT...................................................................................................................................2311.001000001
...............................................................................................................TTAGAATAGGGGAGCTTTG..................................................................................................................................................................................1921.002000002
.............................................................................................................TCTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2311.001100000
................................................................................................................TAGAATAGGGGAGCTTAA..................................................................................................................................................................................1811.001100000
.............................................................................................................TCTTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2211.001000001
...............................................................................................................TTAGAATAGGGGAGCTTAG..................................................................................................................................................................................1911.001000001
...............................................................................................................TTAGAATAGGGGAGCTTC...................................................................................................................................................................................1811.001100000
..........................................................................................................................................................TAAGAGCCTCGATTCTTCGATC....................................................................................................................................2211.001000001
.................................................................................................................AGAATAGGGGAGCTTAAC.................................................................................................................................................................................1811.001000001
.........................................................................................................................................................CTAAGAGCCTCGATTCTTCGA......................................................................................................................................2111.001000001
..............................................................................................................CTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2211.001000001
........................................................................................................................................................GCTAAGAGCCTCGATTCTTCGAC.....................................................................................................................................2311.001000001
...............................................................................................................TTAGAATAGGGGAGCTTAACTCTT.............................................................................................................................................................................2411.001000001
...............................................................................................................TTAGAATAGGGGAGCTTAACTGGC.............................................................................................................................................................................2411.001100000
........................................................................................................................................................GCTAAGAGCCTCGATTCTTCGC......................................................................................................................................2211.001000001
...............................................................................................................TTAGAATAGGGGAGCTTAAG.................................................................................................................................................................................2011.001000001
........................................................................................................................................................GCTAAGAGCCTCGATTCTTCGAT.....................................................................................................................................2311.001000001
...............................................................................................................TTAGAATAGGGGAGCTTAACTTCC.............................................................................................................................................................................2411.001100000
.........................................................................................................................................................CTAAGAGCCTCGATTCTTCGAAT....................................................................................................................................2311.001000001
...............................................................................................................TTAGAATAGGGGAGCTTT...................................................................................................................................................................................1811.001000001
...............................................................................................................TTAGAATAGGGGAGCTTAACCC...............................................................................................................................................................................2211.001100000
...............................................................................................................TTAGAATAGGGGAGCTTCT..................................................................................................................................................................................1950.603000003
...............................................................................................................TTAGAATAGGGGAGCTTAATCA...............................................................................................................................................................................2220.501000001
...............................................................................................................TTAGAATAGGGGAGCTTATTC................................................................................................................................................................................2130.331000001
...............................................................................................................TTAGAATAGGGGAGCTCTC..................................................................................................................................................................................1990.111000001
...............................................................................................................TTAGAATAGGGGAGCTTCTT.................................................................................................................................................................................20130.081000100
droGri2
ATCTCATTAAAATCAT---------------TTCAGTTGAT------------------------------TAGAAGAGTGCA------------TTATGTCAAACTTATCTTAGAATAGGGGAGCTTAACTTTTATCATATTAGCGCTCGAGCTAAGATCCTCAATTCTTGGATAAGGCGACTAGCAA-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............................................................................................................TTAGAATAGGGGAGCTTAACT................................................................................................................................................................................211103.00103796
...............................................................................................................TTAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................22180.00801268
................................................................................................................TAGAATAGGGGAGCTTAACTT...............................................................................................................................................................................21115.0015510
...............................................................................................................TTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................20112.0012012
...............................................................................................................TTAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2318.00835
.............................................................................................................TCTTAGAATAGGGGAGCTT....................................................................................................................................................................................1914.00413
................................................................................................................TAGAATAGGGGAGCTTAACT................................................................................................................................................................................2013.00321
..............................................................................................................CTTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2113.00303
...............................................................................................................TTAGAATAGGGGAGCTTA...................................................................................................................................................................................1812.00220
...............................................................................................................TTAGAATAGGGGAGCTTAA..................................................................................................................................................................................1912.00202
...............................................................................................................TTAGAATAGGGGAGCTTAACTTC..............................................................................................................................................................................2312.00202
................................................................................................................TAGAATAGGGGAGCTTAAC.................................................................................................................................................................................1912.00211
..............................................................................................................CTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2212.00211
.........................................................................................................................................................CTAAGATCCTCAATTCTTGGAT.....................................................................................................................................2212.00220
.............................................................................................................TCTTAGAATAGGGGAGCTTAAC.................................................................................................................................................................................2212.00211
..........................................................................................................................................................TAAGATCCTCAATTCTTGGAT.....................................................................................................................................2112.00220
.............................................................................................................TCTTAGAATAGGGGAGCTTAACT................................................................................................................................................................................2311.00101
...............................................................................................................TTAGAATAGGGGAGCTTAACTC...............................................................................................................................................................................2211.00101
..................................................................................................................GAATAGGGGAGCTTAACT................................................................................................................................................................................1811.00101
...............................................................................................................TTAGAATAGGGGAGCTTCC..................................................................................................................................................................................1911.00101
...............................................................................................................TTAGAATAGGGGAGCTTAACC................................................................................................................................................................................2111.00101
.............................................................................................................TCTTAGAATAGGGGAGCTTT...................................................................................................................................................................................2011.00101
.........................................................................................................................................................CTAAGATCCTCAATTCTTGGA......................................................................................................................................2111.00110
........................................................................................................................................................GCTAAGATCCTCAATTCTTGG.......................................................................................................................................2111.00110
...........................................................................................................................................................AAGATCCTCAATTCTTGGAT.....................................................................................................................................2011.00110
................................................................................................................TAGAATAGGGGAGCTTAACTTT..............................................................................................................................................................................2211.00101
...............................................................................................................TTAGAATAGGGGAGCTTAACTA...............................................................................................................................................................................2211.00101
...............................................................................................................TTAGAATAGGGGAGCTTAACA................................................................................................................................................................................2111.00101

Generated: 10/20/2015 at 10:19 PM