ID:

dsi-mir-315

 Coordinate:

3l:18475683-18475766 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

utr5 [utr5_plus_8593]

No Repeatable elements found

Sense Strand Reads

TAAGCCTTTGGCTAAGTTTGGCTGTTTTTATATAAGAGTTCCTTCACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTGTTTACCAGTTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCTCTCATCGCTGAAGATTTTACTGCATTTCGTTTTGGTAAGTTAAGA

**********************************************.((((((((((....(((((((((((((((.(((((((...((((.....)))).))))))))))))))))))))))....))))))).)))..******************************************** 		Read size # Mismatch Hit Count Total Norm Total M025

embryo

 M023

head

 GSM343915

embryo

 SRR553487

NRT_0-2 hours eggs

 SRR553488

RT_0-2 hours eggs

 SRR553485

Chicharo_3 day-old ovaries

 O002

Head

 M024

male body		 SRR553486

Makindu_3 day-old ovaries

 M053

female body

 SRR1275483

Male prepupae		 SRR618934

dsim w501 ovaries

 O001

Testis

 SRR1275487

Male larvae		 SRR902008

ovaries

 SRR902009

testis

 SRR1275485

Male prepupae
.............................................................TTTTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 0 1 479570.00 479570 284447 180667 8652 2095 1826 864 40 743 81 83 35 23 0 11 1 1 1
.............................................................TTTTGATTGTTGCTCAGAAAGC..................................................................................................... 22 0 1 59709.00 59709 23672 31932 2182 834 477 348 24 134 41 16 26 10 1 7 3 0 2
.............................................................TTTTGATTGTTGCTCAGAAAG...................................................................................................... 21 0 1 12280.00 12280 2530 8981 229 236 115 93 9 33 12 7 19 11 0 3 0 1 1
.............................................................TTTTGATTGTTGCTCAGAAAGCCT................................................................................................... 24 1 1 11972.00 11972 6314 5477 140 1 10 2 0 26 1 1 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGAC.................................................................................................... 23 1 1 3022.00 3022 1756 1242 7 4 6 1 0 6 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAA....................................................................................................... 20 0 1 1845.00 1845 175 1514 16 34 27 6 63 4 0 1 1 0 4 0 0 0 0
.............................................................TTTTGATTGTTTCTCAGAAAGCC.................................................................................................... 23 1 1 1426.00 1426 950 447 26 0 2 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCC................................................................................................... 24 0 1 1134.00 1134 587 398 3 0 1 1 135 1 0 0 0 0 8 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGA......................................................................................................... 18 0 1 1064.00 1064 42 973 2 6 3 1 31 5 1 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCCTCAGAAAGCC.................................................................................................... 23 1 1 1008.00 1008 716 284 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAAGCC.................................................................................................... 23 1 1 953.00 953 586 353 6 4 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCA................................................................................................... 24 1 1 907.00 907 233 222 22 137 20 229 0 0 28 3 0 12 0 0 1 0 0
.......................................................................................................CTTTCGAGCAATAATTGAAACC........................................................... 22 0 1 851.00 851 205 232 13 0 0 0 386 0 0 2 0 1 12 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCA.................................................................................................... 23 1 1 828.00 828 297 433 26 26 10 33 0 1 2 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 767.00 767 451 285 20 2 2 1 0 5 0 1 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGGCC.................................................................................................... 23 1 1 737.00 737 428 294 10 0 1 0 0 3 0 0 0 0 0 0 0 1 0
.............................................................TTTTGATTGTTGCTCAGAAAGCT.................................................................................................... 23 1 1 656.00 656 129 503 20 1 2 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCCCAGAAAGCC.................................................................................................... 23 1 1 626.00 626 367 241 16 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAA........................................................................................................ 19 0 1 570.00 570 29 488 2 15 6 0 25 2 1 1 0 0 1 0 0 0 0
.............................................................TTTTGATTGCTGCTCAGAAAGCC.................................................................................................... 23 1 1 552.00 552 313 215 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTACTCAGAAAGCC.................................................................................................... 23 1 1 476.00 476 383 85 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAA...................................................................................................... 21 1 1 420.00 420 11 403 0 0 0 1 0 3 1 0 0 0 0 0 1 0 0
..............................................................TTTGATTGTTGCTCAGAAAGCC.................................................................................................... 22 0 1 405.00 405 232 147 11 1 2 0 0 0 0 12 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCG................................................................................................... 24 1 1 354.00 354 217 136 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGGTTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 265.00 265 190 63 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGGTGCTCAGAAAGCC.................................................................................................... 23 1 1 260.00 260 100 143 14 0 1 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGGAAGCC.................................................................................................... 23 1 1 244.00 244 130 85 26 1 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCATAAAGCC.................................................................................................... 23 1 1 236.00 236 104 80 47 0 4 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCGGAAAGCC.................................................................................................... 23 1 1 230.00 230 132 87 9 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAGAGCC.................................................................................................... 23 1 1 220.00 220 128 81 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAGCC..................................................................................................... 22 3 4 207.00 828 522 293 0 10 2 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTCTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 198.00 198 121 73 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................TTTTATTGTTGCTCAGAAAGCC.................................................................................................... 22 1 1 191.00 191 113 73 0 2 2 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGA..................................................................................................... 22 1 1 186.00 186 15 146 4 5 2 11 0 0 1 0 0 2 0 0 0 0 0
...............................................................TTGATTGTTGCTCAGAAAGCC.................................................................................................... 21 0 1 174.00 174 78 94 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................CTTTCGAGCAATAATTGA............................................................... 18 0 1 167.00 167 0 1 0 0 0 1 161 0 0 0 0 0 4 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGTC.................................................................................................... 23 1 1 165.00 165 73 55 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTTAGAAAGCC.................................................................................................... 23 1 1 162.00 162 86 66 9 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTTATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 161.00 161 84 75 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCACAAAGCC.................................................................................................... 23 1 1 149.00 149 79 55 12 1 0 0 0 1 1 0 0 0 0 0 0 0 0
.......................................................................................................CTTTCGAGCAATAATTGAA.............................................................. 19 0 1 141.00 141 0 0 0 0 0 0 137 0 0 0 0 0 4 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGG......................................................................................................... 18 1 1 140.00 140 4 136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAACC.................................................................................................... 23 1 1 139.00 139 79 48 10 0 0 0 0 0 0 0 0 0 0 2 0 0 0
.............................................................TCTTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 135.00 135 61 62 8 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATCGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 135.00 135 78 52 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTCATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 130.00 130 85 44 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGATCAGAAAGCC.................................................................................................... 23 1 1 129.00 129 78 26 24 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGTTCAGAAAGCC.................................................................................................... 23 1 1 129.00 129 72 37 17 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTCGCTCAGAAAGCC.................................................................................................... 23 1 1 128.00 128 81 38 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGGTCAGAAAGCC.................................................................................................... 23 1 1 124.00 124 91 28 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTTTTGCTCAGAAAGCC.................................................................................................... 23 1 1 124.00 124 73 42 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTATTGCTCAGAAAGCC.................................................................................................... 23 1 1 119.00 119 66 48 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTCGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 115.00 115 60 38 14 1 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAAGC..................................................................................................... 22 1 1 102.00 102 32 66 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGACTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 99.00 99 51 39 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 98.00 98 48 42 5 2 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAATCC.................................................................................................... 23 1 1 95.00 95 41 32 19 1 0 0 0 0 0 1 1 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGGC..................................................................................................... 22 1 1 95.00 95 35 46 3 0 0 0 0 0 9 0 0 0 0 0 0 2 0
.............................................................TTTTGATTGTTGCTCAGAAACCC.................................................................................................... 23 1 1 85.00 85 48 32 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTGATTGTTGCTCAGAAAGC..................................................................................................... 21 0 1 84.00 84 24 56 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0
.............................................................TTTTGATTGTTTCTCAGAAAGC..................................................................................................... 22 1 1 82.00 82 42 31 7 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CTTTTGATTGTTGCTCAGAAAGCC.................................................................................................... 24 1 1 81.00 81 52 25 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCG.................................................................................................... 23 1 1 78.00 78 34 40 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGCTTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 76.00 76 61 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTAAGAAAGCC.................................................................................................... 23 1 1 76.00 76 38 24 8 2 3 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGT..................................................................................................... 22 1 1 75.00 75 5 59 9 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCCCAGAAAGC..................................................................................................... 22 1 1 75.00 75 31 38 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGCTGCTCAGAAAGC..................................................................................................... 22 1 1 75.00 75 32 34 7 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGATGCTCAGAAAGCC.................................................................................................... 23 1 1 73.00 73 46 25 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCCGAAAGCC.................................................................................................... 23 1 1 71.00 71 15 10 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTAATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 70.00 70 32 31 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TGATTGTTGCTCAGAAAGCC.................................................................................................... 20 0 1 69.00 69 43 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTTATTGTTGCTCAGAAAGCC.................................................................................................... 21 1 1 65.00 65 33 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGCC..................................................................................................... 22 2 1 64.00 64 23 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTTTCGAGCAATAATTGAAA............................................................. 20 0 1 64.00 64 0 0 0 0 0 0 62 0 0 0 0 0 2 0 0 0 0
.............................................................ATTTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 59.00 59 32 20 2 0 0 1 0 4 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCCTCAGAAAGC..................................................................................................... 22 1 1 59.00 59 38 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAACGCC.................................................................................................... 23 1 1 58.00 58 30 10 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGGCG.................................................................................................... 23 2 1 57.00 57 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGCAAGCC.................................................................................................... 23 1 1 54.00 54 4 4 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGTTTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 53.00 53 40 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GTTTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 51.00 51 28 18 2 0 0 0 0 2 1 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCATAAAGC..................................................................................................... 22 1 1 50.00 50 20 25 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTACTCAGAAAGC..................................................................................................... 22 1 1 48.00 48 27 16 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGT......................................................................................................... 18 1 2 44.00 88 0 86 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGGTGCTCAGAAAGC..................................................................................................... 22 1 1 43.00 43 9 28 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAT....................................................................................................... 20 1 1 42.00 42 0 41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCACAAAGC..................................................................................................... 22 1 1 40.00 40 21 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTCTTGCTCAGAAAGCC.................................................................................................... 23 1 1 40.00 40 23 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGGAAGC..................................................................................................... 22 1 1 38.00 38 14 18 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAC...................................................................................................... 21 1 1 38.00 38 6 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGGC.................................................................................................... 23 1 1 36.00 36 14 5 15 0 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................ATTGTTGCTCAGAAAGCC.................................................................................................... 18 0 1 35.00 35 23 11 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................TTGATTGTTGCTCAGAAAGC..................................................................................................... 20 0 1 33.00 33 14 17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTTATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 33.00 33 9 23 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCAA.................................................................................................. 25 2 1 31.00 31 0 0 0 15 1 13 0 0 2 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGACAGCC.................................................................................................... 23 1 1 31.00 31 3 3 24 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGAGTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 31.00 31 7 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTGAGAAAGCC.................................................................................................... 23 1 1 31.00 31 19 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGGTTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 30.00 30 17 9 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCTGAAAGCC.................................................................................................... 23 1 1 29.00 29 10 7 11 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGAATGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 29.00 29 15 13 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAGAGC..................................................................................................... 22 1 1 28.00 28 10 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGG..................................................................................................... 22 1 1 28.00 28 3 17 5 1 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAGC...................................................................................................... 21 3 15 26.93 404 195 201 0 7 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTTCTCAGAAAG...................................................................................................... 21 1 1 26.00 26 8 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTTAGAAAGC..................................................................................................... 22 1 1 26.00 26 9 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGTTCAGAAAGC..................................................................................................... 22 1 1 26.00 26 9 11 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGTTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 25.00 25 5 4 13 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCGCAGAAAGCC.................................................................................................... 23 1 1 25.00 25 8 11 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAAC..................................................................................................... 22 1 1 24.00 24 10 7 5 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTGGCTCAGAAAGCC.................................................................................................... 23 1 1 24.00 24 15 6 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGATCAGAAAGC..................................................................................................... 22 1 1 24.00 24 11 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTCGCTCAGAAAGC..................................................................................................... 22 1 1 23.00 23 10 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCGGAAAGC..................................................................................................... 22 1 1 22.00 22 6 14 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATCGTTGCTCAGAAAGC..................................................................................................... 22 1 1 21.00 21 7 9 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTAGCTCAGAAAGCC.................................................................................................... 23 1 1 21.00 21 11 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCCGAAAGC..................................................................................................... 22 1 1 20.00 20 0 3 16 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................TCTTGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 20.00 20 3 16 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTAGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 19.00 19 10 8 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTGGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 19.00 19 5 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTGTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 19.00 19 1 1 16 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGGTCAGAAAGC..................................................................................................... 22 1 1 18.00 18 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................ATTTTGATTGTTGCTCAGAAAGCC.................................................................................................... 24 0 1 18.00 18 14 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCCCAGAAAGCCT................................................................................................... 24 2 1 18.00 18 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATGGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 18.00 18 10 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTATTGCTCAGAAAGC..................................................................................................... 22 1 1 17.00 17 7 6 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................TTTGATTGTTGCTCAGAAAG...................................................................................................... 20 0 1 17.00 17 1 14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCCTCAGAAAG...................................................................................................... 21 1 1 17.00 17 6 9 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCTT.................................................................................................. 25 1 1 17.00 17 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAGAAAG...................................................................................................... 21 1 1 17.00 17 5 11 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGTAAGCC.................................................................................................... 23 1 1 17.00 17 5 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCATAAAG...................................................................................................... 21 1 1 17.00 17 2 13 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAGAAAGCCT................................................................................................... 24 2 1 16.00 16 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATAGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 16.00 16 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGCTGCTCAGAAAGCCT................................................................................................... 24 2 1 16.00 16 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGG...................................................................................................... 21 1 2 15.50 31 6 7 2 0 0 0 0 0 14 0 0 0 0 0 0 2 0
.............................................................TTTTGATTGTTGCACAGAAAGCC.................................................................................................... 23 1 1 15.00 15 9 5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................TTTTGATTGTTGCTAAGAAAGC..................................................................................................... 22 1 1 15.00 15 3 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAATGCC.................................................................................................... 23 1 1 15.00 15 8 5 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................TTCATTGTTGCTCAGAAAGCC.................................................................................................... 21 1 1 15.00 15 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTTCTCAGAAAGCCT................................................................................................... 24 2 1 15.00 15 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAAG...................................................................................................... 21 1 1 15.00 15 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTAATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 15.00 15 5 6 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAT...................................................................................................... 21 1 1 14.00 14 0 13 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAT........................................................................................................ 19 1 1 14.00 14 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTCGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 14.00 14 0 12 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TATTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 13.00 13 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTTTTGCTCAGAAAGC..................................................................................................... 22 1 1 13.00 13 6 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAAGCCT................................................................................................... 24 2 1 13.00 13 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGGCCT................................................................................................... 24 2 1 13.00 13 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTCATTGTTGCTCAGAAAGCC.................................................................................................... 22 1 1 13.00 13 6 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................CTTTTGATTGTTGCTCAGAAAGC..................................................................................................... 23 1 1 13.00 13 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTGAGAAAGC..................................................................................................... 22 1 1 12.00 12 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCAA................................................................................................... 24 2 1 12.00 12 1 2 2 1 0 4 0 0 0 0 0 2 0 0 0 0 0
.............................................................TTCTGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 11.00 11 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGATGCTCAGAAAGC..................................................................................................... 22 1 1 11.00 11 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAACC..................................................................................................... 22 1 1 11.00 11 4 3 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCAAA................................................................................................. 26 3 1 11.00 11 0 0 0 5 1 5 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTTATTGTTGCTCAGAAAGCCT................................................................................................... 23 2 1 11.00 11 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GTTTGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 11.00 11 0 3 3 0 0 5 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTTATTGTTGCTCAGAAAG...................................................................................................... 20 1 1 11.00 11 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GATTGTTGCTCAGAAAGCC.................................................................................................... 19 0 1 11.00 11 4 4 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................TTTGATTGTTGCTCAGAAAGCCT................................................................................................... 23 1 1 10.00 10 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTTATTGTTGCTCAGAAAGC..................................................................................................... 21 1 1 10.00 10 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGCAAGC..................................................................................................... 22 1 1 10.00 10 1 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTTTCGAGCAATAATTGAAAC............................................................ 21 0 1 10.00 10 0 2 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGC......................................................................................................... 18 1 1 10.00 10 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTAGCTCAGAAGGCT.................................................................................................... 23 3 1 10.00 10 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGAA.................................................................................................... 23 2 1 10.00 10 4 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTACTCAGAAAG...................................................................................................... 21 1 1 9.00 9 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGACTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 9.00 9 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGGTGCTCAGAAAGCCT................................................................................................... 24 2 1 9.00 9 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGATAGCC.................................................................................................... 23 1 1 9.00 9 2 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCCTCAGAAAGCCT................................................................................................... 24 2 1 9.00 9 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGGCGT................................................................................................... 24 3 1 9.00 9 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCACAAAGCCT................................................................................................... 24 2 1 9.00 9 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAG....................................................................................................... 20 2 4 8.75 35 12 22 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTATGATTGTTGCTCAGAAAGCC.................................................................................................... 23 1 1 8.00 8 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGTTTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 8.00 8 5 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGGTGCTCAGAAAG...................................................................................................... 21 1 1 8.00 8 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTACTCAGAAAGCCT................................................................................................... 24 2 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................ATTTGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 8.00 8 4 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAATC..................................................................................................... 22 1 1 8.00 8 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTTATTGTTGCTCAGAAAGCCT................................................................................................... 24 2 1 8.00 8 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGCTTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 8.00 8 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTTCTCAGAAAGAC.................................................................................................... 23 2 1 8.00 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTTAGAAAG...................................................................................................... 21 1 1 8.00 8 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGATT....................................................................................................... 20 2 2 7.50 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTATTGTTGCTCAGAAAGCC.................................................................................................... 20 1 1 7.00 7 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAG.......................................................................................................... 17 0 1 7.00 7 0 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 0
.............................................................TTTTGAGTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 7.00 7 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCACAAAG...................................................................................................... 21 1 1 7.00 7 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGACAGC..................................................................................................... 22 1 1 7.00 7 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGGTTGTTGCTCAGAAAGCCT................................................................................................... 24 2 1 7.00 7 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCATAAAGCCT................................................................................................... 24 2 1 7.00 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CTTTTGATTGTTGCTCAGAAAG...................................................................................................... 22 1 1 7.00 7 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGGTCAGAAAGCCT................................................................................................... 24 2 1 7.00 7 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCAAA.................................................................................................. 25 3 1 7.00 7 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTGATTGTTTCTCAGAAAGCC.................................................................................................... 22 1 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAATCCT................................................................................................... 24 2 1 6.00 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAC....................................................................................................... 20 1 1 6.00 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGACT....................................................................................................... 20 2 2 6.00 12 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TCTTTTGATTGTTGCTCAGAAAGCC.................................................................................................... 25 2 1 6.00 6 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGATCAGAAAGAC.................................................................................................... 23 2 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTCGATTGTTGCTCAGAAAGCCT................................................................................................... 24 2 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAG....................................................................................................... 20 1 2 6.00 12 0 5 0 1 0 0 0 0 6 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGGAAG...................................................................................................... 21 1 1 6.00 6 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAACGC..................................................................................................... 22 1 1 6.00 6 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAGAGCCT................................................................................................... 24 2 1 6.00 6 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCCTCAGAAAGAC.................................................................................................... 23 2 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAGAAAGAC.................................................................................................... 23 2 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTCATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 6.00 6 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTCTGATTGTTGCTCAGAAAGCCT................................................................................................... 24 2 1 6.00 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGCTGCTCAGAAAG...................................................................................................... 21 1 1 6.00 6 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCCCAGAAAG...................................................................................................... 21 1 2 5.50 11 4 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CTTATTGTTTACCAGTTGG................................................................................. 19 0 1 5.00 5 2 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGATTGTTGCTCAGAAAGCCT................................................................................................... 22 1 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTCGCTCAGAAAGCCT................................................................................................... 24 2 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAGAAAGCA.................................................................................................... 23 2 1 5.00 5 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTTTTGCTCAGAAAG...................................................................................................... 21 1 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTTAGAAAGCCT................................................................................................... 24 2 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGGTCAGAAAG...................................................................................................... 21 1 1 5.00 5 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCCGAAAG...................................................................................................... 21 1 1 5.00 5 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTGATTGTTGCTCAGAAAGCCC................................................................................................... 23 0 1 5.00 5 1 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTCTTGCTCAGAAAGC..................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAACCCT................................................................................................... 24 2 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGTTA....................................................................................................... 20 2 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGGAAGCCT................................................................................................... 24 2 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCGGAAAG...................................................................................................... 21 1 1 5.00 5 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGATTGTTGCTCAGAAAG...................................................................................................... 19 0 1 5.00 5 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCACAGAAAGC..................................................................................................... 22 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TCTTGATTGTTGCTCAGAAAG...................................................................................................... 21 1 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCCT.................................................................................................. 25 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGTAAGC..................................................................................................... 22 1 1 5.00 5 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAATT...................................................................................................... 21 2 2 4.50 9 0 8 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGCTGCTCAGAAAGCA.................................................................................................... 23 2 1 4.00 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTCATTGTTGCTCAGAAAGCCT................................................................................................... 24 2 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGGTTGTTGCTCAGAAAG...................................................................................................... 21 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGGTGCTCAGAAAGAC.................................................................................................... 23 2 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCTT................................................................................................... 24 2 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTTATTGTTGCTCAGAAAGC..................................................................................................... 20 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGGTGCTCAGAAAGTC.................................................................................................... 23 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAGAAA....................................................................................................... 20 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTATTGCTCAGAAAGCCT................................................................................................... 24 2 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTAAGAAAGTC.................................................................................................... 23 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTGGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 4.00 4 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCCTCAAAAAGCC.................................................................................................... 23 2 1 4.00 4 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGGTGAGTGTTGCTCAGAAAGCC.................................................................................................... 23 3 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGATCAGAAAG...................................................................................................... 21 1 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAA....................................................................................................... 20 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATCGTTGCTCAGAAAG...................................................................................................... 21 1 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGGGTGTTGCTCAGAAAGCC.................................................................................................... 23 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCCTCAGAAAGCA.................................................................................................... 23 2 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGAATGTTGCTCAGAAAGC..................................................................................................... 22 1 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGGTGATTGTTGCTCAGAAAGCC.................................................................................................... 23 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TTTTTGATTGTTGCTCAGAAAGCC.................................................................................................... 24 1 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGCTGCTCAGAAAGAC.................................................................................................... 23 2 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTTTCGAGCAATAATT................................................................. 16 0 1 4.00 4 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTTATTGTTGCTCAGAAAGCCT................................................................................................... 22 2 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCTGAAAGGC.................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTTTCGAGCAATAATTGAAACCA.......................................................... 23 0 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGATCAGAAAGCCT................................................................................................... 24 2 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGATC....................................................................................................... 20 2 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCAT................................................................................................... 24 2 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTTCATTGTTGCTCAGAAAGCCT................................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGCTGCTCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................ATTTGATTGTTGCTCAGAAAG...................................................................................................... 21 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCATAAAGT..................................................................................................... 22 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGGTTGTTGCTCAGAAAGAC.................................................................................................... 23 2 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTGTGATTGTTGCTCAGAAAGC..................................................................................................... 22 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGCTTCTCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAACCCC................................................................................................... 24 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGTTGAGTGTTGCTCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTTCTCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTTTTGCTCAGAAAGCCT................................................................................................... 24 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTTCTCAGAAAGCA.................................................................................................... 23 2 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGTGGATTGTTGCTCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TGATTGTTGCTCAGAAAGC..................................................................................................... 19 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAAGCC................................................................................................... 24 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGGTTGTTTCTCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGATCATAAAGCC.................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGACTGTTGCTCAGAAAG...................................................................................................... 21 1 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAAAAGCCC.................................................................................................... 23 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTGTTGCTCAGAAAGCCT................................................................................................... 18 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAGAGAC.................................................................................................... 23 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTCTGATTGTTGCTCAGAAAG...................................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCATAAAGA..................................................................................................... 22 2 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TGATTGTTGCTCAGAAAGCCT................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTCATCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGCACGCC.................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAAGCCAAAA................................................................................................ 27 3 1 3.00 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATGGTTGCTCAGAAAGC..................................................................................................... 22 1 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGTTGATTGTTGATCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCCTAAAGCC.................................................................................................... 23 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGTTCAGAAAG...................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGTTCAGAAAGCT.................................................................................................... 23 2 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTAAGAAAG...................................................................................................... 21 1 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTGCTCAAAAAGCC.................................................................................................... 23 2 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTTTGATTGTTACTCAGAAAGCC.................................................................................................... 23 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTTGATTGTTGCTCAGAAGAC..................................................................................................... 22 2 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATTCGGAAACCGATTCAAACCGACAAAAATATATTCTCAAGGAAGTGCCTGTGAATATATTAAAACTAACAACGAGTCTTTCGGGAATAACAAATGGTCAACCGAAAGCTCGTTATTAACTTTGGTCTATTCACTAGGAGAGTAGCGACTTCTAAAATGACGTAAAGCAAAACCATTCAATTCT

********************************************.((((((((((....(((((((((((((((.(((((((...((((.....)))).))))))))))))))))))))))....))))))).)))..********************************************** 		Read size # Mismatch Hit Count Total Norm Total M025

embryo

 M023

head

 SRR553486

Makindu_3 day-old ovaries

 SRR553487

NRT_0-2 hours eggs

 SRR553485

Chicharo_3 day-old ovaries
.....................................................................................................CCGAAAACTCGTTGTTAATTTT............................................................. 22 3 5 0.20 1 1 0 0 0 0
......................................................................................................CGAAAGCTCGTTGTTAGTTTT............................................................. 21 3 7 0.14 1 0 1 0 0 0
...........................................................................................................................GGTCTTTTCACTAAGTGAGT......................................... 20 3 10 0.10 1 0 0 1 0 0
.......................................................................................................GAAAGCTCGTTGTTAGTTTT............................................................. 20 3 20 0.10 2 0 1 0 0 1
.......................................................................................................GAAAGCTCGTGATTA.................................................................. 15 1 13 0.08 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 3l:18475633-18475816 + dsi-mir-315 Known_mirbase T--AA--GCCTTTGGCTAA-G------T---------------------------------TT-GGCTGTTTTTATATAAGAGT-TC-----CTT--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTG---TTTACCAGTTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCTCTCATCGCTGA---AGA----TTTTACTGCATTTC-----GTTTTGGTAAGTT------AAGA
droSec2 scaffold_19:820193-820373 + dse-mir-315 Known_mirbase T--AA--GCCTTTGGCTAA-G------T---------------------------------TT-GGCT-GTTTTATATAAGAGT-TC-----CTT--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTG-----TACCAGTTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCCCTCATCGCTGA---AGA----TTTGAAAGCACTTC-----GTTTTGGTAAGTT------AAGA
dm3 chr3L:18854022-18854204 + dme-mir-315 Known_mirbase T--AA--GCCATTGGCTAA-G------T---------------------------------TT-GGCT-GTTTTATATAAGAGT-TC-----CTT--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTCATTG---TTTACCAGTTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCCCTCAACGCTGA---CGA----TTTCAAAGCACTTC-----GTTTTGGTAAGTT------AAGA
droEre2 scaffold_4784:18670561-18670742 + der-mir-315 Known_mirbase T--AA--CCCTTTGGCTAA-G------T---------------------------------TT-GGTT-GTTTTATATAAGAGT-TC-----CTA--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCT-ATTA---TCTAACAGCTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCTTACAACGCTGA---AGA----TTTGACTGCATTTC-----GTGTTGGTAAGTA------AACA
droYak3 v2_chr3L_random_055:2848-3029 + dya-mir-315-2 Known_mirbase T--AA--CCCTTTGGCTAA-G------T---------------------------------TT-GGTT-TTTTTATATAAGAGT-TC-----C-G--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTACTA---TTTAACAGCTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCTTACAACATTGA---AGA----TTTGACTGCGTTTC-----GTGTTGGTAAGTA------AAAA
droEug1 scf7180000409471:636117-636300 - TTTAC--CCTTTTGGCTAA-G------T---------------------------------TTT--T-GGTTTTATATAAGAGC-TC-----CAA--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTA---TTTAACAGTCGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCCTACAACGTTTG---TGA----TTTAAATACATTCT-----GTGATGGTAAGTG------AGCT
droBia1 scf7180000302529:650372-650549 - T--AC--CCTTTTGGCTAA-G------T---------------------------------TTCGG-----CTTATATAAGAGC-TC-----CTC--A-----GCGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTA---TTTAACAGTTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACGTTTG---TTA----TGCCATCGCGTCTC-----GAGTTGGTAAGTG--------CA
droTak1 scf7180000415184:198548-198730 - T--AA--CCTTTTGGCTAA-G------T---------------------------------TT-GGTT-ACTTTATATAAGAGC-TC-----CTG--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTA---CTTAACAGTTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACGATTG---TTA----GTTAATTGCGTCTT-----AAGATGGTAAGTA------CACA
droEle1 scf7180000490993:1762423-1762606 + T--AA--CCCTTTGGCTAA-G------T---------------------------------TT-GGTT-GTTTTATATAAGAGT-TC-----CTGG-A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTACTA---TTTAACAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTCACAACGAATG---TGA----TTTAATTAGACTTC-----AAAATGGTAAGTG------AACA
droRho1 scf7180000758207:1436-1611 + T--TA--CCTTTTGGCTAA-G------T---------------------------------TT-GGTT-GTTTTATATAAGAGT-TT-----CTG--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTAATA---TTT-ACAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTTACAACGTTTT--GTGA----TTTAAA-------C-----GAGATGGTAAGTG------AACA
droFic1 scf7180000453824:210567-210749 + T--AA--CCCTTTGGCTAAAG------T---------------------------------TT-GGTT-CTTTTATATAAGAGC-TC-----CTG--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTCATTA---CTTAACAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTTACAACGAAAGTGAA------TTTTGATAC--TCT-----TATATGGTAAGTG------AACA
droKik1 scf7180000302248:117478-117666 - C--AA--TCCTTTGGCTAA-A------T---------------------------------TTT--T-GGTTTTATATAAGAGT-TC-----CTGGAA-----ATGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTT--TA---TTTATCAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACGTTAT-GAAGTGTGATTTAGT-----TGT-----TAAAGGGTAAGTGTTTTCTAAAA
droAna3 scaffold_13337:18585433-18585621 - dan-mir-315 Known_mirbase A--ATA-ATCTTTGGCTGT-A--ATAGT---------------------------------TT-GGCT-TTTTTATATAAGAGC-TC-----CTA--A-----ATGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATAA---ATTATTAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACATTTT--AAGT----GTGAAATATTCTTT-----TAAAGGGTGAGTA------AATA
droBip1 scf7180000396741:1773735-1773884 - T--AA--TC-TTTGGCTGA-A--ATTGG---------------------------------TT-GGCT-TTTTTATATAAGAGA-TC-----CTA--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATAT---ATTTAAAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTTACAACATT------------------------------------------------------
dp5 XR_group6:4103850-4103977 - dps-mir-315 Known_mirbase A--TT--TT-TTTGTGTGA-A------T---------------------------------TC------AATTGTGAA-----AGTA-----TAA--G-----CCGGACACTTATCTATTTTTGATTGTTGCTCAGAAAGCCCTTATAA---TTAACCAGTTGGCTTTCGAGCAATTATCAAAGCCAAATAAGTGATCC----------------------------------------------------------------
droPer2 scaffold_9:2393012-2393185 - dpe-mir-315 Known_mirbase A--TT--TT-TTTGTGTGA-A------T---------------------------------TC------CATTGTGAA-----AGTA-----TAA--A-----CCGGACACTTATCTATTTTTGATTGTTGCTCAGAAAGCCCTTATAA---TTAACCAGTTGGCTTTCGAGCAATTATCAAAGCCAAATAAGTGATCCCAACAACATTTT---AGT----GTGAAATACTTGAC-----TCAAAGGTAAGTG------AAAA
droWil2 scf2_1100000004768:104781-104943 + dwi-mir-315 Known_mirbase T--GG--TCCTTTAGC-AT-C------A-TCATTTGGTAAACTGAATGTTTGTGAATTGGTTT-GCTT-ATTT------------GC-----CCA--T-----CTGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTCATTA--CTTTATCAGTTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGAGCCTGTCA-----------------------------------------------------------
droVir3 scaffold_13049:18083544-18083722 - dvi-mir-315a Known_mirbase C--AA--ACATTTT-CCAA-GTTACAACT--------------------------------CC-ATTT-CCTTCCTAC-----CTCA-----CAA--A-----ACGGACGCCTATATCATTTTGATTGTTGCTCAGAAAGCCCTG--CA---TTCAATACTTGGCTTTCGAGTAATAATCGAAACCAAATAAGCGATCCTAACTACGTTTA----------CCTA-ATATTATTATCATGGTCCAGGTAAGT-----------
droMoj3 scaffold_6680:23648541-23648676 - dmo-mir-315 Known_mirbase T--AATAACCGTCAGCC-----------------------------------------------------------------------------A--A-----ACGGACCCTTATATAATTTTGATTGTTGCTCAGAAAGCCCGTAATTTAACTTA--ACATGGCTTTCGAGTAATAATCGAAACCAAATAAGGCATCCAAACATCATTTT----------GTCAAAAATTT-----------------------------CA
droGri2 scaffold_15110:24135494-24135638 - dgr-mir-315 Known_mirbase T--ATA-ATTTATGGTTA------CTAGT--------------------------------GT-GTTC-TCCTGATGC-----CTGAAACAGCCA--ACTACTATGGACGCTCATATAATTTTGATTGTTGCTCAGAAAGCCTTT--CA---CTTGACACTTGGCTTTCGAGTAATAATCGAAACCAAATAAGCGATCCT---------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T--AA--GCCTTTGGCTAA-G------T---------------------------------TT-GGCTGTTTTTATATAAGAGT-TC-----CTT--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTG---TTTACCAGTTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCTCTCATCGCTGA---AGA----TTTTACTGCATTTC-----GTTTTGGTAAGTT------AAGASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................231479570.004795701806677432844478304086481209518262386521111135
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................22159709.005970931932134236721612434841834477102182307226
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................21112280.00122808981332530709931223611511229013119
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................24111972.0011972547726631410021110014000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................2011845.00184515144175146360342701600001
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................2411134.00113439815870813510010300000
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................1811064.001064973542003111630200000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241907.0090722202333002292813720122210000
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACC.............................................................................221851.008512320205212386000011300000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231828.008284331297000332261002600000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231656.006565031129000001202000000
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................191570.005704882291125011560200000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................211420.0042040331100011000010000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................221405.0040514702321200001201100000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCG........................................................................................................................241354.00354136021700010000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................221186.00186146015000111522400000
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................211174.001749407810000100000000
....................................................................................................................................................................CTTTCGAGCAATAATTGA.................................................................................181167.001671000416110000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGAA................................................................................191141.001410000413700000000000
.......................................................................................................................TTTTGATTGTTGCTCAGG..............................................................................................................................181140.001401360400000000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21184.00845602400100010100001
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................23178.00784003400000100300000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22175.0075590500010100900000
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................20169.00692604300000000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGAAA...............................................................................20164.0064000026200000000000
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................18244.0088862000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAT............................................................................................................................20142.0042411000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................21138.0038320600000000000000
............................................................................................................................ATTGTTGCTCAGAAAGCC.........................................................................................................................18135.00351102300000001000000
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................20133.00331701400000100100000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCAA.......................................................................................................................25131.00310000001321510000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................22128.0028172300000100500000
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................24118.0018211400000010000000
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................20117.0017140100000010100000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................21114.0014130000010000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAT.............................................................................................................................19114.0014130100000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAA........................................................................................................................24112.001220100040102200000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCAAA......................................................................................................................26111.001100000050510000000
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................19111.001140400000011100000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCT........................................................................................................................23110.001060400000000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGAAAC..............................................................................21110.001020000800000000000
.......................................................................................................................TTTTGATTGTTGCTCAGC..............................................................................................................................18110.0010100000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGAA.........................................................................................................................23110.001020400000210100000
.......................................................................................................................TTTTGATTGTTGCTCAGATT............................................................................................................................2027.5015150000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAG...............................................................................................................................1717.00700000010120000102
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAAA.......................................................................................................................2517.00700000010600000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAC............................................................................................................................2016.00660000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGACT............................................................................................................................2026.0012120000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAG............................................................................................................................2026.001250000006100000000
..............................................................................................................................................CTTATTG---TTTACCAGTTGG...................................................................................................1915.00500200000010200000
.........................................................................................................................TTGATTGTTGCTCAGAAAGCCT........................................................................................................................2215.00530200000000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCC........................................................................................................................2315.00530100100000000000
.........................................................................................................................TTGATTGTTGCTCAGAAAG...........................................................................................................................1915.00540000000000100000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCCT.......................................................................................................................2515.00510400000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAATT...........................................................................................................................2124.50980000001000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCTT........................................................................................................................2414.00430100000000000000
....................................................................................................................................................................CTTTCGAGCAATAATT...................................................................................1614.00400000000220000000
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACCA............................................................................2313.00300000300000000000
.......................................................................................................................TTTTGATTGTTGCTCAGATC............................................................................................................................2013.00330000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAT........................................................................................................................2413.00310200000000000000
..........................................................................................................................TGATTGTTGCTCAGAAAGC..........................................................................................................................1913.00300200000010000000
.............................................................................................................................TTGTTGCTCAGAAAGCCT........................................................................................................................1813.00300300000000000000
..........................................................................................................................TGATTGTTGCTCAGAAAGCCT........................................................................................................................2113.00310200000000000000
droSec2
T--AA--GCCTTTGGCTAA-G------T---------------------------------TT-GGCT-GTTTTATATAAGAGT-TC-----CTT--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTG-----TACCAGTTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCCCTCATCGCTGA---AGA----TTTGAAAGCACTTC-----GTTTTGGTAAGTT------AAGASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................23153466.00534661131833837514795
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................22113083.0013083337572855690
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2113628.00362895810532508
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................241907.0090725634266
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................221334.0033410228735
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231290.002903166220
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................201262.002625037220
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241167.001670110957
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACC.............................................................................221165.001651428663
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................221164.001640315146
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231137.00137037163
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................191118.001181010107
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................181115.001150014101
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21185.0085207211
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22161.0061021247
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................21145.004500378
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................24137.0037012313
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................20116.001610123
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................21115.001511112
.......................................................................................................................TTTTGATTGTTGCTCAGAAGC...........................................................................................................................21210.502100192
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................20110.00101072
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGAA.........................................................................................................................2318.0080035
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................2317.0070025
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2417.0070061
.....................................................................................................................................................................TTTCGAGCAATAATTGAAACC.............................................................................2117.0070133
.....................................................................................................................AATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2515.0050032
........................................................................................................................TTTGATTGTTGCTCAGAAA............................................................................................................................1914.0040031
.......................................................................................................................TTTTGATTGTTGCTCAGAAT............................................................................................................................2014.0040004
.........................................................................................................................TTGATTGTTGCTCAGAAAG...........................................................................................................................1914.0040031
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCTT........................................................................................................................2414.0040013
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAA........................................................................................................................2413.0030003
.......................................................................................................................TTTTGATTGTTGCTCAGAT.............................................................................................................................1913.0030003
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................1913.0030030
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2313.0030030
....................................................................................................................................................................CTTTCGAGCAATAATTGAAAC..............................................................................2113.0030021
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................1822.5050005
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................2112.0020002
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAT........................................................................................................................2412.0020002
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCG........................................................................................................................2412.0020011
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACCA............................................................................2312.0021010
............................................................................................................................ATTGTTGCTCAGAAAGCC.........................................................................................................................1812.0020020
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................2112.0020002
........................................................................................................................TTTGATTGTTGCTCAGAA.............................................................................................................................1812.0021001
....................................................................................................................................................................CTTTCGAGCAATAATTGAA................................................................................1912.0020011
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................2212.0020020
.......................................................................................................................TTTTGATTGTTGCTCAGC..............................................................................................................................1811.0010001
dm3
T--AA--GCCATTGGCTAA-G------T---------------------------------TT-GGCT-GTTTTATATAAGAGT-TC-----CTT--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTCATTG---TTTACCAGTTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCCCTCAACGCTGA---CGA----TTTCAAAGCACTTC-----GTTTTGGTAAGTT------AAGASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................231106956.001069560000310002944131341003112140000205448431527638375800000010301200311210004110000000000000000086471672449346300131458570345722633631122957241201155524231461810143843165075377430488203727323535173120000000000531718117331100002000020110203000142517830147612155124593617379748155154726863080000024407316541100047179400000200000002002220281397362406210930000100548638952154175864122312115031806172893813438242636164616462118792442124010302483262402322764235145024393946969962851829612921518136342053075332609571956103282016371134255482157233299972334844420
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................22128689.00286890000120000144223010004000020116152931434461010000002000002010000000000000000000000000564280011180001061405626218924452350003000080715041214730112800152214852141232116715200000000001042211000010200002001050000053860805011893673803434217552101115110200010727115171000619300000000000000006102613321255042301000020057242604867135485502657735124175315912433114915335583521041330001226007110716521219140748336480266022001633138236070012934542018714212012893123210213230213418160
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................21115419.001541900001100004117201003200005011421526925330800010001000000000000000000000000000000000111181014000214150406511672025239000500013227000951422404219420888118810000000000206000000020000102300000003344090297341722831629324271689135000004023434000001402220000000000000000210114041347900092000000024719602536314781292217057290223103003250163242400112040302050189731338892130111980553203010320731171770802271441601447070014641492931666840
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACC.............................................................................2216674.0066740000400000060001100000001101525358813351350000000000000000000000101000000000000000004340911583300050324034441402491130001000031530002301102010416100000000006140000000100000000070400020136001943461675446411358264180369223191000135016100040530000000000000100020200220000100000000795201504002802010000000000010310000020000001000281104101110321019010000080440100017200030000013701100200010
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................2013528.003528000040000014000000000002000116153156004000000000000000000000100000000000000000000110100000000025117180100457800010000600001564140951105545862000000000030100000000000000040000000228268014711871878164122405321200000222213100030000000000000000000001101141000000010000181605511900523040100025000100041024000000000000110054835514011611000000162714100100610000001006500100000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCATC.......................................................................................................................2513075.00307500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002210865000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2411079.0010790000100023031000000000000000000000000000000010000000000000000000000000000000001000060000012109200014440001000113020011130110321003101000000000010100000003000000000000000670610962327125100000880200002080000000000000000002000022200000000000045440190170011163226000271000001001020000000000000000242719214306000000001104801010230401204010114334870621200
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231943.00943000011000301100000000000000000000000000000000000000000000000000000000000000000000001000000010101000021000000002000005901901343606045000000000000000000000000000000000000122001410131719022129100000321000000104000000000000000000000100330000000016800201501201800915070700136000010020100000100000000000248696167035530010007071200000015110002000010700000110000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241817.00817000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000600000011200000000101000330101150100200000000000020000000100000000000000095010088050801000000093140000401000000000000000000000000622400020000470022130190700470212000810000003000100000000000000002833343341332100110071126020001900011000005011200000100
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................221739.0073900001000000100000010000000000000000000000000000000000000000000000000000000000000000000000010000100000200000000000000200607723163270000000000000000000000000000000000001215013004190131261412000002520200000010000000000000000001020018000000000000420020000061404010002100000111000000000000000000017360576505410000002401110000000200000002008510300000000
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................191654.006540000000000000000000000010000000000000000000000000000000002000000000000000000100000000000000303800010126000100004000001100101000120121100000000000000000000000000002000000037390150092017036166000000301100000100000000000000000000000000130000000010005500110200380200000700000002000100000000000000003740466003101000004043000000000000000002900000001000
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................181578.005780000000000000000001000000001102401000000000000000000000000000000000000000000001000000000000300700011011000000003000013201001017168001100000000000000000000000000000000625010114402120015200000110000000000000000000000000000001000400000000000023022500001301020001510000003000000000000000010008670501100631100000503301000010000000000100000001000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231554.005540000000000030000001000000000000000000000000000000000000000000000000000000000000000010000000000000000050000000010100123050111603142000000000000100000000000000000000000711017004220240322020000071010000002000000000000000000000000500000000000026900151800313010300012000000010001000100000000000126232426164311000004258000001922000000007200100201010
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................221428.0042800000000010300000100000000012526261100000000000000000000000000000000000000000000000001100000000000000020000000001100014204076111304100000000000000000000000000002000000019200234115306282554300000300010000000000000000000000000010013000100000000117003010013000000020000000000000000000000000000128812151200000000000000000100000000001100000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGAAAC..............................................................................211400.00400000000000000000000000000000923214100000000000000000000000000000000000000000002210200020002011021000002100000000010000000000000000100000000000100000000000000000000000001510718905371213831118000000000000000000000000000001000001000000000010000054000000000000000000000300003100000000000000001759524001000001002000000600000000001100000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................241314.003140000000010010000000000000001001200000000000000000000000000000000000000000000000000013000000206100001010000000000100013000014021310000000000001000000000000000000000003103018201050110000001400000001000000000000000000000000005000000000000201201701310160000001120000000010000000000000000000121181028400000000202100000030000000000900000010000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................221227.002270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000120000000000000020030003000220000000000000000000000000000000000001408001140100216000000410100006030000000000000010001000005000000000000110150300130000010800000000000000000000000000001281322017200000002142000000600000000002511000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................211219.00219000000000001001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000012012040001053000000000000000000000000000000000000212801200880701103610000016000000000000000000000000000000000080000000100000003200000300000004000000000000000000000000000028690000000000100000000000000000000100000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGA.................................................................................181130.001300000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000013000000000010001200000000030000000000000000000000000000000000000341003101510470000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002108110411000000300100000000000000000000000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................211122.0012200000000000100000000000000001091010000000000000000000000000000000000000000000000000000000000000100000000000000000000101020032120000000000000000000000000000000000000003707002110912010000003000000000000000000000000000000000010000000000001000000001001000002000001000000000000000000000058280400000000000000000000000000000600000001000
..............................................................................................................................................CTCATTG---TTTACCAGTTGG...................................................................................................191112.001120000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000300000100000000000000002020011020020000000000000000000000000000000000004704000101385929000000000000000000000000000000000000000000000000000004300000001000000000000000000000000000000000000024132300000000000000000000000000000100000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................23183.00830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000020000005000100000000000000000000000000000000000001001000302010251000001000000000100000000000000000000000030000000000001200101001200000001000000000000000000000000000016381400000000001100000020000100000500001000000
.....................................................................................................................................................................TTTCGAGCAATAATTGAAACC.............................................................................21181.008100000000000000000000000000030000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000001000000000000000000000000000000000000006038400130132602000000000000000000000000000000000000000010000000000003000000000000000000000000000000000000000000000012010100000000000000000000000000000000000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGAAA...............................................................................20166.00660000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000300000110000000000000000000000000000000000000000000000000000000000000001220020026111730000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000023321000000000000000000000000000000100000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................20161.0061000020000001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000240300182712030000000000000000000000000000000000000000000000000000000001100001000000000000000000000000000000000000044160101000000000000000000000000000300000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGAA................................................................................19157.00570000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000020000000000000020000000000000000000000000000000000000000000000001180000011015300000000000000000000000000000000000000000010000000000003000000000000000000000000000000000000000000000103340201000000100000000000000000000200000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................21151.0051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000053000000000000000000000000000000000000210200000100000000001000000000000000000000000000000000000000000000001003302000202000001000000000000000000000000000017290000000000000000000000000000000200000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCAA.......................................................................................................................25150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000002420001000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000
....................................................................................................................................................................CTTTCGAGCAATAATTGT.................................................................................18244.0088000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000212022205130112402000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000054280000000000000000000000000000000000000000000
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................21144.0044000000000000000000000000000001531000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000100010000000000000000000000000000000000000320000031501010000002000000000000000000000000000000000000000000000003200000000000000000000000000000000000000000000001111200000000000000000000000000000100000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAA........................................................................................................................24143.00430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000001000001000000100000020000000000000000000000000000000000310000000010000000000001000000000000000000000000000000000000001010000000000000000000000000000000010000000100
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACA.............................................................................22138.0038000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000370002015130904000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAT.............................................................................................................................19129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000003001010001011000000000000000000000000000000000000010010000001000000000000000000000000000000000000000000000000000000000000001000100000001000000010000100000000000000012220000000000000000000000000000000500000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................22127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000002000100000000000000000000000000000000000000000210000020003020000001000000000000000000000000000000000000000000000001000100002000000004000000000000000000000000000012010000000000000000000000000000000000000000000
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................24126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000004400000000000000030000000000100000000000000000000000000000000000000000000000000000020100000000010000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000011000400000000001000000000000000000100000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................21126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000550000010100000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012140200000000001000000000000000000000000000000
........................................................................................................................TTTGATTGTTGCTCAGAAA............................................................................................................................19124.0024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000220300060601010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAG............................................................................................................................20122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000220200010104030000001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010020000000000000100000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAT............................................................................................................................20122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000160100000001010000004000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000030000000000100000000000000000000100000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAC............................................................................................................................20122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000003014000000000000000000000000000000000000120000000101020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAT........................................................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000132000100000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCATC.......................................................................................................................24119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGAA.........................................................................................................................23119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000000100010001010000001000000000000000000000000000000000000000000000001000100000000000001000000000000000000000000000012130000000000000000000000000000000100000000000
droEre2
T--AA--CCCTTTGGCTAA-G------T---------------------------------TT-GGTT-GTTTTATATAAGAGT-TC-----CTA--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCT-ATTA---TCTAACAGCTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCTTACAACGCTGA---AGA----TTTGACTGCATTTC-----GTGTTGGTAAGTA------AACASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................23143176.0043176374215151547402089156310
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................2219235.009235589764929651467300
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2113617.00361719233381252530870
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231562.0056226261315140
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................241467.0046749177342880
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................201341.003410234932930
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACC.............................................................................221309.00309141761445960
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................221245.002450226232120
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231218.00218184601990
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................181148.00148001101460
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................221128.001283929742470
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................191122.00122019401080
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241107.00107131592770
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................23195.0095013011800
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................24143.004303134050
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21131.003152110220
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................21130.0030313000140
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22130.003010100280
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................21123.002311820110
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................21120.002000400160
....................................................................................................................................................................CTTTCGAGCAATAATTGAAAC..............................................................................21115.00151121190
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................20111.001100010100
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................20111.00112001080
....................................................................................................................................................................CTTTCGAGCAATAATTGA.................................................................................18110.001000000100
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2419.0090501030
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................1818.0080000080
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAA........................................................................................................................2417.0070001060
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................2216.0060201030
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................1916.0061101030
.....................................................................................................................................................................TTTCGAGCAATAATTGAAACC.............................................................................2116.0060500010
.........................................................................................................................TTGATTGTTGCTCAGAAAG...........................................................................................................................1915.0050000050
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGC..........................................................................................................................2315.0050300020
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGAA.........................................................................................................................2315.0050000050
.......................................................................................................................TTTTGATTGTTGCTCAGAAATA..........................................................................................................................2215.0050100040
....................................................................................................................................................................CTTTCGAGCAATAATTGAA................................................................................1915.0050010040
....................................................................................................................................................................CTTTCGAGCAATAATTGAAA...............................................................................2015.0050010130
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................2014.0040000040
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCTT........................................................................................................................2414.0040000040
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAT........................................................................................................................2414.0040000040
........................................................................................................................TTTGATTGTTGCTCAGAAA............................................................................................................................1913.0030000030
.......................................................................................................................TTTTGATTGTTGCTCAGAAGC...........................................................................................................................2113.0030000030
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................2113.0030010020
.......................................................................................................................TTTTGATTGTTGCTCAGAAG............................................................................................................................2013.0030000030
.....................................................................................................................AATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2513.0030100020
droYak3
T--AA--CCCTTTGGCTAA-G------T---------------------------------TT-GGTT-TTTTTATATAAGAGT-TC-----C-G--C-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTACTA---TTTAACAGCTGGCTTTCGAGCAATAATTGAAACCAGATAAGTGATCCTTACAACATTGA---AGA----TTTGACTGCGTTTC-----GTGTTGGTAAGTA------AAAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................232238056.504761134691628418397761771423694581180
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................22210712.502142569414121561536193565900210
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2422553.505107251932344163146130000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2121304.5026091696120610416442751230
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACC.............................................................................2221011.00202237719381422400000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................242510.501021221078951500000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................222459.5091940486861000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................232192.5038510402292113000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................202170.003402501105195311000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................232119.502398022522200000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................232110.502211090542043400000
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................212103.0020615019000100000
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................18298.50197169010101700000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................24289.501791000351762100000
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................19268.50137100251101900000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................22265.0013048146282410000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................21248.5097940101100000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCG........................................................................................................................24233.5067650200000000
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21218.00361302020100000
.....................................................................................................................................................................TTTCGAGCAATAATTGAAACC.............................................................................21216.0032003100100000
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................20211.0022701400100000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22210.002050421800000
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2428.5017011500100000
............................................................................................................................ATTGTTGCTCAGAAAGCC.........................................................................................................................1827.0014401000000000
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................1926.5013001300000000
.......................................................................................................................TTTTGATTGTTGCTCAGG..............................................................................................................................1836.3319190000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2325.001040600000000
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................1825.001080001100000
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................2024.00850300000000
droEug1
TTTAC--CCTTTTGGCTAA-G------T---------------------------------TTT--T-GGTTTTATATAAGAGC-TC-----CAA--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTA---TTTAACAGTCGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCCTACAACGTTTG---TGA----TTTAAATACATTCT-----GTGATGGTAAGTG------AGCTSizeHit CountTotal NormTotal
No Reads
droBia1
T--AC--CCTTTTGGCTAA-G------T---------------------------------TTCGG-----CTTATATAAGAGC-TC-----CTC--A-----GCGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTA---TTTAACAGTTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACGTTTG---TTA----TGCCATCGCGTCTC-----GAGTTGGTAAGTG--------CASizeHit CountTotal NormTotal
No Reads
droTak1
T--AA--CCTTTTGGCTAA-G------T---------------------------------TT-GGTT-ACTTTATATAAGAGC-TC-----CTG--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATTA---CTTAACAGTTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACGATTG---TTA----GTTAATTGCGTCTT-----AAGATGGTAAGTA------CACASizeHit CountTotal NormTotal
No Reads
droEle1
T--AA--CCCTTTGGCTAA-G------T---------------------------------TT-GGTT-GTTTTATATAAGAGT-TC-----CTGG-A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTACTA---TTTAACAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTCACAACGAATG---TGA----TTTAATTAGACTTC-----AAAATGGTAAGTG------AACASizeHit CountTotal NormTotal
No Reads
droRho1
T--TA--CCTTTTGGCTAA-G------T---------------------------------TT-GGTT-GTTTTATATAAGAGT-TT-----CTG--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTAATA---TTT-ACAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTTACAACGTTTT--GTGA----TTTAAA-------C-----GAGATGGTAAGTG------AACASizeHit CountTotal NormTotal
No Reads
droFic1
T--AA--CCCTTTGGCTAAAG------T---------------------------------TT-GGTT-CTTTTATATAAGAGC-TC-----CTG--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTCATTA---CTTAACAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTTACAACGAAAGTGAA------TTTTGATAC--TCT-----TATATGGTAAGTG------AACASizeHit CountTotal NormTotal
No Reads
droKik1
C--AA--TCCTTTGGCTAA-A------T---------------------------------TTT--T-GGTTTTATATAAGAGT-TC-----CTGGAA-----ATGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTT--TA---TTTATCAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACGTTAT-GAAGTGTGATTTAGT-----TGT-----TAAAGGGTAAGTGTTTTCTAAAASizeHit CountTotal NormTotal
No Reads
droAna3
A--ATA-ATCTTTGGCTGT-A--ATAGT---------------------------------TT-GGCT-TTTTTATATAAGAGC-TC-----CTA--A-----ATGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATAA---ATTATTAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTGACAACATTTT--AAGT----GTGAAATATTCTTT-----TAAAGGGTGAGTA------AATASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................23114944.001494459536947619801366924
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................2217154.00715427458207894585510
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2111857.001857152017568381199
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................241492.0049221612423417
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231245.00245003373202
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACC.............................................................................221244.0024413178023228
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................221186.00186010386141
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................201179.00179513544112
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231127.0012701040977
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................18191.009100056035
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................19184.008413022157
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................24168.006804316144
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................22164.006451900040
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22137.00370009028
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21129.00291202024
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................21118.00180002016
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................21116.00160000016
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................21116.00160500011
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................20112.00120100011
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................20111.0011200108
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................24110.0010070120
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCTT........................................................................................................................2419.009000216
....................................................................................................................................................................CTTTCGAGCAATAATTGAAAC..............................................................................2119.009030231
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGAA.........................................................................................................................2319.009000108
.......................................................................................................................TTTTGATTGTTGCTCAGAAGC...........................................................................................................................2118.008000008
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................2318.008010106
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................2115.005000203
.......................................................................................................................TTTTGATTGTTGCTCAGAAG............................................................................................................................2015.005000104
.....................................................................................................................................................................TTTCGAGCAATAATTGAAACC.............................................................................2115.005040100
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2414.004020002
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................1914.004020002
.......................................................................................................................TTTTGATTGTTGCTCAGAACT...........................................................................................................................2114.004000301
.......................................................................................................................TTTTGATTGTTGCTCAGAAT............................................................................................................................2014.004000103
.......................................................................................................................TTTTGATTGTTGCTCAGAT.............................................................................................................................1923.006000402
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAA........................................................................................................................2413.003000003
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................1832.678000404
.............................................................................................................................TTGTTGCTCAGAAAGC..........................................................................................................................1612.002000200
....................................................................................................................................................................CTTTCGAGCAATAATTGA.................................................................................1812.002000101
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................2212.002000002
.......................................................................................................................TTTTGATTGTTGCTCAGAAAAA..........................................................................................................................2212.002000002
........................................................................................................................TTTGATTGTTGCTCAGAAA............................................................................................................................1912.002100001
droBip1
T--AA--TC-TTTGGCTGA-A--ATTGG---------------------------------TT-GGCT-TTTTTATATAAGAGA-TC-----CTA--A-----ACGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTTATAT---ATTTAAAGCTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGATCCTTACAACATT------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
A--TT--TT-TTTGTGTGA-A------T---------------------------------TC------AATTGTGAA-----AGTA-----TAA--G-----CCGGACACTTATCTATTTTTGATTGTTGCTCAGAAAGCCCTTATAA---TTAACCAGTTGGCTTTCGAGCAATTATCAAAGCCAAATAAGTGATCC----------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................23180302.00803022358451781435666021793213815131
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................22116662.001666251422647491187266365410827
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2111512.00151214047162033971202794
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................241488.0048815116187028000250
....................................................................................................................................................................CTTTCGAGCAATTATCAAAGCC.............................................................................221364.0036403301203280000
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................201222.0022209341248100145
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................221206.0020606273117300050
......................................................................................................................TTTTTGATTGTTGCTCAGAAAGC..........................................................................................................................231184.0018401556191000102
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241140.0014006270301502060
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231130.001300164301800071
......................................................................................................................TTTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................241117.00117021013400007
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................241112.00112007985400016
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................23184.00841030916700021
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................19179.0079231212500045
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................22148.0048018381340011
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21143.0043010110100030
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................18140.004010001800030
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................23137.003700281520001
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................21136.0036021632001012
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22123.00230103681004
....................................................................................................................................................................CTTTCGAGCAATTATCAAAGC..............................................................................21115.00150083220000
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................20113.001300012000010
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................2117.0070110020003
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................2017.0070011010004
......................................................................................................................TTTTTGATTGTTGCTCAGAAAG...........................................................................................................................2216.0060200100003
.....................................................................................................................................................................TTTCGAGCAATTATCAAAGCC.............................................................................2115.0050221000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCG........................................................................................................................2415.0050000000005
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................2215.0050000500000
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................2015.0050300010001
.....................................................................................................................ATTTTTGATTGTTGCTCAGAAAG...........................................................................................................................2314.0040000000004
......................................................................................................................TTTTTGATTGTTGCTCAGAAA............................................................................................................................2114.0040000000004
......................................................................................................................TTTTTGATTGTTGCTCAGAA.............................................................................................................................2014.0040000000004
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................1914.0040000200002
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGTA.........................................................................................................................2313.0030000100002
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAT........................................................................................................................2413.0030000100002
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCC........................................................................................................................2313.0030010000002
.......................................................................................................................TTTTGATTGTTGCTCAG...............................................................................................................................1713.0030000000003
droPer2
A--TT--TT-TTTGTGTGA-A------T---------------------------------TC------CATTGTGAA-----AGTA-----TAA--A-----CCGGACACTTATCTATTTTTGATTGTTGCTCAGAAAGCCCTTATAA---TTAACCAGTTGGCTTTCGAGCAATTATCAAAGCCAAATAAGTGATCCCAACAACATTTT---AGT----GTGAAATACTTGAC-----TCAAAGGTAAGTG------AAAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................23143819.0043819386125114371830183653
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................2216166.00616645251543666450719
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2111577.00157766185142741020
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2411055.00105594501042553
......................................................................................................................TTTTTGATTGTTGCTCAGAAAGC..........................................................................................................................231169.0016916204300
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................241163.0016315502240
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................201132.00132481245360
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231104.00104341531321
......................................................................................................................TTTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................24182.00828000020
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................24178.0078420516150
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................23168.0068140720270
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................19168.0068120121340
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................18166.0066190217280
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................22138.00382572310
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................22136.003610220130
....................................................................................................................................................................CTTTCGAGCAATTATCAAAGCC.............................................................................22132.0032639860
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCG........................................................................................................................24126.00262500010
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22125.00254011460
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................21114.00141210100
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................20112.00121200000
......................................................................................................................TTTTTGATTGTTGCTCAGAAAG...........................................................................................................................2219.009800100
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................2317.007400300
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................2017.007210310
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................2116.006100311
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................2115.005201020
.........................................................................................................................TTGATTGTTGCTCAGAAAG...........................................................................................................................1915.005300002
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................2115.005000230
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAA........................................................................................................................2414.004300010
....................................................................................................................................................................CTTTCGAGCAATTATCAAAGC..............................................................................2114.004000130
......................................................................................................................TTTTTGATTGTTGCTCAGAAA............................................................................................................................2113.003200010
......................................................................................................................TTTTTGATTGTTGCTCAGAA.............................................................................................................................2013.003300000
.......................................................................................................................TTTTGATTGTTGCTCAGAT.............................................................................................................................1913.003000210
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................2213.003200010
......................................................................................................................TTTTTGATTGTTGCTCAGA..............................................................................................................................1913.003100020
.......................................................................................................................TTTTGATTGTTGCTCAGAAG............................................................................................................................2012.002000020
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCTT........................................................................................................................2412.002000011
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................2112.002000020
.....................................................................................................................ATTTTTGATTGTTGCTCAGAA.............................................................................................................................2112.002200000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCCT.......................................................................................................................2512.002200000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGAA.........................................................................................................................2321.503001200
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................1831.334100030
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2311.001100000
.....................................................................................................................ATTTTTGATTGTTGCTCAGA..............................................................................................................................2011.001100000
droWil2
T--GG--TCCTTTAGC-AT-C------A-TCATTTGGTAAACTGAATGTTTGTGAATTGGTTT-GCTT-ATTT------------GC-----CCA--T-----CTGGACACTTATATAATTTTGATTGTTGCTCAGAAAGCCCTCATTA--CTTTATCAGTTGGCTTTCGAGCAATAATTGAAACCAAATAAGTGAGCCTGTCA-----------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................231312741.003127412254352671405651730382
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................22156057.00560572893854261389613143
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................21115687.00156878707232325884346
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2419781.009781840953595769
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................2414089.004089345250400232
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................2011774.001774129520110367
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................1811077.001077102500844
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231801.0080131202186301
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241590.0059032420140124
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................191520.00520418001983
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231479.00479341006375
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................221353.00353980049206
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................221352.003521641718486
....................................................................................................................................................................CTTTCGAGCAATAATTGAAACC.............................................................................221310.003101285113937
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCG........................................................................................................................241215.002152110022
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................211215.0021519600217
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................211149.0014980103236
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................211114.0011425502955
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22148.004820001216
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................20147.00471300826
.......................................................................................................................TTTTGATTGTTGCTCAGG..............................................................................................................................18245.5091910000
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................20143.0043411532
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................20143.00433200110
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................23140.0040290065
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCCT.......................................................................................................................25133.0033280023
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................21122.0022180031
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCC........................................................................................................................23121.0021120027
............................................................................................................................ATTGTTGCTCAGAAAGCC.........................................................................................................................18120.0020160022
.........................................................................................................................TTGATTGTTGCTCAGAAAG...........................................................................................................................19118.0018300411
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................19112.001221018
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................24111.001120081
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCT........................................................................................................................23111.001170031
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................21110.001050041
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................22110.001050104
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAT........................................................................................................................2418.00840004
.......................................................................................................................TTTTGATTGTTGCTCAGAAG............................................................................................................................2018.00860011
.......................................................................................................................TTTTGATTGTTGCTCAGAAGC...........................................................................................................................2128.001600079
.......................................................................................................................TTTTGATTGTTGCTCAGAAT............................................................................................................................2018.00860002
..........................................................................................................................TGATTGTTGCTCAGAAAGCCCT.......................................................................................................................2217.00750002
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGAA.........................................................................................................................2317.00710015
.....................................................................................................................AATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2517.00700052
........................................................................................................................TTTGATTGTTGCTCAGAAA............................................................................................................................1917.00710006
..........................................................................................................................TGATTGTTGCTCAGAAAGC..........................................................................................................................1916.00620022
.......................................................................................................................TTTTGATTGTTGCTCAGAT.............................................................................................................................1916.00640011
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCTT........................................................................................................................2416.00610014
....................................................................................................................................................................CTTTCGAGCAATAATTGAAAC..............................................................................2116.00610032
..........................................................................................................................TGATTGTTGCTCAGAAAG...........................................................................................................................1815.00510004
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCCA.......................................................................................................................2515.00530020
..............................................................................................................................................CTCATTA--CTTTATCAGTTGG...................................................................................................2015.00500050
.........................................................................................................................TTGATTGTTGCTCAGAAAGCCT........................................................................................................................2214.00430001
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCCC.......................................................................................................................2514.00440000
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGC..........................................................................................................................2314.00400040
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCAA........................................................................................................................2414.00410012
.......................................................................................................................TTTTGATTGTTGCTCAGC..............................................................................................................................1814.00440000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCA.........................................................................................................................2214.00420002
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................1873.8627260001
.....................................................................................................................................................................TTTCGAGCAATAATTGAAACC.............................................................................2113.00300021
droVir3
C--AA--ACATTTT-CCAA-GTTACAACT--------------------------------CC-ATTT-CCTTCCTAC-----CTCA-----CAA--A-----ACGGACGCCTATATCATTTTGATTGTTGCTCAGAAAGCCCTG--CA---TTCAATACTTGGCTTTCGAGTAATAATCGAAACCAAATAAGCGATCCTAACTACGTTTA----------CCTA-ATATTATTATCATGGTCCAGGTAAGT-----------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................23175030.00750303192055436350162015000000019313089176103715993405321118660100000041261618006819403436159346389197161861556339353095191522014136128203494763298343394455129177216206218
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................2217885.00788544309481856128000000054502557361602074120331211000002011310000101118361844371915632074268250011812166611849327549222194342
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2415009.00500910144202300020000000220322024000000000000001015811010243471071911502452276768371872884000003514152641372528164
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2111758.00175818725372125100000046271735195113440111530030000001300000000100300011188249930001131423412101603299
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................201450.0045021702300100000002423132511801433011010103000000000000000000010001000498000010002200010103
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................241267.0026701470670000000000000000000000000000000000000000000002245721001353000000121000020102
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................181198.00198418100000000000000011000000000000100000000000000000000000000015000010010000100010
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231164.001641980210000000000001010011000000000000000000000000000101010009317000010031002000001
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................191150.00150173120000000000642100002000100100000000000010000000000000001245000000020400001000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241126.0012604901000000000002001012020000000000000000010000000000011000142815000000021220100000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................221114.00114024362000000000010030000200000000000000000000000000001001000365000000000011000010
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231100.001000410400000000001211110030001000000000000000000000000201000021224000011000000001000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCG........................................................................................................................24179.0079037000000000000000000000000000000000000000000000000040200013311000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................22161.0061113060000000000022210003000000000000000000000000000000100000030000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAA...........................................................................................................................21154.005403701000000000041111100200010000000000000000000000000000000001000000000001000011
.......................................................................................................................TTTTGATTGTTGCTCAGG..............................................................................................................................18134.003403400000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................21133.003316021000000000001000000000000000000000000000000000000000100110000000010000000000
....................................................................................................................................................................CTTTCGAGTAATAATCGAAACC.............................................................................22132.003201029000000000000001100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................23118.001803011000000000000000000000000000000000000000000000001000000012000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22116.00160301000000000000000000100000000000000000000000000000000000036100000000000000100
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21112.00120602000000000000000000000000000000000000000000000000000000022000000000000000000
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2419.0090001000000000000000000000000000000000000000000000110013000100000000000100000000
.......................................................................................................................TTTTGATTGTTGCTCAGT..............................................................................................................................1817.0070700000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAT...........................................................................................................................2117.0070000000000000001100000000000000000000000000000000000000000032000000000000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2316.0060200000000000000000000000000000000000000000000000001000000210000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................2214.0040300000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................2014.0040301000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAC...........................................................................................................................2114.0040200000000000000000000000000000000000000000000000000000000002000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAT............................................................................................................................2014.0040200000000000000000000000000000000000000000000000000000000002000000000000000000
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................2013.0030000000000000000001000100000000000000000000000000000000000010000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAAA..........................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000011000000000000010000
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2513.0030000000000000000000000000000000000000000000000000001000000200000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCTT........................................................................................................................2413.0030200000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................1912.0020001000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAG............................................................................................................................2012.0020000000000000000001000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCCT.......................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000200000000000000000000
droMoj3
T--AATAACCGTCAGCC-----------------------------------------------------------------------------A--A-----ACGGACCCTTATATAATTTTGATTGTTGCTCAGAAAGCCCGTAATTTAACTTA--ACATGGCTTTCGAGTAATAATCGAAACCAAATAAGGCATCCAAACATCATTTT----------GTCAAAAATTT-----------------------------CASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................231394773.003947732381125014953434378156200
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................22124432.002443210324982947242074370
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2412114.00211422013563180211
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCC........................................................................................................................2412096.0020961404820430
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2111779.0017796423135475533738
........................................................................................................................TTTGATTGTTGCTCAGAAAGCC.........................................................................................................................2211462.00146219233814072
....................................................................................................................................................................CTTTCGAGTAATAATCGAAACC.............................................................................2211123.001123410111170
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................231347.0034713313372549
.........................................................................................................................TTGATTGTTGCTCAGAAAGCC.........................................................................................................................211291.0029155022790
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................201220.0022021860109166
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCA........................................................................................................................241201.0020134711231143
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCG.........................................................................................................................231174.0017404011690
........................................................................................................................TTTGATTGTTGCTCAGAAAGCCC........................................................................................................................231111.0011104111050
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCA.........................................................................................................................231102.00102030931311
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGA..........................................................................................................................221100.0010014922613
........................................................................................................................TTTGATTGTTGCTCAGAAAGC..........................................................................................................................21195.009511601770
.......................................................................................................................TTTTGATTGTTGCTCAGAA.............................................................................................................................19184.008483204751
.......................................................................................................................TTTTGATTGTTGCTCAGA..............................................................................................................................18180.008003333860
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGC..........................................................................................................................23153.00530424430
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGT..........................................................................................................................22149.00492882281
......................................................................................................................ATTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................24148.00480100470
.....................................................................................................................................................................TTTCGAGTAATAATCGAAACC.............................................................................21126.00260000260
.........................................................................................................................TTGATTGTTGCTCAGAAAGC..........................................................................................................................20121.00212000190
...........................................................................................................................GATTGTTGCTCAGAAAGCC.........................................................................................................................19121.00210301170
..........................................................................................................................TGATTGTTGCTCAGAAAGCC.........................................................................................................................20117.00171000160
....................................................................................................................................................................CTTTCGAGTAATAATCGAAAC..............................................................................21112.00120010110
............................................................................................................................ATTGTTGCTCAGAAAGCC.........................................................................................................................18111.0011111080
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGG..........................................................................................................................22110.0010070030
..............................................................................................................................................CGTAATTTAACTTA--ACATGG...................................................................................................2019.009000090
........................................................................................................................TTTGATTGTTGCTCAGAAAG...........................................................................................................................2018.008600200
droGri2
T--ATA-ATTTATGGTTA------CTAGT--------------------------------GT-GTTC-TCCTGATGC-----CTGAAACAGCCA--ACTACTATGGACGCTCATATAATTTTGATTGTTGCTCAGAAAGCCTTT--CA---CTTGACACTTGGCTTTCGAGTAATAATCGAAACCAAATAAGCGATCCT---------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCC.........................................................................................................................23121.0021813
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGC..........................................................................................................................2214.00413
.......................................................................................................................TTTTGATTGTTGCTCAGAAA............................................................................................................................2012.00211
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCCT........................................................................................................................2411.00101
.......................................................................................................................TTTTGATTGTTGCTCAGAAAG...........................................................................................................................2111.00101
.......................................................................................................................TTTTGATTGTTGCTCAGAAAGCT.........................................................................................................................2311.00101

Generated: 10/20/2015 at 06:56 PM