ID:

dsi-mir-303

 Coordinate:

x:3955099-3955184 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.6 -23.5

Flybase annnotation

utr3 [utr3_minus_9915]

No Repeatable elements found

Sense Strand Reads

TAAATATTAATAGTATAATTCCGCGCGCTGCATCATTGTGTTAAAAACCAATGTGATCTCTTGCTTTGGCATTAAAGGAAGCTAGTTTAATTACGAAAACTAGTTTCCTCTAACGTTTCAAACAATACATCATGTGTCGTCGCATCGATGAATTATTAGCAATATTCATTAATTTTTCATTTCACT

**************************************************(((((((...(((.((((((.(((.(((((((((((((........))))))))))))).))).))..)))))))...)))))))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009

testis

 O001

Testis

 SRR618934

dsim w501 ovaries

 O002

Head

 M024

male body		 SRR902008

ovaries

 SRR553488

RT_0-2 hours eggs

 SRR553487

NRT_0-2 hours eggs

 SRR553485

Chicharo_3 day-old ovaries

 GSM343915

embryo

 M053

female body

 SRR553486

Makindu_3 day-old ovaries

 M025

embryo

 M023

head
.................................................................TTGGCATTAAAGGAAGCTAGTT................................................................................................... 22 0 1 8279.00 8279 6265 883 1072 15 5 13 7 8 6 1 2 2 0 0
.................................................................TTGGCATTAAAGGAAGCTAG..................................................................................................... 20 0 1 2526.00 2526 2125 364 26 7 3 1 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGT.................................................................................................... 21 0 1 614.00 614 226 221 159 2 2 0 0 0 2 1 0 0 0 1
.................................................................TTGGCATTAAAGGAAGCTA...................................................................................................... 19 0 1 538.00 538 203 250 81 4 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTT.................................................................................................. 23 0 1 531.00 531 294 197 37 3 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTA................................................................................................... 22 1 1 256.00 256 256 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAT..................................................................................................... 20 1 1 156.00 156 156 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGC........................................................................................................ 17 0 1 141.00 141 0 0 141 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTA.................................................................................................. 23 1 1 117.00 117 93 0 23 0 0 0 0 0 0 1 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCT....................................................................................................... 18 0 1 71.00 71 2 56 13 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATTAAAGGAAGCTAGTT................................................................................................... 17 0 1 64.00 64 0 0 64 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGA.................................................................................................... 21 1 1 38.00 38 38 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTAA................................................................................................. 24 1 1 37.00 37 21 0 14 0 0 0 1 0 0 0 0 1 0 0
.................................................................TTGGCATTAAAGGAAGCTTTT.................................................................................................... 21 2 1 31.00 31 31 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGAA................................................................................................... 22 2 1 26.00 26 25 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGGCATTAAAGGAAGCTAGTT................................................................................................... 21 0 1 25.00 25 14 6 5 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGTTTCCTCTAACGTTTCA.................................................................. 21 0 1 25.00 25 4 18 1 0 2 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTTT..................................................................................................... 20 2 3 25.00 75 75 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTAA.................................................................................................. 23 2 1 23.00 23 23 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTATT.................................................................................................... 21 1 1 16.00 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGGCATTAAAGGAAGCTAGTTT.................................................................................................. 22 0 1 16.00 16 3 5 8 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTAAAGGAAGCTAGTT................................................................................................... 16 0 1 15.00 15 0 0 15 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGTTTCCTCTAACGTTTCAA................................................................. 22 0 1 15.00 15 2 11 0 0 1 0 0 1 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTAAA................................................................................................ 25 1 1 14.00 14 1 0 13 0 0 0 0 0 0 0 0 0 0 0
....................................................................GCATTAAAGGAAGCTAGTT................................................................................................... 19 0 1 14.00 14 0 0 14 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTT...................................................................................................... 19 1 1 13.00 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAA..................................................................................................... 20 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGTTTCCTCTAACGTT..................................................................... 18 0 1 11.00 11 0 11 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTAT.................................................................................................. 23 1 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGGCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 9.00 9 1 0 8 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAG......................................................................................................... 16 0 1 7.00 7 0 0 7 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTATTT................................................................................................... 22 1 1 6.00 6 5 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTG................................................................................................... 22 1 1 6.00 6 5 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGCATTAAAGGAAGCTAGTT................................................................................................... 20 0 1 6.00 6 3 0 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAA.......................................................................................................... 15 0 1 6.00 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGTTTCCTCTAACGTTTCAAA................................................................ 23 0 1 6.00 6 2 1 0 0 0 0 0 1 0 0 0 0 2 0
......................................................................ATTAAAGGAAGCTAGT.................................................................................................... 16 0 1 6.00 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGGCATTAAAGGAAGCTAGT.................................................................................................... 20 0 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTTT................................................................................................. 24 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CATTAAAGGAAGCTAGTT................................................................................................... 18 0 1 5.00 5 0 0 5 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGCT................................................................................................... 22 1 1 5.00 5 1 0 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTTA..................................................................................................... 20 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTC................................................................................................... 22 1 1 5.00 5 2 0 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................TCGGCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 5.00 5 2 0 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 5.00 5 1 0 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTATTA................................................................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTTA................................................................................................. 24 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTGGTT................................................................................................... 22 1 1 5.00 5 4 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAACCTAGTT................................................................................................... 22 1 1 5.00 5 1 0 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTGAAGGAAGCTAGTT................................................................................................... 22 1 1 5.00 5 3 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGTATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTAT................................................................................................. 24 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGAATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAATCTAG..................................................................................................... 20 1 1 4.00 4 1 0 0 0 3 0 0 0 0 0 0 0 0 0
.................................................................TTGACATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAGAGGAAGCTAGTT................................................................................................... 22 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTTTTT................................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGGCATTAAAGGAAGCTAG..................................................................................................... 19 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGAAA.................................................................................................. 23 3 2 3.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATGGCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGAT................................................................................................... 22 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTGGCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAATCTAGTT................................................................................................... 22 1 1 3.00 3 2 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAGGCTAGTT................................................................................................... 22 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATTAAAGGAAGCTAGTTAA................................................................................................. 19 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGTAAGCTAGTT................................................................................................... 22 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGCATTAAAGGAAGCTAG..................................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCAA...................................................................................................... 19 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTATAA................................................................................................... 22 3 2 2.50 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTGGCATTAAAGGAAGCTAGTA................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTAAAAA.............................................................................................. 27 3 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTC.................................................................................................. 23 1 1 2.00 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................TTGGCGTTAAAGGAAGCTAGTTA.................................................................................................. 23 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCAATAAAGGAAGCTAGTT................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTGGCATTAAAGGAAGCTAG..................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGCATTAAAGGAAGCTAGTTTT................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTGG..................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAATCTAGT.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAATGAAGCTAGTT................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAACTAG..................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGGCATTAAAGGAAGCTA...................................................................................................... 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGCATTAAAGGAAGCTA...................................................................................................... 19 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTG.................................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGCAGCTAGTTT.................................................................................................. 23 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGCATTAAAGGAAGCTAG..................................................................................................... 20 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGTAGCTAGTT................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................GCATTAAAGGAAGCTAGT.................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAAA.................................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGTTAGTT................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTTGCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TCGGCATTAAAGGAAGCTA...................................................................................................... 19 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGGT................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTGGCATTAAAGGAAGCTAGTTA.................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATTAAAGGAAGCTAGTTA.................................................................................................. 18 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................GCATTAAAGGAAGCTAG..................................................................................................... 17 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTGGCATTAAAGGAAGCTAG..................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGCCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCTTTAAAGGAAGCTAGTT................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAACTAGTT................................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTG...................................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGTTTCCTCTAACGTTTC................................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAATT................................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGAATTAAAGGAAGCTAGTTT.................................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTGGCATTAAAGGAAGCTAGTT................................................................................................... 23 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTAAAA................................................................................................ 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAATGAAGCTAGTTA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATTAAAGGAAGCTAGTTT.................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTATAT................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTGGTA................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTTAA................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTAAAA............................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAGGCTA...................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTGGT................................................................................................ 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGCATTAAAGGAAGCTA...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTGT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTAAAGGAAGCTAGTTT.................................................................................................. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................GTGGCATTAAAGGAAGCTAGT.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AAACTTTGGCATTAAAGGAAGCTAGTT................................................................................................... 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCTTTAAAGGAAGCTAGA.................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATCAAAGGAAGCTAG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAATGGAAGCTAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTTGCATTAAAGGAAGCTGGTT................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGATAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTGAAGGAAGCTAGTTTAAA............................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAAGAAGCTAGTT................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTAGA................................................................................................ 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTAAAAA............................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTGGCATTAAAGGAAGCTAG..................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AGTTTTGGCATTAAAGGAAGCT....................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GCATTGGCATTAAAGGAAGCTAGTT................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGCAGGCTAG..................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGAG................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................AATTGGCATTAAAGGAAGCTAGTTAAA................................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATGAAAGGAAGCTAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTCT.................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTTGTT................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTAAAGGAAGCTAGT.................................................................................................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAGGGAAGC........................................................................................................ 17 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATTAAAGGAAGCTAGTTAAAA............................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGATT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGCA................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAGGGAAGCTAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGCAAGCTAG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGGCATTAAAGGAAGCTAT..................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTCAAA............................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTGGCATTAAAGGAAGCTAT..................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAATCTAGTTT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTAGCATTAAAGGAAGCTGG..................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTTTT................................................................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTGATT................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTGGCATTAAAGGAAGCTAGTAA.................................................................................................. 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTTC................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................AAACCAATGTGATCTCTTGCT......................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................ATTAAAGGAGGCTAGTT................................................................................................... 17 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGCATTAAAGGAAGCT....................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTATA.................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAACTAGTTA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTTAT.................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CGTTGGCATTAAAGGAAGCTAG..................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GCCTTGGCATTAAAGGAAGCTAGTTT.................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGACATTAAAGGAAGCTAGTTT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGGAGCTAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TCTTGGCATTAAAGGAAGCTAGTT................................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGTTCTCTCTAACGTTTCA.................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGG.................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGAAAA................................................................................................. 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGCATTAAGGGAAGCTAGTTT.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................ACCAATGTGATCTCTTGCT......................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGTCATTAAAGGAAGCTAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGTTTCCTCTAACGTTTCAAAC............................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGGCATTAAAGGAAGCTAT..................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGTCATTAAAGGAAGCTA...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCCAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TTGCATTAAAGGAAGCTAGTT................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGACGCTAGTTT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCCA...................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................AAAAACCAATGTGATCTCTTGCT......................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAGAGGAAGCTAGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGGCATTAAAGGAAGCTAGTTAAAAA.............................................................................................. 26 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................TTGGCATTAAAGGAAGTTT...................................................................................................... 19 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................GTGGCATTAAAGGAAGCTAG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGGTA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ATTGGCATTAAAGGAAGCTAGTT................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAACGAAGCTAGTT................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................CCAATGTGATCTCTTGCT......................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTTAAA............................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAGTTCCC................................................................................................ 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................TAAAGGAAGCTAGTT................................................................................................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................CTTGGAATTAAAGGAAGCTAGTT................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTATTTT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AACCAATGTGATCTCTTGCT......................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................TCGGCATTAAAGGAAGCTAGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................AGGATTGGCATTAAAGGAAGCTAGTT................................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTTAAGGAAGCTAGTTT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGCATTAAAGGAAGCTAGT.................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................CTGGCTTTAAAGGAAGCTAGTT................................................................................................... 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGGAGCTTTTT................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGTCATTAAAGGAAGCTAGTAA.................................................................................................. 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTCAAGGAAGCTAA..................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGTAAGCTAA..................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCTAAAA................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TATCGATGAATTATTACCA......................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................TTGTCATTAAAGGAAGCTAA..................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AAAGGAAGCTAGTTAA................................................................................................. 16 1 8 0.25 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCGT...................................................................................................... 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAGCAAAA.................................................................................................... 21 3 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATTAAAGGAAGCTAGTTAACC............................................................................................... 21 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................ACATTAAAGGAAGCTAGTAA.................................................................................................. 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................ATCATTGTGTAAAAAA........................................................................................................................................... 16 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTGGCATTAAAGGAAA......................................................................................................... 16 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AAAGGAAGCTAGTTA.................................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGGCATTAAAGGAA.......................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATTTATAATTATCATATTAAGGCGCGCGACGTAGTAACACAATTTTTGGTTACACTAGAGAACGAAACCGTAATTTCCTTCGATCAAATTAATGCTTTTGATCAAAGGAGATTGCAAAGTTTGTTATGTAGTACACAGCAGCGTAGCTACTTAATAATCGTTATAAGTAATTAAAAAGTAAAGTGA

***************************************************(((((((...(((.((((((.(((.(((((((((((((........))))))))))))).))).))..)))))))...)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024

male body		 SRR553487

NRT_0-2 hours eggs

 SRR902009

testis

 GSM343915

embryo

 SRR553486

Makindu_3 day-old ovaries

 SRR553485

Chicharo_3 day-old ovaries
.....................................................................................................TCAAAGGAGATTGCAAAGTT................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..................................TAACACAAGTTTCGGTTACAT................................................................................................................................... 21 3 4 0.25 1 0 1 0 0 0 0
...............ATTAAGGAGCGCGGCGCAGT....................................................................................................................................................... 20 3 5 0.20 1 0 0 1 0 0 0
.......................................................TAGAGAAGGAAACTGTAA................................................................................................................. 18 2 11 0.09 1 0 0 0 1 0 0
......................................................................................................................................AGAGCAGCGAAGCCACTTA................................. 19 3 16 0.06 1 0 0 0 0 1 0
.............................................................................................GCTTTCGATCACAGGA............................................................................. 16 2 20 0.05 1 0 0 0 0 0 1
........................................AGTTTTTGGTTACAC................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 x:3955049-3955234 - dsi-mir-303 Known_mirbase TAAATATTAATAGTATAATTCCGCGCGCTGCATCAT---TGTGTTAAAAA-CCAATGTGATCT--CTT-GCTTTGGCAT-TAAAGGAAGCTAGTTTAATTACGAAAACTAGTTTCCTCTAACGTTTCAAACAATACATCATGTGTCGTCGCATCGATGAATTATTAGCAATATTCATTAATTTTTCATTTCACT
droSec2 scaffold_4:2464280-2464453 + dse_230 candidate-rescued TAATTATTAATAGTATAATTCCGCGCGCTGTATCCT---TGTGTTAAAAA-CCAATGTGATCT--CTT-GCTTTGGCTT-TAAAGGAATCTAGTTTGATTACGAAAACTAGTTTCCTCTAAGGTTTTAAACATTACATCATGTGTCGTCGCATCGATGAATTATTAGTAATATTCATTAATT------------
dm3 chrX:4260153-4260343 - dme-mir-303 Known_mirbase TAAATATTAATAGCATAATTTCGCGCGCTGTATTCTTCTAGTGTTAAAAAACCAAATTGATAT--CTTGGTTTAGGTTT-CACAGGAAACTGGTTTAATAACGAAAACTAGTTTCCTCTAAAATCCTAATCAAGACATCATGTGTCGTCGCATCGAGAAGTTATTACCAATATTCATTCATTTTTCATTTTTTT
droEre2 scaffold_4690:1631093-1631120 - TAAATATGTGTAGCGTAAATTCGCGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:4177690-4177865 + dya_99 confident TAAATATAAATATCATAATTTCAAGCGCAGTGGCCGTCTAGCATCAGGAA-CTCAAATAATCTGCCTT-GCTTAGAATTTTAAGAGCAAAAAGTTTGTTTACAAAAACTATTTACCCCTAAAATTCTAATCTAGTCAGCATTAT--TTCGCATCGTGGAATTACTTCCAATATAAATAAA--------------
droEug1 scf7180000409076:260559-260563 - AAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAAATATTAATAGTATAATTCCGCGCGCTGCATCAT---TGTGTTAAAAA-CCAATGTGATCT--CTT-GCTTTGGCAT-TAAAGGAAGCTAGTTTAATTACGAAAACTAGTTTCCTCTAACGTTTCAAACAATACATCATGTGTCGTCGCATCGATGAATTATTAGCAATATTCATTAATTTTTCATTTCACTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................TTGGCAT-TAAAGGAAGCTAGTT...................................................................................................2218279.008279050288315628710721136265000
........................................................................TTGGCAT-TAAAGGAAGCTAG.....................................................................................................2012526.00252603003647000026012125000
........................................................................TTGGCAT-TAAAGGAAGCTAGT....................................................................................................211614.0061412002212200015910226000
........................................................................TTGGCAT-TAAAGGAAGCTA......................................................................................................191538.005380000250400008100203000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTT..................................................................................................231531.005310000197300003700294000
........................................................................TTGGCAT-TAAAGGAAGCTAGTA...................................................................................................221256.002560000000000000256000
........................................................................TTGGCAT-TAAAGGAAGCTAT.....................................................................................................201156.001560000000000000156000
........................................................................TTGGCAT-TAAAGGAAGC........................................................................................................171141.001410000000000141000000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTA..................................................................................................231117.001170000000000231093000
........................................................................TTGGCAT-TAAAGGAAGCT.......................................................................................................18171.00710000560000013002000
.............................................................................AT-TAAAGGAAGCTAGTT...................................................................................................17164.0064000000000064000000
........................................................................TTGGCAT-TAAAGGAAGCTAGA....................................................................................................21138.0038000000000000038000
........................................................................TTGGCAT-TAAAGGAAGCTAGAA...................................................................................................22126.0026000000000010025000
.........................................................................TGGCAT-TAAAGGAAGCTAGTT...................................................................................................21125.0025000060000050014000
...........................................................................................................CTAGTTTCCTCTAACGTTTCA..................................................................21125.0025020018000001004000
........................................................................TTGGCAT-TAAAGGAAGCTTT.....................................................................................................20325.0075000000000000075000
........................................................................TTGGCAT-TAAAGGAAGCTAGTAA..................................................................................................23123.0023000000000000023000
.........................................................................TGGCAT-TAAAGGAAGCTAGTTT..................................................................................................22116.001600005000008003000
..............................................................................T-TAAAGGAAGCTAGTT...................................................................................................16115.0015000000000015000000
...........................................................................................................CTAGTTTCCTCTAACGTTTCAA.................................................................22115.0015010011000100002000
...........................................................................GCAT-TAAAGGAAGCTAGTT...................................................................................................19114.0014000000000014000000
........................................................................TTGGCAT-TAAAGGAAGCTT......................................................................................................19113.0013000000000000013000
........................................................................TTGGCAT-TAAAGGAAGCTAA.....................................................................................................20112.0012000000000000012000
...........................................................................................................CTAGTTTCCTCTAACGTT.....................................................................18111.0011000011000000000000
........................................................................TTGGCAT-TAAAGGAAG.........................................................................................................1617.00700000000007000000
........................................................................TTGGCAT-TAAAGGAAGCTAGTG...................................................................................................2216.00600000000001005000
..........................................................................GGCAT-TAAAGGAAGCTAGTT...................................................................................................2016.00600000000003003000
........................................................................TTGGCAT-TAAAGGAA..........................................................................................................1516.00600000000006000000
...........................................................................................................CTAGTTTCCTCTAACGTTTCAAA................................................................2316.00600201000100002000
.............................................................................AT-TAAAGGAAGCTAGT....................................................................................................1616.00600000000006000000
.........................................................................TGGCAT-TAAAGGAAGCTAGT....................................................................................................2015.00500002000000003000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTTT.................................................................................................2415.00500000000000005000
............................................................................CAT-TAAAGGAAGCTAGTT...................................................................................................1815.00500000000005000000
........................................................................TTGGCAT-TAAAGGAAGCTTA.....................................................................................................2015.00500000000000005000
........................................................................TTGGCAT-TAAAGGAAGCTAGTC...................................................................................................2215.00500000000003002000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTTA.................................................................................................2415.00500001000000004000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTAT.................................................................................................2414.00400000000000004000
.........................................................................TGGCAT-TAAAGGAAGCTAG.....................................................................................................1913.00300002000000001000
........................................................................TTGGCAT-TAAAGGAAGCTAGAAA..................................................................................................2323.00600000000000006000
........................................................................TTGGCAT-TAAAGGAAGCTATAA...................................................................................................2222.50500000000000005000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTC..................................................................................................2312.00200000000001100000
..........................................................................GGCAT-TAAAGGAAGCTAGTTTT.................................................................................................2212.00200000000000002000
.........................................................................TGGCAT-TAAAGGAAGCTA......................................................................................................1812.00200001000000001000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTG..................................................................................................2312.00200000000000002000
...........................................................................GCAT-TAAAGGAAGCTAGT....................................................................................................1812.00200000000002000000
........................................................................TTGGCAT-TAAAGGAAGCTAAA....................................................................................................2112.00200000000000002000
.............................................................................AT-TAAAGGAAGCTAGTTA..................................................................................................1812.00200000000002000000
...........................................................................GCAT-TAAAGGAAGCTAG.....................................................................................................1712.00200000000002000000
........................................................................TTGGCAT-TAAAGGAAGCTG......................................................................................................1912.00200000000000002000
...........................................................................................................CTAGTTTCCTCTAACGTTTC...................................................................2012.00200002000000000000
.......................................................................TTTGGCAT-TAAAGGAAGCTAGTT...................................................................................................2312.00200001000001000000
.............................................................................AT-TAAAGGAAGCTAGTTT..................................................................................................1811.00100000000001000000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTTAA................................................................................................2511.00100000000010000000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTGGT................................................................................................2511.00100000000001000000
..............................................................................T-TAAAGGAAGCTAGTTT..................................................................................................1711.00100000000001000000
.......................................................................TTTGGCAT-TAAAGGAAGCTAG.....................................................................................................2111.00100000000000001000
........................................................................TTGGCAT-TAAAGGAAGCTAGAG...................................................................................................2211.00100000000000001000
..............................................................................T-TAAAGGAAGCTAGT....................................................................................................1511.00100000000001000000
........................................................................TTGGCAT-TAAAGGAAGCTAGCA...................................................................................................2211.00100000000000001000
.........................................................................TGGCAT-TAAAGGAAGCTAT.....................................................................................................1911.00100000000000001000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTTTT................................................................................................2511.00100000000000001000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTTC.................................................................................................2411.00100000000001000000
...............................................AAA-CCAATGTGATCT--CTT-GCT..........................................................................................................................2111.00101000000000000000
..........................................................................GGCAT-TAAAGGAAGCT.......................................................................................................1611.00100000000001000000
........................................................................TTGGCAT-TAAAGGAAGCTATA....................................................................................................2111.00100000000000001000
........................................................................TTGGCAT-TAAAGGAAGCTAGG....................................................................................................2111.00100000000000001000
.................................................A-CCAATGTGATCT--CTT-GCT..........................................................................................................................1911.00100000000000001000
...........................................................................................................CTAGTTTCCTCTAACGTTTCAAAC...............................................................2411.00100001000000000000
.............................................AAAAA-CCAATGTGATCT--CTT-GCT..........................................................................................................................2311.00100001000000000000
...................................................CCAATGTGATCT--CTT-GCT..........................................................................................................................1811.00101000000000000000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTTAAA...............................................................................................2611.00100000000001000000
........................................................................TTGGCAT-TAAAGGAAGCTAGTTCCC................................................................................................2511.00100000000001000000
................................................................................TAAAGGAAGCTAGTT...................................................................................................1511.00100000000001000000
................................................AA-CCAATGTGATCT--CTT-GCT..........................................................................................................................2011.00101000000000000000
..........................................................................GGCAT-TAAAGGAAGCTAGT....................................................................................................1911.00100000000001000000
........................................................................TTGGCAT-TAAAGGAAGCTAAAA...................................................................................................2220.50100000000000001000
........................................................................TTGGCAT-TAAAGGAAGCGT......................................................................................................1960.17100000000000001000
........................................................................TTGGCAT-TAAAGGAAA.........................................................................................................16160.06100000000000001000
.................................................................................AAAGGAAGCTAGTTA..................................................................................................15200.05100000000001000000
droSec2
TAATTATTAATAGTATAATTCCGCGCGCTGTATCCT---TGTGTTAAAAA-CCAATGTGATCT--CTT-GCTTTGGCTT-TAAAGGAATCTAGTTTGATTACGAAAACTAGTTTCCTCTAAGGTTTTAAACATTACATCATGTGTCGTCGCATCGATGAATTATTAGTAATATTCATTAATT------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................TTGGCTT-TAAAGGAATCTAGTT...................................................................................................2211006.001006458077084
........................................................................TTGGCTT-TAAAGGAATCTAGTTT..................................................................................................231299.002991278218
........................................................................TTGGCTT-TAAAGGAATCTAGT....................................................................................................211146.001464126412
........................................................................TTGGCTT-TAAAGGAATCTAG.....................................................................................................20176.007617005
........................................................................TTGGCTT-TAAAGGAATCTAGTTA..................................................................................................23126.002612041
........................................................................TTGGCTT-TAAAGGAATCTAGTTTT.................................................................................................24118.001801602
.........................................................................TGGCTT-TAAAGGAATCTAGTT...................................................................................................2116.0063300
........................................................................TTGGCTT-TAAAGGAATCTAGTTTA.................................................................................................2416.0060600
........................................................................TTGGCTT-TAAAGGAATCTAGTA...................................................................................................2216.0060600
........................................................................TTGGCTT-TAAAGGAATCTAGTTCT.................................................................................................2414.0040400
........................................................................TTGGCTT-TAAAGGAATCTAGTTTTT................................................................................................2514.0040400
........................................................................TTGGCTT-TAAAGGAATCTAGTTAT.................................................................................................2412.0020200
..........................................................................GGCTT-TAAAGGAATCTAGTT...................................................................................................2012.0021100
........................................................................TTGGCTT-TAAAGGAATCTAGTAA..................................................................................................2312.0020200
........................................................................TTGGCTT-TAAAGGAATCTAGTTAA.................................................................................................2412.0021010
........................................................................TTGGCTT-TAAAGGAATCTAA.....................................................................................................2012.0020200
........................................................................TTGGCTT-TAAAGGAATCTAGTC...................................................................................................2212.0020200
.......................................................................TTTGGCTT-TAAAGGAATCTAGTT...................................................................................................2311.0011000
........................................................................TTGGCTT-TAAAGGAATCTAGTTTC.................................................................................................2411.0010100
........................................................................TTGGCTT-TAAAGGAATCTAGTTTG.................................................................................................2411.0010100
............................................................................................................TAGTTTCCTCTAAGGTTTTAAA................................................................2211.0010100
........................................................................TTGGCTT-TAAAGGAATCTAGTTGT.................................................................................................2411.0011000
........................................................................TTGGCTT-TAAAGGAATCTAGTTCA.................................................................................................2411.0010100
........................................................................TTGGCTT-TAAAGGAATCTAGTTC..................................................................................................2311.0010100
...........................................................................................................CTAGTTTCCTCTAAGGTTTTA..................................................................2111.0011000
........................................................................TTGGCTT-TAAAGGAATCTAGTTTATA...............................................................................................2611.0010100
.........................................................................TGGCTT-TAAAGGAATCTAGTTA..................................................................................................2211.0010001
........................................................................TTGGCTT-TAAAGGAATCTAT.....................................................................................................2011.0010100
dm3
TAAATATTAATAGCATAATTTCGCGCGCTGTATTCTTCTAGTGTTAAAAAACCAAATTGATAT--CTTGGTTTAGGTTT-CACAGGAAACTGGTTTAATAACGAAAACTAGTTTCCTCTAAAATCCTAATCAAGACATCATGTGTCGTCGCATCGAGAAGTTATTACCAATATTCATTCATTTTTCATTTTTTTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................TAGGTTT-CACAGGAAACTGGTT...................................................................................................2213140.0031400000010001040010000004311530010000000001030024220012019300000000000000000000000015814611021016624262030232641013145114102917711027321540010000100020150000000050000001112110190000001000006606005200504010000001576034000056038000000440000001009247023113146551045120000000030110210620260000070122781040301000704227419100134500001347190027226117100614126210030000000040000022509
........................................................................TAGGTTT-CACAGGAAACTGGT....................................................................................................2111083.0010830000000000160000000012004000000000000100000101001104000000000000000000000000002000000000002200321070003000020131120008000000000000010000000000000000000000040000000000000000000102000000000006601300003601700000030000000000045183810150003000000000000000000100100000201102300111010015003815000010200107380002411312300011037100115000000100000001100
.......................................................................TTAGGTTT-CACAGGAAACTGGT....................................................................................................221243.002430000000000010000000030040000000000000000000000000021000000000000000000000000000000000000100002000000200000000020000000000000000000000000000000000000011000000000000000000000300000000000009020000707000000010000000002210750002000000000000000000000000000000010020400100000000000503000033000010100001000010000021000008000000020000000100
...........................................................................................................CTAGTTTCCTCTAAAATCCTAA.................................................................221241.0024100000001000700000000000120000000000000000000000000000000000000000000000000000110000000000107003901170004031020110251201300000000000000002000000000000000000000000000000000000010007001102000000200000000000000000000000000006011211793213000000000000000000000000000000000000000000000000010000000000000000011000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTT..................................................................................................231130.0013000000000001000000000000500000000000000000020000000000000000000000000000000002000000000111100030050000030010200610050000000000000000000000000000000000000000000000000000000001000000000000018050000808000000000000010000227200000002000000000000000000000000000200000000000000001000010000700000100001100100000000000000000000010000000000
......................................................................TTTAGGTTT-CACAGGAAACTGGT....................................................................................................231130.00130000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000015440002100000000000000000000000000000000010000200000000110300000032000000000000000010000031100008000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTGGTT...................................................................................................231118.0011800000000000000000000400200000000000000100000010100001000000000000000000000000000000000000000010000000000000000100010000000000000000000000000000000100000000000000000000000001000000000000150100002010000000000000000005350001601121000000000000000010000000000000050020000000100020200001700000000000100000000021400003000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTA..................................................................................................23177.00770000000000030000000010040000000000000000000000000000000000000000000000000000000000000000000004003000100001000030000000000000000000000000000000000000000000000000000000000000200000000000005020000401000000010000000000024001020006000000000000000001000000000000000000000000000001000000000003000000001000000003000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCCTA..................................................................21174.007400000000000000000000200700010000000000000000000000000000001000000000000000001000000000000020010000000213212101001100100000000000000000000000000000000001000000000000000000111013000100000000100000000000000000000000000003000010341000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000100
...........................................................................................................CTAGTTTCCTCTAAAATCCTAAT................................................................23174.00740000000000000000000000090000000000000000000000000000100000000000000000000000000000001000001004001000000001030051000000000000000000000000001000000000000002000000000000000000120000000000002000000000000000000000000010020260025109000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000
......................................................................TTTAGGTTT-CACAGGAAACTGGTT...................................................................................................24155.00550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000010000000000000000000000000000000000001010000000000000000000000000370000000000000000000000000000000000000001070000000000000100000002400000000000000000000000700000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTGG.....................................................................................................21145.00450000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000003001000000000000010001000000000000000000000000000000000000000000000000000000000100000000000002020000200000000010000000000119000020000000100000000000000000000000000000000000000000001000000200000010000000000000000200001000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGG.....................................................................................................20140.0040000000000000000001001005000000000000000000000000000100000000000000000000000000000000000000000100100000100000000000000000000000000000000000000000000000000000000000000000000010000000000000505000000100000000000000000029000020000000000000000000001000000000000001000000000000000000000200000000000000000000000000000000000000000000000
......................................................................TTTAGGTTT-CACAGGAAACTGG.....................................................................................................22127.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000201000000000000000000110000130001000000000000000000000000000000002000000000000000000000300000000000000000000000100001000000000000000000
........................................................................TAGGTTT-CACAGGAAACT.......................................................................................................18126.00260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000003000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTG..................................................................................................23124.0024000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000010200000000000000000006100000000000000000000000000000000000000001000000000000002000000100000110000002001000002000000000000000000000000
............................................................................TTT-CACAGGAAACTGGTT...................................................................................................18122.00220000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000000000000017000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................TT-CACAGGAAACTGGTT...................................................................................................17121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTA...................................................................................................22120.0020000000000002100000000001000000000000000000000000000000000000000000000000000000000000000000001200200000200000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCCTAAC................................................................23116.0016000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000000000000001001000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTATC................................................................................................25116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000097000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTGGTTT..................................................................................................24116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000001000000000000000000000000000000000000200000030000000000000000000006000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000
............................................................................................................TAGTTTCCTCTAAAATCCTAAT................................................................22114.0014000000000000000000000002000000000000000000000000000000000000000000000000000010000000000000000200100000000040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCCT...................................................................20112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000001100000000000000000000000000000000000000000000100000000000000000000000000000000000001001010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000
...........................................................................................................CTAGTTTCCTCTAAAATCCTAAA................................................................23112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000001000330000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTC...................................................................................................22111.0011000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000002000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................TTT-CACAGGAAACTGGT....................................................................................................17111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTAA..................................................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000001000000000010000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTG......................................................................................................19110.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TAGTTTCCTCTAAAATCCTAATC...............................................................23110.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000101000000000000000001000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................TTTAGGTTT-CACAGGAAACT.......................................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000300000000000000000000000100001000000000000000000
.........................................................................AGGTTT-CACAGGAAACTGGTTT..................................................................................................2218.008000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000003000010000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATC.....................................................................1818.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTG......................................................................................................2017.007000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000003000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTG...................................................................................................2217.007000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCC....................................................................1916.006000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TAGTTTCCTCTAAAATCCTAATT...............................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTTAGGTTT-CACAGGAAACTG......................................................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000001000000000000000000000000000000000000200000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTC..................................................................................................2316.006000002000000000000000002000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTGT.................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000002000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGC....................................................................................................2115.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000
..........................................................................GGTTT-CACAGGAAACTGGTT...................................................................................................2015.005000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCCTAATC...............................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CAAATTGATAT--CTTGGTT..........................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000100000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTAT.................................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TAGTTTCCTCTAAAATCCTAA.................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ACTAGTTTCCTCTAAAATCCT...................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACT.......................................................................................................1914.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGG....................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100001000000100000000000000000000000000000000000000000000000000000000000000
.........................................................................AGGTTT-CACAGGAAACTGGTT...................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTGGTTA..................................................................................................2414.004000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTGGC....................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGA....................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................TAGTTTCCTCTAAAATCCTAATA...............................................................2313.003000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTTA.................................................................................................2413.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTCCTCTAAAATCCTAAT................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCCTAAATC..............................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTTATC...............................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TAGTTTCCTCTAAAATCCT...................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTGGTA...................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTTT.................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTTTC................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCCTAAAA...............................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TAGGTTT-CACAGGAAACTGGTTTAA................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CTAGTTTCCTCTAAAATCCTG..................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CCAAATTGATAT--CTTGGTT..........................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTAGGTTT-CACAGGAAACTGGTG...................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTCGCGCGCTGTATTCTTCTAG.........................................................................................................................................................2211.001000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTTAGGTTT-CACAGGAAACTGGTTT..................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droEre2
TAAATATGTGTAGCGTAAATTCGCGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads
droYak3
TAAATATAAATATCATAATTTCAAGCGCAGTGGCCGTCTAGCATCAGGAA-CTCAAATAATCTGCCTT-GCTTAGAATTTTAAGAGCAAAAAGTTTGTTTACAAAAACTATTTACCCCTAAAATTCTAATCTAGTCAGCATTAT--TTCGCATCGTGGAATTACTTCCAATATAAATAAA--------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................TATTTACCCCTAAAATTCTAATC...............................................................23152.00522222710000000
............................................................................................................TATTTACCCCTAAAATTCTAAT................................................................22113.001304900000000
.......................................................................TTAGAATTTTAAGAGCAAAAAGT....................................................................................................2318.00810410020000
.......................................................................TTAGAATTTTAAGAGCAAAAAG.....................................................................................................2216.00600100050000
.............................................................................................................ATTTACCCCTAAAATTCTAATC...............................................................2216.00603300000000
.......................................................................TTAGAATTTTAAGAGCAAAAA......................................................................................................2112.00201000010000
.............................................................................................................ATTTACCCCTAAAATTCTAA.................................................................2011.00101000000000
.......................................................................TTAGAATTTTAAGAGCAAAAAGA....................................................................................................2311.00100000010000
............................................................................................................TATTTACCCCTAAAATTCTAATCA..............................................................2411.00100010000000
.........................................................................AGAATTTTAAGAGCAAAAAGTT...................................................................................................2211.00100000010000
.......................................................................TTAGAATTTTAAGAGCAAAAAGTT...................................................................................................2411.00100000010000
.......................................................................TTAGAATTTTAAGAGCAAAA.......................................................................................................2011.00110000000000
............................................................................................................TATTTACCCCTAAAATTCTAATCT..............................................................2411.00101000000000
.............................................................................................................ATTTACCCCTAAAATTCTAAT................................................................2111.00101000000000
............................................................................................................TATTTACCCCTAAAATTCTAA.................................................................2111.00101000000000
...............................................................................................................TTACCCCTAAAATTCTAATC...............................................................2011.00101000000000
.............................................................................................................ATTTACCCCTAAAATTCTAATCC..............................................................2311.00100100000000
........................................................................TAGAATTTTAAGAGCAAAAAGT....................................................................................................2211.00101000000000
droEug1
AAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 10/20/2015 at 06:59 PM