ID:

dsi-mir-2582b

 Coordinate:

x:3953638-3953716 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.9 -30.6 -30.6

Sense Strand Reads

AAGAAAAATTGTGCAATTTTTTACAAATATTAAGAATATTACAAATTATTACCATTCATATCCTGGAGAGTGTTCTTAATAGTCTGTTATTATTACACAAACTTTGGGAATACTTTCGAGATATGATGGCATAACGCTGCAAAAATAAGTATAAACATATCCCTATCCATCATCAAATC

************************************************...((((.(((((.((.((((((((((((((.(((.(((((....)).))).))))))))))))))))).)))))))))))......******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009

testis

 O001

Testis

 SRR618934

dsim w501 ovaries

 SRR553486

Makindu_3 day-old ovaries

 SRR553487

NRT_0-2 hours eggs

 SRR553485

Chicharo_3 day-old ovaries

 SRR553488

RT_0-2 hours eggs

 O002

Head

 GSM343915

embryo

 M024

male body		 M053

female body

 SRR902008

ovaries

 M025

embryo
..................................................................................................AAACTTTGGGAATACTTTCGAG........................................................... 22 0 1 1810.00 1810 340 424 858 49 42 41 31 6 12 2 4 1 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGT............................................................................................ 24 2 1 732.00 732 726 0 0 0 0 0 4 0 0 0 0 2 0
...............................................................TGGAGAGTGTTCCTAATTGTCTG............................................................................................. 23 2 1 703.00 703 699 0 0 1 0 0 2 0 0 0 0 1 0
..................................................................................................AAACTTTGGGAATACTTTCGA............................................................ 21 0 1 549.00 549 213 167 121 19 10 7 8 3 0 0 1 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTG............................................................................................. 23 0 1 327.00 327 0 234 77 0 6 1 0 2 0 6 1 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCT.............................................................................................. 22 0 1 232.00 232 0 155 66 0 0 0 0 2 8 0 1 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGT............................................................................................ 24 0 1 223.00 223 0 143 65 0 3 5 2 3 0 1 1 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCT.............................................................................................. 22 2 1 192.00 192 187 0 0 2 0 0 1 0 0 0 0 2 0
..................................................................................................AAACTTTGGGAATACTTTC.............................................................. 19 0 1 159.00 159 0 140 19 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATA.................................................................................................. 18 0 1 159.00 159 0 143 15 0 0 0 0 1 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAG................................................................................................. 19 0 1 155.00 155 0 150 1 0 0 0 0 4 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGA.......................................................... 22 0 1 152.00 152 11 36 83 4 4 8 4 0 0 0 2 0 0
..................................................................................................AAACTTTGGGAATACTTTCG............................................................. 20 0 1 140.00 140 47 60 29 1 0 0 0 3 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAG........................................................... 21 0 1 128.00 128 44 47 32 3 2 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGA............................................................................................ 24 3 1 101.00 101 101 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTC............................................................................................... 21 0 1 101.00 101 0 93 6 0 0 0 0 2 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTT........................................................................................... 25 2 1 93.00 93 93 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTT............................................................... 18 0 1 73.00 73 0 63 8 0 0 0 0 2 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTA........................................................................................... 25 3 1 69.00 69 69 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGA.......................................................... 23 0 1 66.00 66 15 16 25 0 4 1 0 0 1 3 0 0 1
...............................................................TGGAGAGTGTTCTTAATAGT................................................................................................ 20 0 1 50.00 50 0 42 7 0 0 0 0 1 0 0 0 0 0
.......................................................................................................TTGGGAATACTTTCGAG........................................................... 17 0 1 31.00 31 0 0 31 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACT................................................................. 16 0 1 31.00 31 0 0 31 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTTT.......................................................................................... 26 3 1 27.00 27 27 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTAA.......................................................................................... 26 3 1 26.00 26 26 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGA............................................................ 20 0 1 26.00 26 5 14 5 1 1 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTC.............................................................. 18 0 1 20.00 20 0 13 5 0 0 0 0 2 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGAAA........................................................ 24 1 1 17.00 17 1 0 15 0 0 0 0 0 0 0 1 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGAA......................................................... 23 1 1 14.00 14 3 0 9 0 1 0 0 0 0 1 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGT.......................................................... 23 1 1 14.00 14 11 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGTAA.......................................................................................... 26 1 1 13.00 13 0 0 4 1 4 3 1 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTT................................................................ 17 0 1 13.00 13 0 0 13 0 0 0 0 0 0 0 0 0 0
......................................................................................................TTTGGGAATACTTTCGAG........................................................... 18 0 1 12.00 12 0 0 12 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCG............................................................. 19 0 1 12.00 12 0 9 2 0 0 0 0 1 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAA........................................................... 22 1 1 11.00 11 2 0 8 1 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTC............................................................................................... 21 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAT........................................................... 22 1 1 10.00 10 4 0 6 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAAA.......................................................... 23 1 1 8.00 8 4 0 4 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGTAAA......................................................................................... 27 2 1 8.00 8 0 0 2 0 4 0 1 0 0 0 1 0 0
.......................................................................GTTCTTAATAGTCTGT............................................................................................ 16 0 1 8.00 8 0 0 8 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGAA......................................................... 24 1 1 7.00 7 2 0 5 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGT.......................................................... 22 1 1 7.00 7 2 0 4 0 0 0 0 0 0 0 0 1 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTTA.......................................................................................... 26 2 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGTT........................................................................................... 25 0 1 6.00 6 0 2 2 0 0 2 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGAT........................................................................................... 25 3 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GGAGAGTGTTCTTAATAGTCTG............................................................................................. 22 0 1 6.00 6 0 6 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GTGTTCTTAATAGTCTG............................................................................................. 17 0 1 6.00 6 0 0 6 0 0 0 0 0 0 0 0 0 0
.................................................................................................CAAACTTTGGGAATACTTTCGAG........................................................... 23 0 1 5.00 5 4 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAGTACTTTCGAG........................................................... 22 1 1 5.00 5 0 0 5 0 0 0 0 0 0 0 0 0 0
................................................................GGAGAGTGTTCCTAATTGTCTG............................................................................................. 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTGGAGAGTGTTCCTAATTGTCTG............................................................................................. 24 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGAAAA....................................................... 25 2 1 5.00 5 4 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................GTGTTCTTAATAGTCTGT............................................................................................ 18 0 1 5.00 5 0 0 5 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTA..................................................................................................... 15 0 2 4.50 9 0 0 9 0 0 0 0 0 0 0 0 0 0
..................................................................................................AGACTTTGGGAATACTTTCGAG........................................................... 22 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGGGAATACTTTCGAG........................................................... 16 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0
................................................................GGAGAGTGTTCCTAATTGTCTGT............................................................................................ 23 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCA.............................................................................................. 22 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGAGAATACTTTCGAG........................................................... 22 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................GAGTGTTCTTAATAGTCTG............................................................................................. 19 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATAC.................................................................. 15 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAAAA......................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGGGAATACTTTCGAGA.......................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACCTTGGGAATACTTTCGAG........................................................... 22 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTCCGAG........................................................... 22 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GGGAATACTTTCGAGA.......................................................... 16 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGAAA........................................................ 25 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGAGTTCCTAATTGTCTG............................................................................................. 23 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGAT......................................................... 23 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAAT................................................................................................... 17 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTTAA......................................................................................... 27 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGAGTTCCTAATTGTCTGT............................................................................................ 24 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGGG........................................................... 22 1 1 3.00 3 1 0 1 1 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTA............................................................................................. 23 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ACACTTTGGGAATACTTTCGAG........................................................... 22 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................GAACTTTGGGAATACTTTCGAG........................................................... 22 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTT............................................................................................. 23 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ACTTTGGGAATACTTTCGAG........................................................... 20 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0
................................................................GGAGAGTGTTCCTAATTGTCT.............................................................................................. 21 2 2 2.50 5 5 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGC.......................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTG........................................................................................... 25 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CAAACTTTGGGAATACTTTCGA............................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTTAT......................................................................................... 27 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................ATGGAGAGTGTTCCTAATTGTCTGT............................................................................................ 25 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCTAG........................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGG.......................................................... 22 1 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGGT........................................................................................... 25 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGGGAATACTTTCGAGATATGATGGCA................................................ 28 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..............................................................ATGGAGAGTGTTCCTAATTGTCTG............................................................................................. 24 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGG.......................................................... 23 1 1 2.00 2 0 0 1 0 0 0 0 0 0 1 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGATA.......................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGT............................................................ 21 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAATTTTGGGAATACTTTCGAG........................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGA............................................................................................ 24 1 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0
......................................................................TGTTCTTAATAGTCTGT............................................................................................ 17 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................AAACTTGGGAATACTTTCGAG........................................................... 21 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AGACTTTGGGAATACTTTCGA............................................................ 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................TTTGGGAATACTTTCGAGAAAC....................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGAAATACTTTCGAG........................................................... 22 1 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0 0
...............................................................TGGAGAGAGTTCCTAATTGTCTGTT........................................................................................... 25 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGATA........................................................ 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................AGTGTTCTTAATAGTCTGT............................................................................................ 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGAGTTCCTAATTGTCT.............................................................................................. 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGCGTTCCTAATTGTCTGT............................................................................................ 24 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TTTGGGAATACTTTCGAGA.......................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................GTGTTCTTAATAGTCT.............................................................................................. 16 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACT................................................................. 15 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGTA........................................................................................... 25 1 1 2.00 2 0 0 1 0 0 0 0 0 0 0 1 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCA.............................................................................................. 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................TAACTTTGGGAATACTTTCGA............................................................ 21 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCTA............................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGG............................................................................................ 24 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATATTTTCGAG........................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGCGAATACTTTCGAG........................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................CAAACTTTGGGAATACTTTCG............................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GTTCTTAATAGTCTG............................................................................................. 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGTAAAA........................................................................................ 28 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................AACTTTTGGAATACTTTCGAG........................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGGATACTTTCGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGGAAA....................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGTG........................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGC............................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCATAATTGTCT.............................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCTAGAAATT...................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGGGTTCCTAATTGTCTGT............................................................................................ 24 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTC........................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCAA............................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATAGTCTG............................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCAAATTGTCTGTT........................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTTTTCCTAATTGTCTGT............................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGATCTTAATAGTCTGT............................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGTTAAA........................................................................................ 28 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAC........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCTAGT.......................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGAGAGTGTTCCTAATTGTCTG............................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGGGAATACTTTCG............................................................. 15 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACCTTGGGAATACTTTCGAG........................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAGCTTTGGGAATACTTTCGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGGGAATACTTTCGAGA.......................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AACCTTTGGGAATACTTTCGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TAGAGAGTGTTCTTAATAGTCTGT............................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................GGAGAGTGTTCCTAATTGTCTGTT........................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GTGTTCTTAATAGTCTGTAA.......................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AGCTTTGGGAATACTTTCGAGA.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TCCCAAAACTTTGGGAATACTTTCGAG........................................................... 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGGGAGTGTTCCTAATTGTCTGT............................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGAGTGTTCTTAATAGTCTGT............................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................GAGTGTTCTTAATAGTCT.............................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................GGCTTGGAGAGTGTTCTTAATAGTCTGT............................................................................................ 28 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................GGAGAGTGTTCCTAATTGTCTGTA........................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAACAGTCTG............................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTAGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGAAGAGTGTTCCTAATTGTCTG............................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGGGTTCCTAATTGTCTGTT........................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAA.................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................AGTGTTCTTAATAGTCTG............................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................TTGGAGAGTGTTCCTAATTGTCTGT............................................................................................ 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAATTTTGGGAATACTTTCGAAA.......................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATACTTTGGGAATACTTTCGA............................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGATA.......................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGTTG.......................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATAATTTCGA............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ATTTGGGAATACTTTCGAG........................................................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTGATAT......................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTCTCGAGA.......................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGTTA.......................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGGA......................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................TACTTTGGGAATACTTTCGAGA.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTCTGGGAATACTTTCGA............................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGTGGATACTTTCGAG........................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATGCTTTCGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTCTGGGAATACTTTCGAG........................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACCTTGGGAATACTTTCGAGA.......................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGC............................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATACTTTGGGAATACTTTCGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTA............................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAGTAGTCT.............................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TAGAGAGTGTTCCTAATTGTCTGT............................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACCTTCGAGA.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................TAACTTTGGGAATACTTTCGAG........................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................AACTTTGAGAATACTTTCG............................................................. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................GAGAGTGTTCCTAATTGTCTGT............................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGT................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................AGTGTTCTTAATAGTCT.............................................................................................. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGGTC........................................................ 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGTT......................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTACGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGGGTT....................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTACTAGTCT.............................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTCTTT............................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATATTTTCGA............................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGGGA.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGACAGTGTTCTTAATAGTCT.............................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACCTTCGAG........................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAGATA........................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGGG......................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGGGAATACTTTCGA............................................................ 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................GAGTGTTCTTAATAGTCTGT............................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................CGGAGAGTGTTCTTAATA.................................................................................................. 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGTG............................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGTT........................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTTC............................................................................................ 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGGGT........................................................ 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TAGAGAGTGTTCCTAATTGTCTG............................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCTAGT.......................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................GGAGAGCGTTCCTAATTGTCTGT............................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTTTCTG............................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TTTGGGAATACTTTCGA............................................................ 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATATTTTCGAG........................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCA............................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTGAAA.......................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCTTAATAGTCTAA............................................................................................ 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................CTGGAGAGTGTTCTTAATAG................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................TAGAGAGTGTTCCTAATTGTCT.............................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGAGAGTGTTCTTAATAGTCTGG............................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................AATCTTTGGGAATACTTTGGAG........................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGCAATACTTTCGAGA.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGTGTTCCTAATTGCCTG............................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GGAGAGTGTTCTTAATAGTCT.............................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGGATACTTTCGAGA.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTCGAGTTT........................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTT............................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGGAATACTTTCGAAA.......................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAACACTTTCAA............................................................ 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGAGAGGGTTCCTAATTGTCTG............................................................................................. 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................GTTCTTAATAGTCTGTAA.......................................................................................... 18 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACTTTGGAAATACTTTC.............................................................. 18 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................ATGGAGAGTGTTCCTAATTGT................................................................................................ 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACG................................................................. 16 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGGGAATACTTTCGAA........................................................... 17 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................AGCCTCGAGAGTGTTCT....................................................................................................... 17 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................AAACTTTGGAATACTTTCGAG........................................................... 21 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GGGAATACTTTCGAAA.......................................................... 16 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACTTTGGGAATACTTTGAG............................................................ 21 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TGGGGAGTGTTCTTA..................................................................................................... 15 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGGGAATACTTTCGC............................................................ 16 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTCTTTTTAACACGTTAAAAAATGTTTATAATTCTTATAATGTTTAATAATGGTAAGTATAGGACCTCTCACAAGAATTATCAGACAATAATAATGTGTTTGAAACCCTTATGAAAGCTCTATACTACCGTATTGCGACGTTTTTATTCATATTTGTATAGGGATAGGTAGTAGTTTAG

********************************************...((((.(((((.((.((((((((((((((.(((.(((((....)).))).))))))))))))))))).)))))))))))......************************************************ 		Read size # Mismatch Hit Count Total Norm Total O002

Head

 SRR553487

NRT_0-2 hours eggs

 SRR618934

dsim w501 ovaries
.............................................................................................................TATGAAAGCTCTATACTACCG................................................. 21 0 1 1.00 1 1 0 0
.....................ATGGCTATCATTCTTATAAT.......................................................................................................................................... 20 3 15 0.07 1 0 1 0
.............................................................................................................................................................ATAGGGATAGTTAGTAAT.... 18 2 16 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 x:3953588-3953766 - dsi-mir-2582b Known_mirbase AAGAAAAATTGTGCAATTTTTT---A---------C-------AAATAT----TAAGAATATTAC---------------------------------AAATTAT--TACCATTCATATCCTGGAGAGTG-TTCTTAATAGTCTGTTATTATTACA-CAAACTTTGGGAATAC--TTTCGAGAT-ATGATGGCATAAC--------GCTGCAAAAATA-AGTATAAACAT----ATC-------------CCTATCCATCATCAAATC
droSec2 scaffold_4:2465097-2465276 + dse_38 confident AAGAAAAATTGTGAAATTTTTT---A---------C-------AAATAT----TAAGAATATTAC---------------------------------AAATTAT--TACCATTCATATCCTGGACAGTG-TTCCTAATAGTCTGTTATTATTACA-CAAACCTTGGGAATAC--TTTCGAGATAAGGATGGCATAAC--------GCTGCAAAAATA-AGTATAAACAT----ATC-------------CCTATCCATCATCAAATC
dm3 chrX:4259656-4259835 - AAGAAAAATTGTGCTATTTTTTCTGA---------C-------AAAT-------------ATTAC---------------------------------GAATGAT--TACCATTCATATCCTTGGAACAA-TTCCTAATAGAATGTTATTATTACAACAATCTTTAGCAAGAC--TTTCGAGATAAGGATGGCATAAC--------GCTGCAAAAAAAAAATATAAAAATTTACATA-------------CTTATCAATCATCTAATC
droEre2 scaffold_4690:1630440-1630551 - ATCGAAATT-TAGCAATTTATG---AAGTTAA---------------------------------------------------------------------------AAAAATATAAAGCCATGCTAGTG-----------------------------------------------------------------------------CAACAAAAAGAGTTTATGAATATCAAAATGACCTAGTGTATTGATTTTAAATAAATCAATC
droYak3 X:4178633-4178819 + dya_77 confident AAAATAAAGTTTATAAATATTT---A---------T------TAAAT-------AGTGATGTTTCACATCCAAACACAGAC---------------GGAAATGATTTGACCATTCATGTACTTGGAAGTA-TTCCTAATAGATTGTTTTTTATACACCAGTCTTTAGGACTGC--TTCCAAGAATAAGATTGCATAACTGCATAATCCTGCAAAAAAA--ATTCAAATAT----AT--------------------------------
droRho1 scf7180000779334:418623-418825 + AAAAATGGATATATG----------AAATTAAATCCATCCAATAAAA--ATACAAGTGGCGCTCTTCATT-A--T----ACGACTTTTTATCAATAAAATATGAAAAAATCATGCATGTTTTTTGGGGTGATATGCATTAGATTGCTTTTA-TATATCAATCTTTTGC-TTATTCTCCTAAAAACAAGATTGTATTACT-------TCTGCAATAATG-CATATA------------------------------------TGAAATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGAAAAATTGTGCAATTTTTT---A---------C-------AAATAT----TAAGAATATTAC---------------------------------AAATTAT--TACCATTCATATCCTGGAGAGTG-TTCTTAATAGTCTGTTATTATTACA-CAAACTTTGGGAATAC--TTTCGAGAT-ATGATGGCATAAC--------GCTGCAAAAATA-AGTATAAACAT----ATC-------------CCTATCCATCATCAAATCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAG......................................................................................2211810.0018100204424641494231858121340000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGA.......................................................................................211549.005490001167371910812100213000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTG...........................................................................................................................231327.0032706012342106077000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCT............................................................................................................................221232.0023200011552000066800000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTGT..........................................................................................................................241223.0022301011433503265000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTC.........................................................................................191159.0015900001400000019000000
.........................................................................................................................TGGAGAGTG-TTCTTAATA................................................................................................................................181159.0015900001431000015000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAG...............................................................................................................................191155.001550000150400001000000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAGA.....................................................................................221152.0015200023608444830011000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCG........................................................................................201140.0014000006030100290047000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAG......................................................................................211128.0012800004700320320044000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTC.............................................................................................................................211101.00101000093200006000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTT..........................................................................................18173.0073000063200008000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGA.....................................................................................23166.006603101601040251015000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGT..............................................................................................................................20150.0050000042100007000000
...................................................................................................................................................................TTGGGAATAC--TTTCGAG......................................................................................17131.0031000000000031000000
..............................................................................................................................................................AAACTTTGGGAATAC--T............................................................................................16131.0031000000000031000000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGA.......................................................................................20126.0026000014001105005000
...............................................................................................................................................................AACTTTGGGAATAC--TTTC.........................................................................................18120.0020000013200005000000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAGAA-...................................................................................23114.001401000000109003000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGT.....................................................................................23114.0014000000000030011000
..............................................................................................................................................................AAACTTTGGGAATAC--TT...........................................................................................17113.0013000000000013000000
..................................................................................................................................................................TTTGGGAATAC--TTTCGAG......................................................................................18112.0012000000000012000000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCG........................................................................................19112.001200009100002000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAA......................................................................................22111.001100000001008002000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAT......................................................................................22110.001000000000006004000
.................................................................................................................................G-TTCTTAATAGTCTGT..........................................................................................................................1618.00800000000008000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGAA-...................................................................................2417.00700000000005002000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAGT.....................................................................................2217.00700000000004012000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTGTT.........................................................................................................................2516.00600002020002000000
..........................................................................................................................GGAGAGTG-TTCTTAATAGTCTG...........................................................................................................................2216.00600006000000000000
...............................................................................................................................GTG-TTCTTAATAGTCTG...........................................................................................................................1716.00600000000006000000
.............................................................................................................................................................CAAACTTTGGGAATAC--TTTCGAG......................................................................................2315.00500000000001004000
...............................................................................................................................GTG-TTCTTAATAGTCTGT..........................................................................................................................1815.00500000000005000000
.........................................................................................................................TGGAGAGTG-TTCTTA...................................................................................................................................1524.50900000000009000000
....................................................................................................................................................................TGGGAATAC--TTTCGAG......................................................................................1614.00400000000004000000
.............................................................................................................................GAGTG-TTCTTAATAGTCTG...........................................................................................................................1913.00300000000003000000
..............................................................................................................................................................AAACTTTGGGAATAC--.............................................................................................1513.00300000000003000000
...................................................................................................................................................................TTGGGAATAC--TTTCGAGA.....................................................................................1813.00300000000003000000
.....................................................................................................................................................................GGGAATAC--TTTCGAGA.....................................................................................1613.00300000000003000000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAGAT-...................................................................................2313.00300002000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAAT.................................................................................................................................1713.00300000000003000000
................................................................................................................................................................ACTTTGGGAATAC--TTTCGAG......................................................................................2013.00300000000001002000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAGC.....................................................................................2212.00200000000001001000
.............................................................................................................................................................CAAACTTTGGGAATAC--TTTCGA.......................................................................................2212.00200000000000002000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAGG.....................................................................................2212.00202000000000000000
...................................................................................................................................................................TTGGGAATAC--TTTCGAGAT-ATGATGGCA..........................................................................2812.00200000020000000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGG.....................................................................................2312.00201000000001000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGT.......................................................................................2112.00200000000001001000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTGA..........................................................................................................................2412.00200000000001100000
................................................................................................................................TG-TTCTTAATAGTCTGT..........................................................................................................................1712.00200000000002000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGAT-A..................................................................................2512.00200002000000000000
..............................................................................................................................AGTG-TTCTTAATAGTCTGT..........................................................................................................................1912.00200000000002000000
..................................................................................................................................................................TTTGGGAATAC--TTTCGAGA.....................................................................................1912.00200000000002000000
...............................................................................................................................GTG-TTCTTAATAGTCT............................................................................................................................1612.00200000000002000000
...............................................................................................................................................................AACTTTGGGAATAC--T............................................................................................1512.00200000000002000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTGTA.........................................................................................................................2512.00200010000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCA............................................................................................................................2212.00200000000002000000
.............................................................................................................................................................CAAACTTTGGGAATAC--TTTCG........................................................................................2111.00100000000000001000
.................................................................................................................................G-TTCTTAATAGTCTG...........................................................................................................................1511.00100000000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTGC..........................................................................................................................2411.00100000000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTGTTAAA......................................................................................................................2811.00100000000100000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAC......................................................................................2211.00100000000001000000
...................................................................................................................................................................TTGGGAATAC--TTTCG........................................................................................1521.00200000000002000000
....................................................................................................................................................................TGGGAATAC--TTTCGAGA.....................................................................................1711.00100000000001000000
............................................................................................................................AGAGTG-TTCTTAATAGTCTGT..........................................................................................................................2111.00100000000001000000
.............................................................................................................................GAGTG-TTCTTAATAGTCT............................................................................................................................1811.00100000000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAA..................................................................................................................................1611.00100000000001000000
..............................................................................................................................AGTG-TTCTTAATAGTCTG...........................................................................................................................1811.00100000000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTGTTA........................................................................................................................2611.00100001000000000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGGA-...................................................................................2411.00100000000001000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGC.......................................................................................2111.00100000000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTA...........................................................................................................................2311.00100000000001000000
..............................................................................................................................AGTG-TTCTTAATAGTCT............................................................................................................................1711.00100000000001000000
...............................................................................................................................................................AACTTTGGGAATAC--TTTCGAGAT-A..................................................................................2411.00100001000000000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGGG-...................................................................................2411.00100000000001000000
...................................................................................................................................................................TTGGGAATAC--TTTCGA.......................................................................................1611.00100000000001000000
.............................................................................................................................GAGTG-TTCTTAATAGTCTGT..........................................................................................................................2011.00100001000000000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGTT......................................................................................2211.00100000000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTTC..........................................................................................................................2411.00100000000001000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCGAGGG-T..................................................................................2511.00100000000001000000
..................................................................................................................................................................TTTGGGAATAC--TTTCGA.......................................................................................1711.00100000000001000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTCA........................................................................................2011.00100000000001000000
.........................................................................................................................TGGAGAGTG-TTCTTAATAGTCTAA..........................................................................................................................2411.00100000000100000000
........................................................................................................................CTGGAGAGTG-TTCTTAATAG...............................................................................................................................2011.00100001000000000000
..........................................................................................................................GGAGAGTG-TTCTTAATAGTCT............................................................................................................................2111.00100001000000000000
...............................................................................................................................................................AACTTTGGGAATAC--TTT..........................................................................................1711.00100000000001000000
..............................................................................................................................................................AAACTTTGGGAATAC--G............................................................................................1640.25100000000001000000
...................................................................................................................................................................TTGGGAATAC--TTTCGAA......................................................................................1750.20100000000001000000
..............................................................................................................................................................AAACTTTGGGAATAC--TTTGAG.......................................................................................2170.14100000000001000000
...................................................................................................................................................................TTGGGAATAC--TTTCGC.......................................................................................16110.09100000000001000000
droSec2
AAGAAAAATTGTGAAATTTTTT---A---------C-------AAATAT----TAAGAATATTAC---------------------------------AAATTAT--TACCATTCATATCCTGGACAGTG-TTCCTAATAGTCTGTTATTATTACA-CAAACCTTGGGAATAC--TTTCGAGATAAGGATGGCATAAC--------GCTGCAAAAATA-AGTATAAACAT----ATC-------------CCTATCCATCATCAAATCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGAG......................................................................................222448.00896287695841
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAG......................................................................................212182.003641342417
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGA.......................................................................................21280.00160114487
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAGT.....................................................................................22250.0010018955
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCG........................................................................................20228.005605123
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAGA.....................................................................................22226.505304823
.........................................................................................................................TGGACAGTG-TTCCTAATAGTCTGT..........................................................................................................................24221.00427131210
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGA.......................................................................................20213.502712501
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGAGA.....................................................................................23210.502101722
.........................................................................................................................TGGACAGTG-TTCCTAATAGTCTG...........................................................................................................................2324.0086011
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGAGT.....................................................................................2323.0060600
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAGC.....................................................................................2223.0060600
................................................................................................................................................................ACCTTGGGAATAC--TTTCGAG......................................................................................2022.0040400
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGAGTAT...................................................................................2521.5030300
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAGTAT...................................................................................2421.5030300
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGAT......................................................................................2221.0020200
.........................................................................................................................TGGACAGTG-TTCCTAATAGTCT............................................................................................................................2221.0020101
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAA......................................................................................2121.0020200
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGAGTA....................................................................................2420.5010100
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAT......................................................................................2120.5010100
.........................................................................................................................TGGACAGTG-TTCCTAATAGTC.............................................................................................................................2120.5010100
................................................................................................................................................................ACCTTGGGAATAC--TTTCGAGT.....................................................................................2120.5010100
..................................................................................................................................................................CTTGGGAATAC--TTTCGAGA.....................................................................................1920.5010100
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGATT.....................................................................................2220.5010100
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGT.......................................................................................2020.5010100
.........................................................................................................................TGGACAGTG-TTCCTAATAGTCTGTTT........................................................................................................................2620.5010100
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAGTC....................................................................................2320.5010100
...............................................................................................................................................................AACCTTGGGAATAC--TTTCGAGAT....................................................................................2320.5010100
..........................................................................................................................GGACAGTG-TTCCTAATAGTCTGT..........................................................................................................................2320.5011000
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGACT.....................................................................................2320.5010100
.........................................................................................................................TGGACAGTG-TTCCTAATAGTCTGTC.........................................................................................................................2520.5010100
.........................................................................................................................TGGACAGTG-TTCCTAATAGTCTGTTAAA......................................................................................................................2820.5010100
.........................................................................................................................TGGACAGTG-TTCCTAATAGTCTGTT.........................................................................................................................2520.5010001
..............................................................................................................................................................AAACCTTGGGAATAC--TTTCGAGC.....................................................................................2320.5010100
...............................................................................................................................................................AACCTTGGGAATAC--TTTCG........................................................................................1920.5010100
dm3
AAGAAAAATTGTGCTATTTTTTCTGA---------C-------AAAT-------------ATTAC---------------------------------GAATGAT--TACCATTCATATCCTTGGAACAA-TTCCTAATAGAATGTTATTATTACAACAATCTTTAGCAAGAC--TTTCGAGATAAGGATGGCATAAC--------GCTGCAAAAAAAAAATATAAAAATTTACATA-------------CTTATCAATCATCTAATCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................................C--TTTCGAGATAAGGATGG............................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TGCAAAAAAAAAATATAAAA........................................2020.501000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTTCTGA---------C-------AAAT-------------ATTAC---------------------------------CC........................................................................................................................................................................2030.331000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TTCGAGATAAGGATC.............................................................................15120.081000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCGAAATT-TAGCAATTTATG---AAGTTAA---------------------------------------------------------------------------AAAAATATAAAGCCATGCTAGTG-----------------------------------------------------------------------------CAACAAAAAGAGTTTATGAATATCAAAATGACCTAGTGTATTGATTTTAAATAAATCAATCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads
droYak3
AAAATAAAGTTTATAAATATTT---A---------T------TAAAT-------AGTGATGTTTCACATCCAAACACAGAC---------------GGAAATGATTTGACCATTCATGTACTTGGAAGTA-TTCCTAATAGATTGTTTTTTATACACCAGTCTTTAGGACTGC--TTCCAAGAATAAGATTGCATAACTGCATAATCCTGCAAAAAAA--ATTCAAATAT----AT--------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................................................................................................................TTGGAAGTA-TTCCTAATAGATTG...........................................................................................................................23117.0017012201110000
...............................................................................................................................................................GTCTTTAGGACTGC--TTCCAAGA.....................................................................................22110.001002700001000
...............................................................................................................................................................GTCTTTAGGACTGC--TTCCAAG......................................................................................2116.00621120000000
.................................................................................................................................................................CTTTAGGACTGC--TTCCAAGAAT...................................................................................2216.00612200010000
.........................................................................................................................TTGGAAGTA-TTCCTAATAGATTGT..........................................................................................................................2413.00300010020000
.................................................................................................................................................................CTTTAGGACTGC--TTCCAAGAA....................................................................................2113.00300200010000
.........................................................................................................................TTGGAAGTA-TTCCTAATAGATTGA..........................................................................................................................2411.00100010000000
.......................................................................................................................ACTTGGAAGTA-TTCCTAATAG...............................................................................................................................2111.00100000010000
.......................................................................................................................ACTTGGAAGTA-TTCCTAATAGAC.............................................................................................................................2311.00100100000000
..................................................................................................................................................................TTTAGGACTGC--TTCCAAGA.....................................................................................1911.00100100000000
.......................................................................................................................ACTTGGAAGTA-TTCCTAATAGA..............................................................................................................................2211.00100100000000
.................................................................................................................................................................CTTTAGGACTGC--TTCCAAG......................................................................................1911.00101000000000
...............................................................................................................................................................GTCTTTAGGACTGC--TTCCAAGAAA...................................................................................2411.00100010000000
.........................................................................................................................TTGGAAGTA-TTCCTAATAGATT............................................................................................................................2211.00101000000000
.................................................................................................................................................................CTTTAGGACTGC--TTCCAAGAAA...................................................................................2211.00100010000000
.................................................................................................................................................................CTTTAGGACTGC--TTCCAAGA.....................................................................................2011.00101000000000
...............................................................................................................................................................GTCTTTAGGACTGC--TTCCAAGAA....................................................................................2311.00100000010000
.......................................................................................................................ACTTGGAAGTA-TTCCTAATAGAT.............................................................................................................................2311.00100100000000
...............................................................................................................................................................GTCTTTAGGACTGC--TTCCAAGAT....................................................................................2311.00100100000000
droRho1
AAAAATGGATATATG----------AAATTAAATCCATCCAATAAAA--ATACAAGTGGCGCTCTTCATT-A--T----ACGACTTTTTATCAATAAAATATGAAAAAATCATGCATGTTTTTTGGGGTGATATGCATTAGATTGCTTTTA-TATATCAATCTTTTGC-TTATTCTCCTAAAAACAAGATTGTATTACT-------TCTGCAATAATG-CATATA------------------------------------TGAAATTSizeHit CountTotal NormTotal
No Reads

Generated: 10/20/2015 at 06:59 PM