ID:

dsi-mir-286

 Coordinate:

2r:16196199-16196298 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.1 -29.4 -29.4

Flybase annnotation

utr3 [utr3_minus_3618]

No Repeatable elements found

Sense Strand Reads

CAAATCAACAATCCAAAAAGCAAGAGTAAGTGATATTGGGCACTCCAGTTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAAGAAAGGTTTCGATCAAGCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCAGTGAAGTTGCAAGTGAAACTTCAAATATTCTGTGG

***********************************************((((((((((((....((((.(((((((.(((((.((((.......(((....)))........)))).))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M025

embryo

 GSM343915

embryo

 SRR553487

NRT_0-2 hours eggs

 SRR553488

RT_0-2 hours eggs

 SRR553485

Chicharo_3 day-old ovaries

 M023

head

 M024

male body		 SRR553486

Makindu_3 day-old ovaries

 M053

female body

 O002

Head

 SRR902009

testis

 SRR618934

dsim w501 ovaries

 O001

Testis

 SRR902008

ovaries

 SRR1275487

Male larvae
...................................................................................................................TGACTAGACCGAACACTCGTGCT.............................................................. 23 0 1 1382795.00 1382795 960973 169942 132351 110353 4085 2519 1087 1212 212 30 14 11 2 3 1
...................................................................................................................TGACTAGACCGAACACTCGTGCC.............................................................. 23 1 1 113758.00 113758 112821 268 137 85 3 335 108 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGC............................................................... 22 0 1 69704.00 69704 46695 7816 8606 5888 222 283 86 72 17 9 4 2 1 3 0
...................................................................................................................TGACTAGACCGAACACTCGTGCG.............................................................. 23 1 1 54047.00 54047 53739 160 6 0 2 86 52 1 1 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCG.................................................................. 19 0 1 4915.00 4915 4845 5 8 19 0 19 9 0 1 5 0 1 3 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCTT............................................................. 24 1 1 4724.00 4724 2252 539 1138 742 15 12 10 10 5 0 1 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTG................................................................ 21 0 1 4456.00 4456 2510 439 844 582 24 28 13 10 1 3 0 1 1 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGG............................................................... 22 1 1 3354.00 3354 3338 2 0 0 0 9 5 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCTA............................................................. 24 0 1 2731.00 2731 978 90 862 761 21 4 1 13 0 0 0 1 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGGGCT.............................................................. 23 1 1 2515.00 2515 2136 306 28 25 4 7 4 2 2 0 1 0 0 0 0
...................................................................................................................TGACTAGACCGCACACTCGTGCT.............................................................. 23 1 1 2159.00 2159 81 2063 8 6 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGAC.............................................................. 23 2 1 1653.00 1653 1647 1 0 0 0 4 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCTTGCT.............................................................. 23 1 1 1617.00 1617 1325 47 145 93 1 4 1 0 1 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGCGCT.............................................................. 23 1 1 1582.00 1582 836 649 48 44 2 3 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGGCCGAACACTCGTGCT.............................................................. 23 1 1 1569.00 1569 1323 195 26 20 1 3 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCTAT............................................................ 25 0 1 1566.00 1566 70 77 658 752 6 1 1 0 1 0 0 0 0 0 0
..................................................................................................................CTGACTAGACCGAACACTCGTGCT.............................................................. 24 1 1 1558.00 1558 1422 106 10 8 2 7 2 0 1 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAGCACTCGTGCT.............................................................. 23 1 1 1282.00 1282 938 294 23 23 0 2 2 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACCCGTGCT.............................................................. 23 1 1 1241.00 1241 871 288 40 39 0 2 1 0 0 0 0 0 0 0 0
...................................................................................................................TGGCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 1174.00 1174 870 238 27 29 2 5 1 0 2 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGT............................................................... 22 1 1 1150.00 1150 787 331 11 9 0 8 2 0 0 0 2 0 0 0 0
..............................................................GGCGAATGTCGGTATGGTCTCT.................................................................................................................... 22 0 1 976.00 976 476 10 248 222 14 1 1 3 1 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTTGTGCT.............................................................. 23 1 1 924.00 924 538 203 106 72 1 1 3 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCCTGCT.............................................................. 23 1 1 890.00 890 649 69 110 61 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 883.00 883 510 227 62 62 5 7 6 2 1 0 0 1 0 0 0
...................................................................................................................TGACTAGACCAAACACTCGTGCT.............................................................. 23 1 1 811.00 811 544 133 71 60 1 1 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACTCGTGCT.............................................................. 23 1 1 793.00 793 183 575 14 19 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAATCGTGCT.............................................................. 23 1 1 732.00 732 145 532 33 19 1 0 2 0 0 0 0 0 0 0 0
....................................................................................................................GACTAGACCGAACACTCGTGCT.............................................................. 22 0 1 722.00 722 557 79 34 34 1 1 1 0 15 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCATGCT.............................................................. 23 1 1 708.00 708 453 136 60 55 2 1 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACTGAACACTCGTGCT.............................................................. 23 1 1 703.00 703 444 144 63 50 0 1 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTGGACCGAACACTCGTGCT.............................................................. 23 1 1 661.00 661 430 165 29 31 3 1 2 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACCCTCGTGCT.............................................................. 23 1 1 649.00 649 52 471 67 58 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACACTCGTGCT.............................................................. 23 1 1 636.00 636 83 540 4 7 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTTCT.............................................................. 23 1 1 631.00 631 273 130 149 76 0 1 0 1 1 0 0 0 0 0 0
...................................................................................................................TGACTATACCGAACACTCGTGCT.............................................................. 23 1 1 607.00 607 424 70 57 50 1 4 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGT................................................................. 20 0 1 603.00 603 310 75 105 78 5 8 1 1 0 15 1 1 3 0 0
...................................................................................................................TGACTAGACCGAACGCTCGTGCT.............................................................. 23 1 1 599.00 599 338 215 24 19 1 2 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTAGTGCT.............................................................. 23 1 1 544.00 544 181 293 30 39 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TAACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 525.00 525 319 121 42 41 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TGATTAGACCGAACACTCGTGCT.............................................................. 23 1 1 521.00 521 192 83 140 101 4 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGTT.............................................................. 23 1 1 488.00 488 180 247 33 27 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................TGACTAGATCGAACACTCGTGCT.............................................................. 23 1 1 488.00 488 253 132 59 40 1 1 0 2 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACGCGTGCT.............................................................. 23 1 1 479.00 479 53 418 4 4 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCA.............................................................. 23 1 1 478.00 478 322 23 63 59 6 1 1 3 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACCCGTGG............................................................... 22 2 1 474.00 474 473 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACATTCGTGCT.............................................................. 23 1 1 443.00 443 138 71 120 105 5 0 0 4 0 0 0 0 0 0 0
...................................................................................................................TTACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 436.00 436 215 41 80 56 30 1 0 13 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTACACTCGTGCT.............................................................. 23 1 1 436.00 436 34 389 4 7 0 0 0 0 2 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTCCT.............................................................. 23 1 1 426.00 426 276 74 54 21 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACCAGACCGAACACTCGTGCT.............................................................. 23 1 1 420.00 420 191 150 48 28 1 0 1 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTACT.............................................................. 23 1 1 420.00 420 279 86 31 21 1 1 0 0 1 0 0 0 0 0 0
...................................................................................................................TCACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 414.00 414 314 44 29 22 0 4 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCCAACACTCGTGCT.............................................................. 23 1 1 403.00 403 103 250 37 12 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAAAACTCGTGCT.............................................................. 23 1 1 397.00 397 138 134 67 57 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGAGCT.............................................................. 23 1 1 393.00 393 231 144 9 7 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAATACTCGTGCT.............................................................. 23 1 1 388.00 388 195 120 35 37 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGACCACTCGTGCT.............................................................. 23 1 1 379.00 379 26 308 25 20 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACAGAACACTCGTGCT.............................................................. 23 1 1 369.00 369 138 151 37 39 3 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGATCACTCGTGCT.............................................................. 23 1 1 353.00 353 24 323 4 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTAC............................................................... 22 1 1 348.00 348 340 4 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTACACCGAACACTCGTGCT.............................................................. 23 1 1 346.00 346 265 29 35 17 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGGGCC.............................................................. 23 2 1 302.00 302 299 1 0 0 0 1 1 0 0 0 0 0 0 0 0
....................................................................................TTTTCCAAAGAAAGGTTTCGATCA............................................................................................ 24 0 1 299.00 299 290 1 3 4 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................GGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 292.00 292 112 155 5 6 6 4 3 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGAT.............................................................. 23 1 1 292.00 292 73 174 18 25 0 1 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCTAACACTCGTGCT.............................................................. 23 1 1 292.00 292 102 51 84 54 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 284.00 284 158 75 10 19 10 7 4 0 1 0 0 0 0 0 0
...................................................................................................................TGACTAAACCGAACACTCGTGCT.............................................................. 23 1 1 275.00 275 155 74 27 19 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTC................................................................... 18 0 1 266.00 266 207 0 8 23 0 0 0 0 0 25 0 0 3 0 0
...................................................................................................................TGAATAGACCGAACACTCGTGCT.............................................................. 23 1 1 225.00 225 32 184 4 4 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACACGTGCT.............................................................. 23 1 1 221.00 221 67 131 14 9 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGCCCGAACACTCGTGCT.............................................................. 23 1 1 206.00 206 50 109 24 23 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCTGACTAGACCGAACACTCGTGCT.............................................................. 25 2 1 188.00 188 182 4 0 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................TTTTCCAAAGAAAGGTTTCGATCAAG.......................................................................................... 26 0 1 171.00 171 160 1 3 7 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ACTAGACCGAACACTCGTGCT.............................................................. 21 0 1 170.00 170 101 30 25 14 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTGGTGCT.............................................................. 23 1 1 167.00 167 115 23 13 12 1 2 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGGCCGAACACTCGTGCC.............................................................. 23 2 1 166.00 166 164 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................CTGACTAGACCGAACACTCGTGCC.............................................................. 24 2 1 163.00 163 162 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCTTGCC.............................................................. 23 2 1 154.00 154 153 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGGGC............................................................... 22 1 1 151.00 151 127 21 2 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAGCGAACACTCGTGCT.............................................................. 23 1 1 141.00 141 85 33 9 12 0 0 0 1 1 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACCCTCGTGCT.............................................................. 23 2 1 139.00 139 0 139 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGTCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 138.00 138 68 46 8 15 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCTC............................................................. 24 1 1 137.00 137 77 24 19 15 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTCGACCGAACACTCGTGCT.............................................................. 23 1 1 130.00 130 26 97 5 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGAGTAGACCGAACACTCGTGCT.............................................................. 23 1 1 126.00 126 57 47 11 10 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACTCTCGTGCT.............................................................. 23 1 1 126.00 126 45 71 5 3 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTAGACCGAACACTCGTGCT.............................................................. 20 0 1 124.00 124 73 19 20 12 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGA............................................................... 22 1 1 121.00 121 85 13 6 5 1 8 2 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGCGCC.............................................................. 23 2 1 117.00 117 108 8 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACAATCGTGCT.............................................................. 23 2 1 106.00 106 0 105 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGCTAGACCGAACACTCGTGCC.............................................................. 23 2 1 104.00 104 103 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGGGCG.............................................................. 23 2 1 104.00 104 104 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGGT.............................................................. 23 1 1 101.00 101 28 65 4 4 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAGCACTCGTGCC.............................................................. 23 2 1 96.00 96 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAGACCGAACACTCGTGCT.............................................................. 19 0 1 96.00 96 25 35 19 16 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGTCCGAACACTCGTGCT.............................................................. 23 1 1 96.00 96 30 50 7 9 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACGGAACACTCGTGCT.............................................................. 23 1 1 89.00 89 56 11 9 10 2 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACTCGTGC............................................................... 22 1 1 88.00 88 2 85 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGCCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 85.00 85 36 44 4 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCTTGCG.............................................................. 23 2 1 85.00 85 85 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACCCGTGCC.............................................................. 23 2 1 84.00 84 83 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGGCCGAACACTCGTGC............................................................... 22 1 1 83.00 83 65 15 2 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGCGC............................................................... 22 1 1 83.00 83 47 31 2 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCTTT............................................................ 25 1 1 82.00 82 46 2 21 13 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AGACCGAACACTCGTGCT.............................................................. 18 0 1 81.00 81 37 7 19 14 0 1 0 0 0 0 0 3 0 0 0
...................................................................................................................TGACGAGACCGAACACTCGTGCT.............................................................. 23 1 1 80.00 80 30 46 4 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTTGACCGAACACTCGTGCT.............................................................. 23 1 1 80.00 80 30 32 14 4 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACGCGGGCT.............................................................. 23 2 1 78.00 78 0 78 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CTGACTAGACCGAACACTCGTGC............................................................... 23 1 1 75.00 75 71 3 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCTG............................................................. 24 1 1 74.00 74 64 2 3 5 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CTGACTAGACCGAACACTCGTGCG.............................................................. 24 2 1 74.00 74 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTTGTGCC.............................................................. 23 2 1 70.00 70 68 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACTGAACACTCGTGCC.............................................................. 23 2 1 70.00 70 69 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACAAGACCGAACACTCGTGCT.............................................................. 23 1 1 69.00 69 40 17 4 8 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGGCCGAACACTCGTGCG.............................................................. 23 2 1 68.00 68 68 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTGGACCGAACACTCGTGCC.............................................................. 23 2 1 67.00 67 65 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAAGACTCGTGCT.............................................................. 23 1 1 67.00 67 31 23 6 7 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GACTAGACCGAACACTCGTGCC.............................................................. 22 1 1 67.00 67 67 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACGCGTGCT.............................................................. 23 2 1 65.00 65 0 65 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCAAACACTCGTGCC.............................................................. 23 2 1 62.00 62 62 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAGCACTCGTGC............................................................... 22 1 1 61.00 61 43 18 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GGCGAATGTCGGTATGGTCTC..................................................................................................................... 21 0 1 59.00 59 29 3 15 9 2 0 0 0 0 1 0 0 0 0 0
....................................................................................................................TACTAGACCGAACACTCGTGCT.............................................................. 22 1 1 59.00 59 12 1 32 14 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 58.00 58 53 2 0 0 0 3 0 0 0 0 0 0 0 0 0
..............................................................GGCGAATGTCGGTATGGTCTCC.................................................................................................................... 22 1 1 58.00 58 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGCGCG.............................................................. 23 2 1 57.00 57 54 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTATACCGAACACTCGTGCC.............................................................. 23 2 1 55.00 55 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCCTGCC.............................................................. 23 2 1 55.00 55 53 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGCTAGACCGAACACTCGTGC............................................................... 22 1 1 53.00 53 38 10 4 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAGTCGTGCT.............................................................. 23 1 1 53.00 53 19 17 9 7 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGGCTAGACCGAACACTCGTGCG.............................................................. 23 2 1 52.00 52 45 7 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAGCACTCGTGCG.............................................................. 23 2 1 49.00 49 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AGTGACTAGACCGAACACTCGTG................................................................ 23 0 1 49.00 49 13 0 21 15 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTCT............................................................... 22 2 1 45.00 45 6 0 24 14 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................GTGACTAGACCGAACACTCGTGCT.............................................................. 24 0 1 45.00 45 41 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTTGTGC............................................................... 22 1 1 45.00 45 25 6 5 9 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTTGCT................................................................ 21 3 2 44.50 89 77 0 11 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACCCGTGC............................................................... 22 1 1 44.00 44 25 17 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCTTGCTT............................................................. 24 2 1 43.00 43 38 0 5 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACTCGCGCT.............................................................. 23 2 1 43.00 43 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCTTGC............................................................... 22 1 1 43.00 43 27 3 7 4 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCATGCC.............................................................. 23 2 1 42.00 42 41 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACTCGTGC............................................................... 22 1 1 42.00 42 13 26 3 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTAGGGCT.............................................................. 23 2 1 41.00 41 2 39 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTGGACCGAACACTCGTGC............................................................... 22 1 1 40.00 40 30 8 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCCCACTCGTGCT.............................................................. 23 2 1 39.00 39 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGGG................................................................ 21 1 1 38.00 38 37 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCTCACTCGTGCT.............................................................. 23 2 1 38.00 38 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACTGAACACTCGTGC............................................................... 22 1 1 38.00 38 19 7 5 7 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TTTTCCAAAGAAAGGTTTCGATCAAGCG........................................................................................ 28 0 1 37.00 37 30 0 5 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACGCTCGTGC............................................................... 22 1 1 37.00 37 24 7 3 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 37.00 37 36 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACACGTGCT.............................................................. 23 2 1 37.00 37 1 36 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCCTGC............................................................... 22 1 1 37.00 37 16 9 7 5 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACGCTCGTGCC.............................................................. 23 2 1 36.00 36 35 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGTG.............................................................. 23 2 1 36.00 36 20 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCCTGCG.............................................................. 23 2 1 36.00 36 35 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TTTTCCAAAGAAAGGTTTCGAT.............................................................................................. 22 0 1 36.00 36 33 1 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGG................................................................. 20 1 1 36.00 36 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGATCGAACACTCGTGCC.............................................................. 23 2 1 35.00 35 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAATACTCGTGCC.............................................................. 23 2 1 35.00 35 33 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAAAACTCGTGC............................................................... 22 1 1 35.00 35 10 8 12 5 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGCCT............................................................. 24 2 1 35.00 35 30 3 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCCATCACTCGTGCT.............................................................. 23 2 1 34.00 34 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TAACTAGACCGAACACTCGTGC............................................................... 22 1 1 34.00 34 21 9 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACT.................................................................... 17 0 1 34.00 34 0 0 8 25 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAATCGTGC............................................................... 22 1 1 34.00 34 9 21 3 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACCCGTGCG.............................................................. 23 2 1 34.00 34 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CGACTAGACCGAACACTCGTGC............................................................... 22 1 1 34.00 34 21 8 3 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACGCGGGCT.............................................................. 23 3 1 34.00 34 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGATCACTCGTGCT.............................................................. 23 2 1 34.00 34 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGAGCC.............................................................. 23 2 1 33.00 33 32 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACAATCGTGCT.............................................................. 23 2 1 33.00 33 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GACTAGACCGAACACTCGTGC............................................................... 21 0 1 33.00 33 24 4 4 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTACC.............................................................. 23 2 1 33.00 33 32 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TCACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 33.00 33 32 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GACTAGACCGAACACTCGTGCG.............................................................. 22 1 1 32.00 32 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CGACTAGACCGAACACTCGTGCG.............................................................. 23 2 1 32.00 32 28 4 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTACTAGACCGAACACTCGTGC............................................................... 22 1 1 32.00 32 8 3 10 8 1 0 0 2 0 0 0 0 0 0 0
...................................................................................................................TGACTACACCGAACACTCGTGCC.............................................................. 23 2 1 32.00 32 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACTCGGGCT.............................................................. 23 2 1 31.00 31 1 30 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 31.00 31 26 2 0 0 0 1 2 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACGCGTGCT.............................................................. 23 2 1 31.00 31 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACCCTCGTGC............................................................... 22 1 1 31.00 31 2 20 5 4 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTTCACTCGTGCT.............................................................. 23 2 1 31.00 31 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCATGCG.............................................................. 23 2 1 31.00 31 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACCAACACTCGTGCT.............................................................. 23 2 1 31.00 31 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGATTAGACCGAACACTCGTGC............................................................... 22 1 1 31.00 31 8 5 11 7 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTACACTCGGGCT.............................................................. 23 2 1 30.00 30 0 29 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCATGC............................................................... 22 1 1 30.00 30 19 6 1 3 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TAACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 29.00 29 28 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................ATGGCGAATGTCGGTATGGTC....................................................................................................................... 21 0 1 29.00 29 15 13 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTACACGCGTGCT.............................................................. 23 2 1 29.00 29 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCTAACACTCGTGC............................................................... 22 1 1 29.00 29 6 2 15 6 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGACCCCTCGTGCT.............................................................. 23 2 1 28.00 28 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACACTCGTGC............................................................... 22 1 1 28.00 28 1 27 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAATACTCGTGC............................................................... 22 1 1 28.00 28 9 10 5 4 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTTGTGCG.............................................................. 23 2 1 27.00 27 24 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGATCGAACACTCGTGC............................................................... 22 1 1 27.00 27 9 12 4 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACACTCGTGCG.............................................................. 23 2 1 27.00 27 8 19 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGATCAATCGTGCT.............................................................. 23 2 1 27.00 27 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACATTCGTGC............................................................... 22 1 1 27.00 27 8 5 6 8 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTGTC.............................................................. 23 2 1 27.00 27 24 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACCGAACACTCGTGCT.............................................................. 16 0 1 27.00 27 0 0 19 8 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACTGAACACTCGTGCG.............................................................. 23 2 1 26.00 26 24 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTAGTGC............................................................... 22 1 1 26.00 26 9 13 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACAATCGTGTT.............................................................. 23 3 1 26.00 26 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................ATCTGACTAGACCGAACACTCGTGCT.............................................................. 26 2 1 26.00 26 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTATACCGAACACTCGTGC............................................................... 22 1 1 25.00 25 10 5 6 4 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGAATAGACCGAACACTAGTGCT.............................................................. 23 2 1 25.00 25 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTCCC.............................................................. 23 2 1 25.00 25 24 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCCAACAATCGTGCT.............................................................. 23 2 1 25.00 25 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAC..................................................................... 16 0 1 25.00 25 0 0 10 15 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TCACTAGACCGAACACTCGTGC............................................................... 22 1 1 25.00 25 16 4 3 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGACTATACCGAACACTCGTGCG.............................................................. 23 2 1 25.00 25 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACACTCGGGCT.............................................................. 23 2 1 24.00 24 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACGCGTGC............................................................... 22 1 1 24.00 24 1 22 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAAACCGAACACTCGTGCC.............................................................. 23 2 1 24.00 24 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAATCGTGCG.............................................................. 23 2 1 24.00 24 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCAAACACTCGTGCG.............................................................. 23 2 1 23.00 23 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAATCGTGCC.............................................................. 23 2 1 23.00 23 20 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTTC............................................................... 22 1 1 23.00 23 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCTGACTAGACCGAACACTCGTGCC.............................................................. 25 3 1 23.00 23 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCAAACACTCGTGC............................................................... 22 1 1 23.00 23 11 6 1 5 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTGGACCGAACACTCGTGCG.............................................................. 23 2 1 22.00 22 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACTCGTGCC.............................................................. 23 2 1 22.00 22 19 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAATCGTGTT.............................................................. 23 2 1 22.00 22 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGCTCT.............................................................. 23 2 1 22.00 22 0 19 2 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGATCGAACACTCGTGCG.............................................................. 23 2 1 21.00 21 20 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACCAGACCGAACACTCGTGCC.............................................................. 23 2 1 21.00 21 20 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTTCC.............................................................. 23 2 1 21.00 21 19 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGATTAGACCGAACACTCGTGCC.............................................................. 23 2 1 21.00 21 20 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACCCGCGCT.............................................................. 23 2 1 21.00 21 3 17 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACAGAACACTCGTGCC.............................................................. 23 2 1 20.00 20 19 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTACACTCGTGC............................................................... 22 1 1 20.00 20 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCCAACACTCGTGC............................................................... 22 1 1 20.00 20 7 6 6 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACACTCGTGTT.............................................................. 23 2 1 20.00 20 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GATCTGACTAGACCGAACACTCGTGCT.............................................................. 27 2 1 20.00 20 19 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACAGAAAACTCGTGCT.............................................................. 23 2 1 20.00 20 1 17 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCCCACACTCGTGCT.............................................................. 23 2 1 20.00 20 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGAGC............................................................... 22 1 1 20.00 20 13 6 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAAAGAACACTCGTGCT.............................................................. 23 2 1 19.00 19 0 18 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTACTCTCGTGCT.............................................................. 23 2 1 19.00 19 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TAACTAGACCGAACACTCGTGCG.............................................................. 23 2 1 19.00 19 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAAAACTCGTGCT.............................................................. 23 2 1 19.00 19 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGAACACTCGTGCC.............................................................. 23 2 1 19.00 19 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTAGTGCC.............................................................. 23 2 1 19.00 19 17 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACGCGTGCG.............................................................. 23 2 1 18.00 18 2 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACTCGTGGT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGATCACTCGTGTT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGGCACTCGTGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTACACTCGCGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTGCACTCGTGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTAGCGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACAATCGTGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAAACGTGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTAGTGCG.............................................................. 23 2 1 18.00 18 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTACACCGAACACTCGTGCG.............................................................. 23 2 1 18.00 18 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACTAGTGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTACTAGACCGAACACTCGTGCG.............................................................. 23 2 1 18.00 18 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTTGACCGGACACTCGTGCT.............................................................. 23 2 1 18.00 18 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACAGAACACTCGTGC............................................................... 22 1 1 18.00 18 6 6 4 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACTCTCGTGCT.............................................................. 23 2 1 17.00 17 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTACACCGAACACTCGTGC............................................................... 22 1 1 17.00 17 11 2 4 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTACG.............................................................. 23 2 1 17.00 17 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGATCAATCGTGCT.............................................................. 23 3 1 17.00 17 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGCCCGCACACTCGTGCT.............................................................. 23 2 1 17.00 17 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACTCGCGCT.............................................................. 23 2 1 17.00 17 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TCACTAGACCGAACACTCGTGCG.............................................................. 23 2 1 17.00 17 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACGAGTGCT.............................................................. 23 2 1 17.00 17 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACCAGACCGAACACTCGTGC............................................................... 22 1 1 17.00 17 6 5 4 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAAACCGAACACTCGTGC............................................................... 22 1 1 17.00 17 8 2 4 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAACGGACACTCGTGCT.............................................................. 23 2 1 17.00 17 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGCTAGACCGATCACTCGTGCT.............................................................. 23 2 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................GGACTAGACCGAACACGCGTGCT.............................................................. 23 2 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACAAACGTGCT.............................................................. 23 3 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACTCGTGCC.............................................................. 23 2 1 16.00 16 7 8 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAATCGGGCT.............................................................. 23 2 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTCC............................................................... 22 1 1 16.00 16 9 3 3 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACAATCGCGCT.............................................................. 23 2 1 16.00 16 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACTCGGGCT.............................................................. 23 2 1 16.00 16 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTCGACCGCACACTCGTGCT.............................................................. 23 2 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACCCTCGCGCT.............................................................. 23 2 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGGACACTCGTGCG.............................................................. 23 2 1 16.00 16 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGTCCG.............................................................. 23 2 1 15.00 15 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGAATAGACCGAACACTAGGGCT.............................................................. 23 3 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTCGAGCG.............................................................. 23 2 1 15.00 15 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGAGCGAACACTCGTGCC.............................................................. 23 2 1 15.00 15 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTTCTCTCGTGCT.............................................................. 23 3 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GGCGAATGTCGGTATGGTCT...................................................................................................................... 20 0 1 15.00 15 9 1 2 2 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACACTGCT................................................................. 20 2 1 15.00 15 13 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACACGTGCT.............................................................. 23 2 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGCACACTCGTGCG.............................................................. 23 2 1 15.00 15 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCCAACCCTCGTGCT.............................................................. 23 2 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGATCGTACACTCGTGCT.............................................................. 23 2 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAACGCTCGTGCG.............................................................. 23 2 1 15.00 15 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGAATACGCGTGCT.............................................................. 23 2 1 15.00 15 1 14 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGACTAGACCGTACAATCGTGCT.............................................................. 23 2 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AGTGACTAGACCGAACACTCGT................................................................. 22 0 1 15.00 15 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTTTAGTTGTTAGGTTTTTCGTTCTCATTCACTATAACCCGTGAGGTCAAAATTTTAACTTACCGCTTACAGCCATACCAGAGAAAAAGGTTTCTTTCCAAAGCTAGTTCGCTTCACTGATCTGGCTTGTGAGCACGATATTAAAATTTTATAAGTTGTACGAGTCACTTCAACGTTCACTTTGAAGTTTATAAGACACC

***********************************************((((((((((((....((((.(((((((.(((((.((((.......(((....)))........)))).))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934

dsim w501 ovaries

 SRR553488

RT_0-2 hours eggs

 SRR553487

NRT_0-2 hours eggs

 M023

head

 SRR553486

Makindu_3 day-old ovaries
................................................................................GAGAAAAAGGTTTCTCTCA..................................................................................................... 19 2 1 1.00 1 1 0 0 0 0
......................................................................................................................GAGCTGGCTTGTGAG................................................................... 15 1 7 0.57 4 0 1 3 0 0
......TGGTTAGGTTTTTCAATCTCATT........................................................................................................................................................................... 23 3 2 0.50 1 0 1 0 0 0
......................................CCGTTAGGTCAAAAGTTTTAC............................................................................................................................................. 21 3 6 0.17 1 0 0 0 1 0
...................................................................................AGAAGGGTTTCTTTCCA.................................................................................................... 17 2 16 0.06 1 0 0 0 0 1
............................................................................................................................GATTGTCAGCACGATA............................................................ 16 2 19 0.05 1 1 0 0 0 0
.....................................................................................................................TGATCTGGTTTGTGGG................................................................... 16 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 2r:16196149-16196348 - dsi-mir-286 Known_mirbase CAAA-TC------AAC--AATCCAAA----------------AAGCAAGAGTAAGTGATATT-GGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAAGAAA-----------GGTT----TCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------GAA-GTT-GCAAGTGA--------------AACT------------T---------CAA----------------ATAT---TC-----------TGTGG
droSec2 scaffold_1:13063607-13063805 - dse-mir-286 Known_mirbase CAAA-TC------AAC--AATCAAAA----------------AATCAAGAGTAAGTTATATT-GGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA-ATAAA-----------GGTT----TCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------GAA-GTT-GCAAGTGA--------------AACT------------T---------CAA----------------ATAT---TC-----------TGTGG
dm3 chr2R:15548878-15549078 - dme-mir-286 Known_mirbase CAAA-TC------AATTAAATCAAAA----------------AATCAAGAGTAAGTGATATT-GGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-AGAAA-----------GGTT----TCGATT-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------AAA-GTT-GCGAGTGA--------------AAAT------------T---------AAA----------------ATAT---TA-----------TGGAG
droEre2 scaffold_4845:9749129-9749322 - der-mir-286 Known_mirbase CAAA-TC------AAC--AA----CAA-------ATG---------CAGAGTAAGTGTTA-T-AGGCACTGCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AGAA---------GGTT----TCGATC-----GA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA--------C----------------------TGT--------GAA-GTT-GCGAGTGA--------------AAAC------------A-AA-------AG------------------AT---AC-----------TGTAG
droYak3 2R:13623711-13623910 + dya-mir-286 Known_mirbase CAAA-TC------AAC--AG-----TA-------ATG-CAAAAGAGAAGAGTAAGTGTTA-T-AGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AAGA---------GGTT----TCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------GAA-GTT-GCAAGTGA--------------AATT--------------A-----ATCAG------------------AT---AC-----------TGGGG
droEug1 scf7180000409474:2396822-2396991 + TAAA-C--------------------------------------TGAAAAGTAAGTGATAAT-TGGCAATCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA----AC-----------G-----------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA--------------------------------GT--------GAAAGTT-AAAAAGCA--------------AAAA------------T-AA-------AG------------------A----TC-----------TAAAA
droBia1 scf7180000302143:3059780-3059968 - AAAC-TG------AAA--AATAC-----------GTG--------CCAAAGTAAGTGAGAA---GGGCCTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AC-----------GGTG----ACGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA--------------------------------GT--------GAA-GTT-AAAGGTGC--------------AAGT-----------------------------------------------------GGGCCATCAAACT
droTak1 scf7180000415384:84002-84199 + CAAA-GA------AAT--AAT---------------C--------TCAAAGTAAGTGATACC-AGGCTCTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AC-----------GATT----ACCATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA--------------------------------GT--------GAA-GTT-AA-AGTTA--------------AAGT------------T-A-----AT--GT------------------G---AATGTAGGCAATCTAACT
droEle1 scf7180000491201:2013953-2014147 - TCAA-CC------ATACAAAGCCA----------ATA--------CAAAAGTAAGTGATAAT-CGGTGCTCCAG---------------------------------------------------------------------TTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA----AT-----------GGTT----TCGACC-----AA---GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA--------------------------------GT--------GAT-GTTTTTTAGTGA--------------AAG------------------------------------------------------AGGCAATCCCCAA
droRho1 scf7180000780066:73611-73803 + CAAC-C-------ATATAAATACA----------ATA--------CAAAAGTAAGTGATAAT-TGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT----AC-----------GGTT----CCGACC-----AA---GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA--------------------------------GT--------GAA-ATT-ATTAGTGA--------------AAAG-----------------------------------------------------AAGACATCCAAGA
droFic1 scf7180000454039:848011-848186 - CAAA-CA------AAC------CAATA-------ATC---------C--AACAAGTGAACTTAAGGCTCATCAG----------------------------------------------------------------------TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA----AC-----------ATTT----CCTTTC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG--------------------------------GT--------GAA-GTT-ACCAGTGA--------------AAAA------------------------------------------------------------------
droKik1 scf7180000302679:89323-89538 - CAACAGCAGCACCAAG----------AAAGTAAAGTTCCAAAAGTGAAAAGAAACAGCTAAT-T-----ACCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA----ACCA---------GGTT----CCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAG--------------------------------GGGATAAAGTGCA-GTT-GTAA---C---------AAGT-TAAT------------ATA-----TCCAA------------------A-----------------CAAGG
droAna3 scaffold_13266:9731320-9731519 + dan-mir-286 Known_mirbase CAAT-TC------ATC--A---------------------------AATTGTAAGTGATTTT-TAGCATCAGAA----------------------------------------------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCAC-AAAAA----AATT---GGTT----ACCAAC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA---------A---------GTGACTTGGAAATGT--------AAA-GTT-T-----------------------------------------------CAA----------------ATAATATAC------CAA--TATAA
droBip1 scf7180000396427:874292-874478 + AACA---------AAG--AATCCAGT----------------CATCAAATGTAAGTGGTTAT-TAGCATCAGAA----------------------------------------------------------------------TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACAAAAG-----------GGTT----TCCATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA---------A----------------------GT--------G----TT-T-----------------------------------------------CAA----------------ATAGTGTTT-----------CTTAA
dp5 3:12677502-12677742 - dps-mir-286 Known_mirbase AACA-A---------G----------------------------------------------------------TGTACAAGAATGGCGATA----AA----------GTG-----TGTGTGTCGCAGAAAAA-GAAGACA-AATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC----AG-----------GGTT----CCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCAA------CCAGTGACGAAAGTGAC----------------------------------------AAAAG--T----GAAAAAAGTGACA-AAGTTTGT--GTACACTCCACGAGTTGATAC---CT-----------TATTG
droPer2 scaffold_2:8905924-8906164 + dpe-mir-286 Known_mirbase AACA-A---------G----------------------------------------------------------TGTACAAGAATGGCGATA----AA----------GTG-----TGTGTGTCGCAGAAAAA-GAAGACA-AATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC----AG-----------GGTT----CCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCAA------CCAGTGACGGAAGTGAC----------------------------------------AAAAG--T----GAAAAAAGTGACA-AAGTGTGT--GTACACTCCACGAGTTGATAC---CT-----------TATTG
droWil2 scf2_1100000004514:1651692-1651924 - dwi-mir-286 Known_mirbase CATA-TC------AAC-----CCAAAAAGTTAGCCAACCAAA----CTTAGTGAGTGACTAT---GCAATTGAA----------------------------------------------------------------ATT-ACTTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA----AAAA--TCTTGTTTGTTTTTGCCAATC-----TAATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC-------------------------------AAC--------CAA-CAA-GCTAGTGAG-----AAGAATT-AACT------------TTA-----ACCAA------------------A-----T-----------GGCGG
droVir3 scaffold_12875:4112074-4112309 + dvi-mir-286 Known_mirbase CAGT-GT------GAC--AG----------------------------------------------TGTTCCAG--------TAT-----TC----CA----------GTG-----TTTCAATTCCAATAT------TCCAGTATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA----ACAA---------TATA----CCATTA--TCTAT---ATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATAAAAAGCACAA---------GTTCT----------------------------------------CGATT--T----GATAACCGTCGCA-ATATATAT--ATATA---TATATATCTATAT---CA-----------TATAG
droMoj3 scaffold_6496:20936711-20936918 - dmo-mir-286 Known_mirbase CATT-TC----------------------------------------------------------------CAGTGTTCGAAAATTA----------------------------------------------------TAAAATTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA----CATA---------TACA----CCAAACATTCTAT---ATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCAA----------T-------------------TAT--------AAA-ATT-TCTAGTGCATGGTTCA------AACTTAAAAAGAAAACA-AA---------------------ATCTATAT---CG-----------TATAG
droGri2 scaffold_15112:2108756-2109001 - dgr-mir-286-1 Known_mirbase AAAG-AA------AAG--AATATAAA----------------A-----------------------------------------TGGTGAATTTTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTGCAGTCAAACCCAGCCAGTATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAAC-----CTAAACTCT---ATAT----ACAATA----TAT---ATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA-------TCAGTTTTG----------------GT--------TAA-ATG-AAAAATGA--------------TAAA------------T---------CG-------------ATCTATAT---TT-----------TATAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAAA-TC------AAC--AATCCAAA----------------AAGCAAGAGTAAGTGATATT-GGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAAGAAA-----------GGTT----TCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------GAA-GTT-GCAAGTGA--------------AACT------------T---------CAA----------------ATAT---TC-----------TGTGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................2311382795.001382795251910879609732122304085121213235111035311169942314100
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................231113758.001137583351081128210003113785026800000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22169704.00697042838646695171922272860658882781634000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................23154047.00540478652537391002160016000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................1914915.0049151994845135008191500000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2414724.0047241210225250015101138742053901000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2114456.004456281325101132410844582143900000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..........................................................................................................................................................................2213354.00335495333800000000200000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................2412731.00273141978000211386276119000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................2311653.00165341164700000000100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................2511566.00156611701006065875207700000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................2211150.0011508278700000119033102000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................221976.009761147610014324822201000000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221722.0072211557150010343407900000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201603.00603813100315511057817501000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................231478.004781132200063635902300000
....................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGATC-----A..........................................................................................................................................................................................................241299.002990029010000340100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTC..............................................................................................................................................................................181266.00266002070325008230000000
....................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGATC-----AA---G.....................................................................................................................................................................................................261171.001710016000000370100000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................211170.001700010100000251403000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................241137.00137017700010191502400000
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................201124.00124007300000201201900000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................221121.001218285000116501300000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................19196.0096002500010191603500000
...............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.........................................................................................................................................................................18181.008110370000019143700000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................24174.0074006400000350200000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.........................................................................................................................................................................22167.0067006700000000000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTC.......................................................................................................................................................................................................................................................21159.00590029001201590300000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC......................................................................................................................................................................................................................................................22158.0058005800000000000000
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...........................................................................................................................................................................23149.004900130000021150000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..........................................................................................................................................................................22145.00451060000024140000000
.........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................24145.0045004100000200200000
....................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGATC-----AA---GCG...................................................................................................................................................................................................28137.0037003000010510000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG.........................................................................................................................................................................23136.00360020000000001600000
....................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGAT.................................................................................................................................................................................................................22136.0036003300000110100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG............................................................................................................................................................................20136.0036003600000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................24135.0035003000000110300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACT...............................................................................................................................................................................17134.0034000000108250000000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................21133.0033002400000410400000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG.........................................................................................................................................................................22132.0032003200000000000000
............................................................................................................................................................ATGGCGAATGTCGGTATGGTC.........................................................................................................................................................................................................................................................21129.00290015000000101300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................23127.0027002400000000300000
.................................................................................................................................................................................................................................................ACCGAACACTCGTGCT.........................................................................................................................................................................16127.0027000000001980000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACAC................................................................................................................................................................................16125.00250000000010150000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCT........................................................................................................................................................................................................................................................20115.001500900010220100000
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT............................................................................................................................................................................22115.0015001000000000500000
droSec2
CAAA-TC------AAC--AATCAAAA----------------AATCAAGAGTAAGTTATATT-GGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA-ATAAA-----------GGTT----TCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------GAA-GTT-GCAAGTGA--------------AACT------------T---------CAA----------------ATAT---TC-----------TGTGGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................231271567.002715671362212640486136
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22110716.001071666310498149
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2412288.00228873225523
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2111158.001158102112818
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................231482.004824046612
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................221440.00440114326
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................241333.00333603189
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221204.002041030992
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................251192.00192201873
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201140.00140221333
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................23188.008841785
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21173.007340681
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................23152.005210510
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................24148.004800471
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..........................................................................................................................................................................22145.004540392
....................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATC-----AA---GCG...................................................................................................................................................................................................27134.003420311
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................22132.003250270
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................22122.002202182
...............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.........................................................................................................................................................................18121.002100210
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20121.002110200
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................19120.002010190
....................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATC-----AA---GC....................................................................................................................................................................................................26118.001800180
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTC..............................................................................................................................................................................18116.001630130
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................19116.001610150
....................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATC-----AA---G.....................................................................................................................................................................................................25112.001200120
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT............................................................................................................................................................................2219.0090090
............................................................................................................................................................ATGGCGAATGTCGGTATGGTC.........................................................................................................................................................................................................................................................2119.0090081
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................2419.0091080
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................2117.0072050
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.........................................................................................................................................................................2316.0060060
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCTCT...........................................................................................................................................................................2116.0061041
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................2315.0050050
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT..........................................................................................................................................................................2214.0040040
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT...........................................................................................................................................................................2113.0030030
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT..........................................................................................................................................................................2213.0030030
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................2413.0030030
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT........................................................................................................................................................................2413.0030021
..............................................................................................................................................................GGCGAATGTCGGTATGGTCT........................................................................................................................................................................................................................................................2013.0030030
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA.......................................................................................................................................................................2513.0030030
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...........................................................................................................................................................................2313.0030030
....................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATC-----AA---GCGA..................................................................................................................................................................................................2812.0020020
....................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATC-----A..........................................................................................................................................................................................................2312.0020020
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2212.0020020
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2312.0020020
dm3
CAAA-TC------AATTAAATCAAAA----------------AATCAAGAGTAAGTGATATT-GGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-AGAAA-----------GGTT----TCGATT-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------AAA-GTT-GCGAGTGA--------------AAAT------------T---------AAA----------------ATAT---TA-----------TGGAGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................231525385.0052538500001844492491179644580310000000150094021181100107123122121319641123116271130002830000000000000000005431528573130591871321553705829104251310212210513823417245933700554163110617284194130431747304473416410201311974721110000025110098522175144797567043979747361422316330970102650415035101026004113118241811147801225711590005072102102163170000003013724244844828281448487482623146306000009401128001087726728710417412145254925398772141225101851011117538195281574923038250128161353514111720659313929815573919202151438155920102739133268554211331714564181459243861062591524831801441731980
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................22145803.00458030000402895253516000000000000000000000000300000000000000000100000000000000000000000101001034815757615729812144401600421422010331029142114211860260073055191024000000000000100000000000821058116736470100010000000000000100020200000100000000000000000000000805000200000000000010011170110010000073640000000000000000010001000000210000000402000000110132524201400000000000120011000100000001120200000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22124186.00241860000011391136811100000000001001000000005101021032032000072100080000000000000000000000004322323887804500116400111249610618631623104540229093013000212000000000000100167215993818229020524100041644630005000901600003202001200051012120300010000801113000000100651166972611652730641412190000101512350132129120205601381851042161310029210313420221015011525132512316541150020200006031210912053023942225444886747254531310
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2118414.0084140000001314120000000000000000000000003493000000010111000110000010000000000000000000000003935381311100001202100311820001040006751016001000000010000000000000270331549243927000140000000000000101000001001000100001021000000000000000500000000000101116100421220002000024833800100001002000031601000110200130202701211028010413111162952010300113202001110100702014013112911102143130
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2415866.0058660000003201770000000000000000000000000000000000400100000000000000000000000000000000034318415528240000210001013302600301411000149342340100001010001000000000001263267255063040001000000000000000000010010010100000010120010000000000000100000000000011112056020300200001052070010001010400000110000000101021021221116132100030102035247004000010010031004042112300001259150112270
..............................................................................................................................................................GGCGAATGTCGGTATGGTCT........................................................................................................................................................................................................................................................2015774.0057740000000410000000000000000000000000540200000000000000000000000000000000000000000000006012270000000010000000000001000400000000000000000000000000017191464000000040000000000000000000000000000000000000000000000000000000000000000000000000000000003400000000000000000000000000000000000000000000000002303200000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................2014804.004804000000000000000000000000000000000025930000001003000000000000000000000000000000000000517200000100000010000000000000120000000000000000000000000010157119889250000000000000040610000000000000000000020100000000000000002100200000000030500070300000000809200100100000001021000000000000600026010103010010021937465501011000010000018219130124034160721141421150
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................2313154.00315400000015513810000000000000000000000000000000000000000000000000000000000000000000000002491499814136003002000001001700009170008112043000000001000000000000000961593422562200000000000000000000000000000000000000000200000000000000000000000000000000001036110000000003568000000000020000250000000000000000201150300000000110517700000000000101000100000010000001040001020
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTC.......................................................................................................................................................................................................................................................2112028.00202800000069220000000000000000000000001000000010000000000000000000000000000000000000016027216720200000200000000000200273300028103000000000100000000000000013789732410000000000000000000000000000000000000000000000000000020000000000000010000000010200000000138000000000000000000000010000000000000100000000000111192400600001000000000000000000010000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................2411874.0018740000006192100000000000000010000000000200000000000000000004000000000000000000000000152111487625000002002000000000008700059502700000000000000000000000057151359108181000020030000000000000000000000000000000000000000000000000000000000000000131317321620001100305200000000000000021000000000000101110415040000000103812000000000000000000010000010000000150001000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................2511018.0010180000002102000000000000000000000000000000000000000000000000000000000000000000000000926825491600000000100000000000010003100400000000000000000000000014356519200000100000000000000000000000000000000000200000000000000002000000000000000403070023100010002419000000000000000000000000000000000000010000000000038433000020000000000000000000000000000120000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................231501.005010000101478517000000000000000000000000001000000000000000000000000000000000000000000003877108001000000000100100001400082032001000000000000000000000317423740000000000000010000000100000000000100000000000000000000000000000000000000000008011001000069000000000000000000000000000000002200001600000100073900000000000000000000000001000000000001000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................191419.0041900000000000000000000000000000000001650100000000000000000002000000000000000000000000500000000000010000100000020000410700000000000000000000000011715120300000000000000000000000000000000000000000000000000000000000000000030000001000300000000008220000000000000000100000000000000000020000000000000845410000000000000000100000000000100100000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................231390.00390000010299100000000000000000000000000000000000000000000000000000000000000000000000101212170000000000000000000054000261031000000000000000000000000926397840000000000000000000000000000000000100000020000000000000000000000000000000000000010000000036000000000010000010001000000000000000000000000000065200000000000000000000000000000000010000100
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221359.003590000001420000000000000000000000000000000000000000000000000000000000000000000000003125162010000000000000000000000000170090010000000000000000000003818160000000000000000000000230000000100000000006000000000000000000000000000000000000210800000000470000000000000000200000000000000000000300000000000121900000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................221268.0026800000002340000000000000000000000000000000000000000000000000000000000000000000000074131300000010000011000000000000720000000000000000000000000011317304100000000000000000000010000000000010000000000000000000000000000000000000000000303000100001390000000000100001700001000000000000010000000000000741400000000000000000000000020000100800011100
....................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATT-----AA---GCG...................................................................................................................................................................................................271195.0019500000000000000000000000000000000000000000000000000000000000000000000000000000000080500000000000000000000000000000000000000000000000000000000436010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000110000000000000000000000000000000000000000000000000163200000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................241188.00188000000020000000000000000000000000000000000000000000000000000000000000000000000000121183020000000000000000000001000100000000000000000000000000006824900000000000000000000000000000000000000000002000000000000000000000000000000010001010000000026000000000000000000000000000000000001000000010000043600000000000000000001000000000000000000000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................211160.0016000000000100000000000000000000000000000000000000000000000000000000000000000000000090372000000000000200000000000021030000000000000000000000005491000000000000000000000000000000000000000000100000000000000000000000000000001000000300000000670000000000000000300000000000000002000000000000000701600000000000000000000000000000000020000000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................191141.00141000000000000000000000000000000000000000000000000000000000000000000000000000000000130161000000000010012010000000000400000000000000000000000000031620800000000000000000000000000000100000000000000000000000000100000000000000000000000000000000055000000000000000000000000000000000000000000000000033100000000000000000000000000000000000000000
............................................................................................................................................................ATGGCGAATGTCGGTATGGTC.........................................................................................................................................................................................................................................................211125.001250000000000000000000000000000000000000000000000000000000000000000000000000000000006032000000000000000000000000000000000000000000000000000000152840000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000080900000000000000000000000000000000020000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC......................................................................................................................................................................................................................................................221123.00123000000461100000000000000000000000000000000000000000000000000000000000000000000000309032000000100000000000000140000002000000000000000000000000014600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000029000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................201121.001210000000110000000000000000000000000200000000000000000000000000000000000000000000001128410000000000000010000000000400300000000000000000000000011591170000000000000000000000000000000000000000000000000000000000000000000000000000001000000000036000000000000000000000000000000000000000000000000026400000000000000000000000000000000000000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTC.........................................................................................................................................................................................................................................................191113.001130000000000000000000000000000000000240000000000000000000000000000000000000000000000300020000000000000000000000000000000000000000000000000000040157000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000019200000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.........................................................................................................................................................................18197.00970000000000000000000000000000000000000000000001000000000000000000000000000000000001034110000000000014110000000000010000000000000000000000000081025010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000200000000000000016200000000000000000000000000000000000000000
..............................................................................................................................................................GGCGAATGTCGGTATGGT..........................................................................................................................................................................................................................................................18193.009300000000000000000000000000000000000000000000000000000000000000000000000000000000050001000000000000000000000000010000000000000000000000000001752000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000059100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTATC......................................................................................................................................................................26190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................22180.0080000000111117000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000001000000000000000000000000000213500000000000000000000000000000000000000000000000000000000000000000000000000000001010000000053000000000000000000000000000000000000000000000000021200000000000000000000010000000000000000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCTT.....................................................................................................................................................................................................................................................23176.0076000000000000000000000000000000000000000000000000000000000000000000000000000000000118161160000000000000001000002000100100000000000000000000000005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
.............................................................................................................................................................TGGCGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................23165.006500000001000000000000000000000000000000000000000000000000000000000000000000000000016001600000000000000000000800000006000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000023100000000000000000000000000000000000000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCA......................................................................................................................................................................................................................................................22157.005700000061011000000000000000000000000000000000000000000000000000000000000000000000001910020000000000000004000005000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCTA.....................................................................................................................................................................................................................................................23156.005600000001000000000000000000000000000000000000000000000000000000000000000000000000075001100000000000000000000400000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000
....................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATT-----AA---G.....................................................................................................................................................................................................25155.00550000000000000000000000000000000000100000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000223001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000035600000000000000000000000000000000000000000
...............................................................................................................................................................GCGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................21154.005400000002000000000000000000000000000000000000000000000000000000000000000000000000080101100000000000010000000040001006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTC..............................................................................................................................................................................18146.00460000000000000000000000000000000000000000000010000000000000000000000000000000000007010000000000000000000000000001004000000000000000020000000111001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000091300000000000000000000000000000000000000000
................................................................................................................................................................CGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................20141.0041000000100000000000000000000000000020000000000000000000000000000000000000000000000620170000000000000000000014000100300000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
....................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATT-----AA---GCGA..................................................................................................................................................................................................28135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000
.............................................................................................................................................................TGGCGAATGTCGGTATGGTCTC.......................................................................................................................................................................................................................................................22135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000001081000000000000010000000000000004000000000000000000000000001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................23134.00340000002000000000000000000000000000000000000000000000000000000000000000000000000002113000000100000000000000000000001000000000000000000000000102300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000014100000000000000000000000000000000100000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCG......................................................................................................................................................................................................................................................22134.003400000003000000000000000000000000000000000000000000000000000000000000000000000000010011200000000000000010000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................24134.0034000000010000000000000000000000000020000000000000000000000000000000000000000000000901000000000000000000000000000000000000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005100000000000000000000000000000000000000000001000006200000000000000000000000000000000000000000
....................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATT-----AA---GC....................................................................................................................................................................................................26132.00320000000000000000000000000000000000000000000000000010000000000000000000000000000000051000000000000000000000000000000000000000000000000000000039000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA.......................................................................................................................................................................25129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000203100000000000000000000002000100000000000000000000000000001200100000000000000000000000000000000000000000000000000000000000000000000000001000904000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................GAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................19127.00270000000000000000000000000000000000100000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000155000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...........................................................................................................................................................................23127.0027000000030200000000000000000000000000000000000000000000000000000000000000000000000221700000000000000000000000000320000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCTC.....................................................................................................................................................................................................................................................23125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000005080000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEre2
CAAA-TC------AAC--AA----CAA-------ATG---------CAGAGTAAGTGTTA-T-AGGCACTGCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AGAA---------GGTT----TCGATC-----GA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA--------C----------------------TGT--------GAA-GTT-GCGAGTGA--------------AAAC------------A-AA-------AG------------------AT---AC-----------TGTAGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................231107629.001076293537544691495304817
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................23110737.001073719105590158010
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................2219280.0092801836142029420130
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2411090.001090457390302130
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................211930.00930534500427000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221335.0033528225028000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................221287.002872750210000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................231157.00157015700000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................231150.00150067083000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201142.001421230116020
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................22193.0093206409000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................24185.00851351021000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................24183.0083161021000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21154.0054926019000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................22137.0037126010000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................23131.0031216011020
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC......................................................................................................................................................................................................................................................22125.002502500000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................19124.002401806000
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20120.00207508000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................23117.001701403000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................19116.001621013000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................21114.00149401000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................25112.00121209000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..........................................................................................................................................................................20111.00113305000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..........................................................................................................................................................................2219.0093600000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................2419.0095202000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................2417.0070304000
droYak3
CAAA-TC------AAC--AG-----TA-------ATG-CAAAAGAGAAGAGTAAGTGTTA-T-AGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AAGA---------GGTT----TCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------------------------GT--------GAA-GTT-GCAAGTGA--------------AATT--------------A-----ATCAG------------------AT---AC-----------TGGGGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................2311113308.00111330841019110027701097537210740010
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................231264917.002649177702646062340000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22156464.005646457125223441544300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................24112894.001289441122915941300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................2314780.00478010477630000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................2212118.002118212088270000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................2311773.0017731501702541100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................2411451.001451001425250100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................2211083.001083107882940000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................211892.00892336732111100000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC......................................................................................................................................................................................................................................................221709.007090070900000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................241530.0053010464650000000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221468.0046809416420100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................231213.002130021210000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................221203.002030019580000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................191195.001954018920000000
..............................................................................................................................................................GGCGAATGTCGGTATGGTCTC.......................................................................................................................................................................................................................................................211169.001690016540000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................231168.0016802146191000000
.........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................241136.001360013420000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201118.001181087300000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..........................................................................................................................................................................221115.001150011500000000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.........................................................................................................................................................................22195.0095009500000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................24177.0077007160000000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................19175.00750059150100000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21168.00680047201000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................25157.00570128270100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC.........................................................................................................................................................................23155.0055005500000000
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20154.0054004860000000
droEug1
TAAA-C--------------------------------------TGAAAAGTAAGTGATAAT-TGGCAATCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA----AC-----------G-----------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA--------------------------------GT--------GAAAGTT-AAAAAGCA--------------AAAA------------T-AA-------AG------------------A----TC-----------TAAAASizeHit CountTotal NormTotal
No Reads
droBia1
AAAC-TG------AAA--AATAC-----------GTG--------CCAAAGTAAGTGAGAA---GGGCCTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AC-----------GGTG----ACGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA--------------------------------GT--------GAA-GTT-AAAGGTGC--------------AAGT-----------------------------------------------------GGGCCATCAAACTSizeHit CountTotal NormTotal
No Reads
droTak1
CAAA-GA------AAT--AAT---------------C--------TCAAAGTAAGTGATACC-AGGCTCTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA----AC-----------GATT----ACCATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA--------------------------------GT--------GAA-GTT-AA-AGTTA--------------AAGT------------T-A-----AT--GT------------------G---AATGTAGGCAATCTAACTSizeHit CountTotal NormTotal
No Reads
droEle1
TCAA-CC------ATACAAAGCCA----------ATA--------CAAAAGTAAGTGATAAT-CGGTGCTCCAG---------------------------------------------------------------------TTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA----AT-----------GGTT----TCGACC-----AA---GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA--------------------------------GT--------GAT-GTTTTTTAGTGA--------------AAG------------------------------------------------------AGGCAATCCCCAASizeHit CountTotal NormTotal
No Reads
droRho1
CAAC-C-------ATATAAATACA----------ATA--------CAAAAGTAAGTGATAAT-TGGCACTCCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT----AC-----------GGTT----CCGACC-----AA---GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA--------------------------------GT--------GAA-ATT-ATTAGTGA--------------AAAG-----------------------------------------------------AAGACATCCAAGASizeHit CountTotal NormTotal
No Reads
droFic1
CAAA-CA------AAC------CAATA-------ATC---------C--AACAAGTGAACTTAAGGCTCATCAG----------------------------------------------------------------------TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA----AC-----------ATTT----CCTTTC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG--------------------------------GT--------GAA-GTT-ACCAGTGA--------------AAAA------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CAACAGCAGCACCAAG----------AAAGTAAAGTTCCAAAAGTGAAAAGAAACAGCTAAT-T-----ACCAG----------------------------------------------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA----ACCA---------GGTT----CCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAG--------------------------------GGGATAAAGTGCA-GTT-GTAA---C---------AAGT-TAAT------------ATA-----TCCAA------------------A-----------------CAAGGSizeHit CountTotal NormTotal
No Reads
droAna3
CAAT-TC------ATC--A---------------------------AATTGTAAGTGATTTT-TAGCATCAGAA----------------------------------------------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCAC-AAAAA----AATT---GGTT----ACCAAC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA---------A---------GTGACTTGGAAATGT--------AAA-GTT-T-----------------------------------------------CAA----------------ATAATATAC------CAA--TATAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................23141249.004124961228095121135643330
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................2317839.0078391780729002
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................2214133.0041336732298071326
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................241568.0056819431111214
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................211376.003762225189509
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................231134.0013401340000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................22170.007003633001
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................20170.007012336055
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................22170.007049147000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................23167.006704621000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................24160.00601509000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................24145.00452358000
..............................................................................................................................................................GGCGATTGTCGGTATGGTCGCT......................................................................................................................................................................................................................................................22138.00381343000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................19133.00331311000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21132.00324197002
..............................................................................................................................................................GGCGATTGTCGGTATGGTCGC.......................................................................................................................................................................................................................................................21128.00281260001
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................22122.00220201001
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................23122.00220165100
..............................................................................................................................................................GGCGATTGTCGGTATGGTCGCC......................................................................................................................................................................................................................................................22117.00170170000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................21115.00151131000
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20111.0011065000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................2318.008062000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..........................................................................................................................................................................2217.007070000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTC..............................................................................................................................................................................1816.006051000
.............................................................................................................................................................TGGCGATTGTCGGTATGGTCGC.......................................................................................................................................................................................................................................................2215.005041000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................2515.005014000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................1915.005050000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..........................................................................................................................................................................1815.005041000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...........................................................................................................................................................................2014.004310000
....................................................................................................................................................................................TTTTCAC-AAAAA----AATT---GGTT----ACCAAC-----...........................................................................................................................................................................................................2614.004040000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.........................................................................................................................................................................2214.004040000
....................................................................................................................................................................................TTTTCAC-AAAAA----AATT---GGTT----ACCA..................................................................................................................................................................................................................2414.004040000
....................................................................................................................................................................................TTTTCAC-AAAAA----AATT---GGTT----ACC...................................................................................................................................................................................................................2314.004040000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC.........................................................................................................................................................................2314.004040000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT...........................................................................................................................................................................2114.004002011
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCC.........................................................................................................................................................................2114.004040000
droBip1
AACA---------AAG--AATCCAGT----------------CATCAAATGTAAGTGGTTAT-TAGCATCAGAA----------------------------------------------------------------------TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACAAAAG-----------GGTT----TCCATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA---------A----------------------GT--------G----TT-T-----------------------------------------------CAA----------------ATAGTGTTT-----------CTTAASizeHit CountTotal NormTotal
No Reads
dp5
AACA-A---------G----------------------------------------------------------TGTACAAGAATGGCGATA----AA----------GTG-----TGTGTGTCGCAGAAAAA-GAAGACA-AATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC----AG-----------GGTT----CCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCAA------CCAGTGACGAAAGTGAC----------------------------------------AAAAG--T----GAAAAAAGTGACA-AAGTTTGT--GTACACTCCACGAGTTGATAC---CT-----------TATTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................231197384.00197384133833115522589773971221015
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22199256.009925622251671405629785011218
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................23129723.00297230172935012922700000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................21113749.00137490106060060667701050
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................2214474.00447408615280285900001
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2412419.0024190801631670100010
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201946.00946028163075401000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................231781.00781007801000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................221425.0042501032109400000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221385.0038503113703700000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT......................................................................................................................................................................................................................................................221347.0034701626306800000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................231324.0032402122118100000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................231287.002870119868200000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................241287.002870325412801000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................241273.00273013152010800000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................211239.0023902042001500000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................191206.002060615414500000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCGC.......................................................................................................................................................................................................................................................211163.001637211902504060
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................231124.001240110901400000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC......................................................................................................................................................................................................................................................221106.00106001050100000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...........................................................................................................................................................................20193.009308820300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..........................................................................................................................................................................22145.004502803500000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC...........................................................................................................................................................................21142.004200360600000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21138.0038091701200000
....................................................................................................................................................................................TTTTACC----AG-----------GGTT----CCGATC-----AA---GCGAAG................................................................................................................................................................................................27134.003400300400000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCG........................................................................................................................................................................................................................................................20131.003113901215000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC............................................................................................................................................................................20129.002900260300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA...........................................................................................................................................................................21129.002900200900000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..........................................................................................................................................................................20121.002109201000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.........................................................................................................................................................................23120.0020001001000000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..........................................................................................................................................................................18120.002002101700000
droPer2
AACA-A---------G----------------------------------------------------------TGTACAAGAATGGCGATA----AA----------GTG-----TGTGTGTCGCAGAAAAA-GAAGACA-AATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC----AG-----------GGTT----CCGATC-----AA---GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCAA------CCAGTGACGGAAGTGAC----------------------------------------AAAAG--T----GAAAAAAGTGACA-AAGTGTGT--GTACACTCCACGAGTTGATAC---CT-----------TATTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................231112653.0011265392737218192824220192
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22137199.0037199307858362931316
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................2317731.0077317692038010
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2116311.00631149963412270486
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................2313635.0036353609024020
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..........................................................................................................................................................................2212076.002076206907000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................2211969.00196913842583000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................241665.006655104143080
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................191653.0065364417010
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201533.005333821146031
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................221378.00378363213000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCGC.......................................................................................................................................................................................................................................................211160.00160134040022
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT......................................................................................................................................................................................................................................................221109.0010998011000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................22194.009461248010
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................23187.00878601000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................24186.008669017000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................23182.008254025030
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTC..............................................................................................................................................................................18165.00656500000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................24146.00464204000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG............................................................................................................................................................................20141.00414100000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCG........................................................................................................................................................................................................................................................20135.00353003002
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21133.00332229000
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20124.00242301000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................21123.00231364000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................24119.00191306000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................19113.0013508000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA.........................................................................................................................................................................23112.00121200000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC......................................................................................................................................................................................................................................................22110.00101000000
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..........................................................................................................................................................................1819.009009000
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..........................................................................................................................................................................2018.008602000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...........................................................................................................................................................................2018.008431000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA...........................................................................................................................................................................2118.008602000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.........................................................................................................................................................................2317.007403000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCG........................................................................................................................................................................2416.006600000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC............................................................................................................................................................................2016.006600000
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.........................................................................................................................................................................2215.005500000
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC..........................................................................................................................................................................1915.005302000
...............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.........................................................................................................................................................................1814.004301000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCT.............................................................................................................................................................................1914.004400000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC...........................................................................................................................................................................2114.004103000
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...........................................................................................................................................................................2313.003012000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGG.........................................................................................................................................................................2313.003300000
..............................................................................................................................................................GGCGATTGTCGGTTTGGTC.........................................................................................................................................................................................................................................................1913.003200001
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG.........................................................................................................................................................................2213.003300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC........................................................................................................................................................................2413.003300000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................2413.003300000
droWil2
CATA-TC------AAC-----CCAAAAAGTTAGCCAACCAAA----CTTAGTGAGTGACTAT---GCAATTGAA----------------------------------------------------------------ATT-ACTTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA----AAAA--TCTTGTTTGTTTTTGCCAATC-----TAATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC-------------------------------AAC--------CAA-CAA-GCTAGTGAG-----AAGAATT-AACT------------TTA-----ACCAA------------------A-----T-----------GGCGGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................231463839.00463839674107864596932388
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22146657.0046657142175046072268
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................2215681.0056818100564617
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2415244.0052444211520414
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2115172.00517221320510118
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................2411257.001257016012392
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................231683.0068376106006
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201590.005901015799
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................231568.005680705592
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221367.0036719202731
..............................................................................................................................................................GGCGATTGTCGGTATAGTCTCT......................................................................................................................................................................................................................................................221292.002920002911
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.........................................................................................................................................................................231143.001430001430
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................231114.001142200920
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................241100.00100110980
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................22196.0096110940
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..........................................................................................................................................................................22192.0092000920
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT............................................................................................................................................................................22187.0087000870
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21172.0072030690
..............................................................................................................................................................GGCGATTGTCGGTATAGTCTC.......................................................................................................................................................................................................................................................21172.0072000720
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG...........................................................................................................................................................................23153.0053010520
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................25152.0052000520
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................21137.00370140230
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................24137.0037010360
...............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT.........................................................................................................................................................................18128.0028000271
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT........................................................................................................................................................................24126.0026010250
...........................................................................................................................................................AATGGCGATTGTCGGTATAGTC.........................................................................................................................................................................................................................................................22124.0024000240
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................19123.0023000221
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................19122.0022410170
................................................................................................................................................................CGATTGTCGGTATAGTCTCTTT....................................................................................................................................................................................................................................................22120.0020000200
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20119.0019000190
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................23118.0018000180
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..........................................................................................................................................................................22117.0017100070
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTA........................................................................................................................................................................23117.0017030140
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT........................................................................................................................................................................23115.0015030120
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC...........................................................................................................................................................................21114.0014000140
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCTGC...........................................................................................................................................................................21113.0013000130
...........................................................................................................................................................AATGGCGATTGTCGGTATAGT..........................................................................................................................................................................................................................................................21111.0011000110
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................24111.0011000110
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC..........................................................................................................................................................................20110.001001090
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT...........................................................................................................................................................................21110.0010000100
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC..........................................................................................................................................................................1919.00901080
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTAT..........................................................................................................................................................................2218.00800080
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG.........................................................................................................................................................................2318.00800080
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT..........................................................................................................................................................................2218.00800080
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCG.............................................................................................................................................................................2117.00700070
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCGT........................................................................................................................................................................2416.00600060
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT..........................................................................................................................................................................2216.00600060
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTC..............................................................................................................................................................................1815.00503020
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGC..........................................................................................................................................................................1815.00501040
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGT..........................................................................................................................................................................2115.00502030
.........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................2415.00502030
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG...........................................................................................................................................................................2014.00402020
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTAT........................................................................................................................................................................2414.00400040
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC........................................................................................................................................................................2414.00420020
.........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTG...........................................................................................................................................................................2214.00401030
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTGA..........................................................................................................................................................................2414.00400040
........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTT...........................................................................................................................................................................2314.00400040
..............................................................................................................................................................GGCGATTGTCGGTATAGTCTCTT.....................................................................................................................................................................................................................................................2314.00400040
.......................................................................................................................................................................................................................................AAGTGACTAGACCGAACACTCGT............................................................................................................................................................................2314.00400040
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT..........................................................................................................................................................................2214.00400040
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA...........................................................................................................................................................................2113.00300030
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA.........................................................................................................................................................................2313.00300030
droVir3
CAGT-GT------GAC--AG----------------------------------------------TGTTCCAG--------TAT-----TC----CA----------GTG-----TTTCAATTCCAATAT------TCCAGTATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA----ACAA---------TATA----CCATTA--TCTAT---ATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATAAAAAGCACAA---------GTTCT----------------------------------------CGATT--T----GATAACCGTCGCA-ATATATAT--ATATA---TATATATCTATAT---CA-----------TATAGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................2312436012.00243601271716461968720113010036335842141414210542562106931859116038191995114939761017122119616719622587918222315371629890114230826462312211078624908047251036028924173063299209540014372398629064112856946104861788420453227931018411169
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................22144003.0044003821106656200000000291001000300010000031601927674200524154305922253161255121084079211638541863125013859859203038146600000156176742101366911669614593334379
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................23116543.001654370226013539000000000000000000000000000000104200001526115424918216127315224310749767200014966000002010296300000921933712
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................19115114.00151148802100000000000000000000000000000000310037741456115514601137993208996718768185196005514501218100000710350011012118201610
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................23110567.0010567546501370000000001000000000000000000000010003545904655102284053810405631125703416623503420119647100001435000001971322
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................2217294.0072943307400000000001000000000000000001007812120145833623253742336563540677831123223017820059149800000252313014100310114512076106
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2416460.00646041116800000000012000100010000000000190297813254100092322133002432384542434072401631751591004154871200020281203022009467693336
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................2415195.005195020107500000000000000000010000012001003150003262732244013071643192684752621611791441005631830200013142740002116273357
..............................................................................................................................................................GGCGATTGTCGGTATGGTCGCT......................................................................................................................................................................................................................................................2212134.00213400085000000001700000000000000000060641232585990000201601021142712011100014400000404516200203011853587578
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................2411732.00173201118900000000000001010000000010002502267118100000071038910990721285510048302821000316200000148600422103535391419
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2111460.00146010140294000000000100010020000000442122410148010063942475747575079403038280008618910000612462130433840432824
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................2311130.001130000830000000000000000000000000000405422600002442864502355275231283715010723000000362818700000110224332313
..............................................................................................................................................................GGCGATTGTCGGTATGGTCGC.......................................................................................................................................................................................................................................................211676.00676100240000000000000000000000000000001003000017127105493325512846161911120001630000035112001001016141215
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................221635.0063510060000000000000000000000000000000001000000403544442271287018181616000229000004820000000152526913
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG..........................................................................................................................................................................221558.0055847050000000000000000000000000000000000000023425595023513563312246240006330000000101000013230
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................231533.0053300013900000000000000000000000000000000000000127233340163022423721291700026260000000200000000200
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................231409.0040906025700000000000000000000000000000000100000071942931671211000110000010400000030000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................241393.0039300050000000000000000000000000000000010000011516303219532158281729180004400000000200000010021
.........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................241315.0031500070000000000000000000000000000000002000004962182183683064360009000000118000000128763
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAG.........................................................................................................................................................................231151.001510006000000000000000000000000000000000000614899152257217678000250000000200000000100
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201145.00145000120100000001000000010000000000020200000006243394620110009440000003800002075313
.............................................................................................................................................................TGGCGATTGTCGGTATGGTCGC.......................................................................................................................................................................................................................................................221141.00141000400000000000000000000000000000000010000018766101661842640001050000011500000021431
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221126.001261013100000000000000000000000000000000100000076624163123200031200000102000001171534
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTC..............................................................................................................................................................................181110.00110000300000000000000000000000000000000000001116811931241341640001200000000200000000000
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................241105.001050001300000000000000000000000000001000000000078443123133752000740000010100000020311
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA.........................................................................................................................................................................23187.008700040000000000000000000000000000000110000019373413331164000100000000600000134710
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA.........................................................................................................................................................................23170.007000017000000000000000000000000000010013000000332333231020000290000010300000024110
..........................................................................................................................................................................................................................................TGACTAGACCGAACACT...............................................................................................................................................................................17167.0067000000000000000000000000000000000000000000131100212002001000000001121000000201153
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................21154.005400022000000000100000000000000000000001000000011015132111000660000001000000000000
..............................................................................................................................................................GGCGATTGTCGGTATGGTCG........................................................................................................................................................................................................................................................20153.005300010000000001000000000000000000000000000000000000000000000600000318000000306123
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG.........................................................................................................................................................................23145.00450001000000000000000000000000000000001000010111445352223000010000000300000011300
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT..........................................................................................................................................................................22142.00420003000000000000000000000000000000000000001116046252020000330000000100000001010
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................25136.00360006000000000000000000000000000000058400000110202011000000032000000000000000000
..............................................................................................................................................................GGCGATTGTCGGTATGGTCGCC......................................................................................................................................................................................................................................................22135.003500033000000000000000000000000000000000000000100000000000000000000000100000000000
.............................................................................................................................................................TGGCGATTGTCGGTATGGTCGCT......................................................................................................................................................................................................................................................23131.00310001000000000000000000000000000000101500001111011000000000000000040400000012132
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTGT........................................................................................................................................................................24128.00280002000000000000000000000000000000000000000120141040421000220000000000000000101
.........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGC..........................................................................................................................................................................23128.00280007000000000000000000000000000000000000000040001000000000000000003500000031112
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20126.00260002000000000000000000000000000000000000000220036041002100120000000000000000000
droMoj3
CATT-TC----------------------------------------------------------------CAGTGTTCGAAAATTA----------------------------------------------------TAAAATTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA----CATA---------TACA----CCAAACATTCTAT---ATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCAA----------T-------------------TAT--------AAA-ATT-TCTAGTGCATGGTTCA------AACTTAAAAAGAAAACA-AA---------------------ATCTATAT---CG-----------TATAGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................2311201864.00120186419135541225106626611
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC.........................................................................................................................................................................231229220.002292200225002289950
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................221172966.00172966913735201592200
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................24124007.00240070144610225591
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................22110104.0010104026050074990
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC........................................................................................................................................................................2416588.00658812340063521
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2114274.00427427120035600
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC.........................................................................................................................................................................2313832.003832020038300
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA........................................................................................................................................................................2413555.00355513610031930
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG.........................................................................................................................................................................2311832.0018320840017480
..............................................................................................................................................................GGCGATTGTCGGTATGGTCTCT......................................................................................................................................................................................................................................................2211086.0010860100010760
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................2311020.001020075009450
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT.........................................................................................................................................................................221930.00930358008690
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA..........................................................................................................................................................................221776.00776027017480
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC.........................................................................................................................................................................231494.0049409004850
..............................................................................................................................................................GGCGATTGTCGGTATGGTCTCC......................................................................................................................................................................................................................................................221382.0038200003820
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCG.............................................................................................................................................................................191325.0032507003180
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTTC.......................................................................................................................................................................251277.00277010002670
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.......................................................................................................................................................................251241.00241072001690
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................201237.00237296001390
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC.........................................................................................................................................................................221217.0021700002170
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT..........................................................................................................................................................................221170.0017001001690
..............................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT.........................................................................................................................................................................191159.00159047001120
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG........................................................................................................................................................................241136.00136014001220
............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT.........................................................................................................................................................................211136.00136013001230
..............................................................................................................................................................GGCGATTGTCGGTATGGTCTC.......................................................................................................................................................................................................................................................211118.0011804001140
...........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC..........................................................................................................................................................................211116.0011608001080
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTCC.......................................................................................................................................................................251103.001030500980
.............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT.........................................................................................................................................................................20198.009801100870
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT........................................................................................................................................................................24180.00800700730
droGri2
AAAG-AA------AAG--AATATAAA----------------A-----------------------------------------TGGTGAATTTTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTGCAGTCAAACCCAGCCAGTATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAAC-----CTAAACTCT---ATAT----ACAATA----TAT---ATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA-------TCAGTTTTG----------------GT--------TAA-ATG-AAAAATGA--------------TAAA------------T---------CG-------------ATCTATAT---TT-----------TATAGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT.........................................................................................................................................................................23219.0038533
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC..........................................................................................................................................................................2221.50321
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG...........................................................................................................................................................................2121.00220
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA.........................................................................................................................................................................2320.50101
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT..........................................................................................................................................................................2220.50110
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT........................................................................................................................................................................2420.50101
..........................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT............................................................................................................................................................................2020.50101

Generated: 10/20/2015 at 10:26 PM