ID:

dsi-mir-309

 Coordinate:

2r:16196481-16196549 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.6 -17.5 -17.3

Flybase annnotation

utr3 [utr3_minus_3620]; utr3 [utr3_minus_3619]

No Repeatable elements found

Sense Strand Reads

AAGTGTGAGGATCTAGTAGTGCAAAGCAAGTCTTAAAGTTTGGAACAGCAATTATACGACAAACCTTGTTCGGTTTTGCCAATTTCCAAGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAACGACGACCAGCTAATTGTGAACCACCAAAGGTCCCGATCCTGG

*****************************************.........((((((.(((((((.(((((((((.((((..........)).)).))))))))).))))))).))))))...........*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487

NRT_0-2 hours eggs

 SRR553488

RT_0-2 hours eggs

 GSM343915

embryo

 M025

embryo

 SRR553485

Chicharo_3 day-old ovaries

 SRR553486

Makindu_3 day-old ovaries

 O002

Head

 M053

female body

 SRR618934

dsim w501 ovaries

 M023

head

 O001

Testis
.............................................................................................GCACTGGGTAAAGTTTGTCCTA...................................................... 22 0 1 37772.00 37772 19303 17295 974 4 128 48 15 2 1 1 1
.............................................................................................GCACTGGGTAAAGTTTGTCCT....................................................... 21 0 1 1373.00 1373 401 339 606 11 7 4 3 0 2 0 0
........................................................CGACAAACCTTGTTCGGTTTTG........................................................................................... 22 0 1 406.00 406 1 3 20 380 0 0 0 1 0 1 0
.............................................................................................TCACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 74.00 74 42 32 0 0 0 0 0 0 0 0 0
.............................................................................................CCACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 62.00 62 35 26 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAA..................................................... 23 1 1 48.00 48 18 25 5 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCAGTTTTG........................................................................................... 22 1 1 47.00 47 20 27 0 0 0 0 0 0 0 0 0
..................................................................................................GGGTAAAGTTTGTCCTA...................................................... 17 0 1 37.00 37 6 31 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAATTTTGTCCTA...................................................... 22 1 1 36.00 36 25 10 0 0 0 1 0 0 0 0 0
...............................................................................................ACTGGGTAAAGTTTGTCCTA...................................................... 20 0 1 36.00 36 27 8 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCC........................................................ 20 0 1 33.00 33 2 5 26 0 0 0 0 0 0 0 0
................................................................................................CTGGGTAAAGTTTGTCCTA...................................................... 19 0 1 30.00 30 11 19 0 0 0 0 0 0 0 0 0
.............................................................................................ACACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 29.00 29 14 13 1 0 0 1 0 0 0 0 0
.............................................................................................GCACTGGGAAAAGTTTGTCCTA...................................................... 22 1 1 29.00 29 14 15 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ACCAAAGGTCCCGATCCTG. 19 0 1 29.00 29 0 0 13 16 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTTTCCTA...................................................... 22 1 1 27.00 27 19 7 1 0 0 0 0 0 0 0 0
..............................................................................................CACTGGGTAAAGTTTGTCCTA...................................................... 21 0 1 26.00 26 16 9 0 0 0 0 0 1 0 0 0
...................................................................................................GGTAAAGTTTGTCCTA...................................................... 16 0 1 23.00 23 7 16 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGTTAAAGTTTGTCCTA...................................................... 22 1 1 23.00 23 12 11 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCTTA...................................................... 22 1 1 22.00 22 12 9 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTCCTA...................................................... 22 1 1 22.00 22 8 8 6 0 0 0 0 0 0 0 0
.............................................................................................GCACTGTGTAAAGTTTGTCCTA...................................................... 22 1 1 22.00 22 9 13 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGCTAAAGTTTGTCCTA...................................................... 22 1 1 20.00 20 11 7 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTATCCTA...................................................... 22 1 1 19.00 19 7 8 4 0 0 0 0 0 0 0 0
.............................................................................................GTACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 18.00 18 11 5 1 0 0 1 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGTTTT............................................................................................ 21 0 1 18.00 18 8 5 5 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGCCCTA...................................................... 22 1 1 17.00 17 6 9 1 1 0 0 0 0 0 0 0
.............................................................................................GCATTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 16.00 16 7 8 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTTTGTCCTA...................................................... 22 1 1 16.00 16 9 5 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGCTTGTCCTA...................................................... 22 1 1 15.00 15 5 3 7 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTC...................................................... 22 1 1 14.00 14 6 7 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTGAAGTTTGTCCTA...................................................... 22 1 1 13.00 13 7 4 2 0 0 0 0 0 0 0 0
....................................................................................................GTAAAGTTTGTCCTA...................................................... 15 0 1 13.00 13 3 10 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTTCTA...................................................... 22 1 1 13.00 13 7 4 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCATA...................................................... 22 1 1 13.00 13 6 7 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAACGTTTGTCCTA...................................................... 22 1 1 13.00 13 1 1 11 0 0 0 0 0 0 0 0
....................................................................................................................................................CACCAAAGGTCCCGATCCTG. 20 0 1 13.00 13 0 0 4 9 0 0 0 0 0 0 0
.................................................................................................TGGGTAAAGTTTGTCCTA...................................................... 18 0 1 12.00 12 5 7 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTC......................................................... 19 0 1 11.00 11 0 0 10 0 0 0 1 0 0 0 0
.............................................................................................GCACCGGGTAAAGTTTGTCCTA...................................................... 22 1 1 11.00 11 3 8 0 0 0 0 0 0 0 0 0
.............................................................................................GCGCTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 11.00 11 6 3 1 0 0 1 0 0 0 0 0
.............................................................................................GCACTGGGTAAGGTTTGTCCTA...................................................... 22 1 1 11.00 11 5 4 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTCTCCTA...................................................... 22 1 1 10.00 10 2 2 6 0 0 0 0 0 0 0 0
.............................................................................................GCACTTGGTAAAGTTTGTCCTA...................................................... 22 1 1 9.00 9 5 4 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCCA...................................................... 22 1 1 8.00 8 3 3 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCGTA...................................................... 22 1 1 8.00 8 2 5 1 0 0 0 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 8.00 8 6 2 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTG...................................................... 22 1 1 8.00 8 3 4 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAGAGTTTGTCCTA...................................................... 22 1 1 8.00 8 3 3 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTCGGTAAAGTTTGTCCTA...................................................... 22 1 1 8.00 8 3 5 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTCGTCCTA...................................................... 22 1 1 8.00 8 4 3 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTT...................................................... 22 1 1 8.00 8 4 1 3 0 0 0 0 0 0 0 0
...........................................................................................CAGCACTGGGTAAAGTTTGTCCT....................................................... 23 0 1 8.00 8 1 4 1 2 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGGCCTA...................................................... 22 1 1 7.00 7 2 3 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGTTTGTCCTA...................................................... 22 1 1 7.00 7 0 0 7 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGTTTGTCCT....................................................... 21 1 1 7.00 7 0 0 7 0 0 0 0 0 0 0 0
.............................................................................................GCTCTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 7.00 7 4 2 1 0 0 0 0 0 0 0 0
.............................................................................................GCAGTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 6.00 6 2 4 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTGCTA...................................................... 22 1 1 6.00 6 2 2 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGCGTAAAGTTTGTCCTA...................................................... 22 1 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAT..................................................... 23 0 1 6.00 6 0 4 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGT.......................................................... 18 0 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGATAAAGTTTGTCCTA...................................................... 22 1 1 6.00 6 2 4 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAACGTTTGTCCT....................................................... 21 1 1 5.00 5 0 0 5 0 0 0 0 0 0 0 0
......................................................................................................................................................CCAAAGGTCCCGATCCTG. 18 0 1 5.00 5 0 0 0 5 0 0 0 0 0 0 0
..........................................................................................CCAGCACTGGGTAAAGTTTGTC......................................................... 22 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACAGGGTAAAGTTTGTCCTA...................................................... 22 1 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGAGTAAAGTTTGTCCTA...................................................... 22 1 1 5.00 5 3 1 0 0 1 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGATTGTCCTA...................................................... 22 1 1 5.00 5 1 1 3 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAAA.................................................... 24 1 1 5.00 5 0 2 3 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTATAGTTTGTCCTA...................................................... 22 1 1 5.00 5 2 1 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTCTGTCCTA...................................................... 22 1 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGTTTTGT.......................................................................................... 23 1 1 4.00 4 0 0 2 2 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTACTA...................................................... 22 1 1 4.00 4 1 0 3 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCAGTTTT............................................................................................ 21 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0
...............................................................................................ACTGGGTAAAGTTTGTCCT....................................................... 19 0 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0
..........................................................................................CCAGCACTGGGTAAAGTTTGTCCTA...................................................... 25 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGACCTA...................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAAGTTTGTCCT....................................................... 21 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAAGTTTGTCCTA...................................................... 22 1 1 4.00 4 1 0 3 0 0 0 0 0 0 0 0
............................................................................................AGCACTGGGTAAAGTTTGTCCTA...................................................... 23 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAATGTTTGTCCTA...................................................... 22 1 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTTTCCTT...................................................... 22 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0
..............................................................................................GCCTGGGTAAAGTTTGTCCTA...................................................... 21 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
.............................................................................................GAACTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0
...................................................................................................GGTAAAGTTTGTCCT....................................................... 15 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTCCT....................................................... 21 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0
.............................................................................................TCACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0
.............................................................................................GCACTAGGTAAAGTTTGTCCTA...................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGATTTG........................................................................................... 22 1 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGGTTGTCCTA...................................................... 22 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCC....................................................... 21 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGCCCT....................................................... 21 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0
............................................................................................AGCACTGGGTAAAGTTTGTCCT....................................................... 22 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCAGTTTTGA.......................................................................................... 23 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGCTTGTCCT....................................................... 21 1 1 3.00 3 0 0 2 1 0 0 0 0 0 0 0
.............................................................................................GCCCTGGGTAAAGTTTGTCCTA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGCTTGTCCTA...................................................... 22 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGCTTGTCCTA...................................................... 22 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGGCCT....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGGTTGTCCTA...................................................... 22 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTTCT....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACCGGGTAAAGTTTGTCCT....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGGTTGTCCT....................................................... 21 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCGA...................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................CCAGGCACTGGGTAAAGTTTGTCCTA...................................................... 26 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................GCACGGGGTAAAGTTTGTCCTA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTGTGTCCTA...................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................ACACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.......................................................ACGACAAACCTTGTTCGGTTTT............................................................................................ 22 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTTTGTCCT....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGCTTGTCCT....................................................... 21 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAGGTTTGTCCT....................................................... 21 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
........................................................................................CACCAGCACTGGGTAAAGTTTGTCCTA...................................................... 27 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
............................................................................................CGCACTGGGTAAAGTTTGTCCTA...................................................... 23 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCA....................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................CACGGGGTAAAGTTTGTCCTA...................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAGAGTTTGTCCT....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTTC........................................................ 20 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GAACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCAA...................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACCGGGTAAAGTTTTTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAGAGTTTGTCC........................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................ACCACCAAAGGTCCCGATCCTG. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAAGTTTGTTCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTAGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................GACGAACCTTGTTCGG................................................................................................ 16 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTATCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTCGCCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGTTTTGTCG........................................................................................ 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGTTTTA........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................GCATTGTGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGCTTTG........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCTAGTTTGTCCGA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAGAGTTTGTCCCA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TTACTGGGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAATGTTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGATAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAATGTTTGTCCTT...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTGAAGTTTGTCCTT...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGTTTGTACTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTACTT...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTAGTCATA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTTACGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................CAGGCACTGGGTAAAGTTTGTCCTA...................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGAGCACTGGGTAAAGTTTGTCCTA...................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................CTAGCACTGGGTAAAGTTTGTCCTA...................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGGTTTG........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................GCACTCGGTAAAGTTTGTCCTC...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ACCAAAGGTACCGATCCTG. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GAACTGGGTAAAGTTTGACCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................TGGCACTGGGTAAAGTTTGTCCTA...................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGATTATCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTT............................................................. 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCCAGTTTCTCCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................AGACAAACCTTGTTCGGTTTT............................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................CGACAAACATTGTTCGGTTTTG........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACGGGGTAAATTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TACGCACTGGGTAAAGTTTGTCCTA...................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................TCACTGGGTGAAGTTTGTCTTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAACTTTGTCCTA...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCCCTGGGTCCAGTTTGTCCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGTTTCTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCAATGGGTAAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTTTTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGCTCGGTTTTG........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................CCGTGCACTGGGTAAAGTTTGTCCTA...................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................TGGGTAAAGTTTGTCCT....................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTGGGTAAAGTTTTTCCTA...................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................CCACAAACCTTGTTCGGTTTTG........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................CAGCACTGGGTAAAGTTTGTC......................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCACAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................AGCACTGGGTCAAGTTTGTCCT....................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGACCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTCTCCTC...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTTTGTACTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGGTTGTCC........................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................CCAGTTGGTAAAGTTTGTCCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGGTTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................CACTGGGTAAAGTTTGTCCTAT..................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGT............................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTTAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................TTGCACTGGGTAAAGTTTGTCCTA...................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................TCACCGGGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGTGTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................GGTAAAGTTTGTCTTA...................................................... 16 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGGTCGGTTTT............................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCAGGTTTG........................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGACTGGGTTAAGTTTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAAAA................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GGACTGGGTAAAGCTTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................CCACTGGGTAAAGTTTGTCATA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGTTTGG........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACTGGGTAAACTTTGTCCTA...................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTCCTC...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................CGACCAACATTGTTCGGTTCTG........................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................ACCAAAGGCCCCGATCCTG. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TCACTGGGTAAAGTTTGTTCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................CCACTGGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCAATGGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCAATGGGTAAAGTTTGGTCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................CGTGCACTGGGTAAAGTTTGTCCTA...................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACCGAGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................TGAGCACTGGGTAAAGTTTGTCCTA...................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................ATACGACAAACCTTGTTCAGTT.............................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTACAGATTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTTGGTAAAGTTTGGCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAATATTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTACCGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGATTGGGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTACT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTAGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGCTCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCG....................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGCTTTTCCTT...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCCCTGGGTAAAGTTTGGCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGATTCTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCGCTGGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCAT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGAGTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAACGTTTGTCCTAA..................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GAACTGGGTAAAGTTTGTTCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................TTTGCACTGGGTAAAGTTTGTCCT....................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAACGTTTGTCCTC...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACCGGGTAAAGTTTGTACT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCCAAGTTTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCTA....................................................... 21 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAAGTTTGTCCTG...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................GCCTGGGTAAAGTTTGTCCT....................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGAACAGATTGTCCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCAATGGGTAAAGATTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTGTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGATTGTCA........................................................ 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAACGTTTCTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTAC..................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAACTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGGGTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGGAAAGATTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTCGGTAAAGTTTGCCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAATTTTGTCC........................................................ 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTTAAGTATGGCCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TAACTGGGTAAAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTGAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTGC........................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAAGTTTGTTCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTTGGTAAATTTCGTCCTA...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................ACACTGGGTAACTTTTGTCCT....................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAATTTGTCCTA...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GAACTAGGTAAAGTTTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGAAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................CGACAAACCTTGTTCGGCTTT............................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTCTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................CACTGGGTAAAGTTTGTCCT....................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCCAGTTTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCAATGGGTATAGTTTGTCC........................................................ 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................ACGACAAACCTTGTTCAGTTT............................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................CCACTGGGTAAAGTTTGCCCTA...................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAATGGTTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCGCTGGGTAAAGTTTGTACTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................GCTGGGTAAAGTTTGTCCTA...................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTTGGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................AGAACTGGGTAAAGTTTGTCCTA...................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCTCTGGGTAAGGTTTGTCCTG...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................CACCAAAGGTCCCGATCCGG. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAACGTTTGTCCTAT..................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTCGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCCCGTTTGTCCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GTACTGGGTACAGTTTGTTCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCCTTT..................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAGAGTTTGTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAATGGTTGTCCTT...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAACCTTTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................ACACTGGGTAAAGTTTTTCCT....................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCAAGTGTGTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GTACTGGGTAAAGTTTGGCCTA...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTTAAGTTTGTCCTA...................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................CCGGCACTGGGTAAAGTTTGTCCTA...................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACGGGGTAAAGTTTCTCCTA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTGTCTT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGAGTAAAGTTTGTCCT....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCACAGTTTGTCC........................................................ 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................AGACAAACCTTGTTCGGTTTTG........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................CGTCAGCACTGGGTAAAGTTTGTCCTA...................................................... 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................ACACTGGGAAAAGGTTGTCCTA...................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTATAGCTTGTACT....................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAATTTTTGTCCT....................................................... 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCAATGGGTAACGTTTATCCT....................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTCCCGTTTGTCCT....................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAAGTTTGTTC........................................................ 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................TCACTGGGCAAAGTTTGTCGTA...................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCAATGGGGAAAGTTTGTGCTA...................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAAACCTTGTCCT....................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGAAAAGTTTGTACTA...................................................... 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GAATTGGGTAAGGTTTGTCCTA...................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................GTAAAGTTTGTCCTAAA.................................................... 17 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................TCACTGGGTAAAGTTTGTCGCA...................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGATTGTTCTT...................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTTAAGTTTGTGCTT...................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGCAATGTTTGTCCT....................................................... 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GAACTGGGTAAAGTTTGTTCTC...................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCACTGGGTAAAGTTTTTCCTC...................................................... 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTCACACTCCTAGATCATCACGTTTCGTTCAGAATTTCAAACCTTGTCGTTAATATGCTGTTTGGAACAAGCCAAAACGGTTAAAGGTTCGGTCGTGACCCATTTCAAACAGGATATTAGGGCTTTGCTGCTGGTCGATTAACACTTGGTGGTTTCCAGGGCTAGGACC

***************************************.........((((((.(((((((.(((((((((.((((..........)).)).))))))))).))))))).))))))...........***************************************** 		Read size # Mismatch Hit Count Total Norm Total M023

head

 SRR553486

Makindu_3 day-old ovaries

 SRR553488

RT_0-2 hours eggs

 SRR902009

testis

 M024

male body		 SRR618934

dsim w501 ovaries
..............................................................................................................CGGCTATTAGGGATTTGCTG....................................... 20 3 2 0.50 1 0 1 0 0 0 0
...........................................................................................................ACCAGGATGTTGGGGCTTTG.......................................... 20 3 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................GCTTGGATGCTGGTCGACTAA........................... 21 3 4 0.25 1 0 0 1 0 0 0
..........................................................................................................................CTTGGCTGCTGGGGGATTA............................ 19 3 5 0.20 1 0 0 0 1 0 0
............................................................................................................CCAGGATGTTGGGGCTTTG.......................................... 19 3 10 0.20 2 2 0 0 0 0 0
...............................GAATTTTAAACCTTGTCT........................................................................................................................ 18 2 20 0.15 3 3 0 0 0 0 0
.......................................................................................................................GGGTTCTGCTGCTGGTCG................................ 18 2 10 0.10 1 0 0 0 0 1 0
...........................................................................................................................TTTCCTGCTGGTCGGTTA............................ 18 2 12 0.08 1 0 0 0 0 0 1
.............................................................................................................................TGCTGCTGCTCGATT............................. 15 1 19 0.05 1 0 0 1 0 0 0
..................................................................................................................................CTGGCCGATTCACACTAG..................... 18 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 2r:16196431-16196599 - dsi-mir-309 Known_mirbase AAGTGTGAGGATCTAGTAGTGCA--------AA-----------GC-AA------------------GT--CTTAA----------------AGTTTGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCT--A------A--------------------------------TTGTG-------------AACCACC-AA--------AGGTCCCGATCCTGG
droSec2 scaffold_1:13063888-13064057 - dse-mir-309 Known_mirbase AAGTGTGAGCATCCAGCAGTGAA--------AA-----------GCAAT------------------GT--CTTAA----------------AGTTTGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCT--A------A--------------------------------TTGTG-------------AATCACC-AA--------AGGTCCCGATCCTGG
dm3 chr2R:15549161-15549330 - dme-mir-309 Known_mirbase AAGTGTAAGGATCCCGCAGTGAG--------AA-----------GCGAA------------------GT--CTTAA----------------AGTTTGGAATAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCT--A------A--------------------------------TTGTG-------------AGCCACC-TA--------AGGTCCCGATCCTGG
droEre2 scaffold_4845:9749405-9749574 - der-mir-309 Known_mirbase AAGTGTGAGGATCCCGCAGTGAA--------AA-----------GTAAA------------------GT--ATA----------------CGAGTTTGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCC--A------A--------------------------------TTGTG-------------AACCCAC-CA--------AGGTCCTGATCCTGG
droYak3 2R:13623451-13623628 + dya-mir-309 Known_mirbase AAGTGTGATGATCCAGCAGTGAA--------AA-----------CAAAAGTATCAAA----------GC-----AA----------------AGTTTGGAACAG-CAATTATACGACAAACCTTGTTCTGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCA--G---CCAA--------------------------------GTGTG-------------AACCATC-AA--------AGGTCCTGATCCTGG
droEug1 scf7180000409474:2396572-2396739 + GGATGTGAAGATCAAGCAGTGAA--------AA-----------C-AAA------------------------A----------------TCAGTTCGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTGCT-------AGTCAGCACTGGGTAAAGTTTGTCCTATAATCCCGATAA--TACAAC-CAGCT--A------A--------------------------------TAGTG-------------AATCTACCAA-----A-ACGGTCCCGATCCTGG
droBia1 scf7180000302143:3060051-3060217 - GAGTGTGACGATCCAGCAGTGAA--------A--------------GAA------------------GT--AAA----------------TCAGCTCGGGACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAA--GACGAC-CAGCA--A------A--------------------------------GTGTG-------------AAGCACCCGA--------AGGTCCCGATCCTGG
droTak1 scf7180000415384:83758-83925 + GAGTGTGAGGATCCAGCAGTGAA--------AA-------------AAA------------------GT--AAA----------------ACAGTTCGGAACAG-TAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAA--GACGAC-CAGCT--T------A--------------------------------TTGTG-------------AACCAACCAA--------AGGTCTCGATCTTGG
droEle1 scf7180000491201:2014224-2014405 - GAGTGTGAGGATCCAGCAGTGAA--------AC-----------ATAGA---TCAAAGCAGCAA---GCAACTCGA----------------A----GGAAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAA--GACGAC-CATCTCGA------A--------------------------------CAGTG-------------AATTATCGAA--------AGGCCCCGATCTTGG
droRho1 scf7180000780066:73360-73528 + GAGTATGAGGATCCAGCAGTGAA--------CC-----------AAAAA------------------GT--AAA----------------TAAGCTCGGAAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCA----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTTGAAAA--GACGAC-CAGCT--A------A--------------------------------CTGTG-------------ATCAAAC-AA--------AGGCCTCGATATTGG
droFic1 scf7180000454039:848267-848433 - GTGTGTGAAGATCAAAGAGTGAA--------C--------------AAA------------------TA--CTAGA----------------AGCTCCGAAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAGAA--GACGAC-CAGTA--A------A--------------------------------GTGTT-------------AACTACCAAA--------AGGTCCCGATCCTGG
droKik1 scf7180000302679:89625-89781 - GAGAGTGAGGTA-AG-----------------------------GCAAA------------------GT--GAA----------------G--CTTCGGCAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCAAAAC--GACGAC-CAGCA--A---T--C--------------------------------CAGTG-------------AACCAGC-AA--------AGGTCCCGAACTTGG
droAna3 scaffold_13266:9731078-9731233 + dan-mir-309 Known_mirbase GAGTGTGAAGAGCCGCGAGTTAC-----------------------AAA------------------GT--G----------------------------AAGA-TCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTATAAAAAAGCCGTC-CAGAC--A------T--------------------------------CTGTG-------------AGCCCCCAAC--------TGGCTACGATCTTGG
droBip1 scf7180000396427:874057-874215 + GAGTGTGAAGAGCCGCGAGTTAC-----------------------AAA------------------GT------------------------------GAAAG-CCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAATGAACGTC-CAGAA--A------T--------------------------------CTGTG-------------AATCCTCCGC-----TCCGGGTCACGATCTTGG
dp5 3:12677820-12678015 - dps-mir-309 Known_mirbase GGGTGTGAGGTGCCCGAAGTGAA--------GG-----------AGAA---------------AA-AGA--A-------AGAAAAACAAACTATCTCGGAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA-AGCGAT-CAGCG--AGCG------------------------TCTCAGCGCACATTGTG-------------AACGACG-----ATACCGAGGCAACGATCCTGG
droPer2 scaffold_2:8905645-8905846 + dpe-mir-309 Known_mirbase GGGTGTGAGGTGCCCGAAGTGAA--------GG-----------AGAA---------------AA-AGA--AAA-AGAAAAAAAAACGAACTATCTCGGAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA-AGCGAT-CAGCG--AGCG------------------------TCTCAGCGCACATTGTG-------------AACGACG-----ATACCGAGGCAACGATCCTGG
droWil2 scf2_1100000004514:1652003-1652212 - dwi-mir-3 Known_mirbase A-GTGTAA--------CAGTGAA--------TAGTTCATCTAAGAAAAA------------------CT--CAA----------------TCATTTCAT-ATA--ATATTATATGATAAACTTTGTTCAGTTTTGCAATCAAAAAATCAAGAAAATTCCTT-------AG-CATCACTGGGTGAAGTTTGTCTTATAATCTTTAAAC--TACAAT-CAAAA--T---ACAA--------------TTGGAGTGTTAAAAAAAAAGGAG-------------AGTAATC-GA----ATTTAGACCATGATTTTGG
droVir3 scaffold_12875:4111765-4111964 + dvi-mir-309 Known_mirbase ATGTGTAAGGAACCGGCGCAAAG--------AA-----------G-AA-------------------GC--CC------------------AAT---ATAACAA-ATATTATATGGTAAACTTTGTTCAGTTTTGCC----------------AGGCTCTT-TTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGCAAAAA--GAACAG-CAAAA--A------AAAATAAAAATAAAACAATATTATTAAA---------------TAAAA-----ATACC-AG-AATCTCATAGCTCTGCTTTTGG
droMoj3 scaffold_6496:20937055-20937248 - dmo-mir-309 Known_mirbase GTGTGTAAGGATCG--GAGTGGCACAGTGCATA-----------T--AT------------------AT--ATA----------------TATACA-AGAACAGAATATTATAAGGTAAACTTTGTTCAGTTTTGCC----------------GGGTTCTATGTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGAAACGA--AACAGCAAGGAA--AAAG------------------------TC----------CAGTC---------A---ATTCAAC-GGAACTCTCGCAGCTCTACTTTTGG
droGri2 scaffold_5621:2471-2665 + dgr-mir-309-2 Known_mirbase AAGTGCAAGGATCGCTTAGAGTA--------AC-----------A-GAA--------------ATAAGT--CTAAA-------A--------AATATATAATT--ACATTATATGGCAAACCTTGTTCAGTTTTGAC----------------AACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAATC--GAAAT--G--GAT-CAGCT--A------A--------------------------------AAGTTGTACATAAAAATGC-TTGCC-AA-ATTTTCATAGCTCTGCTTTTGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGTGTGAGGATCTAGTAGTGCA--------AA-----------GC-AA------------------GT--CTTAA----------------AGTTTGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCT--A------A--------------------------------TTGTG-------------AACCACC-AA--------AGGTCCCGATCCTGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA.......................................................................................................................22137772.00377721042115128481930317295197400000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT........................................................................................................................2111373.001373001100374401339260600000
.................................................................................................................CGACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................221406.0040610380100001302000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA......................................................................................................................23148.00480000000018250500000
..................................................................................................................................................................................GGGTAAAGTTTGTCCTA.......................................................................................................................17137.0037000000006310000000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA.......................................................................................................................20136.0036000000002780100000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC.........................................................................................................................20133.0033000000002502600000
................................................................................................................................................................................CTGGGTAAAGTTTGTCCTA.......................................................................................................................19130.00300000000011190000000
.............................................................................................................................................................................................................................................................................................ACC-AA--------AGGTCCCGATCCTG.19129.00290016000000001300000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA.......................................................................................................................21126.0026000100001690000000
...................................................................................................................................................................................GGTAAAGTTTGTCCTA.......................................................................................................................16123.0023000000007160000000
.................................................................................................................CGACAAACCTTGTTCGGTTTT....................................................................................................................................................................................21118.001800000000850500000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC.......................................................................................................................22114.001400000000670100000
....................................................................................................................................................................................GTAAAGTTTGTCCTA.......................................................................................................................15113.0013000000003100000000
............................................................................................................................................................................................................................................................................................CACC-AA--------AGGTCCCGATCCTG.20113.001300900000000400000
.................................................................................................................................................................................TGGGTAAAGTTTGTCCTA.......................................................................................................................18112.001200000000570000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTC..........................................................................................................................19111.0011000001000001000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG.......................................................................................................................2218.00800000000340100000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT.......................................................................................................................2218.00800000000410300000
...........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCCT........................................................................................................................2318.00800200000140100000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT......................................................................................................................2316.00600000000040200000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGT...........................................................................................................................1816.00600000000420000000
..............................................................................................................................................................................................................................................................................................CC-AA--------AGGTCCCGATCCTG.1815.00500500000000000000
..........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGTC..........................................................................................................................2215.00500000000410000000
.................................................................................................................CGACAAACCTTGTTCGGTTTTGT..................................................................................................................................................................................2314.00400200000000200000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT........................................................................................................................1914.00400000000210100000
..........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGTCCTA.......................................................................................................................2514.00400000000310000000
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCTA.......................................................................................................................2314.00400000000310000000
...................................................................................................................................................................................GGTAAAGTTTGTCCT........................................................................................................................1513.00300000000120000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC........................................................................................................................2113.00300000000100200000
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT........................................................................................................................2213.00300000000020100000
................................................................................................................ACGACAAACCTTGTTCGGTTTT....................................................................................................................................................................................2212.00200200000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA........................................................................................................................2112.00200000000110000000
..........................................................................................................................................................................................................................................................................................ACCACC-AA--------AGGTCCCGATCCTG.2211.00100000000000100000
.................................................................................................................CGACAAACCTTGTTCGGTTTTA...................................................................................................................................................................................2211.00100100000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTT..............................................................................................................................1511.00100000000100000000
.................................................................................................................................................................................TGGGTAAAGTTTGTCCT........................................................................................................................1711.00100000000100000000
...........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTC..........................................................................................................................2111.00100000000100000000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTAT......................................................................................................................2211.00100000000010000000
.................................................................................................................CGACAAACCTTGTTCGGT.......................................................................................................................................................................................1811.00100000000010000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG........................................................................................................................2111.00100100000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCTA........................................................................................................................2121.00200000000200000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC......................................................................................................................2311.00100000000000100000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT........................................................................................................................2011.00100000000000100000
droSec2
AAGTGTGAGCATCCAGCAGTGAA--------AA-----------GCAAT------------------GT--CTTAA----------------AGTTTGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCT--A------A--------------------------------TTGTG-------------AATCACC-AA--------AGGTCCCGATCCTGGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA.......................................................................................................................2217841.0078416357493280
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT........................................................................................................................2112496.0024961722371106
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC.........................................................................................................................201146.00146001433
.................................................................................................................CGACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................221106.00106201031
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTC..........................................................................................................................19151.005101491
.............................................................................................................................................................................................................................................................................................ACC-AA--------AGGTCCCGATCCTG.19149.004950440
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA......................................................................................................................23133.003300321
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT......................................................................................................................23124.002400240
............................................................................................................................................................................................................................................................................................CACC-AA--------AGGTCCCGATCCTG.20118.001820142
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT........................................................................................................................22112.001200120
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA.......................................................................................................................20111.001100110
..............................................................................................................................................................................................................................................................................................CC-AA--------AGGTCCCGATCCTG.18111.001110100
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC......................................................................................................................23110.001000100
.................................................................................................................CGACAAACCTTGTTCGGTTTT....................................................................................................................................................................................2118.0080080
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG.......................................................................................................................2217.0070070
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA.......................................................................................................................2114.0043010
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC........................................................................................................................2114.0040040
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT.......................................................................................................................2213.0030030
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC.......................................................................................................................2213.0030030
...........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCCT........................................................................................................................2313.0030030
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCC.........................................................................................................................2113.0030030
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT........................................................................................................................1913.0030030
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT........................................................................................................................2013.0030030
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG........................................................................................................................2113.0031020
.................................................................................................................CGACAAACCTTGTTCGGTTTTGT..................................................................................................................................................................................2312.0020020
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCA.........................................................................................................................2012.0020020
.................................................................................................................CGACAAACCTTGTTCGGTT......................................................................................................................................................................................1912.0020020
.................................................................................................................................................................................TGGGTAAAGTTTGTCCTA.......................................................................................................................1812.0020020
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA........................................................................................................................2112.0020020
...........................................................................................................................................................................................................................................................................................TCACC-AA--------AGGTCCCGATCCTG.2112.0020020
...........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCC.........................................................................................................................2211.0010010
.................................................................................................................CGACAAACCTTGTTCGGTTTTGC..................................................................................................................................................................................2311.0010010
.................................................................................................................CGACAAACCTTGTTCGGT.......................................................................................................................................................................................1811.0010010
..........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGT...........................................................................................................................2111.0010010
..................................................................................................................GACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................2111.0010010
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTAA......................................................................................................................2211.0010010
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCTA........................................................................................................................2121.0020020
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCTC.......................................................................................................................2311.0010010
..........................................................................................................................................................................................................................................................................................ATCACC-AA--------AGGTCCCGATCCTG.2211.0010001
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCC.........................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................AATCACC-AA--------AGGTCCCGATCCTG.2311.0010010
................................................................................................................................................................................CTGGGTAAAGTTTGTCCTA.......................................................................................................................1911.0010010
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCC.........................................................................................................................1911.0010010
............................................................................................................................................................................AGCACTGGGTAAAGTTTGT...........................................................................................................................1911.0010010
.............................................................................................................................................................................GCACTGGGTAAAGTTTGT...........................................................................................................................1811.0010010
dm3
AAGTGTAAGGATCCCGCAGTGAG--------AA-----------GCGAA------------------GT--CTTAA----------------AGTTTGGAATAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCA-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCT--A------A--------------------------------TTGTG-------------AGCCACC-TA--------AGGTCCCGATCCTGGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA.......................................................................................................................221372749.00372749000021172564461000000000000000060051440225181200010300040114040001000000000000000000000001184695024209914266539433475110189032812180016712949112661014102914117105000021300023000000000015031688119323100979702362411111562200000000040311805003514501002803008006210000003000001622020002001212040704401020010000442923611010100100110000166000010001301000019345311151486000007006272737500840231263190101165111022133522114311733139942011030
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT........................................................................................................................21186538.00865380000104392300000000000000001000000001074110100010800000130000200000000000000000000100086338059669620000000520800203140001394230023041750000000000000000000000007035092644536441714010131132010000020000004010010010000000010100150002001000000910040000001104041303505100000001020699201000001011000523100011014016100124441674435803221322162622379142700241431300101815611847212021341151138313002230
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC.........................................................................................................................2015469.0054690000000000000000000000100000000000389700000003060000000000000000000000000000000000004105000000000000000000000000002000000000000000000000000000471291791398900000000000000000000000000000000000000000002100000000000020000000000000102000100000000003629000010000000100201001010000000001800351201010000085524004001000000021002210000300022231280000300
.................................................................................................................CGACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................2214921.00492100000021342000000000000000000012000116000000000000000000000000000000000000000001100074521860626150001020000003103704105812250067926000000000000000000000000050269311301555501000100000000000000007030000201100300000000000000000010001000000000000000000010522126300003728100000000000000000000000000010001000000000000000082600000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA......................................................................................................................2311848.00184800000015200000000000000000000000003600000000010000000100000000000000000000000000001516762414100000100300000000000128500170120000000000000000000000000182112482900010020000000000000000100000000000000000000000000000000000200000000000000000001010000000018100100000000000000000000000000000001020201000000000814100100000000100100000000000000000060000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC.......................................................................................................................2211533.001533000000010000000000000000000000000060000000000000000000000000000000000000000000000143126000000000000000000000300000010000000000000100000000007345359110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010900000000000000000000000000000000000100000000000001311000000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTC..........................................................................................................................1911527.001527000000000000000000000000000000000045500000001000000000000000000000000000000000000008034400000000000000000000040003000000000000000000000000000288475129134000000000000000000000000000000000000000000000000000000000000000000000000000001000000000041400000000000001000000000000000000002000000000000000605600600000000000010010010010000000060000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT......................................................................................................................231970.00970000000240000000000000000000000000014000000000000000000000000000000000000000000000056105940100000000000000000000001000141020000000000000000000000005118128180100000000000000000000000000000000000000000000000000000000000000000100000000000000000000008100000000000000000000000000000000000000000000000000463200000000000000000000000000000000030000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTACTG....................................................................................................................251741.0074100000000000000000000000000000000007390000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG.......................................................................................................................221516.005160000001310000000000000000000000000800000000000000000000000000000000000000000000004952214000000000000010000002100020020000000000000000000000001131471000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001210000000000000000000000000000000000000000000000000373100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACC-TA--------AGGTCCCGATCCTG.191450.0045000000000000000000000000000000000000000000000000000000000000000000000000000000000074805144910000100020000000000990001200400000000000000000000000007000300000000000000000000000000000000000000000000000000000000000000000000001000200010000000000210000000000000000200000000000000000000000000000000134100000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT.......................................................................................................................221438.004380000003310000000000000000000000000000000000000000000000000000000000000000000000002315235000004000000000000002300000010000000000000000000000006625823310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000520000000000000000000000000000000011000001000000000201400000000000000000000000000100100020000010
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC......................................................................................................................231426.0042600000000100000000000000000000000002200000000000000000000000000000000000000000000002737176000000001100000000221200020020000000000000000000000004353226400000000000000000000000000000000000000000000000000000000001000000000000000000000000000000760000000000000000000000000000000000000000000000000211100000000000000000000000000000000030000000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA.......................................................................................................................201360.00360000000000000000000000000000000000010000000000000000000000000000000000000000000000058004000000000000000000000000000000000000000000000000000003362328100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000850000000000000000000000000000000000000000000000000227000000000000000000000000000000000020000000
.................................................................................................................CGACAAACCTTGTTCGGTTTT....................................................................................................................................................................................211334.00334000000000000000000000000000000000010000000000000000000000000000000000000000000000403010000000000000000000000300000070000000000000000000000004910013707100000000000000000000100000000000100000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACC-TA--------AGGTCCCGATCCTG.201276.00276000000260000000000000000000000000040000000000000000000000000000000000000000000000614442370000000000000000000045000122080000000000000000000000001100060000000000000000000000000000000000000000000000000000000000000000000000000010003010000000011000000000000000010000000000000000000000000000000055400000000000000000000000000000000000000010
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC........................................................................................................................211189.001890000000100000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000411137000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000148000000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCA.........................................................................................................................201178.0017800000000000000000000000000000000001770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CC-TA--------AGGTCCCGATCCTG.181137.0013700000000000000000000000000000000000000000000000000000000000000000000000000000000030101772000000000000000000000300004008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000036000000000000000000000000000000000000000000
................................................................................................................................................................................CTGGGTAAAGTTTGTCCTA.......................................................................................................................19192.0092000000000000000000000000000000000000000000000000000000000000000000000000000000000990030000000000000000000000000000000000000000000000000000011412000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT........................................................................................................................19190.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011114000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000011000000000000000000000000000000000000000000000000061000000000000000000000000000000000000000000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA.......................................................................................................................21189.008900000000000000000000000000000000000000000000000000000000000000000000000000000000013102500000000000000000000430002000000000000000000000000000173000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000
.................................................................................................................CGACAAACCTTGTTCGGTTTTT...................................................................................................................................................................................22188.008800000010000000000000000000000000000000000000000000000000000000000000000000000000074401200000000000000000000000000000000000000000000000000000981300000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT........................................................................................................................22172.00720000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000003700000000000000000000000000000000000000000000000000000000000000000000000000000002000000000002000000000000000000000000000000000002000000000000052200000001000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGT...........................................................................................................................18170.0070000000000000000000000000000000000000000000000000000000000000000000000000000000010116100100000000000000000000000001000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000032110000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAG......................................................................................................................23168.006800000000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000002410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000100000000044100000000000000000000000010000000000000000
..................................................................................................................GACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................21163.0063000000020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000061124105000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................CCAGCACTGGGTAAAGTTTGTC..........................................................................................................................22160.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000700010000000000000000000000000000000000000000000000000000011313000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000022100000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTATT.....................................................................................................................24149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000001210500000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCTA.......................................................................................................................23149.004900000001000000000000000000000000000000000000000000000000000000000000000000000000011003300000000000000000000300001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026000000000000000000000000000000000000000000
.................................................................................................................CGACAAACCTTGTTCGGTTT.....................................................................................................................................................................................20148.00480000000000000000000000000000000000420000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTG..........................................................................................................................19138.00380000000000000000000000000000000000380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA........................................................................................................................21137.003700000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000010000000
.................................................................................................................................................................................TGGGTAAAGTTTGTCCTA.......................................................................................................................18135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000003060100000000000000000000020000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000019000000000000000000000000000000000000000000
droEre2
AAGTGTGAGGATCCCGCAGTGAA--------AA-----------GTAAA------------------GT--ATA----------------CGAGTTTGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCC--A------A--------------------------------TTGTG-------------AACCCAC-CA--------AGGTCCTGATCCTGGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA.......................................................................................................................221612.00612141850384110
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT........................................................................................................................211280.0028021710187100
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC.........................................................................................................................20119.00195806000
.............................................................................................................................................................................................................................................................................................CAC-CA--------AGGTCCTGATCCTG.19118.00188109000
.................................................................................................................CGACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................22114.00145207000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC........................................................................................................................21114.001401400000
............................................................................................................................................................................................................................................................................................CCAC-CA--------AGGTCCTGATCCTG.2019.0096102000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA.......................................................................................................................2116.0066000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC.......................................................................................................................2215.0050104000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTC..........................................................................................................................1915.0050104000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA......................................................................................................................2314.0043001000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT........................................................................................................................2014.0044000000
.................................................................................................................CGACAAACCTTGTTCGGTTTT....................................................................................................................................................................................2114.0041101010
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT.......................................................................................................................2213.0031002000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC......................................................................................................................2312.0021100000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAG......................................................................................................................2312.0021001000
..........................................................................................................................................................................................................................................................................................ACCCAC-CA--------AGGTCCTGATCCTG.2212.0021100000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCA........................................................................................................................2112.0020101000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT......................................................................................................................2312.0020002000
................................................................................................................................................................................CTGGGTAAAGTTTGTCCT........................................................................................................................1811.0010100000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGT...........................................................................................................................1811.0011000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTATT.....................................................................................................................2411.0010001000
.................................................................................................................CGACAAACCTTGTTCGGTTTTGT..................................................................................................................................................................................2311.0010001000
...............................................................................................................TACGACAAACCTTGTTCGGTTT.....................................................................................................................................................................................2211.0010100000
...............................................................................................................TACGACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................2411.0010001000
.................................................................................................................CGACAAACCTTGTTCGGTTTTT...................................................................................................................................................................................2211.0010001000
.........................................................................................................................................................................................................................................................................GTG-------------AACCCAC-CA--------AGGTCCTGATCCTG.2611.0011000000
............................................................................................................................................................................................................................................................................................CCAC-CA--------AGGTCCTGATCC...1811.0010100000
.................................................................................................................CGACAAACCTTGTTCGGTTT.....................................................................................................................................................................................2011.0011000000
.....................................................................................................................................................................................TAAAGTTTGTCCTATAATCCCG...............................................................................................................2211.0010001000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG.......................................................................................................................2211.0011000000
...........................................................................................................................................................................................................................................................................................CCCAC-CA--------AGGTCCTGATCCTG.2111.0011000000
..............................................................................................................................................................................................................................................................................................AC-CA--------AGGTCCTGATCCTG.1811.0011000000
droYak3
AAGTGTGATGATCCAGCAGTGAA--------AA-----------CAAAAGTATCAAA----------GC-----AA----------------AGTTTGGAACAG-CAATTATACGACAAACCTTGTTCTGTTTTGCC----------------AATTTCCT-------AGCCAGCACTGGGTAAAGTTTGTCCTATAATCCCGAAAC--GACGAC-CAGCA--G---CCAA--------------------------------GTGTG-------------AACCATC-AA--------AGGTCCTGATCCTGGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA.......................................................................................................................2211191.001191037694180100000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT........................................................................................................................2111020.001020028361800200000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC........................................................................................................................211228.002280022710000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC.........................................................................................................................20194.0094008770000000
.............................................................................................................................................................................................................................................................................................ATC-AA--------AGGTCCTGATCCTG.19181.00810060210000000
.................................................................................................................CGACAAACCTTGTTCTGTTTTG...................................................................................................................................................................................22128.0028002800000000
............................................................................................................................................................................................................................................................................................CATC-AA--------AGGTCCTGATCCTG.20126.0026002330000000
...........................................................................................................................................................................................................................................................................................CCATC-AA--------AGGTCCTGATCCTG.21111.0011001010000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAA......................................................................................................................2318.00800350000000
..............................................................................................................................................................................................................................................................................................TC-AA--------AGGTCCTGATCCTG.1816.00600330000000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA.......................................................................................................................2116.00602400000000
.................................................................................................................CGACAAACCTTGTTCTGTTTTGCC----------------.................................................................................................................................................................2416.00600600000000
.................................................................................................................CGACAAACCTTGTTCTGTTTT....................................................................................................................................................................................2115.00500410000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTC..........................................................................................................................1915.00500230000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTC.......................................................................................................................2214.00400310000000
..........................................................................................................................................................................................................................................................................................ACCATC-AA--------AGGTCCTGATCCTG.2214.00400400000000
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT........................................................................................................................2214.00400310000000
.............................................................................................................TATACGACAAACCTTGTTCTGT.......................................................................................................................................................................................2213.00300300000000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCTA.......................................................................................................................2013.00300210000000
..............................................................................................................ATACGACAAACCTTGTTCTGTT......................................................................................................................................................................................2212.00200200000000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT........................................................................................................................1912.00200200000000
.........................................................................................................................................................................................................................................................................................AACCATC-AA--------AGGTCCTGATCCTG.2312.00200200000000
.................................................................................................................CGACAAACCTTGTTCTGTTT.....................................................................................................................................................................................2012.00200200000000
................................................................................................................ACGACAAACCTTGTTCTGTTTTGCC----------------.................................................................................................................................................................2512.00200200000000
.................................................................................................................CGACAAACCTTGTTCTGT.......................................................................................................................................................................................1812.00200110000000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT........................................................................................................................2012.00200200000000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCC........................................................................................................................1912.00200200000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT.......................................................................................................................2212.00200110000000
..............................................................................................................ATACGACAAACCTTGTTCTGTC......................................................................................................................................................................................2211.00100100000000
...............................................................................................................TACGACAAACCTTGTTCTGTTTT....................................................................................................................................................................................2311.00100100000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG........................................................................................................................2111.00100100000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAC......................................................................................................................2311.00100100000000
....................................................................................................................................................................................GTAAAGTTTGTCCTATAATCC.................................................................................................................2111.00100100000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTCC......................................................................................................................2311.00100100000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT......................................................................................................................2311.00100000010000
............................................................................................................................................................................................................................................................................................CATC-AA--------AGGTCCTGATCCC..1911.00100100000000
...........................................................................................................................................................................................................................................................................................CCATC-AA--------AGGTCCTGATCCT..2011.00100100000000
...................................................................................................................................................................................................TAATCCCGAAAC--GACGAC-CAGCA--G---C......................................................................................2511.00100100000000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTG.......................................................................................................................2211.00100010000000
...............................................................................................................TACGACAAACCTTGTTCTGTTTTGC..................................................................................................................................................................................2511.00100100000000
.........................................................................................................................................................................................................................................................................................AACCATC-AA--------AGGTCCTGATCC...2111.00100100000000
................................................................................................................................................................T-------AGCCAGCACTGGGTAAAGTTTGTCCTA.......................................................................................................................2811.00100100000000
.............................................................................................................TATACGACAAACCTTGTTCTGC.......................................................................................................................................................................................2211.00100100000000
.................................................................................................................CGACAAACCTTGTTCTGTTTTGT..................................................................................................................................................................................2311.00100100000000
...........................................................................................................................................................................CAGCACTGGGTAAAGTTTGTCCC........................................................................................................................2311.00100100000000
................................................................................................................................................................................CTGGGTAAAGTTTGTCCTA.......................................................................................................................1911.00100100000000
.................................................................................................................CGACAAACCTTGTTCTGTTTTGC..................................................................................................................................................................................2311.00100100000000
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCC........................................................................................................................2011.00100100000000
.................................................................................................................................................................................TGGGTAAAGTTTGTCCTA.......................................................................................................................1811.00100100000000
............................................................................................................................................................................................................................................................................................CATC-AA--------AGGTCCTGATCC...1811.00100100000000
.................................................................................................................CGACAAACCTTGTTCTGC.......................................................................................................................................................................................1830.33100100000000
droEug1
GGATGTGAAGATCAAGCAGTGAA--------AA-----------C-AAA------------------------A----------------TCAGTTCGGAACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTGCT-------AGTCAGCACTGGGTAAAGTTTGTCCTATAATCCCGATAA--TACAAC-CAGCT--A------A--------------------------------TAGTG-------------AATCTACCAA-----A-ACGGTCCCGATCCTGGSizeHit CountTotal NormTotal
No Reads
droBia1
GAGTGTGACGATCCAGCAGTGAA--------A--------------GAA------------------GT--AAA----------------TCAGCTCGGGACAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAA--GACGAC-CAGCA--A------A--------------------------------GTGTG-------------AAGCACCCGA--------AGGTCCCGATCCTGGSizeHit CountTotal NormTotal
No Reads
droTak1
GAGTGTGAGGATCCAGCAGTGAA--------AA-------------AAA------------------GT--AAA----------------ACAGTTCGGAACAG-TAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAA--GACGAC-CAGCT--T------A--------------------------------TTGTG-------------AACCAACCAA--------AGGTCTCGATCTTGGSizeHit CountTotal NormTotal
No Reads
droEle1
GAGTGTGAGGATCCAGCAGTGAA--------AC-----------ATAGA---TCAAAGCAGCAA---GCAACTCGA----------------A----GGAAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAA--GACGAC-CATCTCGA------A--------------------------------CAGTG-------------AATTATCGAA--------AGGCCCCGATCTTGGSizeHit CountTotal NormTotal
No Reads
droRho1
GAGTATGAGGATCCAGCAGTGAA--------CC-----------AAAAA------------------GT--AAA----------------TAAGCTCGGAAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCA----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTTGAAAA--GACGAC-CAGCT--A------A--------------------------------CTGTG-------------ATCAAAC-AA--------AGGCCTCGATATTGGSizeHit CountTotal NormTotal
No Reads
droFic1
GTGTGTGAAGATCAAAGAGTGAA--------C--------------AAA------------------TA--CTAGA----------------AGCTCCGAAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAGAA--GACGAC-CAGTA--A------A--------------------------------GTGTT-------------AACTACCAAA--------AGGTCCCGATCCTGGSizeHit CountTotal NormTotal
No Reads
droKik1
GAGAGTGAGGTA-AG-----------------------------GCAAA------------------GT--GAA----------------G--CTTCGGCAAAG-CAATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCAAAAC--GACGAC-CAGCA--A---T--C--------------------------------CAGTG-------------AACCAGC-AA--------AGGTCCCGAACTTGGSizeHit CountTotal NormTotal
No Reads
droAna3
GAGTGTGAAGAGCCGCGAGTTAC-----------------------AAA------------------GT--G----------------------------AAGA-TCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTATAAAAAAGCCGTC-CAGAC--A------T--------------------------------CTGTG-------------AGCCCCCAAC--------TGGCTACGATCTTGGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTA.......................................................................................................................221207.002072492741025
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCT........................................................................................................................211150.00150157948512
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCC........................................................................................................................21119.00190190000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCC.........................................................................................................................20115.00150132000
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCCT........................................................................................................................2217.007051100
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCTA.......................................................................................................................2114.004310000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAT......................................................................................................................2313.003012000
....................................................................................................................CAAACCTTGTTCGGTTTTGC..................................................................................................................................................................................2012.002010100
..............................................................................................................................................................................CACTGGGTAAAGTTTGTCCT........................................................................................................................2012.002200000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGT...........................................................................................................................1811.001010000
.................................................................................................................CGACAAACCTTGTTCGGTTTT....................................................................................................................................................................................2111.001001000
.............................................................................................................................................................................................................................................................................................CCCAAC--------TGGCTACGATCTTG.2011.001010000
..............................................................................................................................................................................................................................................................................................CCAAC--------TGGCTACGATCTTG.1911.001001000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTT.......................................................................................................................2211.001001000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCTAG......................................................................................................................2311.001010000
............................................................................................................................................................................AGCACTGGGTAAAGTTTGTCC.........................................................................................................................2111.001001000
.................................................................................................................CGACAAACCTTGTTCGGTTTTT...................................................................................................................................................................................2211.001001000
..............................................................................................................ATACGACAAACCTTGTTCGGTT......................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGC...........................................................................................................................1811.001010000
...............................................................................................................................................................................ACTGGGTAAAGTTTGTCCT........................................................................................................................1911.001010000
.............................................................................................................................................................................GCACTGGGTAAAGTTTGTCCG........................................................................................................................2111.001010000
.................................................................................................................CGACAAACCTTGTTCGGTTTTG...................................................................................................................................................................................2211.001000001
................................................................................................................ACGACAAACCTTGTTCGGTTT.....................................................................................................................................................................................2111.001010000
droBip1
GAGTGTGAAGAGCCGCGAGTTAC-----------------------AAA------------------GT------------------------------GAAAG-CCATTATACGACAAACCTTGTTCGGTTTTGCC----------------AATTTCCT-------AG-CAGCACTGGGTAAAGTTTGTCCTATAATCTCGAAAATGAACGTC-CAGAA--A------T--------------------------------CTGTG-------------AATCCTCCGC-----TCCGGGTCACGATCTTGGSizeHit CountTotal NormTotal
No Reads
dp5
GGGTGTGAGGTGCCCGAAGTGAA--------GG-----------AGAA---------------AA-AGA--A-------AGAAAAACAAACTATCTCGGAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA-AGCGAT-CAGCG--AGCG------------------------TCTCAGCGCACATTGTG-------------AACGACG-----ATACCGAGGCAACGATCCTGGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTA.......................................................................................................................2212449.00244907712400113200000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTT........................................................................................................................211480.00480025295015901000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAA......................................................................................................................231166.00166075909802000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCT.........................................................................................................................20139.003906290400000
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTT........................................................................................................................22135.003501260800000
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTTA.......................................................................................................................23117.00170280700000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTC........................................................................................................................21116.001600150100000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTT.......................................................................................................................22113.00130130900000
.................................................................................................................CGATAAACTTTGTTCAGTTTTG...................................................................................................................................................................................22112.00120350400000
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTCT.........................................................................................................................21111.00110170300000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAT......................................................................................................................23110.00100140500000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAC......................................................................................................................2319.0090030600000
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTA.......................................................................................................................2118.0080710000000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCC.........................................................................................................................2018.0080080000000
................................................................................................................ACGATAAACTTTGTTCAGTTTT....................................................................................................................................................................................2217.0070150100000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTC.......................................................................................................................2216.0060060000000
......................................................................................................................................................................................................................................................................................................TACCGAGGCAACGATCCTG.1915.0050010400000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTG.......................................................................................................................2215.0050000500000
.................................................................................................................CGATAAACTTTGTTCAGTTTT....................................................................................................................................................................................2115.0050030200000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTC..........................................................................................................................1914.0040040000000
...............................................................................................................TACGATAAACTTTGTTCAGTTTT....................................................................................................................................................................................2313.0030030000000
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCTT........................................................................................................................2013.0030210000000
................................................................................................................ACGATAAACTTTGTTCAGTTTC....................................................................................................................................................................................2212.0020020000000
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTA.......................................................................................................................2012.0020020000000
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTAT......................................................................................................................2212.0020010100000
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTCC.........................................................................................................................2112.0020020000000
...............................................................................................................................................................................................................................................................................................G-----ATACCGAGGCAACGATCCTG.2111.0010000100000
.......................................................................................................................................................................................................................................................................................................ACCGAGGCAACGATCCTG.1811.0010000100000
................................................................................................................................................................................CTGGGTGAAGTTTGTCTTA.......................................................................................................................1911.0010100000000
...............................................................................................................TACGATAAACTTTGTTCAGTTT.....................................................................................................................................................................................2211.0010010000000
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTC..........................................................................................................................2011.0010010000000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAAG.....................................................................................................................2411.0010010000000
.................................................................................................................CGATAAACTTTGTTCAGTTT.....................................................................................................................................................................................2011.0010000000010
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTCA......................................................................................................................2311.0010000100000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTATT.....................................................................................................................2411.0010010000000
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTTT.......................................................................................................................2311.0010010000000
.....................................................................................................................................................................................................................................................................................................ATACCGAGGCAACGATCCTG.2011.0010010000000
.................................................................................................................CGATAAACTTTGTTCAGTTTTGT..................................................................................................................................................................................2311.0010010000000
................................................................................................................................................................................CTGGGTGAAGTTTGTCTTAA......................................................................................................................2011.0010010000000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTG........................................................................................................................2111.0010010000000
..................................................................................................................GATAAACTTTGTTCAGTTTTG...................................................................................................................................................................................2111.0010100000000
.................................................................................................................CGATAAACTTTGTTCAGTTTTGC..................................................................................................................................................................................2311.0010010000000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTCC......................................................................................................................2311.0010000100000
droPer2
GGGTGTGAGGTGCCCGAAGTGAA--------GG-----------AGAA---------------AA-AGA--AAA-AGAAAAAAAAACGAACTATCTCGGAA----CTATTATACGATAAACTTTGTTCAGTTTTGCC----------------AACTTGCT-------TG-CAGCACTGGGTGAAGTTTGTCTTATAATCCCACAGTA-AGCGAT-CAGCG--AGCG------------------------TCTCAGCGCACATTGTG-------------AACGACG-----ATACCGAGGCAACGATCCTGGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTA.......................................................................................................................221207.0020715101710101
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTT........................................................................................................................21148.00486138021
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAA......................................................................................................................23123.00230218021
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCT.........................................................................................................................2015.005102020
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTCTT........................................................................................................................2215.005113000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTT.......................................................................................................................2212.002002000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTAT......................................................................................................................2312.002001010
.................................................................................................................CGATAAACTTTGTTCAGTTTTG...................................................................................................................................................................................2212.002002000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTC..........................................................................................................................1911.001001000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTA........................................................................................................................2111.001001000
............................................................................................................................................................................AGCACTGGGTGAAGTTTGTCT.........................................................................................................................2111.001001000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTG.......................................................................................................................2211.001001000
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTA.......................................................................................................................2011.001001000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCC.........................................................................................................................2011.001100000
.................................................................................................................CGATAAACTTTGTTCAGTTTT....................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................GCACTGGGTGAAGTTTGTCTTC.......................................................................................................................2211.001000010
droWil2
A-GTGTAA--------CAGTGAA--------TAGTTCATCTAAGAAAAA------------------CT--CAA----------------TCATTTCAT-ATA--ATATTATATGATAAACTTTGTTCAGTTTTGCAATCAAAAAATCAAGAAAATTCCTT-------AG-CATCACTGGGTGAAGTTTGTCTTATAATCTTTAAAC--TACAAT-CAAAA--T---ACAA--------------TTGGAGTGTTAAAAAAAAAGGAG-------------AGTAATC-GA----ATTTAGACCATGATTTTGGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTA.......................................................................................................................22112777.001277712601273515
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAA......................................................................................................................2313479.00347904034705
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTT........................................................................................................................2111173.00117308011650
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTA.......................................................................................................................20191.0091000910
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAT......................................................................................................................23172.0072010710
.............................................................................................................................................................CCTT-------AG-CATCACTGGGTGAAG................................................................................................................................21147.0047000470
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTT.......................................................................................................................22135.0035000350
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCTTAA......................................................................................................................21126.0026000260
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAC......................................................................................................................23123.0023000230
................................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTTG............................................................................................................................22120.0020000200
..................................................................................................................................................................................................................................................................................................A----ATTTAGACCATGATTTTG.19119.0019010180
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTA.......................................................................................................................21119.0019040150
.............................................................................................................................................................CCTT-------AG-CATCACTGGGTGAAGT...............................................................................................................................22118.0018000180
.................................................................................................................TGATAAACTTTGTTCAGTTTT....................................................................................................................................................................................21114.0014000140
.....................................................................................................................AAACTTTGTTCAGTTTTGCAA................................................................................................................................................................................21113.0013000130
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAG......................................................................................................................23112.0012000120
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTG.......................................................................................................................22112.0012000120
................................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTTGC...........................................................................................................................23110.0010000100
.......................................................................................................................................................................................................................................................................................................ATTTAGACCATGATTTTG.18110.0010000100
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAAT.....................................................................................................................24110.0010000100
................................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTTGT...........................................................................................................................2319.00901080
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCT.........................................................................................................................2018.00800080
.....................................................................................................................AAACTTTGTTCAGTTTTGCAAT...............................................................................................................................................................................2218.00800080
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTA........................................................................................................................2117.00700070
....................................................................................................................TAAACTTTGTTCAGTTTTGCAA................................................................................................................................................................................2217.00700070
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCTT........................................................................................................................1917.00700070
...............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTG............................................................................................................................2317.00700070
.................................................................................................................TGATAAACTTTGTTCAGTTTTG...................................................................................................................................................................................2216.00601050
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCTTAA......................................................................................................................2216.00600060
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCT.........................................................................................................................2115.00500050
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTATA.....................................................................................................................2415.00500050
....................................................................................................................TAAACTTTGTTCAGTTTTGCA.................................................................................................................................................................................2114.00401030
...............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTGT...........................................................................................................................2414.00400040
...............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTT..............................................................................................................................2114.00400040
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAAG.....................................................................................................................2414.00400040
.........................................................................................................................TTTGTTCAGTTTTGCAATCAAA...........................................................................................................................................................................2213.00300030
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAAC.....................................................................................................................2413.00300030
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCTT........................................................................................................................2213.00300030
.....................................................................................................................AAACTTTGTTCAGTTTTGCAATC..............................................................................................................................................................................2313.00300030
........................................................................................................................................................................AG-CATCACTGGGTGAAGTTTG............................................................................................................................2113.00300030
................................................................................................................................................................................CTGGGTGAAGTTTGTCTTAA......................................................................................................................2013.00300030
.........................................................................................................................TTTGTTCAGTTTTGCAATCAA............................................................................................................................................................................2113.00301020
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTC..........................................................................................................................1913.00300030
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTTA......................................................................................................................2312.00200020
................................................................................................................ATGATAAACTTTGTTCAGTTTT....................................................................................................................................................................................2212.00200020
.................................................................................................................TGATAAACTTTGTTCAGTTTTGT..................................................................................................................................................................................2312.00200020
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTGA......................................................................................................................2312.00200020
.................................................................................................................................................................................TGGGTGAAGTTTGTCTTA.......................................................................................................................1812.00200020
............................................................................................................................................................TCCTT-------AG-CATCACTGGGTGAAGT...............................................................................................................................2312.00200020
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCTTT.......................................................................................................................2311.00100010
................................................................................................................................................................T-------AG-CATCACTGGGTGAAGT...............................................................................................................................1911.00100010
...............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTGA...........................................................................................................................2411.00100010
.........................................................................................................................TTTGTTCAGTTTTGCAATCAAAAA.........................................................................................................................................................................2411.00100010
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCTT........................................................................................................................2011.00101000
.......................................................................................................................................CAATCAAAAAATCAAGAAAATTCCTT-------..................................................................................................................................................2611.00100010
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTC.......................................................................................................................2211.00100010
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTTAGC.....................................................................................................................2411.00100010
.............................................................................................................................................................................TCACTGGGTGAAGTTTGA...........................................................................................................................1811.00100010
........................................................................................................................CTTTGTTCAGTTTTGCAATCA.............................................................................................................................................................................2111.00100010
.....................................................................................................................................................AGAAAATTCCTT-------AG-CATCACTGGGTGA..................................................................................................................................2711.00100010
........................................................................................................................................................................AG-CATCACTGGGTGAAGTTTGTC..........................................................................................................................2311.00100010
...............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTTGC...........................................................................................................................2411.00100010
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTC..........................................................................................................................2011.00100010
............................................................................................................................................................TCCTT-------AG-CATCACTGGGTGAAGTTTGTC..........................................................................................................................2811.00100010
.........................................................................................................................................ATCAAAAAATCAAGAAAATTCCTT-------AG-C..............................................................................................................................................2711.00100010
.............................................................................................................................................................................TCACTGGGTGAAGTTTGT...........................................................................................................................1811.00100010
..............................................................................................................................................................CTT-------AG-CATCACTGGGTGAAG................................................................................................................................2011.00100010
................................................................................................................................................................T-------AG-CATCACTGGGTGAAGTT..............................................................................................................................2011.00100010
.............................................................................................................................................................CCTT-------AG-CATCACTGGGTGA..................................................................................................................................1911.00100010
.........................................................................................................................TTTGTTCAGTTTTGCAATC..............................................................................................................................................................................1911.00100010
...............................................................................................................................................................TT-------AG-CATCACTGGGTGAAGTTT.............................................................................................................................2211.00100010
................................................................................................................................................................T-------AG-CATCACTGGGTGAAGTTT.............................................................................................................................2111.00100010
.........................................................................................................................TTTGTTCAGTTTTGCAAT...............................................................................................................................................................................1811.00100010
.............................................................................................................................................................CCTT-------AG-CATCACTGGGTGAA.................................................................................................................................2011.00100010
.....................................................................................................................AAACTTTGTTCAGTTTTGCA.................................................................................................................................................................................2011.00100010
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTTA.........................................................................................................................2020.50100010
droVir3
ATGTGTAAGGAACCGGCGCAAAG--------AA-----------G-AA-------------------GC--CC------------------AAT---ATAACAA-ATATTATATGGTAAACTTTGTTCAGTTTTGCC----------------AGGCTCTT-TTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGCAAAAA--GAACAG-CAAAA--A------AAAATAAAAATAAAACAATATTATTAAA---------------TAAAA-----ATACC-AG-AATCTCATAGCTCTGCTTTTGGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTA.......................................................................................................................22119425.0019425004546600000002110664110000000101102202289043365814141185202058906690320287108226365931121816110282947130001491511117300100789374377225251
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGT........................................................................................................................2111582.001582001437000000001300000000000000100115131345133000002118352916335181064400042311300010675010000611501494835
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAA......................................................................................................................2311459.001459201135000000001200000000000010000003906068195960000373567147457272210757000529500000432900000125162288
.................................................................................................................TGGTAAACTTTGTTCAGTTTTG...................................................................................................................................................................................221454.004540002000000000000000000000000000046020671041490000313601001000000001100000221200000074058
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAT......................................................................................................................231247.002470019100000000000000000000000000000066122000006677711427230000424000001240000008111030
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTC.......................................................................................................................221239.00239100380000000001000000100000001000000030000001562427614177435000193100000321000001090000
......................................................................................................................................................................................................................................................................................................TCTCATAGCTCTGCTTTTG.191123.0012300020000000000000000000000000000130920146100000110000000000000000000001100000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCG.........................................................................................................................20176.007600023000000000000000000000000000100414200000541322011000000070000200200000014402
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGC........................................................................................................................21165.006500062000000000000000000000000000000200000000000000000000000000000000100000000000
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTA.......................................................................................................................20157.0057000500000000050000000000000000001046105000000000000000000000200000000000000010000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATT.....................................................................................................................24149.004900015000000000000000000000000000000010000000328743100200000000000001000000000110
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAC......................................................................................................................23146.004600027000000000000000000000000000000000000000053501101000000020000000000000000001
.....................................................................................................................................................................................................................................................................................................ATCTCATAGCTCTGCTTTTG.20145.0045000000000000010000000000000000003031321900001200000000000000000000001000000000000
.......................................................................................................................................CC----------------AGGCTCTT-TTTGTGCG-CA.............................................................................................................................................20129.00290000000000000000000000000000000040239800000010000000000000010000000000100000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTT.......................................................................................................................22129.00290009000000000000000000000000000000100100000012202311010000020000000200000000010
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGTA.......................................................................................................................23121.002100010000000000000000000000000000000100100000111000000001000020000000100000010001
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGT........................................................................................................................22120.00200005000000000000000000000000000010002100000100101000000000030000010100000030000
.......................................................................................................................................CC----------------AGGCTCTT-TTTGTGCG-CATCACTGGGTGAAGTTTGTCGTA.......................................................................................................................42117.001700000000000000000000000000000000000000000001160000000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTG.......................................................................................................................22117.00170002000000001000000000000000000000111000000100100001000000070000000000000000010
.......................................................................................................................................................................................................................................................................................................CTCATAGCTCTGCTTTTG.18113.00130000000000000000000000000000000010211500002010000000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAG......................................................................................................................23112.00120003000000000000000000000000000000101000000100111000000000010000000100000000001
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATA.....................................................................................................................24112.00120001000000000000000000000000000000020000000130001000000000110000000100000000001
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAC.....................................................................................................................2418.0080000000000000000000000000000000000000000001210111000100000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTCA......................................................................................................................2318.0080000000000000000000000000000000000003000000010000000000000040000000000000000000
.................................................................................................................TGGTAAACTTTGTTCAGTTTT....................................................................................................................................................................................2118.0080000000000000000000000000000000000033100000000000000000000000000000000000010000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATC.....................................................................................................................2418.0080002000000000000000000000000000000000000000000130010000000010000000000000000000
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCGTA.......................................................................................................................2117.0070002000000000100000000000000000000101100000000000000000000010000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAT.....................................................................................................................2417.0070002000000000000000000000000000000001000000001000000000000020000001000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAG.....................................................................................................................2417.0070001000000000000000000000000000000001100000111000000000000000000000000000000100
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTC..........................................................................................................................1917.0070000000000000000000000000000000000110000000100110010000000000000000000000010000
....................................................................................................................................................................................................................................................................................................AATCTCATAGCTCTGCTTTTG.2115.0050000000000000000000000000000000000000300001000000000000000000000000100000000000
.................................................................................................................TGGTAAACTTTGTTCAGTTTTGC..................................................................................................................................................................................2315.0050003000000000000000000000000000000000000001100000000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATTT....................................................................................................................2515.0050000000000000000000000000000000000000000000010001010000000110000000000000000000
.................................................................................................................................................................................TGGGTGAAGTTTGTCGTA.......................................................................................................................1815.0050001000000000000000000000000000010001000000000000000000000020000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATAA....................................................................................................................2515.0050000000000000000000000000000000000000000000020010001000000010000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGG........................................................................................................................2115.0050004000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................TGGTAAACTTTGTTCAGTTT.....................................................................................................................................................................................2014.0040000000000000000000000000000000000001000000110000000000000000000000000000000010
.............................................................................................................................................................................TCACTGGGTGAAGTTTGT...........................................................................................................................1814.0040000000000000000000000000000000000010100000020000000000000000000000000000000000
.................................................................................................................TGGTAAACTTTGTTCAGTTTTGCC----------------.................................................................................................................................................................2413.0030001000000000000000000000000000000000000000100001000000000000000000000000000000
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTAA......................................................................................................................2113.0030000000000000000000000000000000000101000000000000000000000010000000000000000000
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCG.........................................................................................................................2113.0030001000000000000000000000000000000000000000000000000000000010000000000000000001
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTCC......................................................................................................................2312.0020000000000000000000000000000000000000000000100000000000000010000000000000000000
.......................................................................................................................................................................................................................................................................................................CTCATAGCTCTGCTTT...1612.0020000000000000000000000000000000000000000000110000000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAACC....................................................................................................................2512.0020000000000000000000000000000000000000000000001100000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAATC....................................................................................................................2512.0020000000000000000000000000000000000000000000000200000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATG.....................................................................................................................2412.0020001000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................CTGGGTGAAGTTTGTCGTA.......................................................................................................................1912.0020000000000000000000000000000000000010100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CC-AG-AATCTCATAGCTCTGCTTTTG.2512.0020000000000000000000000000000000000000100000000000000000000000000000100000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTTA......................................................................................................................2311.0010000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGAC.......................................................................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
................................A-----------G-AA-------------------GC--CC------------------AAT---ATAACAA-AT...............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................AGGCTCTT-TTTGTGCG-CA.............................................................................................................................................1811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCT.........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTGC......................................................................................................................2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
GTGTGTAAGGATCG--GAGTGGCACAGTGCATA-----------T--AT------------------AT--ATA----------------TATACA-AGAACAGAATATTATAAGGTAAACTTTGTTCAGTTTTGCC----------------GGGTTCTATGTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGAAACGA--AACAGCAAGGAA--AAAG------------------------TC----------CAGTC---------A---ATTCAAC-GGAACTCTCGCAGCTCTACTTTTGGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTA.......................................................................................................................22116785.00167855234933144214
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGT........................................................................................................................2113875.00387572912235685
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTC.......................................................................................................................221620.00620240105770
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGC........................................................................................................................211584.0058400005840
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAA......................................................................................................................231540.005400162003771
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAT......................................................................................................................231347.00347020003270
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCG.........................................................................................................................201153.00153128111220
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAC......................................................................................................................23177.00770100760
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTT.......................................................................................................................22164.00640500590
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTA.......................................................................................................................20148.004803000180
...................................................................................................................GTAAACTTTGTTCAGTTTTGCC----------------.................................................................................................................................................................22134.00340000340
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCGTA.......................................................................................................................21123.00230000230
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGT........................................................................................................................22121.00210100200
......................................................................................................................................................................................................................................................................................................TCTCGCAGCTCTACTTTTG.19113.0013070060
.....................................................................................................................................................................................................................................................................................................CTCTCGCAGCTCTACTTTTG.20111.0011050060
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGG........................................................................................................................21111.00110000110
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATT.....................................................................................................................24111.00110000110
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCG.........................................................................................................................21110.0010020080
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCGT........................................................................................................................19110.0010040060
...................................................................................................................GTAAACTTTGTTCAGTTTTGC..................................................................................................................................................................................2119.009000090
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATC.....................................................................................................................2419.009000090
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTC..........................................................................................................................1919.009010080
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGC........................................................................................................................2219.009000090
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTG.......................................................................................................................2218.008040040
.......................................................................................................................................CC----------------GGGTTCTATGTTGTGCG-CA.............................................................................................................................................2118.008050030
................................................................................................................................................................................CTGGGTGAAGTTTGTCGTA.......................................................................................................................1917.007000070
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGA........................................................................................................................2117.007000070
.................................................................................................................................................................................TGGGTGAAGTTTGTCGTA.......................................................................................................................1817.007020050
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATA.....................................................................................................................2416.006010050
....................................................................................................................................................................................................................................................................................................ACTCTCGCAGCTCTACTTTTG.2115.005000050
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGAC.......................................................................................................................2215.005000050
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAG......................................................................................................................2315.005030020
.......................................................................................................................................CC----------------GGGTTCTATGTTGTGCG-C..............................................................................................................................................2015.005000050
.................................................................................................................AGGTAAACTTTGTTCAGTTTTG...................................................................................................................................................................................2215.005030020
.................................................................................................................AGGTAAACTTTGTTCAGTTTT....................................................................................................................................................................................2114.004020020
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCGT........................................................................................................................2014.004000040
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTC........................................................................................................................2113.003010020
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTAAT.....................................................................................................................2413.003010020
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTCA......................................................................................................................2313.003030000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGGC.......................................................................................................................2213.003010020
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGTC.......................................................................................................................2313.003000030
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCGTA.......................................................................................................................2313.003010020
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTC.......................................................................................................................2012.002020000
................................................................................................................AAGGTAAACTTTGTTCAGTTTT....................................................................................................................................................................................2212.002020000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCTA........................................................................................................................2112.002000020
............................................................................................................................................................................ATCACTGGGTGAAGTTTGTCT.........................................................................................................................2112.002000020
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCAC........................................................................................................................2112.002000020
.......................................................................................................................................................................................................................................................................................................CTCGCAGCTCTACTTTTG.1812.002010010
..............................................................................................................................................................................CACTGGGTGAAGTTTGTCGTC.......................................................................................................................2112.002100010
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTTA......................................................................................................................2312.002020000
.............................................................................................................................................................................TCACTGGGTGAAGTTTGT...........................................................................................................................1812.002000020
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCC.........................................................................................................................2012.002000020
.............................................................................................................................................................................TCACTGGGTGAAGTTTGTCGTATG.....................................................................................................................2412.002000020
.................................................................................................................AGGTAAACTTTGTTCAGTTTTGC..................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................ACTGGGTGAAGTTTGTCGTAA......................................................................................................................2111.001010000
droGri2
AAGTGCAAGGATCGCTTAGAGTA--------AC-----------A-GAA--------------ATAAGT--CTAAA-------A--------AATATATAATT--ACATTATATGGCAAACCTTGTTCAGTTTTGAC----------------AACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAATC--GAAAT--G--GAT-CAGCT--A------A--------------------------------AAGTTGTACATAAAAATGC-TTGCC-AA-ATTTTCATAGCTCTGCTTTTGGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 10:26 PM