ID:

dsi-mir-959

 Coordinate:

2l:5445697-5445788 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

antisense_to_intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.5 -26.3 -26.3

Flybase annnotation

Antisense to intron [2l_5445449_5446586_-]; utr5 [utr5_plus_808]; utr5 [utr5_plus_809]

No Repeatable elements found

Sense Strand Reads

AATGCGCCCAGTGCAGTTCAAAATGTGCCAGCGAATTAAATAGATTTTAACTTTGTTCTATATTCTTAGTACTCGGGTTGATAAAGACCTTTTCTTTGCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCAAGGATCATCGTCACGCCCACGGGTTTTGTACCACATTCAGAGT

**************************************************(((((..((((((((.((((((((....((((((((.((..........))...))))))))....)))))))).)).))))))..)))))..************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009

testis

 SRR553486

Makindu_3 day-old ovaries

 O001

Testis

 M024

male body		 SRR553485

Chicharo_3 day-old ovaries

 SRR618934

dsim w501 ovaries

 SRR902008

ovaries

 M025

embryo

 O002

Head

 M053

female body

 SRR553487

NRT_0-2 hours eggs

 M023

head

 SRR1275483

Male prepupae		 SRR553488

RT_0-2 hours eggs

 GSM343915

embryo

 SRR1275485

Male prepupae
..........................................................................................................TTGTCATCGGGGGTATTATGAA................................................................ 22 0 1 1639.00 1639 1431 37 66 63 19 4 9 2 4 1 0 0 1 1 1 0
..........................................................................................................TTGTCATCGGGGGTATTATGA................................................................. 21 0 1 1453.00 1453 851 291 77 44 138 38 2 2 4 2 1 0 1 1 1 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAA............................................................... 23 0 1 1248.00 1248 1166 33 16 21 7 0 5 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAGA......................................................................................................... 22 0 1 1122.00 1122 470 304 1 142 169 23 2 7 0 1 1 0 1 1 0 0
..........................................................................................................TTGTCATCGGGGGTATTAT................................................................... 19 0 1 850.00 850 706 2 88 49 0 1 1 0 2 0 0 1 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGA................................................................. 20 0 1 771.00 771 664 40 25 9 24 7 2 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATG.................................................................. 20 0 1 690.00 690 515 41 92 3 25 11 2 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAAA............................................................... 22 0 1 581.00 581 535 11 17 12 3 0 0 0 2 1 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAG.......................................................................................................... 21 0 1 486.00 486 274 86 17 16 66 24 1 0 0 1 0 1 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAA................................................................ 21 0 1 408.00 408 372 7 20 6 0 0 2 0 1 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAA........................................................................................................... 21 0 1 363.00 363 144 39 66 66 31 5 2 3 0 0 4 2 0 1 0 0
.................................................................TTAGTACTCGGGTTGATAAA........................................................................................................... 20 0 1 333.00 333 88 41 29 136 28 9 1 0 0 0 0 1 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATG.................................................................. 19 0 1 242.00 242 203 1 30 0 7 1 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAA............................................................................................................ 20 0 1 211.00 211 89 14 65 34 5 1 0 0 2 0 0 1 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTAT................................................................... 20 0 1 163.00 163 100 0 35 26 1 0 0 0 0 0 0 1 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAAG.......................................................................................................... 22 0 1 134.00 134 84 21 9 3 14 1 0 1 0 0 0 0 0 0 0 1
.................................................................TTAGTACTCGGGTTGATAA............................................................................................................ 19 0 1 132.00 132 39 9 29 41 8 5 0 0 1 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGA................................................................. 22 0 1 122.00 122 23 32 18 12 30 3 0 1 0 1 2 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAAA.............................................................. 24 1 1 107.00 107 102 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGT................................................................. 20 1 1 96.00 96 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATG.................................................................. 21 0 1 95.00 95 60 3 23 3 5 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGT................................................................. 21 1 1 90.00 90 88 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTA.................................................................... 18 0 1 77.00 77 4 0 55 17 0 1 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATA............................................................................................................. 19 0 1 64.00 64 24 4 9 5 19 2 0 0 0 1 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTTT................................................................... 19 1 1 64.00 64 64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTA.................................................................... 19 0 1 50.00 50 30 1 15 3 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATT.................................................................. 20 1 1 38.00 38 35 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATTT............................................................................................................ 20 2 1 38.00 38 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGAAA............................................................... 24 0 1 36.00 36 24 2 3 6 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATA............................................................................................................. 18 0 1 35.00 35 1 0 9 23 0 2 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAAGA......................................................................................................... 23 0 1 33.00 33 7 9 0 3 14 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAGAA........................................................................................................ 23 1 1 30.00 30 15 3 0 8 4 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAT................................................................ 22 1 1 30.00 30 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATT............................................................................................................. 19 1 1 30.00 30 28 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTAT................................................................... 18 0 1 29.00 29 9 0 14 4 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAAAA.............................................................. 23 1 1 27.00 27 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGAA................................................................ 23 0 1 26.00 26 8 1 4 7 3 0 0 2 0 1 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAA.......................................................................................................... 21 1 1 26.00 26 18 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATGAA................................................................ 22 1 1 24.00 24 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAT............................................................... 23 1 1 24.00 24 22 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTAA................................................................... 19 1 1 23.00 23 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAAT.............................................................. 24 0 1 21.00 21 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAAA.......................................................................................................... 22 1 1 21.00 21 20 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGTT................................................................ 22 2 1 19.00 19 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTATGAA................................................................ 22 1 1 17.00 17 14 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGT................................................................. 22 1 1 17.00 17 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATA.................................................................. 20 1 1 17.00 17 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTT.................................................................... 19 1 1 17.00 17 16 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTATGAAA............................................................... 23 1 1 16.00 16 15 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATT..................................................................... 18 0 1 16.00 16 4 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATGAAA............................................................... 23 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGTT................................................................ 21 2 1 16.00 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTAT................................................................... 19 1 1 14.00 14 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATGA................................................................. 21 1 1 13.00 13 11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCTTAGTACTCGGGTTGATAA............................................................................................................ 21 0 1 13.00 13 7 0 0 4 0 0 1 0 0 0 1 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGAT.............................................................................................................. 18 0 1 13.00 13 1 1 8 3 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTATGA................................................................. 21 1 1 13.00 13 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATTT................................................................. 21 2 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATT.................................................................. 19 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGG................................................................. 21 1 1 11.00 11 0 1 0 10 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGCATTATGAAA............................................................... 23 1 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGCATTATGAA................................................................ 22 1 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATG.................................................................. 20 1 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTATG.................................................................. 20 1 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATT............................................................................................................. 18 1 1 9.00 9 0 0 0 8 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATA.................................................................. 19 1 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTTT................................................................... 20 1 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGTTT............................................................... 22 3 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGAATTATGA................................................................. 20 1 1 8.00 8 6 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTAT................................................................... 19 1 1 8.00 8 7 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAGAAA....................................................................................................... 24 2 1 8.00 8 2 1 0 2 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAGG......................................................................................................... 22 1 1 8.00 8 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAGAC........................................................................................................ 23 0 1 7.00 7 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAGT......................................................................................................... 22 1 1 7.00 7 2 1 0 3 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAAAA............................................................. 25 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTTTT.................................................................. 20 2 3 6.33 19 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGTTT............................................................... 23 3 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAAAAA............................................................. 24 1 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGGATTATGA................................................................. 20 1 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAG............................................................... 23 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCTTAGTACTCGGGTTGATAAA........................................................................................................... 22 0 1 5.00 5 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATT.................................................................. 21 1 1 5.00 5 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGAT.............................................................................................................. 17 0 1 5.00 5 0 2 0 0 2 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTT.................................................................... 18 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAT............................................................................................................ 19 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGTA................................................................ 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGCATTATGA................................................................. 21 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGCATTATG.................................................................. 20 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGGATTATGAAA............................................................... 22 1 1 5.00 5 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAT............................................................................................................ 20 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGCATTAT................................................................... 19 1 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAAAT.............................................................. 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGACATCGGGGGTATTAT................................................................... 19 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAAT............................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTTATCGGGGGTATTATGAAA............................................................... 23 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATTAA................................................................ 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTAAA.................................................................. 20 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGAATTATGAAA............................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATGAT................................................................ 22 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATTA................................................................. 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATTAAA............................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGGCATCGGGGGTATTATGA................................................................. 21 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCTTAGTACTCGGGTTGATA............................................................................................................. 20 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GTAGTACTCGGGTTGATAAAGA......................................................................................................... 22 1 1 3.00 3 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGC................................................................. 21 1 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGTACTCGGGTTGATAA............................................................................................................ 18 0 1 3.00 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCTTAGTACTCGGGTTGAT.............................................................................................................. 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTTTT.................................................................. 19 2 3 2.33 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGTTATTATGA................................................................. 21 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTGGTACTCGGGTTGATAAA........................................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTG................................................................................................................ 16 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGGA................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGGATTAT................................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATT.................................................................. 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAG........................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATA.................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GTAGTACTCGGGTTGATAAAG.......................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AAATTTGTCATCGGGGGTATTATG.................................................................. 24 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATTAA................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTTA................................................................... 19 2 2 2.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTAGTACTCGGGTTGATAAAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCTTAGTACTCGGGTTGA............................................................................................................... 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGGATTATGAA................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATT..................................................................... 17 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGTT................................................................ 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGGATTATG.................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGTTA............................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CCTTTTCTTTGCGGAGCC....................................................................................... 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTATTACTCGGGTTGATAAAG.......................................................................................................... 21 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAT................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGGAA............................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGAAAAT........................................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATTA................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTATGAAAAA............................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATACAG.......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATGAAAA.............................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGTAA............................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAAGT......................................................................................................... 23 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGAT................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAAAT......................................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAC................................................................ 22 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTAAA.................................................................. 19 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGGTGATAAAGA......................................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGTA................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTAGGAA................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATTGGGGGTATTATG.................................................................. 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGAATTATGA................................................................. 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATAA................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTTCATCGGGGGTATTATGA................................................................. 21 1 2 1.50 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTAATCGGGGGTATTATGAAA............................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTTATCGGGGGTATTATGA................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGTGGTATTATGA................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGAACTCGGGTTGATAAAGA......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGTGGGTATTATG.................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGTACTCGGGTTGATAAAG.......................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGACT............................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TGGTCATCGGGGGTATTATGAAA............................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGTTTT.............................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAATA......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCAGGTTGATAAA........................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTTTA.................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGACATCGGGGGAATTATGAA................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGAGGGTATTAT................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATCATGAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATAGTACTCGGGTTGATAAAGA......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGTACTCGGGTTGATAAAG.......................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGTTATTATGA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACGCGGGTTGATAAAGA......................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGAATTAT................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGACACCGGGGGTATTATGAAA............................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGAAAT............................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTACTATGAA................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTTT................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGAGTACTCGGGTTGATAAAGA......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAC............................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTG.................................................................... 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CGTAGTACTCGGGTTGATAAAG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCAGCGGGGGTATTATGAA................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCGTCGGGGGTATTATGAAA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCCTCGGGGGTATTA.................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATG............................................................................................................. 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGA............................................................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CTGTCATCGGGGGTATTATGAA................................................................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................CTCGGGTTGATAAAG.......................................................................................................... 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCCGGGGTATTATGAAA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGACT............................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GTTAGTACTCGGGTTGATAAA........................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTAGTACTCGGGTTGATAAA........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAAAAC............................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATTT................................................................. 20 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGTTTA............................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTGGTCATCGGGGGTATTAT................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAATA.......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATGAAGA......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTTGTCATCGGGGGTATTA.................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGGTGATAA............................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTCGATAAAGA......................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATTGGGGGTATTATGAAA............................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCTTCGGGGGTATTATGAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TCGGGTTGATAAAGA......................................................................................................... 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................CTAGTACTCGGGTTGATAAAGA......................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTTATCGGGGGTATTATG.................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTAATCGGGGGTATTATG.................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTTCATCGGGGGTATTATGAAA............................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGACATCGGGGGTATTATAA................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGGATTAT................................................................... 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ATTGTCATCGGGGGTATTATGAAAA.............................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAATT.............................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TGGTCATCGGGGGTATTATGA................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATGA............................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGCTGATAAAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTTTTT................................................................. 22 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAATT.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAAT.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCATCGGGGGTATTATGAA................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATGT................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGAGGTATTAT................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGATGATT............................................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTATGAAG............................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTTTT.................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGCATTATGAAA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGCCATCGGGGGTATTATG.................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGATGATAA............................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGCGGGTATTATGAA................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAG................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTGTTATGA................................................................. 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCTGGTTGATAA............................................................................................................ 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTTATCGGGGGTATTA.................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCGTCGGGGGTAGTAT................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAATACTCGGGTTGATAAA........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................ACGATTAGTACTCGGGTTGATA............................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGTTT............................................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCAGGTTGATAAA........................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCCTCGGGGGCATTATGAAA............................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTAC................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTTCATCGGGGGTATTATGT................................................................. 21 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATTGGGGGTATTAT................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAGGA......................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGAATTATGAAA............................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATAATGA................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AGTCATCGGGGGTATTATGAAA............................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTAAGAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCGTCGGGGGTAGTATGAAA............................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTATGAG................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTAATCGGGGGTATTATGAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATATAGA......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................GTCATCGGGGGTATTATGAA................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGTGTATTATGA................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGGATTATA.................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTACGT................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGCTATTATT.................................................................. 20 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTG................................................................................................................ 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGATAAATT......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGCTGATAAA........................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGAAT............................................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGGTATTATGAAAA.............................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTGTCATCGGGGTTATTAT................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGAGTTGATA............................................................................................................. 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCGTCGGGGGTAGTATGAAAA.............................................................. 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGTACTCGGGTTGATAAAGA......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGCTTGATAAAG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTAGTACTCGGGTTGATAAA........................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGCCATCGGGGGTATTATGAAA............................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCAGGGGTATTATGT................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGAGTACTCGGGTTGATAAAGAAA....................................................................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATATT........................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTGTGAA................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAGTACTCGGGTTGATAAA........................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGGATTATGAAAA.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCTGGGGTATTATG.................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTGTTATG.................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGCTCAAG.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TCGTCATCGGGGGTATTATGAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGAATTATGAAAA.............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGCTTGATAA............................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GTGTCATCGGGGGTATTATGAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTATTCGGGTTGATAAA........................................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TATCATCGGGGGTATTATGAA................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGGTTGACAAAG.......................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................CTTAGTACTCGGGGTGATAAA........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCGTCGGGGGTATTATGA................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCAACGGGGGTATTATGAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGAATTATG.................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATTTTGA................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATGAAG............................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGTATATTGAA................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CTCGGGTTGATAAAGA......................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................CTTAGTACTCGGGTTGATAAT........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGCATTATGAA................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGCATTATGAT................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TGGTCATCGGGGGTATTATGAAAT.............................................................. 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGGAATTATA.................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CTGTCATCGGGGGTATTATG.................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGGGGTTATTATG.................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CGTTATCGGGGGTATTATGA................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTCATCGTGGGTATTATGA................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGTACTCGGTTTGATAA............................................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CGTAGTACTCGGGTTGATAAA........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GTGTCATCGGGGGTATTATGA................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTTATCGGGGGTATTATGA................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTCATCGGGGGTATTATAA................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTACGCGGGTCACGTCAAGTTTTACACGGTCGCTTAATTTATCTAAAATTGAAACAAGATATAAGAATCATGAGCCCAACTATTTCTGGAAAAGAAACGCCTCGGAAACAGTAGCCCCCATAATACTTTATATCAAATTTCTTCGACGTTCCTAGTAGCAGTGCGGGTGCCCAAAACATGGTGTAAGTCTCA

*************************************************(((((..((((((((.((((((((....((((((((.((..........))...))))))))....)))))))).)).))))))..)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487

NRT_0-2 hours eggs

 SRR553486

Makindu_3 day-old ovaries

 SRR553485

Chicharo_3 day-old ovaries

 SRR902009

testis

 GSM343915

embryo

 SRR553488

RT_0-2 hours eggs
.............GTCAAGTTTTACCCGTTCGCT.............................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0
...........ACGTCAAGTTTTACA...................................................................................................................................................................... 15 0 2 0.50 1 0 1 0 0 0 0
............CGTCAAGTTTTACAA..................................................................................................................................................................... 15 1 20 0.25 5 0 0 5 0 0 0
.........................................................................................AAAAAAAACGCCTCGGAAGAA.................................................................................. 21 3 14 0.14 2 0 0 0 2 0 0
.........TGACGTGAAGTTGTACACGGT.................................................................................................................................................................. 21 3 8 0.13 1 0 0 0 0 1 0
......................................................................................................................................................TCTAGTCGCAGTGCGGG......................... 17 2 11 0.09 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 2l:5445647-5445838 + dsi-mir-959 Known_mirbase AATGCGCCCAGT-------------GCAGTTCAAAATGTGC------------------------------------CA--G----------CGAATTAAATAGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT--T----TGCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCA---------------------------------------AG------------GATCATCG----------------TCA---CGCCCAC-------------------GGGTTTTGTACCACATTCAGAGT
droSec2 scaffold_5:3718635-3718826 + dse_42 confident AATGCGCCCAGT-------------GCAGTTCAAAATGTGC------------------------------------CA--G----------CGAATTAAATAGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT--T----TGCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCA---------------------------------------AG------------GATCATCG----------------TAC---CGCCCAC-------------------GGGTTTTGTACCACATTCTGAGT
dm3 chr2L:5640875-5641085 + dme-mir-959 Known_mirbase AATGTGCCCAGTGG---ATGCTAAAGCAGTGCAAAATGTGC------------------------------------CA--GCGGG-GGCCCCGAATTAAATTGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT--T----CAGGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAACTGCA---------------------------------------AT------------GATTATCG----------------TAC---CGCCCAC-------------------GGGTTTTGTACCACATTCTGAGT
droEre2 scaffold_4929:5729375-5729559 + der_33 confident AATGCGACC------------------AGTGCAAATGGGGC------------------------------------C-------------TCGAGTTAAATTGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGAGCTTTCC---T----TGCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------------------------------------AG------------GAGCAACG----------------CAC---CGCCCGC-------------------GTTTTTTGTGCCAGATTCAGAGT
droYak3 2L:13552222-13552401 - dya_29 confident AATGTGCCCAGTGG---ATC---------------CC------------------------------------------------------GCGAGTTAAATTGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCC---T----TGCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------------------------------------AG------------GATCATCG----------------CTT---CGCCCGC-------------------GTGTTTTGTACCAGATTCTGAGT
droEug1 scf7180000409063:317179-317394 + AATGCCCCTAACCG---ATGC-AAAATAGTGGAAACTGTGC------------------------------------CA--GAGAGGAGG-CCGTGTAAAATTGAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCC---T----TGAGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCC---------------------------------------GA------------GCTCATCCTTCCTGC---------TAC---CTACCGC-------------------GATGTTTGTGCTACATTCTGAGT
droBia1 scf7180000302422:3830427-3830633 + AATGCGCCTAACCGCCGATGC-AAAGTAGTGGAAAATGTGC------------------------------------CA--GCCCCTGGGCTTATGTAAAATTAAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGC---A----TTGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAGACTGCA---------------------------------------AC------------GCGAA-------------------------GGACCGT-------------------GAGCTTTGCGCCAGATTCTGAGT
droTak1 scf7180000415871:385160-385370 + AATGCGCCTAACCG---ATGC-AAAATAGTGGAAAATGTGC------------------------------------CACAGCCGGGAGGCTTATGTTAAATTCAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTT-CA---T----CGGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------------------------------------AG------------GCTCAGCA----------------TGC---CGACCTC-------------------GAGTTTTGTGCTAGATTCTGAGT
droEle1 scf7180000490753:30069-30278 + AATGCGCCTAGCCG---ATGA-AAAGTAGTGCAAACTGTGC------------------------------------CG--ACCCGGAGGCCCGTGTTAAATTGAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCCTTCC---T----CGCGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGA---------------------------------------AG------------GTGTGCTG----------------TGC---CAATCGC-------------------GAGCTTTGTGCTAGATTCTGAGT
droRho1 scf7180000778253:34036-34233 - AATGCGCCTAACCG---ATGA-GAATTAGTGGAAACTGTGC------------------------------------CC--------------ATGCTAGATGGAT---TTCAA-------------------TGTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCC---T----TGAGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGA---------------------------------------AG------------GCCCATCG----------------CAC---CAATCTC-------------------AAGTTTTGTGCTAGATTCTGAGT
droFic1 scf7180000453932:197750-197929 - AAT------------------------AGTGGAAACTGTGC------------------------------------CA--GC------------CTTGAATTGAT---TTCGG-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGC---T----TGGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------GGCCAA-------------------------------------------TCG----------------CTCGAGTGACCGT-------------------GAGTTTTGTGCTACTTTCTGAGT
droKik1 scf7180000302389:431151-431368 - AATGCGCCTAACCG---GTGG-AAAATAGTGGAAAATG-----GTGAAAA-ACGGCAGAAAACGGTGGAAACTGGGCC---------------AGGTTAAATTGAT---TTCCA-------------------TTTTGTTCCACATTCTTAATACT------CGGGTTGGCAAAGACCTTTCC---A----GGAGGCGCCTTTGTCATCGGGGGTATTATGAAATATGGTCCAAAGCAACTGCA---------------------------------------GGCGGTAGTG----AATC-------------------------------------------------------ATTTGTGCCAGGTTCTGAGT
droAna3 scaffold_12916:11084653-11084885 + dan_32 confident GGCACGGCTAACTG---GTGG-AAAATTGTGGCCAA-----CAATG--------------------------T----CG--GCCAG--GGTGGAAGTTAAATTTAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCC---T----GGAGCCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAAACCAGCACAATGTATCGGCCAATAGGCCAATTAACC------------------------------CG----------------GACCAATCAATAT-------------------GAGTTTTGTGCCAGATTCTGAGT
droBip1 scf7180000396572:742410-742634 + GGCACGGCTAACTG---GTGG-AAAATTGTGGCCAA-----CAATG--------------------------T----CG--GCCAG---GGTAAAGTTAAATTTAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGAGCTATCC---T----GGAGCTGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAACACACCACAACGCATCGGCCAA-------------------------------------------TCGATCCCACTAATCAATAT----------AC-------------------GAGTTTTGTGCCAGATTCTGAGT
dp5 4_group4:3182546-3182787 - dps-mir-959 Known_mirbase AATCTTCGGTACTC-----------GTAGTGAAAAATGTGT------------------------------------TC-------------AAAGTGAAATTGGT---TTTCGTTTACGTTTT-TTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCG---TAGTGTGAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACA--CAAAAA-----------------------------------------------------------ATATACACGTAAATGTGTGTGGGTGTGCGTGTGTGCGGGTGTGTGCTATATTCTGAGT
droPer2 scaffold_10:2201477-2201711 - dpe_32 confident AATCTTCGGTACTC-----------GTAGTGAAAAATGTGT------------------------------------TC-------------AAAGTGAAATTGGT---TTTCGTTCACGTTTTTTTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCG---TAGTGTGAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACA--CAAAAA-----------------------------------------------------------ATATACACGTAAATGTGTGTGGGTGT--------GCGGGTGTGTTCTATATTCTGAGT
droWil2 scf2_1100000004521:8626240-8626442 - dwi_198 confident AATGTGCAAAAACA---GTT------TAGTG-----------------------------------------------------------------AAAAAGTGAC---TTAAG-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACAAAATGTTTA----CCAATCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAGTTCAACATAATAAT--TAAGAA--------TTAACTTTGAATTGGAAACGATATTGAAATG---------------------------------------------------------AATTTATGCTAAATTCTGAGT
droVir3 scaffold_12963:3615186-3615191 + AATGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:14018117-14018119 + AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:3146857-3147030 + AATGTGTAAAAC-G---GTAA-GGAGTGATGCATGTAATGG---CAAAAATACCTCAAAGAGTAG------------CA--------------GGAGTAGTTAAGTTGTAGTTTCTTACGGTTTTTTTTTTAATAACATGC------TTTAGTGCTTCAATGTAGGTGGCTCAAGATATTTGT--------TGATTGGC----------------------------------------------------------------------------------------------------------------------------------------------------------CTTGGTTATGCTAAATTCCAAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATGCGCCCAGT-------------GCAGTTCAAAATGTGC------------------------------------CA--G----------CGAATTAAATAGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT--T----TGCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCA---------------------------------------AG------------GATCATCG----------------TCA---CGCCCAC-------------------GGGTTTTGTACCACATTCAGAGTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA.........................................................................................................................................................2211639.001639063216641937014191431001
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA..........................................................................................................................................................2111453.00145304422774138291113812851001
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA........................................................................................................................................................2311248.00124802100160733000051166000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................2211122.00112201427110169304112302470001
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAT............................................................................................................................................................191850.00850149008820200101706000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGA..........................................................................................................................................................201771.007710900250244000702664000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATG...........................................................................................................................................................201690.0069003009212541001102515000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA........................................................................................................................................................221581.005810120117231100000535000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................211486.00486116011706686002401274000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA.........................................................................................................................................................211408.0040806002010700002372000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................211363.0036326630660313941502144000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................201333.0033311360029028410090188000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATG...........................................................................................................................................................191242.0024200003007100100203000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................201211.00211134006525140010089000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT............................................................................................................................................................201163.00163126003501000000100000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................221134.0013403109014210010084010
....................................................................................................................................................TTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................191132.0013204100291890050039000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA..........................................................................................................................................................221122.001220121118030322030023000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................241107.001070200000300000102000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGT..........................................................................................................................................................20196.0096000000000000096000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG...........................................................................................................................................................21195.00950300230530010060000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT..........................................................................................................................................................21190.0090020000000000088000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTA.............................................................................................................................................................18177.00770170055000001004000
...................................................................................................................................................CTTAGTACT------CGGGTTGATA............................................................................................................................................................................................................19164.00640501901940020024000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTA.............................................................................................................................................................19150.00500300150010010030000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATT...........................................................................................................................................................20138.0038030000000000035000
...................................................................................................................................................CTTAGTACT------CGGGTTGATTT...........................................................................................................................................................................................................20138.0038000000000000038000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA........................................................................................................................................................24136.0036061030020000024000
....................................................................................................................................................TTAGTACT------CGGGTTGATA............................................................................................................................................................................................................18135.0035023009000002001000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................23133.0033030000149000007000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.......................................................................................................................................................................................................23130.0030080000430000015000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAT.........................................................................................................................................................22130.0030000000000000030000
...................................................................................................................................................CTTAGTACT------CGGGTTGATT............................................................................................................................................................................................................19130.0030020000000000028000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTAT............................................................................................................................................................18129.0029040014110000009000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................23127.0027000000000000027000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA.........................................................................................................................................................23126.002607214031000008000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAA.........................................................................................................................................................................................................21126.0026050000300000018000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT........................................................................................................................................................23124.0024020000000000022000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAA............................................................................................................................................................19123.0023000000000000023000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT.......................................................................................................................................................24121.0021000000000000021000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAA.........................................................................................................................................................................................................22121.0021010000000000020000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTT.........................................................................................................................................................22119.0019000000000000019000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT..........................................................................................................................................................22117.0017000000010000016000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATA...........................................................................................................................................................20117.0017000000000000017000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTT.............................................................................................................................................................19117.0017010000000000016000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATT..............................................................................................................................................................18116.0016020010000000004000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGTT.........................................................................................................................................................21116.0016000000000000016000
..................................................................................................................................................TCTTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................21113.001304000000100017000
...................................................................................................................................................CTTAGTACT------CGGGTTGAT.............................................................................................................................................................................................................18113.001303008001000001000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATTT..........................................................................................................................................................21112.0012000000000000012000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATT...........................................................................................................................................................19112.0012000000000000012000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG..........................................................................................................................................................21111.0011010000001000000000
....................................................................................................................................................TTAGTACT------CGGGTTGATT............................................................................................................................................................................................................1819.00918000000000000000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATA...........................................................................................................................................................1919.00900000000000009000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGTTT........................................................................................................................................................2218.00800000000000008000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAAA......................................................................................................................................................................................................2418.00802000031000002000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGG........................................................................................................................................................................................................2218.00808000000000000000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAC.......................................................................................................................................................................................................2317.00700006000001000000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................2217.00703000011000002000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTTT........................................................................................................................................................2316.00600000000000006000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAG........................................................................................................................................................2315.00500000000000005000
..................................................................................................................................................TCTTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................2215.00501000000000004000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATT...........................................................................................................................................................2115.00501000000000004000
....................................................................................................................................................TTAGTACT------CGGGTTGAT.............................................................................................................................................................................................................1715.00500000022001000000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTT.............................................................................................................................................................1815.00500000000000005000
....................................................................................................................................................TTAGTACT------CGGGTTGATAT...........................................................................................................................................................................................................1915.00500000000000005000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAT...........................................................................................................................................................................................................2015.00500000000000005000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAT.......................................................................................................................................................2314.00400000000000004000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAT........................................................................................................................................................2214.00400000000000004000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAAA...........................................................................................................................................................2013.00300000000000003000
..................................................................................................................................................TCTTAGTACT------CGGGTTGATA............................................................................................................................................................................................................2013.00301000000000002000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGC..........................................................................................................................................................2113.00301000000000002000
.....................................................................................................................................................TAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................1813.00302001000000000000
..................................................................................................................................................TCTTAGTACT------CGGGTTGAT.............................................................................................................................................................................................................1913.00300000000000003000
...................................................................................................................................................CTTAGTACT------CGGGTTG...............................................................................................................................................................................................................1612.00200000000001001000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAG..........................................................................................................................................................................................................2112.00200000000000002000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATA...........................................................................................................................................................2112.00200000000000002000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTTA............................................................................................................................................................1922.00400000000000004000
..................................................................................................................................................TCTTAGTACT------CGGGTTGA..............................................................................................................................................................................................................1812.00200001000000001000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATT..............................................................................................................................................................1712.00200000000001001000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGTT.........................................................................................................................................................2312.00200000000000002000
................................................................................................................................................................................CCTTTTCT--T----TGCGGAGCC................................................................................................................................................................................1812.00202000000000000000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAT.........................................................................................................................................................2112.00200000000000002000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................2312.00200000011000000000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAT.........................................................................................................................................................2312.00200000000000002000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAAT........................................................................................................................................................................................................2212.00200000000000002000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAC.........................................................................................................................................................2212.00201000000000001000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTAAA...........................................................................................................................................................1912.00200000000000002000
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................2011.00100010000000000000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGACT........................................................................................................................................................2311.00100000000000001000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAC........................................................................................................................................................2311.00100000000000001000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTG.............................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................TTAGTACT------CGGGTTGATG............................................................................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................TTAGTACT------CGGGTTGA..............................................................................................................................................................................................................1611.00100000001000000000
..........................................................................................................................................................CT------CGGGTTGATAAAG.........................................................................................................................................................................................................1511.00100000000001000000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGACT........................................................................................................................................................2411.00101000000000000000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAAC......................................................................................................................................................2511.00100000000000001000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATTT..........................................................................................................................................................2021.00200000000000002000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAATA.........................................................................................................................................................................................................2211.00100000000000001000
...........................................................................................................................................................T------CGGGTTGATAAAGA........................................................................................................................................................................................................1511.00100000000001000000
....................................................................................................................................................TTAGTACT------CGGGTTGATAATT.........................................................................................................................................................................................................2111.00100000000000001000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAT.........................................................................................................................................................................................................2211.00100000000000001000
............................................................................................................................................................................................................TCATCGGGGGTATTATGAA.........................................................................................................................................................1911.00100000000000001000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAG.........................................................................................................................................................2111.00100000000000001000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTAC............................................................................................................................................................2011.00101000000000000000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAG.........................................................................................................................................................2211.00101000000000000000
...........................................................................................................................................................................................................GTCATCGGGGGTATTATGAA.........................................................................................................................................................2011.00100000000000001000
....................................................................................................................................................TTAGTACT------CGGGTTG...............................................................................................................................................................................................................1511.00100000000001000000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAATT........................................................................................................................................................................................................2211.00100000000000001000
...................................................................................................................................................CTTAGTACT------CGGGTTGAAT............................................................................................................................................................................................................1911.00100000000000001000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................2511.00100000000000001000
...................................................................................................................................................CTTAGTACT------CGGGTTGATATT..........................................................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................TAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................1911.00100000000000001000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAG........................................................................................................................................................2211.00100000000000010000
..........................................................................................................................................................CT------CGGGTTGATAAAGA........................................................................................................................................................................................................1611.00100000000001000000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAT..........................................................................................................................................................................................................2111.00100000000000001000
droSec2
AATGCGCCCAGT-------------GCAGTTCAAAATGTGC------------------------------------CA--G----------CGAATTAAATAGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT--T----TGCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCA---------------------------------------AG------------GATCATCG----------------TAC---CGCCCAC-------------------GGGTTTTGTACCACATTCTGAGTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................221376.00376325210714
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................211248.002482221169
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA..........................................................................................................................................................211199.0019931601818
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA..........................................................................................................................................................22167.0067049144
....................................................................................................................................................TTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................20166.006606222
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................22163.006305841
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................21153.005304481
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGA..........................................................................................................................................................20144.004413463
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATG...........................................................................................................................................................20137.003732941
...................................................................................................................................................CTTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................20129.002902810
...................................................................................................................................................CTTAGTACT------CGGGTTGATA............................................................................................................................................................................................................19119.001901405
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA.........................................................................................................................................................22115.00151761
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................23112.00120660
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA........................................................................................................................................................22112.00121380
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG...........................................................................................................................................................21110.00100703
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA........................................................................................................................................................23110.00100541
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.......................................................................................................................................................................................................23110.00100910
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA.........................................................................................................................................................2319.0092151
....................................................................................................................................................TTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................1918.0080800
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAA.........................................................................................................................................................................................................2117.0070502
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATG...........................................................................................................................................................1917.0070421
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................2215.0050500
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA........................................................................................................................................................2414.0040310
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA.........................................................................................................................................................2114.0040130
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAT.........................................................................................................................................................................................................2113.0030300
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAAA......................................................................................................................................................................................................2413.0030210
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT............................................................................................................................................................2013.0030300
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT..........................................................................................................................................................2213.0030201
....................................................................................................................................................TTAGTACT------CGGGTTGATAAT..........................................................................................................................................................................................................2012.0020200
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAT.......................................................................................................................................................................................................2312.0020101
..................................................................................................................................................TCTTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................2112.0020200
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAT............................................................................................................................................................1912.0020101
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................2311.0010100
.....................................................................................................................................................TAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................1911.0010001
...................................................................................................................................................CTTAGTACT------CGGGTTGAT.............................................................................................................................................................................................................1811.0010001
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATT...........................................................................................................................................................1911.0010100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT........................................................................................................................................................2311.0010001
....................................................................................................................................................TTAGTACT------CGGGTTGATAAGA.........................................................................................................................................................................................................2111.0010010
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGC........................................................................................................................................................................................................2211.0010100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT..........................................................................................................................................................2111.0010100
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAC.........................................................................................................................................................2311.0010010
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT.......................................................................................................................................................2411.0010010
......................................................................................................................................................AGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................1911.0010100
....................................................................................................................................................TTAGTACT------CGGGTTGATTT...........................................................................................................................................................................................................1920.5010100
....................................................................................................................................................TTAGTACT------CGGGTTGATCC...........................................................................................................................................................................................................1930.3310001
dm3
AATGTGCCCAGTGG---ATGCTAAAGCAGTGCAAAATGTGC------------------------------------CA--GCGGG-GGCCCCGAATTAAATTGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTTCT--T----CAGGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAACTGCA---------------------------------------AT------------GATTATCG----------------TAC---CGCCCAC-------------------GGGTTTTGTACCACATTCTGAGTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
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.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................24112.0012000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000203000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGG........................................................................................................................................................................................................22112.0012000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000201100000000000000000010000000000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAC.........................................................................................................................................................................................................21112.0012000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000020000000000000000000000000421100000000000000000000000000000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAT.........................................................................................................................................................................................................22111.0011000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000002000000200000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000001100000000000000001000000000000
droEre2
AATGCGACC------------------AGTGCAAATGGGGC------------------------------------C-------------TCGAGTTAAATTGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGAGCTTTCC---T----TGCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------------------------------------AG------------GAGCAACG----------------CAC---CGCCCGC-------------------GTTTTTTGTGCCAGATTCAGAGTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA..........................................................................................................................................................2111566.0015667120013871510
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGA........................................................................................................................................................................................................221663.006631032605520
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAG.........................................................................................................................................................................................................211499.004990020459380
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATG...........................................................................................................................................................201311.003116070275230
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA.........................................................................................................................................................221219.00219205020570
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAG.........................................................................................................................................................................................................221147.001471021128150
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA........................................................................................................................................................231102.0010200109290
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA..........................................................................................................................................................22187.008700008430
....................................................................................................................................................TTAGTACT------CGGGTTGACAAA..........................................................................................................................................................................................................20186.0086002074100
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGA..........................................................................................................................................................20174.007410106750
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAA..........................................................................................................................................................................................................21160.006001005180
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG...........................................................................................................................................................21131.003100102910
..................................................................................................................................................TCTTAGTACT------CGGGTTGACA............................................................................................................................................................................................................20131.003100102640
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT..........................................................................................................................................................21127.002700102600
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATG...........................................................................................................................................................19126.002600202220
...................................................................................................................................................CTTAGTACT------CGGGTTGACA............................................................................................................................................................................................................19125.002500002320
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGAA.......................................................................................................................................................................................................23121.002100002100
...................................................................................................................................................CTTAGTACT------CGGGTTGACAA...........................................................................................................................................................................................................20118.001800111420
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGT........................................................................................................................................................................................................22116.001600001600
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAT............................................................................................................................................................19115.001510201200
....................................................................................................................................................TTAGTACT------CGGGTTGACAA...........................................................................................................................................................................................................19111.00110000920
..................................................................................................................................................TCTTAGTACT------CGGGTTGACAAA..........................................................................................................................................................................................................2219.0090000540
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT........................................................................................................................................................2318.0080010700
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................2418.0080000710
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAA.........................................................................................................................................................................................................2117.0070000700
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA.........................................................................................................................................................2116.0060000600
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT..........................................................................................................................................................2216.0060000510
..................................................................................................................................................TCTTAGTACT------CGGGTTGACAA...........................................................................................................................................................................................................2115.0050000320
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA........................................................................................................................................................2215.0050000500
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAGT........................................................................................................................................................................................................2314.0040000400
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAGA........................................................................................................................................................................................................2313.0030000210
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGAT.......................................................................................................................................................................................................2313.0030000300
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTT.........................................................................................................................................................2213.0030000210
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA.........................................................................................................................................................2313.0030000300
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGAAA......................................................................................................................................................................................................2413.0030000300
..................................................................................................................................................TCTTAGTACT------CGGGTTGAC.............................................................................................................................................................................................................1913.0030000210
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT............................................................................................................................................................2013.0030000300
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGT..........................................................................................................................................................2012.0020000200
....................................................................................................................................................TTAGTACT------CGGGTTGACA............................................................................................................................................................................................................1812.0020000110
.....................................................................................................................................................TAGTACT------CGGGTTGACAAAGA........................................................................................................................................................................................................2112.0020000200
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAA.........................................................................................................................................................................................................2212.0020000020
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAT.........................................................................................................................................................................................................2112.0020000110
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA........................................................................................................................................................2411.0010000100
.....................................................................................................................................................TAGTACT------CGGGTTGACAAAG.........................................................................................................................................................................................................2011.0010000100
...............................................................................................................................................................................AGCTTTCC---T----TGCGGCGCCT...............................................................................................................................................................................1911.0010000100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATT...........................................................................................................................................................2011.0010010000
......................................................................................................................................................AGTACT------CGGGTTGACAAAGT........................................................................................................................................................................................................2011.0010000010
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAT.........................................................................................................................................................2211.0010000100
....................................................................................................................................................TTAGTACT------CGGGTTGACATT..........................................................................................................................................................................................................2011.0010000100
..................................................................................................................................................TCTTAGTACT------CGGGTTGACT............................................................................................................................................................................................................2011.0010000100
....................................................................................................................................................TTAGTACT------CGGGTTGACT............................................................................................................................................................................................................1811.0010000100
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGAAG......................................................................................................................................................................................................2411.0010000100
....................................................................................................................................................TTAGTACT------CGGGTTGACAAGA.........................................................................................................................................................................................................2111.0010000100
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGC..........................................................................................................................................................2011.0010000100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTA.............................................................................................................................................................1811.0010000100
...................................................................................................................................................CTTAGTACT------CGGGTTGAC.............................................................................................................................................................................................................1811.0010000010
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAAT......................................................................................................................................................2511.0010000100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT.......................................................................................................................................................2411.0010000100
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAC..........................................................................................................................................................................................................2111.0010000100
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAAT.......................................................................................................................................................2311.0010000001
..................................................................................................................................................TCTTAGTACT------CGGGTTGACAT...........................................................................................................................................................................................................2111.0011000000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG..........................................................................................................................................................2111.0010000010
...................................................................................................................................................CTTAGTACT------CGGGTTGACT............................................................................................................................................................................................................1911.0010000100
..................................................................................................................................................TCTTAGTACT------CGGGTTGACAAATT........................................................................................................................................................................................................2411.0010000100
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAT.........................................................................................................................................................2311.0010000010
....................................................................................................................................................TTAGTACT------CGGGTTGACAAT..........................................................................................................................................................................................................2011.0010000010
...........................................................................................................................................................................................................GTCATCGGGGGTATTATGA..........................................................................................................................................................1911.0010000010
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGATT........................................................................................................................................................2311.0010000100
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAGTT.......................................................................................................................................................................................................2411.0010000100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAC.......................................................................................................................................................2411.0010010000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAATT.........................................................................................................................................................................................................2211.0010000100
droYak3
AATGTGCCCAGTGG---ATC---------------CC------------------------------------------------------GCGAGTTAAATTGAT---TTTAA-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCC---T----TGCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------------------------------------AG------------GATCATCG----------------CTT---CGCCCGC-------------------GTGTTTTGTACCAGATTCTGAGTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA..........................................................................................................................................................211289.002898521122632050
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAG.........................................................................................................................................................................................................211179.001790300001750010
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGA........................................................................................................................................................................................................221164.001642410001560010
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAA..........................................................................................................................................................................................................211104.00104521000960000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAG.........................................................................................................................................................................................................22196.0096111000921000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATG...........................................................................................................................................................20186.0086150021770000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGA..........................................................................................................................................................20175.0075340000680000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA.........................................................................................................................................................22141.0041910010222060
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA........................................................................................................................................................23131.00311000001172010
...................................................................................................................................................CTTAGTACT------CGGGTTGACAA...........................................................................................................................................................................................................20131.0031530000230000
....................................................................................................................................................TTAGTACT------CGGGTTGACAAA..........................................................................................................................................................................................................20130.0030100000290000
...................................................................................................................................................CTTAGTACT------CGGGTTGACA............................................................................................................................................................................................................19126.0026350010170000
..................................................................................................................................................TCTTAGTACT------CGGGTTGACA............................................................................................................................................................................................................20120.0020310000160000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAT............................................................................................................................................................19118.0018104000040000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA..........................................................................................................................................................22114.0014200000120000
..................................................................................................................................................TCTTAGTACT------CGGGTTGACAAA..........................................................................................................................................................................................................22113.0013000000130000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATG...........................................................................................................................................................1919.00901000080000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT..........................................................................................................................................................2118.00813000040000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA.........................................................................................................................................................2117.00730000040000
..................................................................................................................................................TCTTAGTACT------CGGGTTGACAA...........................................................................................................................................................................................................2116.00640000020000
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGT........................................................................................................................................................................................................2215.00500001040000
....................................................................................................................................................TTAGTACT------CGGGTTGACAA...........................................................................................................................................................................................................1915.00530000020000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA........................................................................................................................................................2214.00410000020010
....................................................................................................................................................TTAGTACT------CGGGTTGACA............................................................................................................................................................................................................1814.00420000200000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAA.........................................................................................................................................................................................................2213.00300000030000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG...........................................................................................................................................................2113.00310000020000
...................................................................................................................................................CTTAGTACT------CGGGTTGAC.............................................................................................................................................................................................................1813.00330000000000
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAA.........................................................................................................................................................................................................2113.00300000030000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT............................................................................................................................................................2013.00310000020000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATA...........................................................................................................................................................2013.00311000010000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGT..........................................................................................................................................................2012.00200000020000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTA.............................................................................................................................................................1812.00220000000000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAGT........................................................................................................................................................................................................2312.00200000020000
...................................................................................................................................................CTTAGTACT------CGGGTTGACT............................................................................................................................................................................................................1911.00100000010000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAG..........................................................................................................................................................................................................2111.00100000010000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGG..........................................................................................................................................................2011.00100000010000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAT..........................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA........................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................GTCATCGGGGGTATTATG...........................................................................................................................................................1811.00101000000000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAT.......................................................................................................................................................2411.00110000000000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGC..........................................................................................................................................................2011.00100000010000
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGG........................................................................................................................................................................................................2211.00100000010000
..................................................................................................................................................TCTTAGTACT------CGGGTTGACAAAA.........................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................TAGTACT------CGGGTTGACAAAG.........................................................................................................................................................................................................2011.00101000000000
..................................................................................................................................................TCTTAGTACT------CGGGTTGAC.............................................................................................................................................................................................................1911.00100000010000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAT.........................................................................................................................................................2311.00100000001000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATT...........................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGC..........................................................................................................................................................2111.00100000010000
....................................................................................................................................................TTAGTACT------CGGGTTGACAAAGAA.......................................................................................................................................................................................................2311.00100000010000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAT.........................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGTT.........................................................................................................................................................2211.00101000000000
....................................................................................................................................................TTAGTACT------CGGGTTGACAT...........................................................................................................................................................................................................1911.00110000000000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAC.........................................................................................................................................................................................................2211.00100000010000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAC..........................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG..........................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................2411.00110000000000
...................................................................................................................................................CTTAGTACT------CGGGTTGACAAAAT........................................................................................................................................................................................................2311.00100000010000
droEug1
AATGCCCCTAACCG---ATGC-AAAATAGTGGAAACTGTGC------------------------------------CA--GAGAGGAGG-CCGTGTAAAATTGAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCTTTCC---T----TGAGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCC---------------------------------------GA------------GCTCATCCTTCCTGC---------TAC---CTACCGC-------------------GATGTTTGTGCTACATTCTGAGTSizeHit CountTotal NormTotal
No Reads
droBia1
AATGCGCCTAACCGCCGATGC-AAAGTAGTGGAAAATGTGC------------------------------------CA--GCCCCTGGGCTTATGTAAAATTAAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGC---A----TTGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAGACTGCA---------------------------------------AC------------GCGAA-------------------------GGACCGT-------------------GAGCTTTGCGCCAGATTCTGAGTSizeHit CountTotal NormTotal
No Reads
droTak1
AATGCGCCTAACCG---ATGC-AAAATAGTGGAAAATGTGC------------------------------------CACAGCCGGGAGGCTTATGTTAAATTCAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTT-CA---T----CGGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------------------------------------AG------------GCTCAGCA----------------TGC---CGACCTC-------------------GAGTTTTGTGCTAGATTCTGAGTSizeHit CountTotal NormTotal
No Reads
droEle1
AATGCGCCTAGCCG---ATGA-AAAGTAGTGCAAACTGTGC------------------------------------CG--ACCCGGAGGCCCGTGTTAAATTGAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGACAAAGACCCTTCC---T----CGCGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGA---------------------------------------AG------------GTGTGCTG----------------TGC---CAATCGC-------------------GAGCTTTGTGCTAGATTCTGAGTSizeHit CountTotal NormTotal
No Reads
droRho1
AATGCGCCTAACCG---ATGA-GAATTAGTGGAAACTGTGC------------------------------------CC--------------ATGCTAGATGGAT---TTCAA-------------------TGTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCC---T----TGAGGCGGCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGGA---------------------------------------AG------------GCCCATCG----------------CAC---CAATCTC-------------------AAGTTTTGTGCTAGATTCTGAGTSizeHit CountTotal NormTotal
No Reads
droFic1
AAT------------------------AGTGGAAACTGTGC------------------------------------CA--GC------------CTTGAATTGAT---TTCGG-------------------CTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTGC---T----TGGGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCA---------GGCCAA-------------------------------------------TCG----------------CTCGAGTGACCGT-------------------GAGTTTTGTGCTACTTTCTGAGTSizeHit CountTotal NormTotal
No Reads
droKik1
AATGCGCCTAACCG---GTGG-AAAATAGTGGAAAATG-----GTGAAAA-ACGGCAGAAAACGGTGGAAACTGGGCC---------------AGGTTAAATTGAT---TTCCA-------------------TTTTGTTCCACATTCTTAATACT------CGGGTTGGCAAAGACCTTTCC---A----GGAGGCGCCTTTGTCATCGGGGGTATTATGAAATATGGTCCAAAGCAACTGCA---------------------------------------GGCGGTAGTG----AATC-------------------------------------------------------ATTTGTGCCAGGTTCTGAGTSizeHit CountTotal NormTotal
No Reads
droAna3
GGCACGGCTAACTG---GTGG-AAAATTGTGGCCAA-----CAATG--------------------------T----CG--GCCAG--GGTGGAAGTTAAATTTAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACCTTTCC---T----GGAGCCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAAACCAGCACAATGTATCGGCCAATAGGCCAATTAACC------------------------------CG----------------GACCAATCAATAT-------------------GAGTTTTGTGCCAGATTCTGAGTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA..........................................................................................................................................................211326.0032613001328416
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................221292.00292300725824
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................211186.00186400016517
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATG...........................................................................................................................................................20198.009815006761
....................................................................................................................................................TTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................20154.00541001493
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................22151.00512001462
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGA..........................................................................................................................................................20132.00326001232
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA..........................................................................................................................................................22130.00302000235
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................21129.00290000281
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA.........................................................................................................................................................22125.00253001210
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG...........................................................................................................................................................21124.00240002193
...................................................................................................................................................CTTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................20123.00230002192
...................................................................................................................................................CTTAGTACT------CGGGTTGATA............................................................................................................................................................................................................19117.00172000132
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................23114.00141000121
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA........................................................................................................................................................23113.0013400180
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATG...........................................................................................................................................................19111.0011200171
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................22111.00110000101
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT..........................................................................................................................................................2118.008100160
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA.........................................................................................................................................................2117.007200230
....................................................................................................................................................TTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................1916.006000060
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAT............................................................................................................................................................1916.006200130
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAT.........................................................................................................................................................................................................2116.006000060
...................................................................................................................................................CTTAGTACT------CGGGTTGATT............................................................................................................................................................................................................1915.005100040
....................................................................................................................................................TTAGTACT------CGGGTTGATAAT..........................................................................................................................................................................................................2014.004000040
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................2314.004000040
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGC..........................................................................................................................................................2213.003100020
..................................................................................................................................................TCTTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................2113.003000120
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGTT.......................................................................................................................................................................................................2313.003000030
..................................................................................................................................................TCTTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................2213.003100020
..................................................................................................................................................TCTTAGTACT------CGGGTTGATA............................................................................................................................................................................................................2013.003000030
....................................................................................................................................................TTAGTACT------CGGGTTGATATT..........................................................................................................................................................................................................2013.003000030
....................................................................................................................................................TTAGTACT------CGGGTTGATA............................................................................................................................................................................................................1813.003000201
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGC..........................................................................................................................................................2113.003000120
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGT..........................................................................................................................................................2213.003000030
...................................................................................................................................................CTTAGTACT------CGGGTTGATAT...........................................................................................................................................................................................................2012.002000110
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.......................................................................................................................................................................................................2312.002000020
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAT........................................................................................................................................................2312.002000020
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTT.............................................................................................................................................................1912.002000020
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA........................................................................................................................................................2212.002000020
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT............................................................................................................................................................2012.002000020
..................................................................................................................................................TCTTAGTACT------CGGGTTGAT.............................................................................................................................................................................................................1912.002000020
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAC........................................................................................................................................................2312.002000020
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA.........................................................................................................................................................2312.002000110
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGT..........................................................................................................................................................2011.001000010
....................................................................................................................................................TTAGTACT------CGGGTTGATAAATT........................................................................................................................................................................................................2211.001000010
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATT...........................................................................................................................................................2111.001000010
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAT.......................................................................................................................................................................................................2311.001000001
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................2511.001000010
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................2011.001000010
....................................................................................................................................................TTAGTACT------CGGGTTGATAAATG........................................................................................................................................................................................................2211.001000010
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................2111.001000010
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGATT......................................................................................................................................................................................................2411.001000010
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAA.........................................................................................................................................................................................................2211.001000010
....................................................................................................................................................TTAGTACT------CGGGTTGATAT...........................................................................................................................................................................................................1911.001000010
..................................................................................................................................................TCTTAGTACT------CGGGTTGATAAAT.........................................................................................................................................................................................................2311.001000010
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGTC.........................................................................................................................................................2111.001000010
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAT........................................................................................................................................................2411.001000010
...................................................................................................................................................CTTAGTACT------CGGGTTGATAATT.........................................................................................................................................................................................................2211.001000010
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGC........................................................................................................................................................................................................2211.001000010
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATTT..........................................................................................................................................................2211.001000010
...........................................................................................................................................................................................................GTCATCGGGGGTATTATG...........................................................................................................................................................1811.001100000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAT.........................................................................................................................................................................................................2211.001000010
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGATT........................................................................................................................................................2311.001000010
.....................................................................................................................................................TAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTA.............................................................................................................................................................1911.001000010
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATT...........................................................................................................................................................1911.001000010
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGG..........................................................................................................................................................2111.001000010
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATT...........................................................................................................................................................2011.001000010
....................................................................................................................................................TTAGTACT------CGGGTTGATTT...........................................................................................................................................................................................................1930.672000011
droBip1
GGCACGGCTAACTG---GTGG-AAAATTGTGGCCAA-----CAATG--------------------------T----CG--GCCAG---GGTAAAGTTAAATTTAT---TTCAA-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGAGCTATCC---T----GGAGCTGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAACACACCACAACGCATCGGCCAA-------------------------------------------TCGATCCCACTAATCAATAT----------AC-------------------GAGTTTTGTGCCAGATTCTGAGTSizeHit CountTotal NormTotal
No Reads
dp5
AATCTTCGGTACTC-----------GTAGTGAAAAATGTGT------------------------------------TC-------------AAAGTGAAATTGGT---TTTCGTTTACGTTTT-TTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCG---TAGTGTGAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACA--CAAAAA-----------------------------------------------------------ATATACACGTAAATGTGTGTGGGTGTGCGTGTGTGCGGGTGTGTGCTATATTCTGAGTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGA........................................................................................................................................................................................................2216432.006432337020176223573612
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAG.........................................................................................................................................................................................................2114746.00474613201214385043101
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCA.........................................................................................................................................................2212699.002699162804024456321680
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGC..........................................................................................................................................................2112545.00254511704031316021724
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATG...........................................................................................................................................................2012240.00224001101017353218560
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGT..........................................................................................................................................................211797.007970300036207290
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAA........................................................................................................................................................231740.007401101045406790
....................................................................................................................................................TTAGTACT------TGGGTTGATAAA..........................................................................................................................................................................................................201477.00477118020310203510
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAAG.........................................................................................................................................................................................................221387.003870510021403650
....................................................................................................................................................TTAGTACT------TGGGTTGATAA...........................................................................................................................................................................................................191142.001421500011301220
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAT........................................................................................................................................................231110.00110010001110970
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAA.......................................................................................................................................................................................................23183.0083000000100730
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGC..........................................................................................................................................................22172.007200000060660
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATG...........................................................................................................................................................21171.007100000170630
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGT........................................................................................................................................................................................................22165.0065050001280310
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTAT............................................................................................................................................................19151.005111000040450
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCA.........................................................................................................................................................23150.005001000050440
...................................................................................................................................................CTTAGTACT------TGGGTTGATAA...........................................................................................................................................................................................................20149.0049010002110350
.....................................................................................................................................................TAGTACT------TGGGTTGATAAAGA........................................................................................................................................................................................................21147.004704000040390
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGT..........................................................................................................................................................22145.004500000020430
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCT.........................................................................................................................................................22145.0045010001160270
....................................................................................................................................................TTAGTACT------TGGGTTGATA............................................................................................................................................................................................................18127.002710000000260
.....................................................................................................................................................TAGTACT------TGGGTTGATAAAG.........................................................................................................................................................................................................20126.002603000000230
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTT.........................................................................................................................................................22125.002500000030220
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAA..........................................................................................................................................................................................................21124.002401000030200
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAT.......................................................................................................................................................................................................23124.002400000050190
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATT...........................................................................................................................................................20120.002000000020180
...................................................................................................................................................CTTAGTACT------TGGGTTGATA............................................................................................................................................................................................................19119.001911000060110
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATG...........................................................................................................................................................19119.001900000010180
...................................................................................................................................................CTTAGTACT------TGGGTTGATT............................................................................................................................................................................................................19116.001611000010130
....................................................................................................................................................TTAGTACT------TGGGTTGATT............................................................................................................................................................................................................18115.001500000000150
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGC..........................................................................................................................................................20114.001401000020110
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAA.........................................................................................................................................................................................................21112.00120000003090
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTA.............................................................................................................................................................18112.001220000000100
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAA......................................................................................................................................................................................................24112.001200000010110
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGA..........................................................................................................................................................21111.001100000010100
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGCA.........................................................................................................................................................21111.00110200013050
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAAA.......................................................................................................................................................24110.001000000000100
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATTT..........................................................................................................................................................21110.00100000002080
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGTT.......................................................................................................................................................................................................23110.00100100004050
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAAGA........................................................................................................................................................................................................23110.001000000000100
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAAGT........................................................................................................................................................................................................2319.0090000006030
.....................................................................................................................................................TAGTACT------TGGGTTGATAAAGAC.......................................................................................................................................................................................................2218.0081100001050
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTTT........................................................................................................................................................2317.0070000000070
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCATT.......................................................................................................................................................2417.0070000001060
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAT.........................................................................................................................................................................................................2116.0060000002040
...................................................................................................................................................CTTAGTACT------TGGGTTGATTT...........................................................................................................................................................................................................2015.0050000002030
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAG........................................................................................................................................................2315.0050000000050
..................................................................................................................................................TCTTAGTACT------TGGGTTGATA............................................................................................................................................................................................................2015.0050000000050
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGCAA........................................................................................................................................................2215.0050000001040
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCATTT......................................................................................................................................................2515.0050000000050
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTAT............................................................................................................................................................2015.0050000001040
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATA...........................................................................................................................................................2014.0040000000040
......................................................................................................................................................AGTACT------TGGGTTGATAAAGA........................................................................................................................................................................................................2014.0040000001030
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAAT.......................................................................................................................................................2414.0040000000040
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAATT......................................................................................................................................................2514.0040000000040
......................................................................................................................................................AGTACT------TGGGTTGATAAAG.........................................................................................................................................................................................................1914.0040000000040
....................................................................................................................................................TTAGTACT------TGGGTTGATTT...........................................................................................................................................................................................................1923.0060000011040
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCTCA.......................................................................................................................................................2413.0030000000030
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAT......................................................................................................................................................................................................2413.0030000000030
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTAA............................................................................................................................................................2013.0030000000030
.....................................................................................................................................................TAGTACT------TGGGTTGATAAA..........................................................................................................................................................................................................1913.0030100000020
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTA.............................................................................................................................................................1913.0030000000030
....................................................................................................................................................TTAGTACT------TGGGTTGATAAT..........................................................................................................................................................................................................2013.0030000002010
.....................................................................................................................................................TAGTACT------TGGGTTGATAAAGACT......................................................................................................................................................................................................2313.0030000001020
....................................................................................................................................................TTAGTACT------TGGGTTGATAAG..........................................................................................................................................................................................................2013.0030000000030
.....................................................................................................................................................TAGTACT------TGGGTTGATAA...........................................................................................................................................................................................................1813.0030000000030
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGT..........................................................................................................................................................2013.0030000001020
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGCAT........................................................................................................................................................2212.0020000001010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATT..............................................................................................................................................................1712.0020000000020
..................................................................................................................................................TCTTAGTACT------TGGGTTGATAA...........................................................................................................................................................................................................2112.0020000001010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAAGC......................................................................................................................................................2512.0020000000020
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAG.......................................................................................................................................................................................................2312.0020000001010
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGTAA......................................................................................................................................................................................................2412.0020000000020
....................................................................................................................................................TTAGTACT------TGGGTTGATATT..........................................................................................................................................................................................................2012.0020100000010
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAC.........................................................................................................................................................................................................2112.0020001001000
...................................................................................................................................................CTTAGTACT------TGGGTTGATTTT..........................................................................................................................................................................................................2121.5030000001020
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCT.........................................................................................................................................................2311.0010000001000
.........................................................................................................................................................ACT------TGGGTTGATAAAG.........................................................................................................................................................................................................1611.0010000000010
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAT..........................................................................................................................................................................................................2111.0010000001000
....................................................................................................................................................TTAGTACT------TGGGTTGATAAATT........................................................................................................................................................................................................2211.0010000000010
.............................................................................................................................TTTTTTGTTTTGGTTCTATGTT.....................................................................................................................................................................................................................................2211.0010000000010
....................................................................................................................................................TTAGTACT------TGGGTTGATAT...........................................................................................................................................................................................................1911.0010000000010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGG..........................................................................................................................................................2111.0010000000010
...................................................................................................................................................CTTAGTACT------TGGGTTGAT.............................................................................................................................................................................................................1811.0010000000010
....................................................................................................................................................TTAGTACT------TGGGTTGATG............................................................................................................................................................................................................1811.0010000000010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATAT..........................................................................................................................................................2111.0010000000010
....................................................................................................................................................TTAGTACT------TGGGTTGATAAGTG........................................................................................................................................................................................................2211.0010000000010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAATC......................................................................................................................................................2511.0010000000010
........................................................................................................................TTTT-TTTTTTGTTTTGGTTCTATGTT.....................................................................................................................................................................................................................................2611.0010000000010
....................................................................................................................................................TTAGTACT------TGGGTTGATAATT.........................................................................................................................................................................................................2111.0010000000010
.......................................................................................................................................................................................................CTTTGTCATCGCGGGTATTATG...........................................................................................................................................................2211.0010000001000
..................................................................................................................................................TCTTAGTACT------TGGGTTGATAAA..........................................................................................................................................................................................................2211.0010000000010
........................................................................................................................................................................................................TTTGTCATCGCGGGTATT..............................................................................................................................................................1811.0010000000010
.........................................................................................................................................................ACT------TGGGTTGATAAAGA........................................................................................................................................................................................................1711.0010000000010
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAAT.........................................................................................................................................................................................................2211.0010000001000
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGG........................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................CTTAGTACT------TGGGTTGATAT...........................................................................................................................................................................................................2011.0010000000010
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAAGTT.......................................................................................................................................................................................................2411.0010000001000
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGACC......................................................................................................................................................................................................2411.0010001000000
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGTGT......................................................................................................................................................................................................2411.0010000000010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCACT.......................................................................................................................................................2411.0010000000010
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGC........................................................................................................................................................................................................2211.0010000001000
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTC.........................................................................................................................................................2211.0010000000010
........................................................................................................................................................................................................TTTGTCATCGCGGGT.................................................................................................................................................................1511.0010000000010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCTT........................................................................................................................................................2311.0010000000010
........................................................................................................................................................TACT------TGGGTTGATAAAG.........................................................................................................................................................................................................1711.0010000000010
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCG.........................................................................................................................................................2211.0010000000010
....................................................................................................................................................TTAGTACT------TGGGTTGATAAGA.........................................................................................................................................................................................................2111.0010000000010
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGTTT........................................................................................................................................................2411.0010000000010
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGA..........................................................................................................................................................2211.0010000000010
...........................................................................................................................................................................................................GTCATCGCGGGTATTATGCA.........................................................................................................................................................2011.0010000001000
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCAA........................................................................................................................................................2411.0010000000010
droPer2
AATCTTCGGTACTC-----------GTAGTGAAAAATGTGT------------------------------------TC-------------AAAGTGAAATTGGT---TTTCGTTCACGTTTTTTTTTTTGTTTTGGTTCTATGTTCTTAGTACT------TGGGTTGATAAAGACCACTCG---TAGTGTGAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACA--CAAAAA-----------------------------------------------------------ATATACACGTAAATGTGTGTGGGTGT--------GCGGGTGTGTTCTATATTCTGAGTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGA........................................................................................................................................................................................................2211715.001715020301710
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAG.........................................................................................................................................................................................................2111028.001028030001025
....................................................................................................................................................TTAGTACT------TGGGTTGATAAA..........................................................................................................................................................................................................201305.0030501011302
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATG...........................................................................................................................................................201194.0019403040187
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGC..........................................................................................................................................................211155.0015505041145
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCA.........................................................................................................................................................221130.0013014022121
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGT........................................................................................................................................................................................................221119.0011900000119
....................................................................................................................................................TTAGTACT------TGGGTTGATAA...........................................................................................................................................................................................................191100.0010000000100
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGT..........................................................................................................................................................21154.00540100053
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAT.......................................................................................................................................................................................................23132.00320000032
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAA.......................................................................................................................................................................................................23121.00210000021
...................................................................................................................................................CTTAGTACT------TGGGTTGATT............................................................................................................................................................................................................19117.00170000017
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGTT.......................................................................................................................................................................................................23112.00120000012
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAAG.........................................................................................................................................................................................................22112.00120000012
...................................................................................................................................................CTTAGTACT------TGGGTTGATAA...........................................................................................................................................................................................................20111.00110000011
...................................................................................................................................................CTTAGTACT------TGGGTTGATA............................................................................................................................................................................................................19111.00110000011
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAA........................................................................................................................................................2319.009010107
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAT.........................................................................................................................................................................................................2118.008000008
...................................................................................................................................................CTTAGTACT------TGGGTTGATTT...........................................................................................................................................................................................................2018.008000107
....................................................................................................................................................TTAGTACT------TGGGTTGATTT...........................................................................................................................................................................................................1938.00240000024
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAA.........................................................................................................................................................................................................2118.008000008
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGT..........................................................................................................................................................2216.006000006
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATG...........................................................................................................................................................2116.006000006
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCT.........................................................................................................................................................2215.005000005
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAAGT........................................................................................................................................................................................................2315.005000005
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGCAT........................................................................................................................................................2314.004000004
....................................................................................................................................................TTAGTACT------TGGGTTGATA............................................................................................................................................................................................................1814.004000013
....................................................................................................................................................TTAGTACT------TGGGTTGATAAT..........................................................................................................................................................................................................2014.004000004
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTAT............................................................................................................................................................1913.003000003
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGA..........................................................................................................................................................2113.003000003
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGATT......................................................................................................................................................................................................2413.003000003
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAA..........................................................................................................................................................................................................2112.002000002
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTAT............................................................................................................................................................2012.002000002
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGCA.........................................................................................................................................................2312.002000002
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTATGC..........................................................................................................................................................2212.002000002
...................................................................................................................................................CTTAGTACT------TGGGTTGATAAT..........................................................................................................................................................................................................2112.002000002
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGC........................................................................................................................................................................................................2212.002000002
....................................................................................................................................................TTAGTACT------TGGGTTGATAAG..........................................................................................................................................................................................................2012.002000002
....................................................................................................................................................TTAGTACT------TGGGTTGATAT...........................................................................................................................................................................................................1912.002000002
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAT......................................................................................................................................................................................................2412.002000002
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAG.......................................................................................................................................................................................................2312.002000002
...............................................................................................................................................................................ACCACTCG---TAGTGTGAGAAGCCT...............................................................................................................................................................................2311.001000001
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATAT..........................................................................................................................................................2111.001000001
..................................................................................................................................................TCTTAGTACT------TGGGTTGATA............................................................................................................................................................................................................2011.001000001
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGG........................................................................................................................................................................................................2211.001000001
........................................................................................................................................................................................................TTTGTCATCGCGGGTATTA.............................................................................................................................................................1911.001000001
....................................................................................................................................................TTAGTACT------TGGGTTGATT............................................................................................................................................................................................................1811.001000001
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAC.........................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATG...........................................................................................................................................................1911.001010000
....................................................................................................................................................TTAGTACT------TGGGTTGATAAAGAAA......................................................................................................................................................................................................2411.001000001
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGCT.........................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................TTGTCATCGCGGGTATTATGTT.........................................................................................................................................................2211.001000001
....................................................................................................................................................TTAGTACT------TGGGTTGATAAATT........................................................................................................................................................................................................2211.001000001
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGCA.........................................................................................................................................................2111.001010000
....................................................................................................................................................TTAGTACT------TGGGTTGATAAGA.........................................................................................................................................................................................................2111.001000001
....................................................................................................................................................TTAGTACT------TGGGTTGATAATT.........................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGT..........................................................................................................................................................2011.001000001
.....................................................................................................................................................TAGTACT------TGGGTTGATAAAGACT......................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................................................TGTCATCGCGGGTATTATGCAA........................................................................................................................................................2211.001000001
.....................................................................................................................................................TAGTACT------TGGGTTGATAAAGA........................................................................................................................................................................................................2111.001000001
...................................................................................................................................................CTTAGTACT------TGGGTTGATTTT..........................................................................................................................................................................................................2130.672000002
droWil2
AATGTGCAAAAACA---GTT------TAGTG-----------------------------------------------------------------AAAAAGTGAC---TTAAG-------------------TTTTGTTCTATATTCTTAGTACT------CGGGTTGATAAAGACAAAATGTTTA----CCAATCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAGTTCAACATAATAAT--TAAGAA--------TTAACTTTGAATTGGAAACGATATTGAAATG---------------------------------------------------------AATTTATGCTAAATTCTGAGTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................227156.5710964489315459
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................21796.14673445853446
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGA..........................................................................................................................................................21746.143231372691420
....................................................................................................................................................TTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................20729.00203362148413
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGA..........................................................................................................................................................2277.8655024337
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGA..........................................................................................................................................................2077.8655204922
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATG...........................................................................................................................................................2077.2951034521
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................2275.5739003432
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAA.........................................................................................................................................................2275.29371222210
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAA.......................................................................................................................................................................................................2375.1436203112
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAA........................................................................................................................................................2375.00351202120
....................................................................................................................................................TTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................1974.71331011822
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAA.........................................................................................................................................................................................................2173.5725401425
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTAT............................................................................................................................................................2072.4317120500
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................2372.2916011401
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATG...........................................................................................................................................................2171.7112001020
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAA.........................................................................................................................................................2371.571130521
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAA..........................................................................................................................................................................................................2171.5711001100
...................................................................................................................................................CTTAGTACT------CGGGTTGATAA...........................................................................................................................................................................................................2071.431010900
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAT............................................................................................................................................................1971.431090100
...................................................................................................................................................CTTAGTACT------CGGGTTGATA............................................................................................................................................................................................................1971.00700412
....................................................................................................................................................TTAGTACT------CGGGTTGATA............................................................................................................................................................................................................1870.86650010
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATC...........................................................................................................................................................2170.71520111
....................................................................................................................................................TTAGTACT------CGGGTTGATC............................................................................................................................................................................................................1870.71540001
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTA.............................................................................................................................................................1870.71550000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATG...........................................................................................................................................................1970.57430100
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................2170.57400301
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAA........................................................................................................................................................2470.57412100
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................2270.57400400
....................................................................................................................................................TTAGTACT------CGGGTTGATAAGA.........................................................................................................................................................................................................2170.43300201
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGT..........................................................................................................................................................2170.43301200
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAA.........................................................................................................................................................2170.43300300
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................2470.43330000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGG........................................................................................................................................................................................................2270.43320100
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAGAA.......................................................................................................................................................................................................2270.43302100
....................................................................................................................................................TTAGTACT------CGGGTTGATAAG..........................................................................................................................................................................................................2070.43300300
....................................................................................................................................................TTAGTACT------CGGGTTGATCC...........................................................................................................................................................................................................1980.38300003
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAA........................................................................................................................................................2270.29200200
...................................................................................................................................................CTTAGTACT------CGGGTTGATC............................................................................................................................................................................................................1970.29200101
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATC...........................................................................................................................................................2070.29210001
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGC........................................................................................................................................................................................................2270.29200011
....................................................................................................................................................TTAGTACT------CGGGTTGATT............................................................................................................................................................................................................1870.29210001
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAT.......................................................................................................................................................................................................2370.29200200
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAC.......................................................................................................................................................................................................2370.29210010
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATCCC.........................................................................................................................................................2370.29200002
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAG........................................................................................................................................................2270.29200200
....................................................................................................................................................TTAGTACT------CGGGTTGATAT...........................................................................................................................................................................................................1990.22200101
................................................................................................................................................ATTCTTAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................2550.20101000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAC.........................................................................................................................................................2270.14110000
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAGAG.......................................................................................................................................................................................................2370.14100100
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGG..........................................................................................................................................................2270.14110000
.......................................................................................................................................................GTACT------CGGGTTGATAAAGACAAAAT..................................................................................................................................................................................................2570.14101000
...........................................................................................................................................................................................................GTCATCGGGGGTATTATGA..........................................................................................................................................................1970.14100100
....................................................................................................................................................TTAGTACT------CGGGTTGATAAAT.........................................................................................................................................................................................................2170.14100010
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATGAAAA.......................................................................................................................................................2570.14110000
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAAATATAGC..................................................................................................................................................2870.14101000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATT..............................................................................................................................................................1870.14110000
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATGAAC........................................................................................................................................................2370.14110000
........................................................................................................................................................................................................TTTGTCATCGGGGGTATTATA...........................................................................................................................................................2170.14100010
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGAT.........................................................................................................................................................2170.14100100
...................................................................................................................................................CTTAGTACT------CGGGTTGATAAAGT........................................................................................................................................................................................................2370.14100100
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGG..........................................................................................................................................................2070.14110000
...................................................................................................................................................CTTAGTACT------CGGGTTGATT............................................................................................................................................................................................................1970.14110000
....................................................................................................................................................TTAGTACT------CGGGTTGATG............................................................................................................................................................................................................1870.14100001
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAA.........................................................................................................................................................................................................2070.14110000
........................................................................................................................................................TACT------CGGGTTGATAAAGACAAAATGTT...............................................................................................................................................................................................2770.14101000
.....................................................................................................................................................TAGTACT------CGGGTTGATAAAG.........................................................................................................................................................................................................2070.14100100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTC.............................................................................................................................................................1870.14101000
...................................................................................................................................................CTTAGTACT------CGGGTTGATAATA.........................................................................................................................................................................................................2270.14100100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTAA............................................................................................................................................................1970.14100100
..................................................................................................................................................TCTTAGTACT------CGGGTTGATAAAGA........................................................................................................................................................................................................2470.14100100
........................................................................................................................................................TACT------CGGGTTGATAAAGA........................................................................................................................................................................................................1870.14100001
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATCC..........................................................................................................................................................2170.14100100
..........................................................................................................................................................................................................TGTCATCGGGGGTATTATGC..........................................................................................................................................................2070.14100100
.........................................................................................................................................................................................................TTGTCATCGGGGGTATTATT...........................................................................................................................................................2070.14101000
....................................................................................................................................................TTAGTACT------CGGGTTGATTTC..........................................................................................................................................................................................................20200.10200101
droVir3
AATGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
No Reads
droMoj3
AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
No Reads
droGri2
AATGTGTAAAAC-G---GTAA-GGAGTGATGCATGTAATGG---CAAAAATACCTCAAAGAGTAG------------CA--------------GGAGTAGTTAAGTTGTAGTTTCTTACGGTTTTTTTTTTAATAACATGC------TTTAGTGCTTCAATGTAGGTGGCTCAAGATATTTGT--------TGATTGGC----------------------------------------------------------------------------------------------------------------------------------------------------------CTTGGTTATGCTAAATTCCAAGTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 11:24 PM