ID:

dsi-mir-6-2

 Coordinate:

2r:16195646-16195719 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.6

Flybase annnotation

utr3 [utr3_minus_3614]

No Repeatable elements found

mature

  1. dsi-mir-6-3  2r:16195499-16195520 -
  2. dsi-mir-6-2  2r:16195651-16195672 -
  3. dsi-mir-6-1  2r:16195791-16195812 -
star

Sense Strand Reads

CATTATTTAATTTACTTTTTTTTTTCGCACACGAATAACCATGCCGTTTTTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGAAAAACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAATTCCAACGATTTGTCATTTGTGGCACGCATTTGTGTCACCT

******************************************(((((...(((((..(((((((..((((((.(((((((...............)))))))))))))..)))))))..))))).)))))....**************************************** 		Read size # Mismatch Hit Count Total Norm Total M025

embryo

 SRR553488

RT_0-2 hours eggs

 SRR553487

NRT_0-2 hours eggs

 SRR553485

Chicharo_3 day-old ovaries

 M053

female body

 SRR553486

Makindu_3 day-old ovaries

 O002

Head

 GSM343915

embryo

 O001

Testis

 M023

head

 M024

male body		 SRR618934

dsim w501 ovaries

 SRR902009

testis

 SRR1275483

Male prepupae		 SRR902008

ovaries

 SRR1275487

Male larvae
.................................................................................................TATCACAGTGGCTGGTCTTTTT....................................................... 22 1 3 2906.00 8718 6686 1108 897 0 1 0 0 7 0 11 7 0 0 0 0 1
.................................................................................................TATCACAGTGGCTGGTTTTTTT....................................................... 22 2 3 2273.33 6820 4040 1507 1250 0 0 0 0 3 0 11 9 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTT........................................................ 21 1 3 1032.33 3097 2650 228 197 0 0 0 0 5 0 5 11 0 0 1 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTT....................................................... 22 0 3 816.00 2448 79 60 53 825 797 375 222 3 27 0 0 1 5 0 1 0
.................................................................................................TATCACAGTGGCTGGTTTTTT........................................................ 21 2 3 445.33 1336 985 175 172 0 0 0 0 0 0 0 4 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATATA.............................................................................................. 23 0 1 289.00 289 33 97 115 7 0 0 0 37 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTTTTT....................................................... 22 2 3 198.00 594 384 123 77 0 0 0 0 9 0 0 1 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATAT............................................................................................... 22 0 1 186.00 186 32 44 86 1 1 0 1 21 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTT........................................................ 21 0 3 162.67 488 81 15 12 124 119 73 45 1 9 1 0 4 4 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTT......................................................... 20 1 3 150.67 452 334 45 63 0 0 0 0 1 0 6 2 0 0 1 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTTTG...................................................... 23 1 2 127.50 255 132 58 65 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTTTTTG...................................................... 23 2 2 70.50 141 104 13 24 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTG...................................................... 23 0 2 66.00 132 8 5 7 40 51 18 2 0 0 0 0 1 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTT.......................................................... 19 0 3 61.33 184 2 4 6 6 1 2 135 0 27 0 0 1 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTT......................................................... 20 0 3 50.67 152 33 5 9 16 12 14 57 0 3 0 0 2 1 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTA...................................................... 23 1 3 50.67 152 0 0 0 90 1 61 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATA................................................................................................ 21 0 1 49.00 49 15 11 16 0 0 1 0 6 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTAA..................................................... 24 2 3 43.33 130 0 0 0 78 0 52 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCT........................................................... 18 0 3 39.00 117 0 0 0 1 0 4 105 0 6 0 0 1 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTCTTTTT....................................................... 22 1 3 38.67 116 7 48 60 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTTT......................................................... 20 2 3 37.00 111 89 9 9 0 0 0 0 3 0 1 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGCTTTTT....................................................... 22 2 3 29.33 88 76 5 3 0 0 0 0 3 0 1 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTCTTTTTG...................................................... 23 1 2 28.50 57 54 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGTTTTTT....................................................... 22 3 4 26.00 104 84 8 3 0 0 0 0 9 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTTGCTGTTCTTTTT....................................................... 22 1 3 24.67 74 4 27 41 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTTTT........................................................ 21 2 3 24.67 74 46 14 11 0 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGTTGTTCTTTTT....................................................... 22 1 3 24.00 72 6 38 27 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGTCTGTTCTTTTT....................................................... 22 1 3 22.33 67 0 31 36 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGACTGTTCTTTTT....................................................... 22 1 3 22.00 66 7 25 20 1 0 1 0 12 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGCCTGTTCTTTTT....................................................... 22 1 3 21.00 63 1 31 29 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTAGCTGTTCTTTTT....................................................... 22 1 3 19.67 59 7 18 21 0 0 0 0 13 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTTTTTTT....................................................... 22 1 3 19.00 57 13 19 17 5 0 3 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTGGCTGTTCTTTTT....................................................... 15 0 3 18.67 56 0 28 27 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................ATCACAGTGGCTGTTCTTTTT....................................................... 21 0 3 18.33 55 0 0 0 0 55 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTATTTTT....................................................... 22 2 3 15.00 45 30 1 5 0 0 0 0 9 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGT.............................................................. 15 0 3 15.00 45 0 30 12 0 0 0 0 0 0 0 0 2 0 0 1 0
.................................................................................................TATCACAGTGGCTGTTCTTTTAA...................................................... 23 2 3 13.33 40 0 0 0 21 0 19 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTAAA..................................................... 24 3 3 12.67 38 0 0 0 21 0 17 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACGGTGGCTGTTCTTTTT....................................................... 22 1 3 11.67 35 5 14 9 0 1 0 0 6 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTCGCTGTTCTTTTT....................................................... 22 1 3 11.67 35 1 15 18 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACATTGGCTGGTCTTTTT....................................................... 22 2 3 11.33 34 32 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCGTTCTTTTT....................................................... 22 1 3 10.67 32 11 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTATTCTTTTT....................................................... 22 1 3 10.33 31 0 16 15 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTTTTTT........................................................ 21 1 3 9.67 29 19 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGGTGTTCTTTTT....................................................... 22 1 3 9.00 27 1 15 11 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTTGCTGTTCTTTT........................................................ 21 1 3 8.00 24 2 9 6 3 0 3 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTTTA...................................................... 23 2 3 8.00 24 4 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CACAGTTGCTGTTCTTTTAGAT.................................................... 22 3 3 8.00 24 0 1 0 16 0 7 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGACTGTTCTTTTTG...................................................... 23 1 2 8.00 16 9 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGAT................................................................................................. 20 0 1 8.00 8 1 2 3 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTT.......................................................... 19 1 3 7.67 23 15 4 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTA....................................................... 22 1 3 7.33 22 0 0 1 12 0 8 0 0 0 0 0 1 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATATAA............................................................................................. 24 1 1 7.00 7 1 2 3 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTGGCTGGTCTTTTT....................................................... 21 1 3 6.00 18 16 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCGTTCTTTTTG...................................................... 23 1 2 5.50 11 10 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGGTTTTT....................................................... 22 3 5 5.40 27 7 1 1 0 0 0 0 18 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTCCTTTTT....................................................... 22 1 3 5.33 16 3 10 2 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGTCTGTTCTTTT........................................................ 21 1 3 5.33 16 2 6 7 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGCCTTTTT....................................................... 22 2 3 5.33 16 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACATTGGCTGTTCTTTTT....................................................... 22 1 3 5.00 15 13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTCTTTT........................................................ 21 1 3 4.67 14 2 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTCTTCTTTTT....................................................... 22 1 3 4.67 14 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGCGGCTGGTCTTTTT....................................................... 22 2 3 4.33 13 12 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACATTGGCTGTTCTTTTTG...................................................... 23 1 2 4.00 8 2 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGACTGTTCTTTT........................................................ 21 1 3 4.00 12 4 4 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCGTTCTTTT........................................................ 21 1 3 3.67 11 5 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTTTTT......................................................... 20 1 3 3.67 11 8 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTGTTTTT....................................................... 22 1 3 3.67 11 5 2 3 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGCCTGTTCTTTT........................................................ 21 1 3 3.33 10 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGGGGCTGTTCTTTTT....................................................... 22 1 3 3.33 10 0 4 2 2 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGTTGTTCTTTT........................................................ 21 1 3 3.33 10 2 1 6 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCGCAGTGGCTGGTCTTTTT....................................................... 22 2 3 3.00 9 7 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGATTTTT....................................................... 22 3 3 3.00 9 4 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCGGTCTTTTT....................................................... 22 2 3 3.00 9 2 0 1 0 0 0 0 6 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTCTTCTTTTTG...................................................... 23 1 2 3.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTAGCTGTTCTTTT........................................................ 21 1 3 2.67 8 2 2 3 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTT............................................................. 16 0 3 2.67 8 0 5 0 1 0 0 0 0 0 0 0 2 0 0 0 0
..................................................................................................ATCACAGTGGCTGTTCTTTT........................................................ 20 0 3 2.67 8 0 0 0 0 5 0 0 0 3 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGTTGTTCTTTTTG...................................................... 23 1 2 2.50 5 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACGGTGGCTGTTCTTTTTG...................................................... 23 1 2 2.50 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTGGCTGTTCTTTTTG...................................................... 22 0 2 2.50 5 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACATTGGCTGTTCTTTT........................................................ 21 1 3 2.33 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTGT....................................................... 22 1 3 2.33 7 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTCCTTTT........................................................ 21 1 3 2.33 7 1 2 3 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTATTTTT....................................................... 22 1 3 2.33 7 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCTTTCTTTTT....................................................... 22 2 3 2.33 7 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACGGTGGCTGTTCTTTT........................................................ 21 1 3 2.33 7 1 1 0 0 0 0 0 5 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGCGGCTGTTCTTTTT....................................................... 22 1 3 2.33 7 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTGGCTGGTCTTTT........................................................ 20 1 3 2.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGGTTTT....................................................... 22 3 5 2.00 10 4 0 1 0 0 0 0 5 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTTTGG..................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTTTTTTT....................................................... 22 2 3 2.00 6 1 1 3 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACCGTGGCTGTTCTTTTT....................................................... 22 1 3 2.00 6 0 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTTT......................................................... 20 2 4 2.00 8 6 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACACTGGCTGTTCTTTT........................................................ 21 1 3 2.00 6 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TACCACAGTGGCTGGTCTTTTT....................................................... 22 2 3 2.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACACTGGCTGGTCTTTTT....................................................... 22 2 3 2.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAGCTTCTGCTGCTGATATA.............................................................................................. 23 1 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTTTTTG...................................................... 23 2 2 2.00 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGCTCTTTTT....................................................... 22 1 3 2.00 6 1 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCT........................................................... 18 1 4 2.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTATTGAAAAACTCCTA............................................................................. 17 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTATTTT........................................................ 21 2 3 2.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTGGCTGGTTTTTTT....................................................... 21 2 3 2.00 6 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TAGGGAACTTCTGCTGCTGATAT............................................................................................... 23 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGGACTTCTGCTGCTGATATA.............................................................................................. 23 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTCCTTTTTG...................................................... 23 1 2 2.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATATAAA............................................................................................ 25 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCACAGTTGCTGTTCTTTTAGA..................................................... 22 3 4 2.00 8 0 0 0 3 0 5 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTTTTTGG..................................................... 24 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTTTTTTTG...................................................... 23 1 2 2.00 4 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGCTTTT........................................................ 21 2 4 1.75 7 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTTTTTA...................................................... 23 3 4 1.75 7 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACACTGGCTGTTCTTTTT....................................................... 22 1 3 1.67 5 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CATCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.67 5 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGAGGCTGTTCTTTTT....................................................... 22 1 3 1.67 5 0 2 0 0 2 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCACAGTGGCTGGTCTTTTT....................................................... 20 1 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAATGGCTGGTCTTTTT....................................................... 22 2 3 1.67 5 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTCGCTGTTCTTTT........................................................ 21 1 3 1.67 5 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTCGCTGTTCTTTTTG...................................................... 23 1 2 1.50 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGCCTGTTCTTTTTG...................................................... 23 1 2 1.50 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTATTTTTG...................................................... 23 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGATGTTCTTTTTG...................................................... 23 1 2 1.50 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTTGCTGTTCTTTTTG...................................................... 23 1 2 1.50 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGTTTTTTG...................................................... 23 3 2 1.50 3 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTCTTTTT.......................................................... 19 2 4 1.50 6 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTATTCTTTT........................................................ 21 1 3 1.33 4 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTA........................................................ 21 1 3 1.33 4 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACATTGGCTGGTTTTTTT....................................................... 22 3 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GATCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.33 4 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTCCTTTTT......................................................... 20 3 12 1.33 16 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCACAGTGGCTGTTCTTTTT....................................................... 20 0 3 1.33 4 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTCTTTTT........................................................ 21 2 3 1.33 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AATCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.33 4 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCGCAGTGGCTGGTCTTTT........................................................ 21 2 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATTACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.33 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGGTTTT........................................................ 21 3 8 1.13 9 0 0 1 0 0 0 0 8 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGATGTTCTTTTT....................................................... 22 1 3 1.00 3 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTGTT.................................................... 25 1 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCGTTTCTTTTT....................................................... 22 2 4 1.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTATCACAGTGGCTGGTTTTTTT....................................................... 23 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCGCAGTGGCTGGTTTTTTT....................................................... 22 3 7 1.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TACCACAGTGGCTGGTCTTTT........................................................ 21 2 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTTTGCTGCTGATATA.............................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTAGCTGTTCTTTTTG...................................................... 23 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTATCACAGTGGCTGGTCTTTTT....................................................... 23 2 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCCTTTT....................................................... 22 2 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTGTTTT........................................................ 21 1 3 1.00 3 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTTTTTGGGT................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................AGGGTACTTCTGCTGCTGATA................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTATTTTTTTT....................................................... 22 2 3 1.00 3 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATAACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACGGTGGCTGTTCTTT......................................................... 20 1 3 1.00 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGCCTGTTCTTT......................................................... 20 1 3 1.00 3 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTTTTTC...................................................... 23 3 3 1.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGAGGCTGGTCTTTTT....................................................... 22 2 3 1.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAATGGCTGTTCTTTT........................................................ 21 1 3 1.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTTGCTGTTCTTT......................................................... 20 1 3 1.00 3 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTGA..................................................... 24 1 2 1.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................AGCGAACTTCTGCTGCTGATA................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGTCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.00 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGTTGCTGA.................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGGACTTCTGCTGCTGATAT............................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGCTCTTTT........................................................ 21 1 3 1.00 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGACATA.............................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGGTGTTCTTTTTG...................................................... 23 1 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGTTTTT........................................................ 21 3 8 1.00 8 6 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................ACGGAACTTCTGCTGCTGATA................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTCT....................................................... 22 2 3 1.00 3 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATATAC............................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGTCTGTTCTTT......................................................... 20 1 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGCCTGTTCTTTTTA...................................................... 23 2 3 1.00 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACGGTGGCTGGTATTTTT....................................................... 22 3 3 1.00 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTTCTGATA................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATATATTAT.......................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGATGCTGATATA.............................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCGTTTTTTTTG...................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................AACCATGCCGTTTTTAACCCA..................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ACAGTGGCTGGTCTTTTT....................................................... 18 1 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAAATTCTGCTGCTGATATA.............................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACATTGGCTGGTCTTTT........................................................ 21 2 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTATTCTTTTTG...................................................... 23 1 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGCACTTCCGCTGCTGATAT............................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCCGATAT............................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATAA............................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTTTTTTTG...................................................... 23 2 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACATTGGCTGTTCTTT......................................................... 20 1 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GGAACTTCTGCTGCTGATATA.............................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTGGCTGTTCTTTTTG...................................................... 16 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATATAT............................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTGGC.................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGA.................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGG.................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CAGGGAACTTCTGCTGCTGATAT............................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGACTTTTT....................................................... 22 2 3 1.00 3 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................AGGGAACTTCTGCTGCTGATATATT............................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTGT........................................................ 21 2 3 1.00 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTT.......................................................... 19 2 4 0.75 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTGTTT....................................................... 22 3 4 0.75 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................................................TAGCACAGTGGCTGGTATTTTT....................................................... 22 3 4 0.75 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGATTTT....................................................... 22 3 4 0.75 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
....................................................................................................CACAGTGGCTGGTCTTTTT....................................................... 19 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCGTTTT....................................................... 22 1 3 0.67 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTCTT....................................................... 22 2 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTATTCTTT......................................................... 20 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGACTGTTCTTTTA....................................................... 22 2 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AATCACAGTGGCTGGTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGGGGCTGGTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CATCACAGTGGCTGGTTTTTTT....................................................... 22 3 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGACTGTTCTTT......................................................... 20 1 3 0.67 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACACTGGCTGTTTTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGTCACAGTGGCTGGTCTTTTT....................................................... 22 2 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTC......................................................... 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGCGGCTGGTCTTTT........................................................ 21 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGCCTTTT........................................................ 21 2 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTATGTTT....................................................... 22 3 3 0.67 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAATGGCTGTTCTTT......................................................... 20 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGGTGGTCTTTTT....................................................... 22 2 3 0.67 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCAAAGTGGCTGTTCTTTTT....................................................... 22 1 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTCGCTGTTCTTTTTA...................................................... 23 2 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTTGCTGTTCCTTTTG...................................................... 23 2 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTGGCTGTTCTTTTTA...................................................... 22 1 3 0.67 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTCTTCTTTT........................................................ 21 1 3 0.67 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTCTTTTTA...................................................... 23 2 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGTCTGTTCTTTTTA...................................................... 23 2 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGGGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTG........................................................ 21 1 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTC......................................................... 20 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCAGTTCTTTTT....................................................... 22 1 3 0.67 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................TATCGCAGTGGCTGGTCTTT......................................................... 20 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCCCAGTGGCTGGTCTTTTT....................................................... 22 2 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCATAGTGGCTGTTCTTTTT....................................................... 22 1 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGTCGTTCTTTTT....................................................... 22 2 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACCGTGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGCGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTATTGTT....................................................... 22 3 3 0.67 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTT.......................................................... 19 2 6 0.67 4 1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTTTTC....................................................... 22 3 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCCTTT........................................................ 21 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTATCACAGTGGCTGGTCTTTT........................................................ 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATGACAGTGGCTGGTTTTTTT....................................................... 22 3 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAATGGCTGTTCTTTTT....................................................... 22 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACTGTGGCTGGTCTTTTT....................................................... 22 2 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCACAGTGGCTGGTTTTTTT....................................................... 20 2 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACGGTGGCTGGTCTTTT........................................................ 21 2 3 0.67 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................ACAGTGGCTGTTCTTTTT....................................................... 18 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTTTTTT........................................................ 21 2 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGAGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATTACAGTGGCTGGTCTTTTT....................................................... 22 2 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ACGGTGGCTGTTCTTTTT....................................................... 18 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTC....................................................... 22 1 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGT............................................................. 16 1 5 0.60 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTCTCTTTTT........................................................ 21 3 11 0.55 6 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTTTGTT.................................................... 25 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CCATATCACAGTGGCTGGTTTTTTT....................................................... 25 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCCTT......................................................... 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTTGG...................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTGATC................................................... 26 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCTTTCTTTTTG...................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGCTCTTTTTG...................................................... 23 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CCATATCACAGTGGCTGGTCTTTTT....................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCCGGTCTTTTTG...................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTTGCTGTTCTTTTAGA..................................................... 24 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTGTTTT....................................................... 22 3 6 0.50 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTAAA...................................................... 23 3 4 0.50 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGTCTGTTCTTTTTG...................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTGGCTGGTCTTTTTG...................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTCACAGTGGCTGTTCTTTTTG...................................................... 23 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACCGTGGCTGTTCTTTTTG...................................................... 23 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTGTTGTTCG..................................................... 24 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTTTGC..................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAATGGCTGGTCTTTTTG...................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTCGCTGTTCTTTTTGA..................................................... 24 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TACCACAGTGGCTGGTCTTTTTG...................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CTCATATCACAGTGGCTGGTCTTTTT....................................................... 26 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTTTGA..................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTTCTTTGTG...................................................... 23 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACACTGGCTGGTTTTTTT....................................................... 22 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATAACAGTGGCTGTTCTTTTTGA..................................................... 24 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TAGCACAGTGGCTGGTGTTTTT....................................................... 22 3 4 0.50 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTTGCTGTTTTTTTAG...................................................... 22 3 4 0.50 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................GATCACAGTGGCTGTTCTTTTTG...................................................... 23 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AAGGAACTTCAGCTGCTGGTAT............................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTTTTCTTTTTGA..................................................... 24 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCTCAGTGGCTTTTCTTTTTG...................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCCTTTTG...................................................... 23 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGGGGCTGTTCTTTTTG...................................................... 22 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTTTTTTTGTT.................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGTCCTTTTTGTT.................................................... 25 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TCACAGTTGCTGTTCTTTTAG...................................................... 21 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATCACAGTGGCGGTTCTTTTTG...................................................... 22 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGGCTTT......................................................... 20 2 4 0.50 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTTGCTTTTCTTTT........................................................ 21 2 9 0.44 4 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGTTTTG....................................................... 22 3 5 0.40 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGCTTTTT........................................................ 21 3 5 0.40 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGGGGCTGGTTTTTTT....................................................... 22 3 5 0.40 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTGCTTTT....................................................... 22 3 5 0.40 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCAGGTCTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGACTGGTCTTTTT....................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGGTGGTCTTGTT....................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TATCACAGTGGCTGGTCTTTTA....................................................... 22 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTAATAAATTAAATGAAAAAAAAAAGCGTGTGCTTATTGGTACGGCAAAAATTGGGGTCCCTTGAAGACGACGACTATATAATAACTTTTTGAGGATATAGTGTCACCGACAAGAAAAACCAACGTGCCGGTTAAGGTTGCTAAACAGTAAACACCGTGCGTAAACACAGTGGA

****************************************(((((...(((((..(((((((..((((((.(((((((...............)))))))))))))..)))))))..))))).)))))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485

Chicharo_3 day-old ovaries

 M023

head

 SRR553486

Makindu_3 day-old ovaries

 SRR618934

dsim w501 ovaries

 SRR902009

testis
..........................................................................CTATAGAATAAATTTTTTAGGAT............................................................................. 23 3 2 0.50 1 0 1 0 0 0
..............................................................................ATAATAGCTTGTTGTGGATAT........................................................................... 21 3 2 0.50 1 1 0 0 0 0
................AAAAAAAAAGCTTGTGCTTCTT........................................................................................................................................ 22 2 4 0.25 1 0 0 1 0 0
...................................................................................................................................TTAAGGTTGATAAACA........................... 16 1 19 0.05 1 1 0 0 0 0
...............TAAAAAAAAGGCTTGTGCTT........................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 1
.............CGAAAAAAAAAAGCGT................................................................................................................................................. 16 1 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 2r:16195596-16195769 - dsi-mir-6-2 Known_mirbase CATTAT-------TTAATT--TACTTT------TTT----T-TTT----------------------------------------------CG---CACACGAATAA---CCATGCCGT-------TTTTAACCCCAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------AAA----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCT
droSec2 scaffold_1:13063057-13063227 - dse-mir-6-2 Known_mirbase CATTAT-------TTAATT--TACT---------TT----T-TT----------------------------------------------TTG---CACACGAATAA---CCATGCCGT-------TTTTAACCCCAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------AAA----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCT
dm3 chr2R:15548324-15548496 - dme-mir-6-2 Known_mirbase CATTAT-------TTAATT--TT-----------TTTTTTT-TTT----------------------------------------------GG---CACACGAATAA---CCATGCCGT-------TTTTAACCCAAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------AAA----AACT--ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCT
droEre2 scaffold_4845:9748578-9748747 - der-mir-6-2 Known_mirbase CATCAT-------TTTGT----------TGCC-TTA----T-TTT----------------------------------------------GG---TGCACGAAAAC---CCATACCGT-------TTTTAACCCCAGGGAACCTCTGCTGCTGATATATTAT-----TG-------------------------A-A----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAGCGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCT
droYak3 2R:13624294-13624465 + dya-mir-6-2 Known_mirbase CATTAA-------T-AATTTG------TTGCT-T------T-TTT----------------------------------------------TG---CTCACAAGTAA---CCATACCGT-------TTTTAACCGCAGGGAACCTCTGCTGCTGATATATTAT-----TG-------------------------AGA----AACT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CCCGCATTT------TTG---TCACCT
droEug1 scf7180000409474:2397350-2397525 + CATCAT-------TCGTTT--TG-----------------TTTTTTGTTTTA-T----------------------------------A---T---TTGACAAACAA---CCATGCCGT-------TTTTAACCCCAGGGAACCTCTGCTGTTGATATATAAT-----CA-------------------------GGA----AACT--ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCATCGATTTGTCATCTGTGG-----------------------CATGCATTT------GTG---TCACCT
droBia1 scf7180000302143:3059243-3059402 - CAGAC------------------------GTT-TAG----TTCT-----------------------------------------------CC---CTGACAAGTAT---CTATTCCGT-------TCTCAACCCCAGGGAACTTCTGCTGCTGATATATTAA-----CT-------------------------A-A----AG-----CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-----------------------CACGCATTT------GTG---TCACCT
droTak1 scf7180000415384:84565-84727 + CAGT------------------------CGTT-TTA----GTTT-----------------------------------------------AT---CTGACAAACAC---CCATTCCGT-------TTTTAACCCCAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------A-A----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-----------------------CATGCATTT------GTG---TCAACT
droEle1 scf7180000491201:2013402-2013576 - CAAAGCGG-CCAAT-A-T---------TTGTT-TTC----ATTT-----------------------------------------------TC---CCGACAAATAC---CCATTCCGT-------TTTTAACCACAGGGAACTTCTGCTGCTGATATATTAT-----CA-------------------------A-A----AACT--TTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTCAAG-TCCAGCGATTTGTCATACAGGG-----------------------AACGGATTT------GTG---TCACCT
droRho1 scf7180000780066:74180-74347 + CAAAGC-------TC------------TAGTT-TTA----TTTT-----------------------------------------------TC---CTGACAAATAC---CAAGTCTGT-------TTTTAACCACAGGGAACTTCTGCTGCTGATATATTAT-----CG-------------------------A-A----AACT--TTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAGCGATTTGTCATCCAGGA-----------------------AACGCATTT------GTG---TCACCT
droFic1 scf7180000454039:847464-847639 - CAATGT-------TT------------TTGTT-TTT----CTTTT-----CGT-------------------------------------TCGTATCTGACAAACAT---CCATTCCGT-------TTTTAACCCTAGGGAACTTCTGCTGCTGATATATTAT-----CG-------------------------A-A----AACT--CGTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTTAAG-TCCAGCGATTTGTCATCTGCGG-----------------------CACGCATTC------GTG---TCTCCT
droKik1 scf7180000302679:88770-88945 - CAAGGC-------TCATTT--GG-----------------GTTTATATTTTCT-------------------------------------TAGT--GTGACA-TTTC---TTCTACCGT-------GGTTAGCCCCAGGGAACTGCTGCTGCTGATATATTAT-----CA-------------------------A-G----AATT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TTCAGCGATTTGTCATCAGCGC-----------------------GGCCTCAGT------GTA---TCATCT
droAna3 scaffold_13266:9731917-9732096 + dan-mir-6-2 Known_mirbase TGTTCT-------GT-------------------GA----TTTTT-----CGTT----------------------------------ATCCG---ACGACAAATAT----TATTCCGG-------TGTTAGCCCCAGGGAACTGTTGCTGCTGATATATTAT-----TCTCCCAAAAA-A--------------AAA----ATCA--CCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAG-TTCACCGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACGT
droBip1 scf7180000396427:874856-875044 + CCAAGA-C-CCAAG-AAT----------TGT---GA----TTTTT-----CGCC----------------------------------ATCCG---A-CAGATATTA---TTATTCCGG-------TGTTAACCCCAGGGAACTGTTGCTGCTGATATATTATACTTTCG-------------------------A-A--CTATCT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACCGTCAAG-TTCAACAATTTGTCATCTGTGG-----------------------CACGAATTT------GTGGCATCACCT
dp5 3:12676900-12677066 - dps-mir-6-2 Known_mirbase GT---------------------------GCTTCC-----------------------------------------------------AGTTA---CTGACAAATCC---CCGTGCCGTGT-----CCCCAACCGCAGGGAACCGCTGCTGCTGATATATTAT-----CCACCCATCTT-T---------------GA----CATT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCTCCGCCGC--------------------CGCGCATTC------GC----------
droPer2 scaffold_2:8906606-8906773 + dpe-mir-6-3 Known_mirbase GT---------------------------GCTTCC-----------------------------------------------------AGTTA---CTCACAAATCC---CCGTGCCGTGT-----CCCCAACCGCAGGGAACCGCTGCTGCTGATATATTAT-----CCACCCATCTT-T---------------GA----CATT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCTCCGCCGC--------------------CGCGCATT--------------CACC-
droWil2 scf2_1100000004514:1651099-1651277 - dwi-mir-6-2 Known_mirbase TATTAT-------TTAGTG--AAGT---------GT----T-TT--------------------------------------------------------------------TTAAAG---TTTTTGTTTAACCGCAGGGAACTGTCGCTGCTGATATATA-T---------ATATTAT-TGTTATATATAATTTAAAAATGATTT--TCTATATCACAGTGGCTGTTCTTTTTGGTTTTACGATCATT-TTCAACAACTTT--ATTTTTAG------------------------ATTTCTCT------GTT---TTACCG
droVir3 scaffold_12875:4112719-4112935 + dvi-mir-6-2 Known_mirbase CGTTGA-TTTCTTA-AAT----------TGT---G--------------------------------------AAAATTGAATA-AATATTTG---CTGACAAATTTCTTATGTGCTAT-------GTTTAACCGCAGGGAACTGCTGCTGCTGATATACTGT-----ATA----GATTATAT-------------------CGAT--TCCATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAATC-CACAACAATTTGTCAGCCGAAA-GTACTTTTATTATTAACTAACTTGTGCAATT------TGT---TCACTT
droMoj3 scaffold_6496:20936083-20936297 - dmo-mir-6-2 Known_mirbase CATTAT-------T----------------------------TTT-----CGCCAATTGCCAAATATAAAGTGAAACATGAGCACAGTATTCG---CAGACATATAT---CCAGAGAG---ATTGCGTTTAACCGCAGGGAACTGCTGCTGCTGATATACTAT-----AT----GTATT-TGT-------------------CAGTACTCTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAAATAGCCAACAATTTGTC---TGTGA-----------------------AATAAATCTTGAATAGTG---TTATCT
droGri2 scaffold_5621:3485-3659 + dgr-mir-6-5 Known_mirbase CAAAATGA-G---T-AA-----------TGTT---A----TC----------------------------------------------AACCG---CTGCATAAATTCACCAATGCTAT-------GTTTAACCACAGGGAACTGCTGCTGCTGATATACAAC-----CA-----TATT-T--------------ATA----CACG--ACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATT-TGCAACGATTTGTCAGTGTT-T-----------------------TA---TTCT------ATT---TTATTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATTAT-------TTAATT--TACTTT------TTT----T-TTT----------------------------------------------CG---CACACGAATAA---CCATGCCGT-------TTTTAACCCCAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------AAA----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................223816.00244800797972722282537553601315000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATA...................................................................................................................................................................231289.002890033000701159703700000
........................................................................................................................................AGGGAACTTCTGCTGCTGATAT....................................................................................................................................................................221186.00186003210110864402100000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................213162.6748810811199451247312154104000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................23266.0013200851024018751000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................19361.3318400212713562641000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................20350.671520033123571614952001000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................23350.671520001009061000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATA.....................................................................................................................................................................21149.004900150000116110600000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................24343.331300000007852000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................18339.001170000610514001000000
...........................................................................................................................................................................................................................GTGGCTGTTCTTTTT........................................................................................15318.67560000000027281000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21318.3355000550000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGT...............................................................................................15315.00450000000012302010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.......................................................................................23313.33400000002119000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA......................................................................................24312.67380000002117000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGAT......................................................................................................................................................................2018.00800100000320200000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................2237.3322000000128101000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAA..................................................................................................................................................................2417.00700100000320100000
....................................................................................................................................................................................................................TATCACAGTGGCTGTT..............................................................................................1632.67800000010052000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................2032.67800053000000000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................2222.50500040001000000000
...............................................................................................................................................................TTAT-----TG-------------------------AAA----AACT--CCTA..............................................................................................................1712.00200000000020000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAAA.................................................................................................................................................................2512.00200000000200000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.........................................................................................2131.33400000022000000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................2031.33400030010000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA......................................................................................2421.00200000011000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAC..................................................................................................................................................................2411.00100000000010000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATATTAT-----..........................................................................................................................................................2711.00100000000010000000
.........................................................................................................AA---CCATGCCGT-------TTTTAACCCA..........................................................................................................................................................................................2111.00100000010000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATAA....................................................................................................................................................................2211.00100100000000000000
..........................................................................................................................................GGAACTTCTGCTGCTGATATA...................................................................................................................................................................2111.00100000000100000000
...........................................................................................................................................................................................................................GTGGCTGTTCTTTTTG.......................................................................................1621.00200000000020000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAT..................................................................................................................................................................2411.00100100000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGC.....................................................................................2511.00100010000000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGA.......................................................................................................................................................................1911.00100100000000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGG.......................................................................................................................................................................1911.00100100000000000000
.......................................................................................................................................CAGGGAACTTCTGCTGCTGATAT....................................................................................................................................................................2311.00100000000000100000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATATT.................................................................................................................................................................2511.00100000000100000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................2030.67200200000000000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA.......................................................................................2230.67200000002000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................2130.67200020000000000000
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................1830.67200010010000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................2230.67200010010000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAAA.......................................................................................2340.50200000011000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC......................................................................................2420.50100100000000000000
droSec2
CATTAT-------TTAATT--TACT---------TT----T-TT----------------------------------------------TTG---CACACGAATAA---CCATGCCGT-------TTTTAACCCCAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------AAA----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22327140.338142117131478922772
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2138065.33241962271023821138
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................2323579.5071591011697978
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................2031417.004251233419035
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................193259.677793075719
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................233126.33379203689
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................183112.00336003342
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21392.0027614701281
........................................................................................................................................AGGGAACTTCTGCTGCTGATATA...................................................................................................................................................................23172.007220700
........................................................................................................................................AGGGAACTTCTGCTGCTGATAT....................................................................................................................................................................22171.007120681
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................18367.33202101965
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA......................................................................................24254.50109101080
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................22332.339720941
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................22329.008710851
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................22222.5045160290
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................20319.6759100481
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTG.......................................................................................19216.503300330
........................................................................................................................................AGGGAACTTCTGCTGCTGATA.....................................................................................................................................................................21116.001600160
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................24314.004200411
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................20311.3334230110
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................23311.003310320
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................2237.332220200
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG......................................................................................2417.0071060
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................1936.331920170
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.........................................................................................1935.331620140
........................................................................................................................................AGGGAACTTCTGCTGCTGAT......................................................................................................................................................................2015.0050050
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC......................................................................................2425.001000100
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.........................................................................................2134.331300130
.........................................................................................................AA---CCATGCCGT-------TTTTAACCCC..........................................................................................................................................................................................2114.0040040
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................2133.671100110
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.......................................................................................2333.331000100
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG......................................................................................2313.0030030
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.........................................................................................1832.3371060
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..........................................................................................1932.3375020
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................2132.0062040
.......................................................................................................ATAA---CCATGCCGT-------TTTTAACCCC..........................................................................................................................................................................................2312.0020020
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................2231.0030030
........................................................................................................................................AGGGAACTTCTGCTGCTGATATATT.................................................................................................................................................................2511.0010010
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAT..................................................................................................................................................................2411.0010010
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTG.......................................................................................2021.0021010
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA.......................................................................................2231.0030030
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGGT.....................................................................................2411.0010010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTA..........................................................................................2031.0030030
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................2031.0030021
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAG..................................................................................................................................................................2411.0010010
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.......................................................................................2121.0021010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA........................................................................................2230.6720020
dm3
CATTAT-------TTAATT--TT-----------TTTTTTT-TTT----------------------------------------------GG---CACACGAATAA---CCATGCCGT-------TTTTAACCCAAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------AAA----AACT--ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22320801.006240300008135722249235251300000010000000000000000000000000000000000000500000000000000000000000020472170000000000000000000000000110000000000000000000000000000100000000000000000000000010000000000000000000000100000000000000000000000010015459211244212162759343046154161800002000000000000000000000000000000000197080077012300000000637004648179130060059000010003175384212536104243868269366685913240
........................................................................................................................................AGGGAACTTCTGCTGCTGATATA...................................................................................................................................................................23114804.00148040000001091822520000000000000000000000020000000000000000000000000000000000000000000010003566735100542204010004004000219110014145435579001801213890020001000000200000000001024967614049100010000000000000000000200000100000000001000000000000100000000000000000022001711900040000421100000000000000010000100000010001000000000000000004567000100200000000010000000010000000010010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2134534.671360400003046283290234340100000000000000000000000000000000000001000020000000000000000000000000015020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000110033120213534787185631510020300000000000000000000000000000000000000043028028049000000004601738273180020016000000014114203192122726892863001423102157210
........................................................................................................................................AGGGAACTTCTGCTGCTGATAT....................................................................................................................................................................2212093.002093000000841510000000000000000000000008300000000000000000000000000000000000000000000006158915685150100012000001001200002849000484064000000000000000000000000121477130000000000000000000000000000000000000000000000000000000000000000000000000000015041002000020900000000000000000000000000000000000000000000000005151300000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................203778.672336000000415183400000000000000000000000000000000000000000000001000000000000000000000000001410000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000300000000000000000000000000116410359327647014400000000000000000000000000000000000000117050705000010004796813404002000000031024081110015011117437113172927090
........................................................................................................................................AGGGAACTTCTGCTGCTGAT......................................................................................................................................................................201426.0042600000000100000000000000000000000004020000000000000000000000000000000000000000000000000310000000000000000000000000000300000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001100000000000000001000000000000000000000000000000005100000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................193418.331255000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000100205110201100080000000000000000000000000000000000000003010310000000003846242015000010000011000100100000002641223295323030
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................232281.005620000003121360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203249014500200000000000000000000000000000000000000010002000000000003298700000000000000001003000030000003690011010
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAT..................................................................................................................................................................241269.00269000000330000000000000000000000000010000000000000000000000000000000000000000000000732541350000000000000007000011900050015000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071000000000000000000000000000000000010000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................233152.334570000000901000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014002000000000000000000000000000000000000000201010000000000112630600000000000000000000000000000000000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATA.....................................................................................................................................................................211139.00139000000100000000000000000000000000032000000000000000000000000000000000000000000000067955000000000000000000000000040000000000000000000000000000614000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000042500000000000000000000000000000000100000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................223125.00375000020241847730000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140004063004000000000000000000000000000000000000000301040200000000011300000101000000001101000010000101200000010
.......................................................................................................................................AAGGGAACTTCTGCTGCTGATATA...................................................................................................................................................................241117.00117000000140000000000000000000000000000000000000000000000000000000000000000000000000472100240000000000000100000083000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
.........................................................................................................AA---CCATGCCGT-------TTTTAACCCA..........................................................................................................................................................................................211112.00112000000230000000000000000000000000000000000000000000000000000000000000000000000000314303000000000000000000000860005001000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000000000000000000000000
........................................................................................................TAA---CCATGCCGT-------TTTTAACCCA..........................................................................................................................................................................................221103.0010300000000000000000000000000000000000000000000000000000000000000000000000000000000016180325000000000000000000000200001090000000000000000000000000212300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
.........................................................................................................................................GGGAACTTCTGCTGCTGATATA...................................................................................................................................................................22184.0084000000240000000000000000000000000000000000000000000000000000000000000000000000000271100220000000000000001000005000000000100000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................23371.0021300000012894000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251133034410008000000000000000000000000000000000000000100101001300000000016200000300000000000000000000000001170000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................22370.332110000001459311310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130500010000000000000000000000000000000000000001000000000000000571400000000000000000000000000000000110000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATAA..................................................................................................................................................................24153.00530000000000000000000000000000000000100000000000000000000000000000000000000000000005502400000000000000000000000000007000000000000000000000000014030000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
..........................................................................................................A---CCATGCCGT-------TTTTAACCCA..........................................................................................................................................................................................20151.00510000000000000000000000000000000000000000000000000000000000000000000000000000000002700090000010000000000000003000200300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................18350.33151000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200200000000000000000000000000000000000000010000010000000001112310000000000000000000000000000011240000000
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................18347.67143000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003010150800000000000000000000000000000000000000000000000101000000000971400000000000000000000000000000000110000000
.......................................................................................................ATAA---CCATGCCGT-------TTTTAACCCA..........................................................................................................................................................................................23147.00470000001000000000000000000000000000000000000000000000000000000000000000000000000002543060000000000000000000004000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
.......................................................................................................................................AAGGGAACTTCTGCTGCTGATAT....................................................................................................................................................................23139.00390000000010000000000000000000000000000000000000000000000000000000000000000000000008804500000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATC...................................................................................................................................................................23138.00380000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000010000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................24335.00105000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000002211310202003000000000000000000000000000000000000000809012040000000001000000301000000000000010000000000000000000
...............................................................................................................CATGCCGT-------TTTTAACCCA..........................................................................................................................................................................................18130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000001100020000000000000000010002000200700000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21329.67890000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020004153002000000000000000000000000000000000000000102000000000000057400000000000000000110000000000010010000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................22325.007500001082812500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204000000000000000000000000000000000000000000000100000000000009400000000000000000000000000000000100000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATATT.................................................................................................................................................................25120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGA.......................................................................................................................................................................19120.00200000000000000000000000000000000000500000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATG...................................................................................................................................................................23119.0019000000011100000000000000000000000000000000000000000000000000000000000000000000000111040000000000000000000010000100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.........................................................................................................................................GGGAACTTCTGCTGCTGATAT....................................................................................................................................................................21117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000001401020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.........................................................................................21316.6750000010515131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000004000000000000000000000000000000001000000000
........................................................................................................................................AGGGAACTTCTGCTGCTGATATT...................................................................................................................................................................23116.0016000000210000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000002000000100000000000000000000000003200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
..............................................................................................................CCATGCCGT-------TTTTAACCCA..........................................................................................................................................................................................19115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000200160000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000010000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................21313.67410000202427000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000015700000000000000000000000000000000000000000
.......................................................................................................................................AAGGGAACTTCTGCTGCTGATA.....................................................................................................................................................................22112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................22311.673500000001001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010006000000000000000000000000000000000000000000000000000000000000014100000000000000000000000000000000100000000
droEre2
CATCAT-------TTTGT----------TGCC-TTA----T-TTT----------------------------------------------GG---TGCACGAAAAC---CCATACCGT-------TTTTAACCCCAGGGAACCTCTGCTGCTGATATATTAT-----TG-------------------------A-A----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAGCGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACCTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22310965.6732897490027970056160
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2132527.677583713686301510
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................223198.00594958500000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................203195.675877550501240
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................213131.673953702500000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................232114.002284518200100
........................................................................................................................................AGGGAACCTCTGCTGCTGATATA...................................................................................................................................................................23144.00442011013000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................21326.007817700000
........................................................................................................................................AGGGAACCTCTGCTGCTGATAT....................................................................................................................................................................22125.00257909000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................23319.005715600000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................23318.6756163800020
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................20317.3352411100000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................20316.334904801000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................19314.3343103001110
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................20310.673223900000
........................................................................................................................................AGGGAACCTCTGCTGCTGATA.....................................................................................................................................................................2118.0081205000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC......................................................................................2425.501101100000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................2235.331661000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG......................................................................................2413.0033000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................2222.5052300000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................2132.3374300000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..........................................................................................1932.0066000000
..........................................................................................................C---CCATACCGT-------TTTTAACCCC..........................................................................................................................................................................................2012.0020200000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................1932.0061500000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG......................................................................................2212.0020200000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGCA....................................................................................2612.0021100000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC......................................................................................2431.6750500000
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................1831.3340400000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................2231.3341300000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT........................................................................................2331.3342200000
........................................................................................................................................AGGGAACCTCTGCTGCTGATAC....................................................................................................................................................................2211.0010100000
..........................................................................................................................................GGAACCTCTGCTGCTGATATT...................................................................................................................................................................2111.0010100000
........................................................................................................................................AGGGAACCTCTGCTGCTGAT......................................................................................................................................................................2011.0010001000
.........................................................................................................................................GGGAACCTCTGCTGCTGATATA...................................................................................................................................................................2211.0011000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC........................................................................................2231.0030300000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................1831.0032100000
.........................................................................................................................................GGGAACCTCTGCTGCTGATAT....................................................................................................................................................................2111.0011000000
.......................................................................................................................................CAGGGAACCTCTGCTGCTGATAT....................................................................................................................................................................2311.0011000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.........................................................................................2131.0030300000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.........................................................................................1830.6720200000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................2430.6722000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................2230.6722000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.........................................................................................1930.6720200000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTACC.......................................................................................2330.6720200000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.......................................................................................2330.6720200000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTG........................................................................................2130.6722000000
droYak3
CATTAA-------T-AATTTG------TTGCT-T------T-TTT----------------------------------------------TG---CTCACAAGTAA---CCATACCGT-------TTTTAACCGCAGGGAACCTCTGCTGCTGATATATTAT-----TG-------------------------AGA----AACT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGG-----------------------CCCGCATTT------TTG---TCACCTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22388528.672655860234265335500120000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................21315870.00476100634753810080000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................2232566.67770000770000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................2031006.673020015300310010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................213276.008280082800000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................232209.004180241600000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................233165.004950149400000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................203138.334150041500000000
........................................................................................................................................AGGGAACCTCTGCTGCTGATATA...................................................................................................................................................................231120.001200077430000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21392.002760926700000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................23390.332710226900000000
........................................................................................................................................AGGGAACCTCTGCTGCTGATAT....................................................................................................................................................................22171.00710052180100000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................19362.001860218400000000
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................18347.001410114000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................22331.3394009400000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................20322.3367006700000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC......................................................................................24221.5043004300000000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................19321.0063016200000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................21316.6750005000000000
........................................................................................................................................AGGGAACCTCTGCTGCTGATA.....................................................................................................................................................................21113.001300940000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................20312.6738023600000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................1837.3322012100000000
........................................................................................................................................AGGGAACCTCTGCTGCTGATAC....................................................................................................................................................................2217.00700700000000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................2235.6717001700000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................2235.6717001700000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC........................................................................................2134.6714001400000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................2224.50900900000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG......................................................................................2214.00400400000000
..........................................................................................................A---CCATACCGT-------TTTTAACCGC..........................................................................................................................................................................................2014.00400310000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTGC........................................................................................2233.00900900000000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.........................................................................................1832.67800800000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC...........................................................................................1932.67800800000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.........................................................................................1932.33701600000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTT....................................................................................2412.00200200000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.........................................................................................2132.00600600000000
........................................................................................................................................AGGGAACCTCTGCTGCTGAT......................................................................................................................................................................2012.00200110000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT.....................................................................................2312.00200200000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG......................................................................................2312.00200200000000
..............................................................................................................CCATACCGT-------TTTTAACCGC..........................................................................................................................................................................................1912.00200200000000
droEug1
CATCAT-------TCGTTT--TG-----------------TTTTTTGTTTTA-T----------------------------------A---T---TTGACAAACAA---CCATGCCGT-------TTTTAACCCCAGGGAACCTCTGCTGTTGATATATAAT-----CA-------------------------GGA----AACT--ACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCATCGATTTGTCATCTGTGG-----------------------CATGCATTT------GTG---TCACCTSizeHit CountTotal NormTotal
No Reads
droBia1
CAGAC------------------------GTT-TAG----TTCT-----------------------------------------------CC---CTGACAAGTAT---CTATTCCGT-------TCTCAACCCCAGGGAACTTCTGCTGCTGATATATTAA-----CT-------------------------A-A----AG-----CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-----------------------CACGCATTT------GTG---TCACCTSizeHit CountTotal NormTotal
No Reads
droTak1
CAGT------------------------CGTT-TTA----GTTT-----------------------------------------------AT---CTGACAAACAC---CCATTCCGT-------TTTTAACCCCAGGGAACTTCTGCTGCTGATATATTAT-----TG-------------------------A-A----AACT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-----------------------CATGCATTT------GTG---TCAACTSizeHit CountTotal NormTotal
No Reads
droEle1
CAAAGCGG-CCAAT-A-T---------TTGTT-TTC----ATTT-----------------------------------------------TC---CCGACAAATAC---CCATTCCGT-------TTTTAACCACAGGGAACTTCTGCTGCTGATATATTAT-----CA-------------------------A-A----AACT--TTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTCAAG-TCCAGCGATTTGTCATACAGGG-----------------------AACGGATTT------GTG---TCACCTSizeHit CountTotal NormTotal
No Reads
droRho1
CAAAGC-------TC------------TAGTT-TTA----TTTT-----------------------------------------------TC---CTGACAAATAC---CAAGTCTGT-------TTTTAACCACAGGGAACTTCTGCTGCTGATATATTAT-----CG-------------------------A-A----AACT--TTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAGCGATTTGTCATCCAGGA-----------------------AACGCATTT------GTG---TCACCTSizeHit CountTotal NormTotal
No Reads
droFic1
CAATGT-------TT------------TTGTT-TTT----CTTTT-----CGT-------------------------------------TCGTATCTGACAAACAT---CCATTCCGT-------TTTTAACCCTAGGGAACTTCTGCTGCTGATATATTAT-----CG-------------------------A-A----AACT--CGTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTTAAG-TCCAGCGATTTGTCATCTGCGG-----------------------CACGCATTC------GTG---TCTCCTSizeHit CountTotal NormTotal
No Reads
droKik1
CAAGGC-------TCATTT--GG-----------------GTTTATATTTTCT-------------------------------------TAGT--GTGACA-TTTC---TTCTACCGT-------GGTTAGCCCCAGGGAACTGCTGCTGCTGATATATTAT-----CA-------------------------A-G----AATT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TTCAGCGATTTGTCATCAGCGC-----------------------GGCCTCAGT------GTA---TCATCTSizeHit CountTotal NormTotal
No Reads
droAna3
TGTTCT-------GT-------------------GA----TTTTT-----CGTT----------------------------------ATCCG---ACGACAAATAT----TATTCCGG-------TGTTAGCCCCAGGGAACTGTTGCTGCTGATATATTAT-----TCTCCCAAAAA-A--------------AAA----ATCA--CCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAG-TTCACCGATTTGTCATTTGTGG-----------------------CACGCATTT------GTG---TCACGTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22315043.3345130367447520074
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2133049.3391489790392028
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................223462.001386013860000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................203276.00828267920082
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................21357.6717301720001
........................................................................................................................................AGGGAACTGTTGCTGCTGATATA...................................................................................................................................................................23143.00430348001
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................20337.0011101110000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21335.6710740670000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................23334.6710401040000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................23333.671013980000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................19317.33528390023
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................23214.00282240011
........................................................................................................................................AGGGAACTGTTGCTGCTGATAT....................................................................................................................................................................22112.0012092100
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................1938.67260260000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................2038.00245190000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................1836.00180180000
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................1836.00180180000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................2036.00187110000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................2235.33160150001
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................2134.33130130000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................2233.3310190000
...............................................................................................................................................................TTAT-----TCTCCCAAAAA-A--------------AAA----ATCA--CCTA..............................................................................................................2713.003030000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................2433.009170010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT......................................................................................2422.505050000
........................................................................................................................................AGGGAACTGTTGCTGCTGAT......................................................................................................................................................................2012.002020000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..........................................................................................1932.006330000
........................................................................................................................................AGGGAACTGTTGCTGCTGATA.....................................................................................................................................................................2112.002020000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.........................................................................................1931.675050000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................2231.675050000
...............................................................................................................................................................TTAT-----TCTCCCAAAAA-A--------------AAA----ATCA--CCT...............................................................................................................2611.001010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC...........................................................................................1931.003030000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC........................................................................................2131.003030000
.......................................................................................................................................CAGGGAACTGTTGCTGCTGATATA...................................................................................................................................................................2411.001010000
........................................................................................................................................AGGGAACTGTTGCTGCTGATAC....................................................................................................................................................................2211.001010000
......................................................................................................AATAT----TATTCCGG-------TGTTAGCCCC..........................................................................................................................................................................................2311.001010000
........................................................................................................................................AGGGAACTGTTGCTGCTGATATT...................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.........................................................................................1830.672020000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC........................................................................................2230.672020000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.......................................................................................2330.672020000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..........................................................................................2130.672020000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA......................................................................................2420.501010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA.......................................................................................2330.331010000
droBip1
CCAAGA-C-CCAAG-AAT----------TGT---GA----TTTTT-----CGCC----------------------------------ATCCG---A-CAGATATTA---TTATTCCGG-------TGTTAACCCCAGGGAACTGTTGCTGCTGATATATTATACTTTCG-------------------------A-A--CTATCT--CCTATATCACAGTGGCTGTTCTTTTTGGTTGCACCGTCAAG-TTCAACAATTTGTCATCTGTGG-----------------------CACGAATTT------GTGGCATCACCTSizeHit CountTotal NormTotal
No Reads
dp5
GT---------------------------GCTTCC-----------------------------------------------------AGTTA---CTGACAAATCC---CCGTGCCGTGT-----CCCCAACCGCAGGGAACCGCTGCTGCTGATATATTAT-----CCACCCATCTT-T---------------GA----CATT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCTCCGCCGC--------------------CGCGCATTC------GC----------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22338201.331146040681510770178307000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2136091.0018273012371700029205000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................2231760.0052800452724000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................203403.001209013410741000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................232249.004980794190000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................213194.005820505770000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................213169.33508025060000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................233159.004770124641000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................233100.003000222770001000
........................................................................................................................................AGGGAACCGCTGCTGCTGATATA...................................................................................................................................................................23180.0080054802700000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................20362.00186001842000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................20340.001200106140000000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................22330.339107840000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................19327.6783024590000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC......................................................................................24226.505300530000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................22324.677406680000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................20317.0051032190000000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT........................................................................................23313.674108330000000
........................................................................................................................................AGGGAACCGCTGCTGCTGATAT....................................................................................................................................................................22113.001300120100000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC......................................................................................24310.673206260000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................22310.333109220000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..........................................................................................1938.332502230000000
...............................................................................................................................................................TTAT-----CCACCCATCTT-T---------------GA----CATT--TCT...............................................................................................................2518.0080050300000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................2138.002401230000000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................1937.6723010130000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................1837.002108130000000
........................................................................................................................................AGGGAACCGCTGCTGCTGATAC....................................................................................................................................................................2216.0060060000000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..........................................................................................2135.331600160000000
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................1835.001503120000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA......................................................................................2424.5090090000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................2434.001202100000000
........................................................................................................................................AGGGAACCGCTGCTGCTGATA.....................................................................................................................................................................2114.0040030100000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................2224.0080710000000
........................................................................................................................................AGGGAACCGCTGCTGCTGATATC...................................................................................................................................................................2313.0030010000020
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.......................................................................................2333.0090180000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.......................................................................................2332.0060230001000
........................................................................................................TCC---CCGTGCCGTGT-----CCCCAACCGC..........................................................................................................................................................................................2412.0020020000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC........................................................................................2132.0060150000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG......................................................................................2412.0020110000000
........................................................................................................................................AGGGAACCGCTGCTGCTGA.......................................................................................................................................................................1912.0020000000020
........................................................................................................................................AGGGAACCGCTGCTGCTGAT......................................................................................................................................................................2012.0020000101000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC...........................................................................................1931.6750050000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTT...........................................................................................1831.6750500000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.......................................................................................2121.5030120000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC........................................................................................2231.3340040000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC.......................................................................................2231.3340310000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC.....................................................................................2531.3340040000000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTC.........................................................................................2231.0030030000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.........................................................................................2131.0030030000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGGAA...................................................................................2711.0010100000000
.......................................................................................................ATCC---CCGTGCCGTGT-----CCCCAACCGC..........................................................................................................................................................................................2511.0010010000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGC.....................................................................................2511.0010010000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC......................................................................................2221.0020020000000
...............................................................................................................................................................TTAT-----CCACCCATCTT-T---------------GA----CATT--TCTA..............................................................................................................2611.0010000100000
........................................................................................................................................AGGGAACCGCTGCTGCTGATATTC..................................................................................................................................................................2411.0010000000010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA........................................................................................2231.0030020001000
droPer2
GT---------------------------GCTTCC-----------------------------------------------------AGTTA---CTCACAAATCC---CCGTGCCGTGT-----CCCCAACCGCAGGGAACCGCTGCTGCTGATATATTAT-----CCACCCATCTT-T---------------GA----CATT--TCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCTCCGCCGC--------------------CGCGCATT--------------CACC-SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................223146.00438941300115
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................21325.00758620005
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21314.67440440000
........................................................................................................................................AGGGAACCGCTGCTGCTGATAT....................................................................................................................................................................22112.00121002000
........................................................................................................................................AGGGAACCGCTGCTGCTGATATA...................................................................................................................................................................2318.008404000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................2325.0010070003
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................2035.0015680001
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................2033.009090000
........................................................................................................................................AGGGAACCGCTGCTGCTGATATAA..................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................2221.002020000
........................................................................................................................................AGGGAACCGCTGCTGCTGATA.....................................................................................................................................................................2111.001001000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................1931.003030000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................2030.672020000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGA......................................................................................2220.501010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................2230.331010000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................1930.331010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................2330.331010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................2230.331010000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.........................................................................................1930.331010000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................2230.331010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................2030.331100000
droWil2
TATTAT-------TTAGTG--AAGT---------GT----T-TT--------------------------------------------------------------------TTAAAG---TTTTTGTTTAACCGCAGGGAACTGTCGCTGCTGATATATA-T---------ATATTAT-TGTTATATATAATTTAAAAATGATTT--TCTATATCACAGTGGCTGTTCTTTTTGGTTTTACGATCATT-TTCAACAACTTT--ATTTTTAG------------------------ATTTCTCT------GTT---TTACCGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22335155.671054670180701036555
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2138217.002465103441243042
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................2031168.673506059534411
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................2331099.333298010032880
........................................................................................................................................AGGGAACTGTCGCTGCTGATATA...................................................................................................................................................................231333.003330213300
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................193320.009600609504
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................243217.006510506460
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................223189.675690405650
........................................................................................................................................AGGGAACTGTCGCTGCTGATAT....................................................................................................................................................................221136.001360101350
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................183128.333850303820
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................23283.501670601610
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21370.3321101430680
........................................................................................................................................AGGGAACTGTCGCTGCTGATA.....................................................................................................................................................................21162.0062010610
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAA.....................................................................................25346.001380001380
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................18345.001350101340
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.......................................................................................23341.671250001250
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................22340.331210101200
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................23332.3397000970
........................................................................................................................................AGGGAACTGTCGCTGCTGAT......................................................................................................................................................................20119.0019000190
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................22318.6756000560
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................20316.00480310170
........................................................................................................................................AGGGAACTGTCGCTGCTGATATAA..................................................................................................................................................................24111.0011000110
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................20310.33310120190
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.........................................................................................2139.3328010270
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................2238.6726000260
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA......................................................................................2437.3322000220
........................................................................................................................................................................................................TGATTT--TCTATATCACAGTGGC..................................................................................................2217.00700070
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................1936.0018000180
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..........................................................................................2134.6714000140
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................2134.3313000130
.........................................................................................................................................GGGAACTGTCGCTGCTGATATA...................................................................................................................................................................2214.00400040
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC......................................................................................2433.6711000110
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA......................................................................................2423.50700070
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA........................................................................................2243.2513000130
........................................................................................................................................AGGGAACTGTCGCTGCTGATATT...................................................................................................................................................................2313.00300030
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..........................................................................................1932.67807010
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTA.......................................................................................1932.67800080
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................2222.50500050
........................................................................................................................................AGGGAACTGTCGCTGCTGATATAT..................................................................................................................................................................2412.00200020
........................................................................................................................................AGGGAACTGTCGCTGCTGATATC...................................................................................................................................................................2312.00200020
...................................................................................................................AAG---TTTTTGTTTAACCGC..........................................................................................................................................................................................1812.00200020
............................................................................................................................................AACTGTCGCTGCTGATATA...................................................................................................................................................................1912.00200020
........................................................................................................................................AGGGAACTGTCGCTGCTGA.......................................................................................................................................................................1912.00200020
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.........................................................................................1932.00600060
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.........................................................................................1831.67500050
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTAA......................................................................................2231.33400040
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTT...........................................................................................2031.33400040
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT........................................................................................2331.33402020
........................................................................................................................................AGGGAACTGTCGCTGCTGATATG...................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................2131.00300030
.........................................................................................................................................GGGAACTGTCGCTGCTGAT......................................................................................................................................................................1911.00100010
.......................................................................................................................................................................................................ATGATTT--TCTATATCACAGTGGT..................................................................................................2311.00100010
........................................................................................................................................................................................................TGATTT--TCTATATCACAGTGGT..................................................................................................2211.00100010
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.......................................................................................2121.00200020
.........................................................................................................................................GGGAACTGTCGCTGCTGATAT....................................................................................................................................................................2111.00101000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTGGT.....................................................................................2211.00100010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAC.....................................................................................2531.00300030
.............................................................................................................................................................................................................T--TCTATATCACAGTGGCTGTTCT............................................................................................2311.00100010
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG......................................................................................2311.00100010
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT.....................................................................................2311.00100010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC......................................................................................2431.00301020
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA.......................................................................................2330.67200020
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................2030.67200011
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTA.......................................................................................2130.67200020
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.......................................................................................2330.67200020
droVir3
CGTTGA-TTTCTTA-AAT----------TGT---G--------------------------------------AAAATTGAATA-AATATTTG---CTGACAAATTTCTTATGTGCTAT-------GTTTAACCGCAGGGAACTGCTGCTGCTGATATACTGT-----ATA----GATTATAT-------------------CGAT--TCCATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAATC-CACAACAATTTGTCAGCCGAAA-GTACTTTTATTATTAACTAACTTGTGCAATT------TGT---TCACTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................22334949.671048490030299170000000000000000000000000000000000001433193312825233385284224634757247948683020205523572021149061432062301156613991044884415060934242427422502272
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2135932.671779800754630000000000000000000000000000000000004141814512435630533860650910478455998076453301979104008216197622010020370688662600610
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................2333316.00994800132000000000000000000000000000000000000001271159533527618240242077764140150644411018770020102435340001012146562221
........................................................................................................................................AGGGAACTGCTGCTGCTGATATA...................................................................................................................................................................2311766.00176600025000000011013000000000000000010580227318737200009261810000001000000300000022333100000002197510158101
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC......................................................................................243570.00171000045100000000000000000000000000000000000001118204955194976180126759060000392000000625010000715453
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................203518.001554006361000000000000000000000000000000000000135111015161836316666384439000199000000273343000000369284137137
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................223494.671484000109600000000000000000000000000000000000000041101311918233616281800015100100046900010158906
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................232359.007180001670000000000000000000000000000000000000011511152472715352218151200039000000151398200000664232819
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................233179.3353800164000000000000000000000000000000000000001710221517251013134760002200000014191120000005435251824
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC.....................................................................................253126.6738000027000000000000000000000000000000000000000851212442949532731190009200000000500100110000
........................................................................................................................................AGGGAACTGCTGCTGCTGATAT....................................................................................................................................................................22192.009200010000000000000000000000000000001112600000641112000001000000000001210000001251033
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................19350.33151001180000000000000000000000000000000000000002221356410994010170010001260000006822110
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................21335.3310600098000000000000000000000000000000000000000000000001001000510000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA......................................................................................24329.33880001000000000000000000000000000000000000000013244123102000000000052190000011413334
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.......................................................................................23328.3385001440000000000000000000000000000000000000100011120362330001300000000000000021100
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................22326.0078000140000000000000000000000000000000000000001103120510120000000000421300000067924
...............................................................................................................................................................CTGT-----ATA----GATTATAT-------------------CGAT--TCCA..............................................................................................................23126.002600000000000000000000000000000000601514000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................18321.0063000500000000000000000000000000000000000000010000142112200020000001013000000102268
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................20317.005100050000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................22316.334900080000000000000000000000000000000000000000220220100210006000000013000000210052
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................21311.333400321000000000000000000000000000000000000000200001010100000200000000100000020000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG......................................................................................22111.00110002000000000000000000000000000000000000000001011000001000000000000100000020110
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC......................................................................................2429.501900018000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCA......................................................................................2439.00270003000000000000000000000000000000000000000221112032020000500000000000000001110
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT........................................................................................2337.67230010000000000000000000000000000000000000010031213121003010100000000100000000100
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................1837.00210006000000000000000000000000000000000000000010000010010000010000011400000031010
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT.....................................................................................2317.0070002000000000000000000000000000000000000000000000010000000000000001100000010100
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA......................................................................................2426.50130002000000000000000000000000000000000000000000001000000000000000002400000003010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCCC......................................................................................2436.00180008000000000000000000000000000000000000000000200011101000100000000000003000000
........................................................................................................................................AGGGAACTGCTGCTGCTGATATAA..................................................................................................................................................................2416.0060000000000000000000000000000000020000100000000000000000000000000000000000001200
....................................................................................................................................................................................................................TATCACAGTGGCTGTTC.............................................................................................1735.67170000000000000000000000000000000000000000000000000010001000000000002400000030222
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................2225.50110006000000000000000000000000000000000000000000010000000000000000000300000010000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA.......................................................................................2335.33160002000000000000000000000000000000000000000001000010010000000000031100000102021
...........................................................................................................CTTATGTGCTAT-------GTTTAACCGC..........................................................................................................................................................................................2215.0050000000000000000000000000000000010010200000100000000000000000000000000000000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................2035.00150007000000000000000000000000000000000000000010100000000000000000000100000011102
........................................................................................................................................AGGGAACTGCTGCTGCTGATA.....................................................................................................................................................................2115.0050000000000000000000000000000000000010100000000001000000000000000000100000000100
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA......................................................................................2434.00120000000000000000000000000000000000000000000000000000000000000000033000000110121
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC......................................................................................2433.67110000000000000000000000000000000000000000000031100012001000200000000000000000000
........................................................................................................................................AGGGAACTGCTGCTGCTGATATACTGT-----ATG----...................................................................................................................................................3013.0030000000000000000000000000000000000000000000120000000000000000000000000000000000
........................................................................................................................................AGGGAACTGCTGCTGC..........................................................................................................................................................................1613.0030000000000000000000000000000000000000000000210000000000000000000000000000000000
........................................................................................................................................AGGGAACTGCTGCTGCTGAT......................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000010010000000000000000000000000100
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................2033.0090005000000000000000000000000000000000000000010000000000000100000000000000001001
..........................................................................................................TCTTATGTGCTAT-------GTTTAACCGC..........................................................................................................................................................................................2313.0030000000000000000000000000000000000000200001000000000000000000000000000000000000
.........................................................................................................TTCTTATGTGCTAT-------GTTTAACCGC..........................................................................................................................................................................................2413.0030000000000000000000000000000000010011000000000000000000000000000000000000000000
............................................................................................................TTATGTGCTAT-------GTTTAACCGC..........................................................................................................................................................................................2113.0030000000000000000000000000000000000000200000100000000000000000000000000000000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC.......................................................................................2233.0090008000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG......................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000010010
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGC.....................................................................................2312.0020001000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................GCAGGGAACTGCTGCTGCTGATA.....................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000001001
.......................................................................................................................................CAGGGAACTGCTGCTGCTGATATA...................................................................................................................................................................2412.0020000000000000000000000000000000000000100000000000000000000000000000000000010000
........................................................................................................................................AGGGAACTGCTGCTGCTGA.......................................................................................................................................................................1912.0020000000000000000000000000000000000000000000010000000000000000000000100000000000
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................1932.0060013000000000000000000000000000000000000000100000000000000000000000000000000001
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAC.......................................................................................2332.0060001000000000000000000000000000000000000000000100020010000100000000000000000000
........................................................................................................................................AGGGAACTGCTGCTGCTGATATT...................................................................................................................................................................2312.0020000000000000000000000000000000010000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................2231.6750000000000000000000000000000000000000000000000010030000000000000000000000000010
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTACC.....................................................................................2531.6750000000000000000000000000000000000000000000000000001100000300000000000000000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC......................................................................................2221.5030002000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.......................................................................................2121.5030001000000000000000000000000000000000000000000000000000000200000000000000000000
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC........................................................................................2231.3340002000000000000000000000000000000000000000000001000000000000000000100000000000
droMoj3
CATTAT-------T----------------------------TTT-----CGCCAATTGCCAAATATAAAGTGAAACATGAGCACAGTATTCG---CAGACATATAT---CCAGAGAG---ATTGCGTTTAACCGCAGGGAACTGCTGCTGCTGATATACTAT-----AT----GTATT-TGT-------------------CAGTACTCTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAAATAGCCAACAATTTGTC---TGTGA-----------------------AATAAATCTTGAATAGTG---TTATCTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................223175659.67526979301005269462
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................21371420.67214262141002142425
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC.......................................................................................2339565.33286966000286900
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................2035461.67163853000163802
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC........................................................................................2234979.00149371000149360
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.........................................................................................2131153.673461000034610
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC......................................................................................243749.332248000022480
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG.......................................................................................232623.501247100012442
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..........................................................................................203612.001836000018360
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT........................................................................................213393.671181200011790
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT...........................................................................................193276.6783001008281
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA.......................................................................................233230.3369100006910
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG......................................................................................221142.0014200001420
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.........................................................................................203132.3339710003960
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG.......................................................................................22295.5019100001910
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT........................................................................................20389.6726900002690
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA........................................................................................22389.6726900002690
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG......................................................................................23186.00860000860
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT.....................................................................................23180.00800000800
........................................................................................................................................AGGGAACTGCTGCTGCTGATATA...................................................................................................................................................................23175.007501700580
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC.......................................................................................23368.6720600002060
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT........................................................................................19365.3319600001960
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC.....................................................................................25353.6716100001610
........................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT........................................................................................18347.6714300001430
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.........................................................................................21346.6714000001400
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG......................................................................................24141.00410000410
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC......................................................................................24234.50690000690
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..........................................................................................21331.33940000940
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.........................................................................................19331.33940000940
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGC.....................................................................................23130.00300000300
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG........................................................................................22328.67860000860
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.........................................................................................18328.33850000850
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCT............................................................................................18326.33790000790
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTT....................................................................................24126.00260000260
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC.......................................................................................22316.00480000480
........................................................................................................................................AGGGAACTGCTGCTGCTGATAT....................................................................................................................................................................22115.00150401100
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC...........................................................................................19314.67440000440
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTC....................................................................................24112.00120000120
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..........................................................................................19311.00330000330
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG.......................................................................................21210.50210000210
...................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.........................................................................................22310.00300000300
.......................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTC.......................................................................................2039.33280000280
......................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC......................................................................................2229.00180000180
........................................................................................................................................AGGGAACTGCTGCTGCTGATA.....................................................................................................................................................................2118.008010070
.....................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC........................................................................................2137.33220000220
droGri2
CAAAATGA-G---T-AA-----------TGTT---A----TC----------------------------------------------AACCG---CTGCATAAATTCACCAATGCTAT-------GTTTAACCACAGGGAACTGCTGCTGCTGATATACAAC-----CA-----TATT-T--------------ATA----CACG--ACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATT-TGCAACGATTTGTCAGTGTT-T-----------------------TA---TTCT------ATT---TTATTTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT........................................................................................2262.5015105
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.........................................................................................2161.831129
....................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..........................................................................................2060.33202

Generated: 10/20/2015 at 10:29 PM