ID:

dsi-mir-1003

 Coordinate:

x:5236415-5236504 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

antisense_to_CDS

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -18.3

Flybase annnotation

Antisense to CDS [x_5232022_5244145_+]; CDS [x_5236485_5236590_-]; utr3 [utr3_plus_6706]; CDS [x_5235870_5236428_-]; utr3 [utr3_plus_6707]; intron [x_5236429_5236484_-]; utr5 [utr5_plus_12030]

No Repeatable elements found

Sense Strand Reads

AGCGGGAACGACTGCAACAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCAAGTGGAAAGCTCTCGGACAGCGATGCC

**********************************************************************((((((((.(((((((((..((((.....)).))..))))))))).))))))))..**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002

Head

 O001

Testis

 SRR553486

Makindu_3 day-old ovaries

 M023

head

 M025

embryo

 SRR553485

Chicharo_3 day-old ovaries

 SRR553487

NRT_0-2 hours eggs

 SRR553488

RT_0-2 hours eggs

 SRR618934

dsim w501 ovaries

 SRR902009

testis

 GSM343915

embryo

 M024

male body		 M053

female body

 SRR902008

ovaries
........................................................................................................TCTCACATTTACATATTCACAG................................................................ 22 0 1 7869.00 7869 2439 1479 418 1186 1090 268 251 376 64 74 42 89 63 30
........................................................................................................TCTCACATTTACATATTCACA................................................................. 21 0 1 2016.00 2016 595 228 342 108 35 200 208 188 31 16 37 3 23 2
........................................................................................................TCTCACATTTACATATTCACAGA............................................................... 23 1 1 1528.00 1528 0 0 563 16 8 470 296 165 1 2 0 4 3 0
........................................................................................................TCTCACATTTACATATTCAC.................................................................. 20 0 1 637.00 637 413 134 12 30 3 17 10 13 1 1 0 1 2 0
........................................................................................................TCTCACATTTACATATTCACAGT............................................................... 23 1 1 519.00 519 0 0 128 17 12 98 101 76 68 6 5 5 2 1
........................................................................................................TCTCACATTTACATATTC.................................................................... 18 0 1 244.00 244 186 57 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCA................................................................... 19 0 1 233.00 233 163 51 5 9 0 0 1 3 0 0 0 0 1 0
......................................................................GTGGGTATCTGGATGTGGTTGG.................................................................................................. 22 0 1 221.00 221 0 1 8 3 10 5 2 0 71 79 28 3 0 11
........................................................................................................TCTCACATTTACATATTCACAA................................................................ 22 1 1 114.00 114 0 0 19 1 1 6 42 39 0 5 0 1 0 0
........................................................................................................TCTCACATTTACATATTCACAGAA.............................................................. 24 2 1 87.00 87 0 0 19 1 0 10 42 14 0 0 0 1 0 0
......................................................................GTGGGTATCTGGATGTGGTTG................................................................................................... 21 0 1 70.00 70 0 1 5 0 0 5 0 1 33 12 7 0 2 4
.........................................................................................................CTCACATTTACATATTCACAG................................................................ 21 0 1 70.00 70 35 21 1 5 0 0 0 0 0 0 1 2 5 0
........................................................................................................TCTCACATTTACATATTCACAC................................................................ 22 1 1 66.00 66 0 0 4 20 24 3 0 6 2 1 0 4 1 1
........................................................................................................TCTCACATTTACATATTCACAGTA.............................................................. 24 2 1 64.00 64 0 0 18 1 4 14 17 10 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGGCGCC........................................................... 27 0 1 25.00 25 15 10 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGG............................................................... 23 0 1 22.00 22 8 1 3 3 4 1 0 0 0 0 0 2 0 0
........................................................................................................TCTCACATTTACATATTCACAGGCG............................................................. 25 0 1 21.00 21 20 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCACATTTACATATTCACAGA............................................................... 22 1 1 18.00 18 0 0 8 1 0 5 0 2 0 0 1 1 0 0
........................................................................................................TCTCACATTTACATATTCACAGAAA............................................................. 25 3 1 15.00 15 0 0 5 0 0 1 5 2 0 2 0 0 0 0
.........................................................................................................CTCACATTTACATATTCACAGT............................................................... 22 1 1 15.00 15 0 0 1 1 1 3 0 2 4 0 3 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGT................................................................................................. 23 1 1 10.00 10 0 0 1 0 0 0 0 0 6 3 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGC............................................................... 23 1 1 10.00 10 0 0 4 3 1 1 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAAA............................................................... 23 2 2 8.50 17 0 0 5 0 0 1 5 5 0 1 0 0 0 0
........................................................................................................CCTCACATTTACATATTCACAG................................................................ 22 1 1 8.00 8 0 0 0 2 2 0 0 2 1 0 0 0 1 0
........................................................................................................TCTCACATCTCTATATTCACAG................................................................ 22 3 1 7.00 7 0 0 0 6 1 0 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTT.................................................................................................... 20 0 1 7.00 7 0 0 0 0 0 2 1 0 3 0 0 0 1 0
......................................................................GTGGGTATCTGGATGTGGTTGGCTC............................................................................................... 25 0 1 7.00 7 0 0 0 0 0 0 0 0 0 0 0 0 0 7
......................................................................GTGGGTATCTGGATGTGGT..................................................................................................... 19 0 1 7.00 7 2 0 0 0 0 0 0 0 5 0 0 0 0 0
.........................................................................................................CTCACATTTACATATTCACA................................................................. 20 0 1 7.00 7 4 2 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................TCTCGCATTTACATATTCACAG................................................................ 22 1 1 6.00 6 0 0 0 2 2 0 1 0 0 0 0 0 1 0
........................................................................................................TCTCACATTTACATATTCACAAAA.............................................................. 24 3 2 6.00 12 0 0 2 0 0 1 7 2 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGC................................................................................................. 23 0 1 6.00 6 1 0 0 1 0 0 0 0 2 1 0 0 0 1
.........................................................................................................CTCACATTTACATATTCAC.................................................................. 19 0 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCATATTTACATATTCACAGA............................................................... 23 2 1 4.00 4 0 0 1 0 0 2 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACG................................................................. 21 1 1 4.00 4 0 0 2 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTTACATTTACATATTCACAG................................................................ 22 1 1 4.00 4 0 0 3 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACGG................................................................ 22 1 1 4.00 4 0 0 0 1 2 0 0 1 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGTAA............................................................. 25 3 1 4.00 4 0 0 0 0 3 1 0 0 0 0 0 0 0 0
........................................................................................................TCCCACATTTACATATTCACAG................................................................ 22 1 1 4.00 4 0 0 0 1 2 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAT................................................................ 22 1 1 3.00 3 0 0 1 0 0 0 0 0 0 0 1 0 1 0
.......................................................................................................CTCTCACATTTACATATTCACAG................................................................ 23 0 1 3.00 3 0 1 0 0 0 0 0 0 1 0 0 0 0 1
......................................................................GTGGGTATCTGGATGTGGTTGGCT................................................................................................ 24 0 1 3.00 3 0 0 0 0 0 0 0 0 1 2 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACACT............................................................... 23 2 1 3.00 3 0 0 1 0 0 2 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCAA.................................................................. 20 1 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGTT.............................................................. 24 2 1 3.00 3 0 0 1 0 0 1 0 0 0 1 0 0 0 0
........................................................................................................TCTCACATTTACATATTTACA................................................................. 21 1 1 3.00 3 0 0 1 0 0 1 0 0 0 0 1 0 0 0
........................................................................................................TCTCACATTTACATATTTACAGA............................................................... 23 2 1 3.00 3 0 0 1 0 0 2 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTAACAG................................................................ 22 1 1 3.00 3 0 0 0 1 1 0 0 0 0 0 0 0 1 0
......................................................................GTGGGTATCTGGATGTGGTTGGTT................................................................................................ 24 1 1 2.00 2 0 0 0 0 0 0 0 0 0 1 0 0 0 1
...........................................................................................GCTCTGGCGGTCCTCTCAC................................................................................ 19 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................GCTCACATTTACATATTCACAG................................................................ 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTTACATTTACATATTCACAGA............................................................... 23 2 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCATAG................................................................ 22 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TGTCACATTTACATATTCACAG................................................................ 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTCACATTTACATATTCACA................................................................. 21 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGGC.............................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTCACATATTCACAG................................................................ 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATAATCACA................................................................. 21 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATA....................................................................... 15 0 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCGCAG................................................................ 22 1 1 2.00 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGGCGC............................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCAAA................................................................. 21 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATACTCACAG................................................................ 22 1 1 2.00 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0
........................................................................................................CTTCACATTTACATATTCACAG................................................................ 22 2 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
..........................................................................................................TCACATTTACATATTCACAGA............................................................... 21 1 1 2.00 2 0 0 0 0 0 1 0 1 0 0 0 0 0 0
........................................................................................................TCTCACATTTATATATTCACAG................................................................ 22 1 1 2.00 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGA.................................................................................................. 22 1 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
........................................................................................................TCGCACATTTACATATTCACAGA............................................................... 23 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................ACATTTACATATTCACAG................................................................ 18 0 1 2.00 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0
.......................................................................................................ATCTCACATTTACATATTCACAG................................................................ 23 1 1 2.00 2 0 0 0 0 0 0 0 0 0 1 0 0 1 0
........................................................................................................TCTCACATTTACATATTCACATA............................................................... 23 2 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................GCTCTGGCGGTCCTCTCACATTT............................................................................ 23 0 1 2.00 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGTA................................................................................................ 24 2 1 2.00 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0
.........................................................................................................CTCACATTTACATATTCACAGAA.............................................................. 23 2 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0
........................................................................................................TCTCACGTTTACATATTCACAG................................................................ 22 1 1 2.00 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................TTTCACATTTACATATTCACAGA............................................................... 23 2 1 2.00 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0
......................................................................GTGGGTATCTGGATGTGG...................................................................................................... 18 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0
........................................................................................................TCTCACATTAACATATTCACA................................................................. 21 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
........................................................................................................TCCCACATTTACATATTCACAGA............................................................... 23 2 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0
.......................................................................TGGGTATCTGGATGTGGTTGG.................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0
........................................................................................................ACTCACATTTACATATTCACAGA............................................................... 23 2 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0
........................................................................................................TCTCAAATTTACATATTCACAGA............................................................... 23 2 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................GCTCTGGCGGTCCTCTCACATTTACAT........................................................................ 27 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2
...........................................................................................................CACATTTACATATTCACAG................................................................ 19 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................GTGGGTGTCTGGATGTGGTTG................................................................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0
........................................................................................................TCTCACATTTACATATTAACAGA............................................................... 23 2 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTGACATATTCACAG................................................................ 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TCACATTTACATATTCACAG................................................................ 20 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................CTCACATTTACATATTCACAGTT.............................................................. 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................CTCTCACATTTACATATTCAC.................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTGCATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACGTTTACATATTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATTTTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................GATCTCTCACATTTACATATT..................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGCT..................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACACATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTTCATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACGTATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................GCGTCTCAAATATGGAACGCCCTCAAGT........................ 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................TCTCACATTTGCATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATTTGGTTGG.................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTAAATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATGTTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................GCTCACATTTACATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTATATATACACAGT............................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATACTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................TTTACATATTCACAG................................................................ 15 0 2 1.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0
........................................................................................................TTTCACATTTACATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................TCACATTTACATATTCACA................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTAACATTTACATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................GGCACTGAAGCTGCGC............................................................................................................................. 16 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................CCTCACATTTACATATTCACAGTA.............................................................. 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAAT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATGTTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................GTCGGTATCTGGATGTGGTTGG.................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTATATATTCACAGA............................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................ACATTTACATATTCACAGT............................................................... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCCCACATTTACATATTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................TCTCACATTTACATATTGACAG................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGTGGAAAGCTCTCGGACAGCGATGCC 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TCCTCTCACATTTACATATTCAC.................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGTCGACA.......................................................... 28 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCGCATTTACATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTAGATATTCACA................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTATATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCAGATTTACATATTCAC.................................................................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................CTCTCACATTTACATATTCACA................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................GCTCTGGCGGTCCTCTCACATTTACATA....................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................TCTCACATCTACATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATAGTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................CCTCACATTTATATATTCACAG................................................................ 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCAG.................................................................. 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTTA................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCTCATTTACATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCATA................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACCTATTCACA................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGATTT............................................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................TCTCACATTTACATATTGACAGA............................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCAGATTTACATATTCACAGA............................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTTGTTGG.................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTGACATATTCACAGA............................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................CTCACATTTACATATTCA................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGCA................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................TGAGATGCGCGAACTGGCACTGAAGC.................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGCTCTG............................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................CATTTACATATTCACAG................................................................ 17 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACGGTA.............................................................. 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................TCTCATATTTACATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................CACATTTACATATTCACAGT............................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TGGGTATCTGGATGTGGTTGGC................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................TACATATTCACAGGCTCC........................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGGA.............................................................. 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTATATATTCACA................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCCCA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACACATTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATAGTCACAGA............................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GCTCTGGCGGTCCTCTCACATTTACA......................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCAAAA................................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TATCACATTTACATATTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................TCTCACATTTACATATCCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................GTGGCTATCTGGATGTGGTTGG.................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................ACTCACATTTACATATTCACAGTA.............................................................. 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGG................................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................TCTCACATTTAAATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................GTGGGGATCTGGATGTGGTTGG.................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................ATTTACATATTCACAG................................................................ 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACAAATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................TCTCACAGTTACATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................AGCTCTCGGACAGCGATGCC 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACTTATTCACAGA............................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCGCACATTTACATATTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................ACTCACATTTACATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACTTATTCACAGT............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................GTATCTGGATGTGGTTG................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCAGAG................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................GCTCACATTTACATATTCACAGA............................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACGA................................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTTCACATTTACATATTCACAG................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................GTGGGTATCCGGATGTGGTTGG.................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATGTTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTC................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................GAGGATGAGATGCGCGAAAGGCCA......................................................................................................................................... 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
AGCGGGAACGACTGCA.............................................................................................................................................................................. 16 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCATATTTACATATTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................TGTCACATTTACATATTCACAGA............................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTCCATATTCACA................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................GGTATCTGGATGTGGTTGG.................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTAACATATTCACAGT............................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CCTCACATTTACATACTCACAG................................................................ 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATAT...................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGGG................................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGTCTG............................................................ 26 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGGTTGGTTT............................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................CTCACATTTACATATTCACAGTA.............................................................. 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACAGTCGGT........................................................... 27 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................GCGCAGAAGGTGGTTTTCCGG............................................................................................................ 21 3 5 0.60 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGTGGAAAGAGCTTGGACAGC...... 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACCTTTACATATTCGCT................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................GTGGGTATCTGGATGTG....................................................................................................... 17 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................ATAGGAGCCGTGAGCTG................................................... 17 2 8 0.50 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0
........................................................................................................TTCCACATTTACATATTCACA................................................................. 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................GTGGGTATCTGGATGTGAT..................................................................................................... 19 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTAAATATTCGCAG................................................................ 22 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCACAGTTACATTTTCACA................................................................. 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................ATATTTACATATTCACAG................................................................ 18 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TGTCAGATTTACATATTCACAC................................................................ 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................TCTCTCATTTACATATTCTCAT................................................................ 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................GTGGGTATCTGGATGTGCTCT................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCTCACATTTACATATTCACACAA.............................................................. 24 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................CCTCGAGTGGAAAGCT................ 16 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TTTCACATTTACATATTCACAAA............................................................... 23 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................TCGGGATAAGGTTGGCTCT.............................................................................................. 19 3 17 0.12 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0
...............................................................................................................................................................CTCAAGTGAAAAGCT................ 15 1 20 0.10 2 0 0 0 0 0 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................AGTGGAACGCTCTGGGA.......... 17 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................CAGGCACTGAAGCTGAACAG........................................................................................................................... 20 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TCTGACGGTCATCTCA................................................................................. 16 2 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................CTGGATGTGGTTGGA................................................................................................. 15 1 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGGCGGTCCTGTCACT............................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GGGTAAGCTCTCGGAC......... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TCGCCCTTGCTGACGTTGTCGTCCTCGCGCTCCTACTCTACGCGCTTGACCGTGACTTCGACGCGTCTTCCACCCATAGACCTACACCAACCGAGACCGCCAGGAGAGTGTAAATGTATAAGTGTCCGCGGCACTCGACGCAGTGTTTATACCTTGCGGGAGTTCACCTTTCGAGAGCCTGTCGCTACGG

****************************************************************((((((((.(((((((((..((((.....)).))..))))))))).))))))))..********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934

dsim w501 ovaries

 M024

male body		 SRR902009

testis

 SRR553488

RT_0-2 hours eggs
........................................................................................................AGAGTGTAAATGTTTAA..................................................................... 17 1 7 2.57 18 18 0 0 0
.........................................................................................................GAGTGTAAATGTATAA..................................................................... 16 0 1 1.00 1 1 0 0 0
..................................................................................................TCCAGGAGAGTTTAAATG.......................................................................... 18 2 4 0.75 3 0 3 0 0
..................................................................................................GCCAGGAGAGTTTAAAGG.......................................................................... 18 2 6 0.67 4 0 4 0 0
........................................................................................................AGAGTGTAAATGTTTA...................................................................... 16 1 15 0.27 4 4 0 0 0
....................................................................................................CCGGGGAGTGTAAATGTTTAA..................................................................... 21 3 4 0.25 1 1 0 0 0
.........................................................................................................GAGTGTAAATGTCTA...................................................................... 15 1 20 0.15 3 3 0 0 0
....................................................................................................GAGAAGAGTGTAAATGTTTAA..................................................................... 21 3 14 0.07 1 0 0 1 0
.........................................................................................................GAGTGTAATTGTTTAAGT................................................................... 18 2 16 0.06 1 1 0 0 0
....................................................................................................TAGGAGAGTTTAAATGT......................................................................... 17 2 20 0.05 1 0 0 0 1
........................................................................................................................................GACCCAGTGATTATGCCT.................................... 18 3 20 0.05 1 1 0 0 0
.......................................................................................................TAGAGTGTAAATGTTTAA..................................................................... 18 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 x:5236365-5236554 - dsi-mir-1003 Known_mirbase AGCGGGAACGACTGCAACAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCAAGTGGAAAGCTCTCGGACAGCGATGCC
droSec2 scaffold_0:20818649-20818838 + dse_60 confident AGCGGGAACGACTGCAGCAGCAGGAGCGCGAGGATGAGATGCGAGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCTCGGACAGCGATGCC
dm3 chr3R:20484257-20484446 + dme-mir-1003 Known_mirbase AGCGTGAACGACTGCAACAGCAGGAACGCGAGGATGAGATGCGCGAACTGGCCCTCAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCTCGGACAGCGATGCC
droEre2 scaffold_4820:7574050-7574239 - der_58 confident AACGGGAACGACTGCAACAGCAGGAGCGCGAGGACGAGATGCGTGAACTGGCCCTGAAACTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTACGGAACGCCCTCGAGTGGAAAGCTCTCGGGCAGCGAGGCG
droYak3 3R:26013153-26013342 - dya_39 confident AGCGGGAACGACTGCAACAGCAGGAGCGCGAGGACGAGATGCGTGAACTGGCTCTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGTCGTGAGCTGCGACACAAATATGGAACGCCCTCGAGTGGAAAGCTCTCGGGCAGCGAGGCG
droEug1 scf7180000409881:208785-208974 + AGCGGGAACGACTGCAACAGCAGGAGCGTGAGGACGAGATGCGTGAGTTGGCTTTGAAGCTGCGCAGGAGGTGGGTATC-TTGATGTGGTTGGCTCCG----------GCTGTCCTCTCACATCTGTATATTCACAGGCGTCGTGAGCTGCGTCACAAGTATGGAACGCCCTCAAGCGGCAAGCTGTCAGGTAGTGAAGCG
droBia1 scf7180000302402:4263726-4263915 + AGCGGGAACGACTGCAGCAGCAGGAACGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGAAGGTGGGTATT-TTGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATCTATATATTCACAGGCGTCGTGAGCTGCGGCACAAATATGGCACGCCCTCCAGCGGCAAGCTCTCGGGCAGCGAGGCG
droTak1 scf7180000415310:656277-656466 - AGCGGGAACGACTTCAGCAGCAGGAGCGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGGAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATCTACATATTCACAGGCGTCGTGAGCTGCGACACAAATACGGAACGCCCTCGAGCGGCAAGCTTTCTGGGAGCGAGGCG
droEle1 scf7180000491194:539678-539870 + AAAGGGAGCGACTGCAGCAGCAGGAACGTGAGGACGAGATGCGCGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTTGGCTCTTC------T-GGGCGTCCTCTCACATCTACATATTCACAGGCGGCGTGAGCTGCGCCACAAGTATGGGACCCCTTCGAGCGGCAAGCTCTCGGGCAGCGAGGCG
droRho1 scf7180000779488:582388-582577 + AACGGGAGCGACTGCAGCAGCAGGAGCGTGAAGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTCGGCTTTA----------GCGGTCCTCTCACATCTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTATGGTACACCCTCGAGTGGAAAGCTGTCGGATAGCGAGGCG
droFic1 scf7180000454106:1827799-1827988 - AGCGGGAACGCCTGCAGCAGCAAGAGCGCGAGGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGAAGGTGAGTATC-TGGATGTGACTGGCTCTT----------GCGGTCCTCTCACATCTAGTTATTCTCAGGCGCCGTGAGCTGCGACACAAATACGGAACGCCATCGAGCGGCAAGCTATCGGGCAGCGAAGCA
droKik1 scf7180000302388:1718861-1719055 - AACGGGAGCGACTGCAGCAACAGGAGCGAGAGGACGAGATGCGGGAGCTGGCGCTGAAACTGCGTCGAAGGTGAGTATTGTGGGTGTGGGTGGCTCTGG------CGGCCAGTCCTCTCACATCACCATATTCACAGGCGTCGCGAGCTACGCCACAAATACGGCACGCCCTCCAGCGGAAAGCTCTCTGGCAGTGAGGCC
droAna3 scaffold_13340:4690277-4690473 - dan_260 confident AGCGGGAGCGTCAGCAGCAGCAGGAGCGGGAAGACGAGATGCGCGAACTGGCGCTCAAGCTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTTAT----TTGGCCGGTCCTCTCACATCTCCATATTCACAGGCGTCGAGAGCTGCGCCACAAGTATGGTACGCCCTCCAGCGGAAAACTTTCTGGAAGTGAGGCG
droBip1 scf7180000396359:499236-499433 + AGCGGGAGCGACAGCAGCAGCAGGAGCGCGAAGACGAGATGCGTGAACTGGCGCTAAAGTTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTAAA---TATGGCCAGTCCTCTCACATCTCCATATTCACAGGCGTCGCGAGCTGCGCCACAAGTATGGCACGCCCTCCAGCGGCAAACTGTCTGGAAGTGAGGCT
dp5 2:1751510-1751702 - dps_246 confident AGCGAGAGCGTCAACAGCAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTTG--------GTCAGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGGCACAAGTACGGCACGCCCTCCAGTGGCAAGCTGTCGGGCAGTGATGGG
droPer2 scaffold_7:1904921-1905113 - dpe_337 confident AGCGAGAGCGTCAACAGCAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTTG--------GTCAGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGACACAAGTACGGCACGCCCTCCAGTGGCAAGCTGTCGGGCAGCGATGGG
droWil2 scf2_1100000004902:9616773-9616966 - dwi_34 confident AACGAGAGCGACAACAGCAACAGGAGCGTGAAGATGAGATGAGAGAATTGGCGCTAAAGTTGCGCCGTAGGTGAGTATC-GGGTTGTGATTGGCTCCTT-----GT-GGTAGTCCTCTCACATCTCTATATTCACAGGCGTCGCGAGCTGCGTCACAAATATGGAACACCCTCTAGTGGTAAATTGTCGGACAGTGAGGGA
droVir3 scaffold_13047:780877-781068 + dvi-mir-1003 Known_mirbase AGAGAGAGCGTCAGTTGCAACAGGAACGCGAGGATGAGATGCGCGAGCTCGCGCTAAAGCTGCGTCGTAGGTGAGTAAT-CAGTTGTGGGTGGCTTTTT--------GAAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGTGAGTTGCGGCACAAATATGGAACGCCGTCCAGCGGCAAACTCTCCGACAGCGATGCG
droMoj3 scaffold_6540:4775613-4775804 + dmo_29 confident AGAGGGAGCGACAACTGCAGCAGGAGCGCGAGGACGAGATGCGCGAGCTGGCGCTCAAGCTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTCTAG--------TGAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGAGAGTTGCGCCACAAGTACGGCACGCCGTCCAGTGGCAAGCTCTCCGACAGCGACGTT
droGri2 scaffold_14906:5529236-5529435 - dgr_13 confident AACGGGAGCGTCAGCTGCAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAATTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTTTTGTTCTTAGGGAAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGCGAATTGCGCCACAAATATGGAACGCCCTCCAGTGGCAAACTCTCCGACAGCGATGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCGGGAACGACTGCAACAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCAAGTGGAAAGCTCTCGGACAGCGATGCCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................TCTCACATTTACATATTCACAG................................................................2217869.0078691186891090631479243926841825137664423074000
...................................................................................................................TCTCACATTTACATATTCACA.................................................................2112016.002016108335232285952003422081883137216000
...................................................................................................................TCTCACATTTACATATTCACAGA...............................................................2311528.00152816483004705632961651002000
...................................................................................................................TCTCACATTTACATATTCAC..................................................................201637.0063730132134413171210131001000
...................................................................................................................TCTCACATTTACATATTCACAGT...............................................................231519.0051917512200981281017668516000
...................................................................................................................TCTCACATTTACATATTC....................................................................181244.0024410005718600000000000
...................................................................................................................TCTCACATTTACATATTCA...................................................................191233.0023390015116305130000000
......................................................................GTGGGTATC-TGGATGTGGTTGG............................................................................................................221221.002213310010582071281179000
...................................................................................................................TCTCACATTTACATATTCACAA................................................................221114.0011411100061942390005000
...................................................................................................................TCTCACATTTACATATTCACAGAA..............................................................24187.0087110000101942140000000
......................................................................GTGGGTATC-TGGATGTGGTTG.............................................................................................................21170.00700002105501337412000
....................................................................................................................CTCACATTTACATATTCACAG................................................................21170.00705205213501000100000
...................................................................................................................TCTCACATTTACATATTCACAC................................................................22166.00662042410034062011000
...................................................................................................................TCTCACATTTACATATTCACAGTA..............................................................24164.0064104000141817100000000
...................................................................................................................TCTCACATTTACATATTCACAGGCGCC...........................................................27125.00250000101500000000000
...................................................................................................................TCTCACATTTACATATTCACAGG...............................................................23122.002232401813000000000
...................................................................................................................TCTCACATTTACATATTCACAGGCG.............................................................25121.0021000012000000000000
....................................................................................................................CTCACATTTACATATTCACAGA...............................................................22118.001811000058020100000
...................................................................................................................TCTCACATTTACATATTCACAGAAA.............................................................25115.001500000015520002000
....................................................................................................................CTCACATTTACATATTCACAGT...............................................................22115.001510100031024300000
......................................................................GTGGGTATC-TGGATGTGGTTGGT...........................................................................................................23110.001000000001006003000
...................................................................................................................TCTCACATTTACATATTCACAGC...............................................................23110.001030100014100000000
...................................................................................................................TCTCACATTTACATATTCACAAA...............................................................2328.501700000015550001000
......................................................................GTGGGTATC-TGGATGTGGTT..............................................................................................................2017.00700010020103000000
......................................................................GTGGGTATC-TGGATGTGGTTGGCTC.........................................................................................................2517.00700000000000070000
......................................................................GTGGGTATC-TGGATGTGGT...............................................................................................................1917.00700000200005000000
....................................................................................................................CTCACATTTACATATTCACA.................................................................2017.00700012400000000000
...................................................................................................................TCTCACATTTACATATTCACAAAA..............................................................2426.001200000012720000000
......................................................................GTGGGTATC-TGGATGTGGTTGGC...........................................................................................................2316.00610000100002011000
....................................................................................................................CTCACATTTACATATTCAC..................................................................1915.00500002300000000000
...................................................................................................................TCTCACATTTACATATTCACG.................................................................2114.00410100002000000000
...................................................................................................................TCTCACATTTACATATTCACAGTAA.............................................................2514.00400300010000000000
...................................................................................................................TCTCACATTTACATATTCACAT................................................................2213.00300010001000100000
..................................................................................................................CTCTCACATTTACATATTCACAG................................................................2313.00300001000001010000
......................................................................GTGGGTATC-TGGATGTGGTTGGCT..........................................................................................................2413.00300000000001002000
...................................................................................................................TCTCACATTTACATATTCACACT...............................................................2313.00300000021000000000
...................................................................................................................TCTCACATTTACATATTCAA..................................................................2013.00300000000300000000
...................................................................................................................TCTCACATTTACATATTCACAGTT..............................................................2413.00300000011000001000
............................................................................................GCTCTG----------GCGGTCCTCTCAC................................................................................1912.00220000000000000000
...................................................................................................................TCTCACATTTACATATTCACAGGC..............................................................2412.00200000200000000000
...................................................................................................................TCTCACATTTACATA.......................................................................1512.00200000010100000000
...................................................................................................................TCTCACATTTACATATTCACAGGCGC............................................................2612.00200000200000000000
.....................................................................................................................TCACATTTACATATTCACAGA...............................................................2112.00200000010010000000
......................................................................GTGGGTATC-TGGATGTGGTTGA............................................................................................................2212.00200000000000002000
.......................................................................................................................ACATTTACATATTCACAG................................................................1812.00200000000000101000
...................................................................................................................TCTCACATTTACATATTCACATA...............................................................2312.00200000001100000000
............................................................................................GCTCTG----------GCGGTCCTCTCACATTT............................................................................2312.00210000000000001000
......................................................................GTGGGTATC-TGGATGTGGTTGGTA..........................................................................................................2412.00200000000000101000
....................................................................................................................CTCACATTTACATATTCACAGAA..............................................................2312.00200000010100000000
......................................................................GTGGGTATC-TGGATGTGG................................................................................................................1812.00200000000002000000
.......................................................................TGGGTATC-TGGATGTGGTTGG............................................................................................................2112.00200010000001000000
............................................................................................GCTCTG----------GCGGTCCTCTCACATTTACAT........................................................................2712.00200000000000020000
......................................................................................................................CACATTTACATATTCACAG................................................................1912.00200000100001000000
.....................................................................................................................TCACATTTACATATTCACAG................................................................2012.00200001000000100000
....................................................................................................................CTCACATTTACATATTCACAGTT..............................................................2311.00100000010000000000
..................................................................................................................CTCTCACATTTACATATTCAC..................................................................2111.00100000100000000000
..........................................................................................................................TTTACATATTCACAG................................................................1521.00200000000002000000
.....................................................................................................................TCACATTTACATATTCACA.................................................................1911.00100000100000000000
.................................................GGCACTGAAGCTGCGC........................................................................................................................................1611.00100000000001000000
...................................................................................................................TCTCACATTTACATATTCACAAT...............................................................2311.00100000000001000000
.......................................................................................................................ACATTTACATATTCACAGT...............................................................1911.00100000000001000000
..............................................................................................................................................................................AGTGGAAAGCTCTCGGACAGCGATGCC2711.00100000010000000000
................................................................................................................TCCTCTCACATTTACATATTCAC..................................................................2311.00100001000000000000
..................................................................................................................CTCTCACATTTACATATTCACA.................................................................2211.00100000000000001000
............................................................................................GCTCTG----------GCGGTCCTCTCACATTTACATA.......................................................................2811.00100000000000010000
...................................................................................................................TCTCACATTTACATATTCAG..................................................................2011.00100100000000000000
....................................................................................................................CTCACATTTACATATTCA...................................................................1811.00100001000000000000
......................................................................GTGGGTATC-TGGATGTGGTTGGCA..........................................................................................................2411.00100000000000001000
..................................TGAGATGCGCGAACTGGCACTGAAGC.............................................................................................................................................2611.00100000000001000000
......................................................................GTGGGTATC-TGGATGTGGTTGGCTCTG----------.............................................................................................2711.00101000000000000000
........................................................................................................................CATTTACATATTCACAG................................................................1711.00100000000001000000
......................................................................................................................CACATTTACATATTCACAGT...............................................................2011.00100000000001000000
.......................................................................TGGGTATC-TGGATGTGGTTGGC...........................................................................................................2211.00100010000000000000
...................................................................................................................TCTCACATTTACATATTCACAGGA..............................................................2411.00100000000100000000
............................................................................................GCTCTG----------GCGGTCCTCTCACATTTACA.........................................................................2611.00100000000100000000
......................................................................GTGGGTATC-TGGATGTGGTTGGG...........................................................................................................2311.00100000000000001000
.........................................................................................................................ATTTACATATTCACAG................................................................1611.00100000001000000000
.....................................................................................................................................................................................AGCTCTCGGACAGCGATGCC2011.00100100000000000000
..........................................................................GTATC-TGGATGTGGTTG.............................................................................................................1711.00100000000001000000
...................................................................................................................TCTCACATTTACATATTCACGA................................................................2211.00100000001000000000
......................................................................GTGGGTATC-TGGATGTGGTTC.............................................................................................................2111.00100000000001000000
AGCGGGAACGACTGCA.........................................................................................................................................................................................1611.00100000000001000000
.........................................................................GGTATC-TGGATGTGGTTGG............................................................................................................1911.00100000000001000000
...................................................................................................................TCTCACATTTACATAT......................................................................1611.00100000010000000000
......................................................................GTGGGTATC-TGGATGTGGTTGGGG..........................................................................................................2411.00100000000001000000
....................................................................................................................CTCACATTTACATATTCACAGTA..............................................................2311.00100000010000000000
......................................................................GTGGGTATC-TGGATGTG.................................................................................................................1720.50100000000001000000
...................................................................................................................TCTCACATTTACATATTCACACAA..............................................................2440.25100000000100000000
..............................................................................C-TGGATGTGGTTGGA...........................................................................................................15190.05100000001000000000
droSec2
AGCGGGAACGACTGCAGCAGCAGGAGCGCGAGGATGAGATGCGAGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCTCGGACAGCGATGCCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...................................................................................................................TCTCACATTTACATATTCACAG................................................................2211542.001542144055146
...................................................................................................................TCTCACATTTACATATTCACA.................................................................211544.00544435122473
......................................................................GTGGGTATC-TGGATGTGGTTGG............................................................................................................221234.00234154513341
...................................................................................................................TCTCACATTTACATATTCACAGT...............................................................231169.0016997133920
....................................................................................................................CTCACATTTACATATTCACAG................................................................211110.00110109010
...................................................................................................................TCTCACATTTACATATTCAC..................................................................20174.007467007
......................................................................GTGGGTATC-TGGATGTGGTTG.............................................................................................................21162.00626202313
...................................................................................................................TCTCACATTTACATATTCACAGA...............................................................23141.004136005
....................................................................................................................CTCACATTTACATATTCACA.................................................................20135.003534001
....................................................................................................................CTCACATTTACATATTCACAGT...............................................................22130.003019353
...................................................................................................................TCTCACATTTACATATTCACAC................................................................22121.002121000
...................................................................................................................TCTCACATTTACATATTCA...................................................................19116.001620014
...................................................................................................................TCTCACATTTACATATTCACAGC...............................................................2319.0099000
.....................................................................................................................TCACATTTACATATTCACAG................................................................2017.0077000
......................................................................GTGGGTATC-TGGATGTGGTTGGA...........................................................................................................2316.0061401
......................................................................GTGGGTATC-TGGATGTGGTTGGT...........................................................................................................2316.0060240
......................................................................GTGGGTATC-TGGATGTGGTTGGC...........................................................................................................2315.0050212
...................................................................................................................TCTCACATTTACATATTCACG.................................................................2114.0043010
....................................................................................................................CTCACATTTACATATTCACAGA...............................................................2214.0043100
...................................................................................................................TCTCACATTTACATATTCACAT................................................................2214.0044000
.......................................................................................................................ACATTTACATATTCACAG................................................................1814.0044000
......................................................................GTGGGTATC-TGGATGTGGTTGT............................................................................................................2213.0030210
......................................................................GTGGGTATC-TGGATGTGGTT..............................................................................................................2013.0030111
...................................................................................................................TCTCACATTTACATATTCACAA................................................................2213.0033000
......................................................................GTGGGTATC-TGGATGTGG................................................................................................................1813.0030012
....................................................................................................................CTCACATTTACATATTCACAGTT..............................................................2313.0032001
...................................................................................................................TCTCACATTTACATATTCACAGCA..............................................................2413.0031002
..................................................................................................................CTCTCACATTTACATATTCACAG................................................................2313.0033000
....................................................................................................................CTCACATTTACATATTCAC..................................................................1913.0033000
.......................................................................TGGGTATC-TGGATGTGGTTGGT...........................................................................................................2212.0022000
......................................................................GTGGGTATC-TGGATGTGGTTGA............................................................................................................2212.0020101
.....................................................................................................................TCACATTTACATATTCACAGT...............................................................2112.0021010
...................................................................................................................TCTCACATTTACATATTCACAGTT..............................................................2412.0021001
......................................................................................................................CACATTTACATATTCACA.................................................................1812.0022000
........................................................................GGGTATC-TGGATGTGGTTGG............................................................................................................2012.0021001
...................................................................................................................TCTCACATTTACATATTCACAGG...............................................................2311.0011000
...................................................................................................................TCTCACATTTACATATTCACATT...............................................................2311.0010001
.......................................................................TGGGTATC-TGGATGTGGTTGG............................................................................................................2111.0010001
.....................................................................................................................TCACATTTACATATTCACA.................................................................1911.0010001
...............................................................................................................................................................................GTGGAAAGCTCTCGGACAGC......2011.0010010
...................................................................................................................TCTCACATTTACATATTCACACC...............................................................2311.0011000
.......................................................................TGGGTATC-TGGATGTGGT...............................................................................................................1811.0011000
......................................................................GTGGGTATC-TGGATGTGGTTGCA...........................................................................................................2311.0010100
....................................................................................................................CTCACATTTACATATTCACAC................................................................2111.0011000
......................................................................GTGGGTATC-TGGATGTGGTTGGTA..........................................................................................................2411.0010001
...................................................................................................................TCTCACATTTACATATTCACACA...............................................................2311.0011000
......................................................................GTGGGTATC-TGGATGTGGTTT.............................................................................................................2111.0011000
...............AGCAGCAGGAGCGCGAGGATGAG...................................................................................................................................................................2311.0010010
....................................................................................................................CTCACATTTACATATTCACAGTAA.............................................................2411.0011000
......................................................................GTGGGTATC-TGGATGTGGTTGGCT..........................................................................................................2411.0010100
...................................................................................................................TCTCACATTTACATATTCACACT...............................................................2311.0011000
.....................................................................................................................TCACATTTACATATTCAC..................................................................1811.0011000
....................................................................................................................CTCACATTTACATATTCACAGC...............................................................2211.0011000
...................................................................................................................TCTCACATTTACATATTCACAGAA..............................................................2411.0011000
......................................................................GTGGGTATC-TGGATGTGGT...............................................................................................................1911.0010001
...................................................................................................................TCTCACATTTACATATTCAGT.................................................................2120.5010010
dm3
AGCGTGAACGACTGCAACAGCAGGAACGCGAGGATGAGATGCGCGAACTGGCCCTCAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCTCGGACAGCGATGCCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................TCTCACATTTACATATTCACAG................................................................22170566.007056600003711242551712421347101410123314303386928242354411122211131813453136354223369773470002061225400000000000000000476461351401371969712018649689043177433032323035036033432214330237338740757870129362618916945259124521125770118711107631020420391170100010432201224341798863425151141023223481050515118116279591133570370148269404322621249738487361666111209013834371200025242200000914000000243032581064116149144848217537834910783980518115335349148700003818224164120084197191389253022135166680155854165971644327240101360089411433362452198587167530334422821216257658718326913752316214147501727641527152163020316213223222594254320464142091120
...................................................................................................................TCTCACATTTACATATTCACA.................................................................21131735.003173500003341432456220001000160120066051231041334112632310235483107111373000126200000000000000000314327259223468521776311646534326331691472371179135174531992275102767765015544749218322374422103212101751777881837220962642142425800000000701015161184261099444446122300143451404102971095630464603484501232776416894504012920119415828120005063200000061000006192109447255581621543671670216427118213034512770000231811126822003341773055775096474521017825176329475241048115414283184282661732027603103666650347428712315566654109127710636131379815313841511201512233311141436102515323156511773041122340
......................................................................GTGGGTATC-TGGATGTGGTTGG............................................................................................................22129033.00290330000100320100201000002120120100000264115331612001151834050039011000000000000000000120002916027121136422211812434052218040768568111312949202100010001103000010000006763372526391523185127158142701810037131013550210060423313570600201241011010301073440125930310015415766244179178920102535142229164030600000131001310019022285351343514966698215474247331741528840371387687192877452252193352221288916626198322823606463332199881437217133693408542472245418315578611659989184226415342283281310671962227129327119696036962833986655812010
...................................................................................................................TCTCACATTTACATATTCACAGT...............................................................23118392.0018392000001223105050000005112001810000000214121021332754124311124305066307000000000000000000000009770616601713414371247422229487202000324125075164281131212631677244018401062716020150000000000750104100402311464634873397674290000097811983233417021003181110374321901831604312363024000200141500000191800000011268496751644801663565124107719243016426162000016717740627910478373511624433421532877422980961132024205276252168372405874192395112349014411696944030354606159844812121393213324032657368913134265591223701301101066104506667651813629278581304223022200
......................................................................GTGGGTATC-TGGATGTGGTTG.............................................................................................................2117808.00780800000023000100100000242400200000001652201131310031351144200100000000000000000000000116433104316002006113006820165249574613413402000000001000000012000029470219162617175252114141202150649040201000302100120271303426000004901050510000005862241016093343588845200500007400014517131146141233623282221817355954192210232584726723215026425612334311915123278202823515664608291314318819901724519761891341213032454694817739319430723760471235423101629176100155212630
...................................................................................................................TCTCACATTTACATATTCAC..................................................................2014417.00441700009100000104100200000200200464760010000000310120001201000310000000000000000001331321047615817678845854194741153156620283910877011123079202535702542033002022306879474000000000001000000003000000000383555141163210301000066854650150314910115400234401000010000000000000000234200032837875202719809922137000000012392403613503743031062125524283110344001512211013518151412103320000001220001010010000000100001220430
....................................................................................................................CTCACATTTACATATTCACAGT...............................................................2212815.0028150000000000000000000001010334000000000000102900130426310000000000000000000000094730203211218204504104003101318172205010013010110101010220000000000031604104231210580000016033033106106612051130015406841400020100000000000000383682511231119301956243674250000610027152722027111421418017510146813389658109642781152079779566725173952131481514132137121316351113504611603747631385457423030211612233410371980
...................................................................................................................TCTCACATTTACATATTCACAGA...............................................................2311590.001590000010000001010000000003001000000000100000000100112110000000000000000000000026221870450066210110321200140071029122211006041000201051480000000000000000301050012000006070009160130071206015125102000222110000001000000010000004300100149329514023743104175330038000011000211301100001201100004010085330810328145170051122341000000101000013100401100002000000000007230
...................................................................................................................TCTCACATTTACATATTCA...................................................................1911577.001577000000000000000000000000000002294710100000000000000000000010000000000000000000303721141010500108134161030470033193242864174162140250237450321147163350000000000000000000010000000008014100101020520047502330134011120317001510000000000000000000000000110010000010025004000000002000000016231261512004129084522100010000442183611140010600000000000000010000000000010000003000
......................................................................GTGGGTATC-TGGATGTGGTTGGT...........................................................................................................231804.00804000000000000000000001100000000000000000000000000101100000000000000000000000000000001000100200100000000005951001000000000000000001000000000000240001100000410002100000000000000000001000010002000000102000000000000500111510020102223102000001000423001018014212713513482541210110000080110942125000390184152111501315231737227161546412624824269103141410112440
...................................................................................................................TCTCACATTTACATATTCACAC................................................................221739.0073900000000100100000000000000000000000000200100000000300000000000000000000000004123137051365101301160001203251740112300120200200000003100000000000000002100000000000050702018040001000301000700000010000000000000000000000001101042975668717368111101800000000000000001000010300000001003110120015040010100002000000300000000012300000000000000000000000
......................................................................GTGGGTATC-TGGATGTGGTT..............................................................................................................201652.0065200000000000000000000000000000000006501000000010100011000000000000000000000000000000002003002000000002000037400000001000000000000000001000000000001114100005100200001300100000000110110000000100000000010000000000003152851224131203200000001000000010000620200100144041129836411000000231207214260102612541005123361661615144621137318227512420118891240
...................................................................................................................TCTCACATTTACATATTCACAT................................................................221412.00412000010000000100000000001010000000000001005000000000000000000000000000000000021230114601529010173032110000004746100000030010000010618900000000000000121210202002100020300160304004300000100220030010000000000000000000000210100987265513210316110010010013200000002201104100102112331130112020220400001000010000000000000000000000000000000110000
....................................................................................................................CTCACATTTACATATTCACAG................................................................211401.004010000000000000100000000000010000000100000000000000000000010100000000000000000300420000213201102232200173131220174407013402000000000021000000000000000011000000000000300000511010002414051110020001300000000000000000000000002001001748722114191224800000000003000010000000200200007034320140504043110110000000000000000031000000000001000000000009220
...................................................................................................................TCTCACATTTACATATTCACAA................................................................221368.003680000437401130400000000020000000000000000000000010000000000000000000000000000221441251098000412033214004504528060034002103100000001020000000000000000100000000000000200084060500060505020003006000000000000000001000000000000091298911222310300000000000020010000000000001000044500430023110000100000000000000000102000100000000100000000001020
......................................................................GTGGGTATC-TGGATGTGGT...............................................................................................................191313.0031300000000000000000000001000001000004110100100000000001000000000000000000000000000000000010000000000000000330010000100000000000000000000000000000014110002000300100010001000000101000500000001000000000000000000200010051101002020000010000000011111000133001020202702914221100000300014010001221012017416121000161211132626141321523421101472350
......................................................................GTGGGTATC-TGGATGTGG................................................................................................................181267.002670000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000100011300000000000000000000000000000000010020010001200010010000000000000000100000000000000000000020000000000000204411000120020000000000000000101002000000000050210000100000000011111220026110900709000000077651139113101622512010000148410
....................................................................................................................CTCACATTTACATATTCACA.................................................................201200.00200000000000000000000000000000000000000000000000000000000001000000000000000000021110000004210000051100024049510000000001301001200042000000000000000000000000000000000100860600210012070900000014000000000000000000000000022010011113026102200000000000000000200410310011004041040000102000000001020000000000000011000100000000100000000012020
...................................................................................................................TCTCACATTTACATATTCACAGC...............................................................231199.00199000000000000000000000000000000000000002000100000011100000000000000000000000002100000000000010002000104023301100000100100000100001000000000000010000010000000000000000010000010110001000000000000000000000000000000000000081565034300300000000001100000001010001000101032010312042332272150210020000000301000001000010100000000000010013200
.....................................................................................................................TCACATTTACATATTCACAG................................................................201199.00199000000000000000000000200000000000000100101100101030000000000000000000000000014920000001000000000000000030400000100001000000001010000000000000100030000030300100002000020000040201000010000000000000000000000000000000000131643128126700200000000001010000100100010102106019600020010200000101000000000100000000000111000100000000000020000
......................................................................GTGGGTATC-TGGATGTGGTTGT............................................................................................................221160.001600000000000000000000000000000000000000000010000100010000000000000000000000000001000020002001000000000000101001000000000000000000000000000000000140020000000000000020000000000000010110000000000000001000000000000000003100000000000000000000000139010001113803010100031110000000010021302100150006010140200000231331005634212302200304300
...................................................................................................................TCTCACATTTACATATTCACC.................................................................211137.0013700000000000000000000000000000000000000000000000000010000000000000000000000001100100020100001010001000002110000000002111400020202301420000000000000000000000000000000000020010500000001010010001000000000000000000000000000000000010000000100000000012110110000420100000001002010000001000000000000000100000000010000000000000000000000000000
......................................................................GTGGGTATC-TGGATGTGGTTGGA...........................................................................................................231130.0013000000000000000000000000000000000000010000000000000100000000000000000000000000000000400000000000000000000100000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000001001001010000001000000000000100000100021111400210000001000100002060000100080011303000205112114161131212630001413210
....................................................................................................................CTCACATTTACATATTCACAGA...............................................................221123.001230000000000000000000000000010000000000000000001000000000000000000000000000000011100000011000000010000001831000000000000000000000000000000000000000000000000000000000002102000000011000000040000000000000000000000001000000502572591001700000000001000000000010000001003020100000006021020200010000100100000002000200100100100000000021020
...................................................................................................................TCTCACATTTACATATTC....................................................................181122.001220000000000000000000000000002101110000000000000000000000000000000000000000000307400000020011000400000220202211000004010000000058880034000000000000000000000000000000000201120101170100000016000000000000000000000000003000000010000000000000000000000000000010000000000001000000000000010000100000000000000000000000000000000000000000000
.....................................................................................................................TCACATTTACATATTCACA.................................................................191103.00103000000000000000000000000001000000000000000001000010000000000000000000000000001310000000100000010000000050300000000001000010000010000000000000000010000000010000100000010000021102000000000000000000000000000000000100000016100212400100001000002450000001330101100213069301000001000010110000000000000000000000100001000000000000000000
......................................................................GTGGGTATC-TGGATGTGGTTGGC...........................................................................................................231101.00101000001000000000000000000000000000000000000000010000000000100000000000000000000010000000000000000000000001200000000000000000000000000021000000000001002000000000000100000000000000010000000010000010100000000000000000200100111200000000000100011000000110200100000000000101000000002010000002000400143141300033011401521312312111200100
.....................................................................................................................TCACATTTACATATTCACAGT...............................................................21198.0098000000000000000000000100004000000000000100102101001210000000000000000000000000000000000000000000000000000100000000000000000000000000000000001100012001102100000200000000000000000000000000000000000000000000000000000000020000023000100000000000130000100200101201104120311120100443020010010000000000011000000313200201100000000011010
...................................................................................................................TCTCACATTTACATATTCACATT...............................................................23191.0091000000000000000000000000003000000000001101000100000000000000000000000000000010300130103000300000000000000000000000000000000000000000000000000400000022000100100001002000000000000000000000000000000000000011000000221000020000000110200000000000020000000440505000100000220110101010250410000000000000000000000000100000000000000000000
.......................................................................TGGGTATC-TGGATGTGGTTGG............................................................................................................21183.0083000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000102000010000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000100010000001000001010000000000010000000000200203011001005362818551241000000113010
...................................................................................................................TCTCACATTTACATATTCACAGG...............................................................23171.00710000000000000000000000000000000000000000000000000000000012720000000000000000010100000000000010000000000000110000000000000010000000000000000000000000000000000000100000000000000001001000002000100000000000000000000000000000101002002100000000000000000000000110000000000100040004450020201100000000000000000000000000200000000000002010
......................................................................GTGGGTATC-TGGATGTGGTTT.............................................................................................................21171.0071000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000000000000000020000000000000000100001000000000000100010010000000000000000001000000000000000000000010020110001100000000001000002310000211020303110014111020000000000000100001000102011010100000011301200002010001020000
...................................................................................................................TCTCACATTTACATATTCACAGTT..............................................................24168.0068000000000000000000000000000000000000000000200000000000000000000000000000000010100000000000000000000000044260000000000000000002010000000000000100010000000000000000000000100010000000000000101000000000000000000000000000120121021100000000000001000000000000101000200020100100113040020010100000000000000000000010100000000101000001010
......................................................................GTGGGTATC-TGGATGTGGTTGGTA..........................................................................................................24165.0065000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030011000010110000000000100000100000000010000000000000000000000000020100000010800115010000110120601550101401010111000
........................................................................GGGTATC-TGGATGTGGTTGG............................................................................................................20158.0058000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000010010000000000000001010100101010200001000020100000000000110200000000302003000100000050213303210100100041100
......................................................................GTGGGTATC-TGGATGTGGTTGC............................................................................................................22154.0054000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000102110000000000110000000100100130100000000400024011010010201301511300000000102010
...................................................................................................................TCTCACATTTACATATTCACG.................................................................21150.0050000000000000010000000000000000000000000000000000000000000000000000000000000010000000021001000000000011001030000000000000000000010000000000000000000000000000000000000110400120001020000006000000000000000000000000000000000000000100200000000011320000000000000000000101010020000010000201000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATTTACATATTCAG..................................................................20144.00440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000200000000000000000000000000000000000000000000000020000000010000000000000000000000000000000321492113000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000
..................................................................................................................CTCTCACATTTACATATTCACAG................................................................23142.0042000000000000000000001100000000000000000000000000000000000000000000000000000001110000000000000000000000000002000000000000000000000000000000000000001001000000000000000010010020201000000000000000000000000000000000000000021015122000100000000001000000000000000100000100000121010100000100000000000000000000000000000010000000000000000
...................................................................................................................TCTCACATTTACATATTCACACT...............................................................23140.0040000000000000000000000000000000000000001001100000002000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000020310002000000000000000000000000210204000000010130020001211010000000000001000000000000000000000000000000000000
......................................................................GTGGGTATC-TGGATGTGGTTGA............................................................................................................22137.0037000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000110000010000000001001001100000300000100100004000302102000000022000201110000100000000000
.......................................................................TGGGTATC-TGGATGTGGTTG.............................................................................................................20132.0032000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000100100000000001000000000000010000000000000000004000000000000000000000300001000000010000000000100311302200000000100000
...................................................................................................................TCTCACATTTACATATTCACAGAA..............................................................24132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000020400010000000110000000001100001000000000000000020000000000000000000000000000000000000000000000102000000000100000000000000000000000000000001011222000000000000000000000000000000000000001000000010000000100001000000000000000000000000000000000000001000
.......................................................................................................................ACATTTACATATTCACAG................................................................18132.0032000000000000000000000000000000000000000000000000000100000000000000000000000033120000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100010201100000000000000000000000000000000000000000030010200000000000000000000000000000000000001110001000020000000000000000000000010000000100000000000000001000
...................................................................................................................TCTCACATTTACATATTCACAGATC.............................................................25131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATTTACATATTCACT.................................................................21131.0031000002000000000000000000000000000000000000000000000000000000000000000000000010000101000000010000000000010001000000010000000101001000000000000000000000000000000000001050200010000000000000000000000000000000000000000000000000000000000000000000320000100000000100001001010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTCACATTTACATATTCAC..................................................................19130.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000010003000001000000000000000000000000000000000000000000000000000000100200220102000010009000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATTTACATATTCACAGTAA.............................................................25129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000022232216000000000000000000000000000000000000000000100000110000000001000000001000000000000000000000000001000000
...................................................................................................................TCTCACATTTACATATTCACAGTA..............................................................24128.0028000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000002005000000001000000001000000000000000000000100000000000000000000100000100000000000000000000000000000000000000000012204101000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000010000000
...................................................................................................................TCTCACATTTACATATTCACACC...............................................................23128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062225003000100000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000010
......................................................................GTGGGTATC-TGGATGTGGTTGGCT..........................................................................................................24126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000100111000000020000100210100000
......................................................................GTGGGTATC-TGGATGTGGTTGGG...........................................................................................................23123.0023000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100001201000000000000000000000000000001000000000200011113000011000000021000000000000000
..................................................................................................................CTCTCACATTTACATATTCACAGT...............................................................24123.00230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000112020000100200000000100000000000000000000000000000000000
....................................................................................................................CTCACATTTACATATTCACATT...............................................................22123.0023000000000000000000000000002000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000050000000000000000000000000000000000000000000000000000010000000000000002000000010000000000300000000001110000000000000200000000100000000000000000000000000000000000100
...................................................................................................................TCTCACATTTACATATTCACAAA...............................................................23222.5045000000000000000000000000000000000000000000000000000000000000000000000000000000000300040000120001200011101000001000000000000000000000000000000200001000000000000000000000100000000000000002001000000100000000000000000000050003017000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATTTACATATTCAA..................................................................20122.0022000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000010010100000102000000000500000000000020000000000000000000000000000000000000010000000003000000001000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTCACATTTACATATTCACAGC...............................................................22122.0022000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000100000000100000000000000001000000000000000000000000000100000010000000000000000000000000000010000000002000100000000010110000000101000000000000000000100000000000100000000
.......................................................................................................................ACATTTACATATTCACAGT...............................................................19120.0020000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001010000130202020020000010000100000000000000000000000000000000000000
......................................................................................................................CACATTTACATATTCACAG................................................................19119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000120000101000000000000000010100000000000000000000010000000000000000010100000000000000000010000001200000000000000000010000000000000000000000000000010100000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATTTACATATTCACACA...............................................................23118.0018000000000000000000000000000000000000000000000000001000000000000000000000000000000000010010000002000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032110200100000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................CTCTCACATTTACATATTCACA.................................................................22118.0018000000000000000000000000000000001000000000000000001000000000000000000000000000210000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000004000000100002000000000000000000000000000000000000000000000000000000100000000000000000000000101000000000000000000000
......................................................................GTGGGTATC-TGGATGTGGTTGGCTC.........................................................................................................25117.0017000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000010000030000000000000000000000000000000000000001000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000010000000010000000000000000200000100100010000000
........................................................................GGGTATC-TGGATGTGGTTG.............................................................................................................19116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000015100000000000000000000500000000100000000000000000001000000000000010000
......................................................................GTGGGTATC-TGGATGTGGTTTT............................................................................................................22116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100001000160101000000001000000000000000001001000000000000000000000000000000000000000000
droEre2
AACGGGAACGACTGCAACAGCAGGAGCGCGAGGACGAGATGCGTGAACTGGCCCTGAAACTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTACGGAACGCCCTCGAGTGGAAAGCTCTCGGGCAGCGAGGCGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................TCTCACATTTACATATTCACAG................................................................2212190.0021901858622523241980
...................................................................................................................TCTCACATTTACATATTCACA.................................................................2111194.001194833512025132520
...................................................................................................................TCTCACATTTACATATTCACAGT...............................................................231187.0018772119235580
......................................................................GTGGGTATC-TGGATGTGGTTGG............................................................................................................221179.0017953620331120
....................................................................................................................CTCACATTTACATATTCACAG................................................................211137.00137134010020
...................................................................................................................TCTCACATTTACATATTCAC..................................................................201132.0013210214101140
....................................................................................................................CTCACATTTACATATTCACA.................................................................20163.006363000000
....................................................................................................................CTCACATTTACATATTCACAGT...............................................................22142.00421241013120
......................................................................GTGGGTATC-TGGATGTGGTTG.............................................................................................................21133.003321234210
...................................................................................................................TCTCACATTTACATATTCACAGA...............................................................23124.002418001050
...................................................................................................................TCTCACATTTACATATTCA...................................................................19122.002250000170
...................................................................................................................TCTCACATTTACATATTCACAA................................................................22113.001312000010
...................................................................................................................TCTCACATTTACATATTCACAC................................................................22111.00118300000
...................................................................................................................TCTCACATTTACATATTCACAT................................................................2218.0086000020
.....................................................................................................................TCACATTTACATATTCACAG................................................................2017.0075000020
...................................................................................................................TCTCACATTTACATATTCACAGC...............................................................2317.0071300120
..................................................................................................................CTCTCACATTTACATATTCACAG................................................................2315.0054100000
....................................................................................................................CTCACATTTACATATTCAC..................................................................1915.0055000000
....................................................................................................................CTCACATTTACATATTCACAT................................................................2115.0055000000
....................................................................................................................CTCACATTTACATATTCACAGC...............................................................2214.0042200000
......................................................................GTGGGTATC-TGGATGTGGTTT.............................................................................................................2114.0040012100
......................................................................GTGGGTATC-TGGATGTGGTTGGC...........................................................................................................2314.0040000220
......................................................................GTGGGTATC-TGGATGTGGTTGGT...........................................................................................................2314.0040000220
...................................................................................................................TCTCACATTTACATATTCACG.................................................................2113.0033000000
....................................................................................................................CTCACATTTACATATTCACAGA...............................................................2213.0032100000
......................................................................GTGGGTATC-TGGATGTGGTT..............................................................................................................2013.0031000110
...................................................................................................................TCTCACATTTACATATTCACAGTA..............................................................2412.0022000000
......................................................................GTGGGTATC-TGGATGTGGT...............................................................................................................1912.0020000110
...................................................................................................................TCTCACATTTACATATTCACAAA...............................................................2312.0022000000
...................................................................................................................TCTCACATTTACATATTCACACC...............................................................2312.0022000000
......................................................................................................................CACATTTACATATTCACA.................................................................1812.0021100000
...................................................................................................................TCTCACATTTACATATTCACAGTT..............................................................2412.0021000010
.......................................................................TGGGTATC-TGGATGTGGTTGG............................................................................................................2112.0020000020
.....................................................................................................................TCACATTTACATATTCACA.................................................................1912.0021000010
....................................................................................................................CTCACATTTACATATTCACAGTTT.............................................................2411.0010000010
..................................................................................................................CTCTCACATTTACATATTCACA.................................................................2211.0011000000
.....................................................................................................................TCACATTTACATATTCACAGT...............................................................2111.0011000000
...............................................................................................................................................................................GTGGAAAGCTCTCGGGCAGC......2011.0010001000
....................................................................................................................CTCACATTTACATATTCACAA................................................................2111.0011000000
.......................................................................................................................ACATTTACATATTCACAG................................................................1811.0011000000
....................................................................................................................CTCACATTTACATATTCACAC................................................................2111.0011000000
...................................................................................................................TCTCACATTTACATATTCAA..................................................................2011.0010000010
......................................................................................................................CACATTTACATATTCACAG................................................................1911.0010001000
......................................................................GTGGGTATC-TGGATGTGG................................................................................................................1811.0010000100
......................................................................GTGGGTATC-TGGATGTGGTTGGCTC.........................................................................................................2511.0010000010
......................................................................GTGGGTATC-TGGATGTGGTTGGTA..........................................................................................................2411.0010000010
.......................................................................TGGGTATC-TGGATGTGGTTGGC...........................................................................................................2211.0011000000
...................................................................................................................TCTCACATTTACATATTCACGC................................................................2211.0010000010
......................................................................................................................CACATTTACATATTCACAGT...............................................................2011.0010000010
....................................................................................................................CTCACATTTACATATTCACAGTAA.............................................................2411.0011000000
...................................................................................................................TCTCACATTTACATATTCACAAAA..............................................................2411.0011000000
...................................................................................................................TCTCACATTTACATATTCACC.................................................................2111.0010001000
..............................................................................................................................................................................AGTGGAAAGCTCTCGGGC.........1811.0011000000
......................................................................GTGGGTATC-TGGATGTGGTTGGCTCT........................................................................................................2611.0010000010
droYak3
AGCGGGAACGACTGCAACAGCAGGAGCGCGAGGACGAGATGCGTGAACTGGCTCTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATTTACATATTCACAGGCGTCGTGAGCTGCGACACAAATATGGAACGCCCTCGAGTGGAAAGCTCTCGGGCAGCGAGGCGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................TCTCACATTTACATATTCACAG................................................................2211814.0018144601274332761121000
...................................................................................................................TCTCACATTTACATATTCACA.................................................................211864.00864497241634181940000
...................................................................................................................TCTCACATTTACATATTCACAGT...............................................................231173.001736115161141290000
....................................................................................................................CTCACATTTACATATTCACAG................................................................211129.001291127100000000
...................................................................................................................TCTCACATTTACATATTCAC..................................................................201102.001021287200100000
....................................................................................................................CTCACATTTACATATTCACA.................................................................20179.0079079000000000
......................................................................GTGGGTATC-TGGATGTGGTTGG............................................................................................................22174.00740839171540000
......................................................................GTGGGTATC-TGGATGTGGTTG.............................................................................................................21136.00361213140420000
....................................................................................................................CTCACATTTACATATTCACAGT...............................................................22133.0033119442210000
...................................................................................................................TCTCACATTTACATATTCACAC................................................................22114.001467100000000
...................................................................................................................TCTCACATTTACATATTCACAGA...............................................................23113.0013111000100000
.....................................................................................................................TCACATTTACATATTCACA.................................................................19111.0011010000100000
.....................................................................................................................TCACATTTACATATTCACAG................................................................2018.00808000000000
...................................................................................................................TCTCACATTTACATATTCACAA................................................................2218.00808000000000
...................................................................................................................TCTCACATTTACATATTCACAT................................................................2217.00707000000000
...................................................................................................................TCTCACATTTACATATTCACAGC...............................................................2316.00611400000000
...................................................................................................................TCTCACATTTACATATTCA...................................................................1915.00512010100000
.....................................................................................................................TCACATTTACATATTCACAGT...............................................................2115.00503010100000
..................................................................................................................CTCTCACATTTACATATTCACAG................................................................2315.00504010000000
....................................................................................................................CTCACATTTACATATTCAC..................................................................1914.00404000000000
.......................................................................................................................ACATTTACATATTCACAG................................................................1814.00404000000000
......................................................................................................................CACATTTACATATTCACAGT...............................................................2013.00302100000000
...................................................................................................................TCTCACATTTACATATTCACAGTA..............................................................2412.00200200000000
..................................................................................................................CTCTCACATTTACATATTCACA.................................................................2212.00202000000000
......................................................................................................................CACATTTACATATTCACAG................................................................1912.00202000000000
......................................................................GTGGGTATC-TGGATGTGG................................................................................................................1812.00201100000000
...................................................................................................................TCTCACATTTACATATTCACAGTT..............................................................2412.00201100000000
...................................................................................................................TCTCACATTTACATATTCACC.................................................................2112.00200010100000
....................................................................................................................CTCACATTTACATATTCACAGTT..............................................................2311.00101000000000
......................................................................GTGGGTATC-TGGATGTGGTTGGC...........................................................................................................2311.00100100000000
......................................................................GTGGGTATC-TGGATGTGGTA..............................................................................................................2011.00100100000000
....................................................................................................................CTCACATTTACATATTCACAGTAA.............................................................2411.00100100000000
............................................................................................GCTCTG----------GCGGTCCTCTCACATTT............................................................................2311.00110000000000
...................................................................................................................TCTCACATTTACATATTCACAGG...............................................................2311.00101000000000
......................................................................GTGGGTATC-TGGATGTGGC...............................................................................................................1911.00100100000000
....................................................................................................................................................................AACGCCCTCGAGTGGAAAGCTCTC.............2411.00100000010000
......................................................................GTGGGTATC-TGGATGTGGTTGGCTC.........................................................................................................2511.00100100000000
......................................................................................................................CACATTTACATATTCACA.................................................................1811.00101000000000
....................................................................................................................CTCACATTTACATATTCA...................................................................1811.00101000000000
...................................................................................................................TCTCACATTTACATATTCACAGAG..............................................................2411.00101000000000
......................................................................GTGGGTATC-TGGATGTGGTTGA............................................................................................................2211.00101000000000
.....................................................................................................................TCACATTTACATATTCACAGA...............................................................2111.00101000000000
..................................................................................................................CTCTCACATTTACATATTCACC.................................................................2211.00101000000000
.......................................................................................................................ACATTTACATATTCACAGT...............................................................1911.00101000000000
......................................................................GTGGGTATC-TGGATGTGGAA..............................................................................................................2011.00100100000000
......................................................................GTGGGTATC-TGGATGTGGTT..............................................................................................................2011.00100100000000
....................................................................................................................CTCACATTTACATATTCACAGGT..............................................................2311.00101000000000
.......................................................................TGGGTATC-TGGATGTGGTTGG............................................................................................................2111.00101000000000
......................................................................GTGGGTATC-TGGATGTGGT...............................................................................................................1911.00100100000000
......................................................................GTGGGTATC-TGGATGTGGTTGGT...........................................................................................................2311.00100000010000
....................................................................................................................CTCACATTTACATATTCACAGA...............................................................2211.00101000000000
......................................................................................................................CACATTTACATATTCACAA................................................................1920.50101000000000
......................................................................................................................CACATTTACATATTCACACT...............................................................2040.25100100000000
droEug1
AGCGGGAACGACTGCAACAGCAGGAGCGTGAGGACGAGATGCGTGAGTTGGCTTTGAAGCTGCGCAGGAGGTGGGTATC-TTGATGTGGTTGGCTCCG----------GCTGTCCTCTCACATCTGTATATTCACAGGCGTCGTGAGCTGCGTCACAAGTATGGAACGCCCTCAAGCGGCAAGCTGTCAGGTAGTGAAGCGSizeHit CountTotal NormTotal
No Reads
droBia1
AGCGGGAACGACTGCAGCAGCAGGAACGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGAAGGTGGGTATT-TTGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATCTATATATTCACAGGCGTCGTGAGCTGCGGCACAAATATGGCACGCCCTCCAGCGGCAAGCTCTCGGGCAGCGAGGCGSizeHit CountTotal NormTotal
No Reads
droTak1
AGCGGGAACGACTTCAGCAGCAGGAGCGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGGAGGTGGGTATC-TGGATGTGGTTGGCTCTG----------GCGGTCCTCTCACATCTACATATTCACAGGCGTCGTGAGCTGCGACACAAATACGGAACGCCCTCGAGCGGCAAGCTTTCTGGGAGCGAGGCGSizeHit CountTotal NormTotal
No Reads
droEle1
AAAGGGAGCGACTGCAGCAGCAGGAACGTGAGGACGAGATGCGCGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTTGGCTCTTC------T-GGGCGTCCTCTCACATCTACATATTCACAGGCGGCGTGAGCTGCGCCACAAGTATGGGACCCCTTCGAGCGGCAAGCTCTCGGGCAGCGAGGCGSizeHit CountTotal NormTotal
No Reads
droRho1
AACGGGAGCGACTGCAGCAGCAGGAGCGTGAAGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTCGGCTTTA----------GCGGTCCTCTCACATCTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTATGGTACACCCTCGAGTGGAAAGCTGTCGGATAGCGAGGCGSizeHit CountTotal NormTotal
No Reads
droFic1
AGCGGGAACGCCTGCAGCAGCAAGAGCGCGAGGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGAAGGTGAGTATC-TGGATGTGACTGGCTCTT----------GCGGTCCTCTCACATCTAGTTATTCTCAGGCGCCGTGAGCTGCGACACAAATACGGAACGCCATCGAGCGGCAAGCTATCGGGCAGCGAAGCASizeHit CountTotal NormTotal
No Reads
droKik1
AACGGGAGCGACTGCAGCAACAGGAGCGAGAGGACGAGATGCGGGAGCTGGCGCTGAAACTGCGTCGAAGGTGAGTATTGTGGGTGTGGGTGGCTCTGG------CGGCCAGTCCTCTCACATCACCATATTCACAGGCGTCGCGAGCTACGCCACAAATACGGCACGCCCTCCAGCGGAAAGCTCTCTGGCAGTGAGGCCSizeHit CountTotal NormTotal
No Reads
droAna3
AGCGGGAGCGTCAGCAGCAGCAGGAGCGGGAAGACGAGATGCGCGAACTGGCGCTCAAGCTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTTAT----TTGGCCGGTCCTCTCACATCTCCATATTCACAGGCGTCGAGAGCTGCGCCACAAGTATGGTACGCCCTCCAGCGGAAAACTTTCTGGAAGTGAGGCGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................TCTCACATCTCCATATTCACAG................................................................2212399.0023991838296108511294
...................................................................................................................TCTCACATCTCCATATTCACA.................................................................211983.009835263037047829
......................................................................GTGAGTATAGTGGATGTGGGTGG............................................................................................................231683.00683114503176385
...................................................................................................................TCTCACATCTCCATATTCACAGT...............................................................231593.0059326015125753349
...................................................................................................................TCTCACATCTCCATATTCAC..................................................................201316.0031679202128114
....................................................................................................................CTCACATCTCCATATTCACAG................................................................211118.0011811620000
...................................................................................................................TCTCACATCTCCATATTCACAGTT..............................................................24182.0082421138216
...................................................................................................................TCTCACATCTCCATATTCACAGC...............................................................23164.00642610100
...................................................................................................................TCTCACATCTCCATATTCACAGA...............................................................23162.006219401002
......................................................................GTGAGTATAGTGGATGTGGGTGGT...........................................................................................................24153.005370001333
....................................................................................................................CTCACATCTCCATATTCACA.................................................................20138.00383620000
....................................................................................................................CTCACATCTCCATATTCACAGT...............................................................22130.00302520021
...................................................................................................................TCTCACATCTCCATATTCACAA................................................................22128.00288181100
.......................................................................TGAGTATAGTGGATGTGGGTGG............................................................................................................22124.00248001213
......................................................................GTGAGTATAGTGGATGTGGGT..............................................................................................................21122.0022441067
...................................................................................................................TCTCACATCTCCATATTCACAGTA..............................................................24121.00213180000
......................................................................GTGAGTATAGTGGATGTGGGTG.............................................................................................................22120.0020300089
...................................................................................................................TCTCACATCTCCATATTCA...................................................................19117.0017450602
......................................................................GTGAGTATAGTGGATGTGGG...............................................................................................................20117.00172200103
...................................................................................................................TCTCACATCTCCATATTCACAC................................................................22112.0012363000
....................................................................................................................CTCACATCTCCATATTCAC..................................................................19111.0011830000
...................................................................................................................TCTCACATCTCCATATTCACAGTAA.............................................................25110.0010190000
......................................................................GTGAGTATAGTGGATGTGGGTGT............................................................................................................23110.0010200026
......................................................................GTGAGTATAGTGGATGTGG................................................................................................................19110.0010010018
.....................................................................................................................TCACATCTCCATATTCACAG................................................................2019.009520002
...................................................................................................................TCTCACATCTCCATATTCACAT................................................................2218.008206000
.......................................................................TGAGTATAGTGGATGTGGGTGGT...........................................................................................................2318.008000017
....................................................................................................................CTCACATCTCCATATTCACAGTT..............................................................2317.007500002
..................................................................................................................CTCTCACATCTCCATATTCACAG................................................................2316.006510000
......................................................................................................................CACATCTCCATATTCACAG................................................................1916.006420000
.......................................................................TGAGTATAGTGGATGTGGGT..............................................................................................................2015.005011111
.....................................................................................................................TCACATCTCCATATTCACAGT...............................................................2115.005400100
.......................................................................TGAGTATAGTGGATGTGGGTG.............................................................................................................2115.005010004
...................................................................................................................TCTCACATCTCCATATTCACAGG...............................................................2315.005410000
....................................................................................................................CTCACATCTCCATATTCACAGA...............................................................2214.004400000
..........................................................................GTATAGTGGATGTGGGTGG............................................................................................................1914.004300010
...................................................................................................................TCTCACATCTCCATATTCACC.................................................................2113.003002001
.....................................................................................................................TCACATCTCCATATTCACA.................................................................1913.003110100
..................................................................................................................CTCTCACATCTCCATATTCACA.................................................................2213.003030000
........................................................................GAGTATAGTGGATGTGGGTGG............................................................................................................2113.003000003
...................................................................................................................TCTCACATCTCCATATTCACAGAA..............................................................2413.003120000
.......................................................................TGAGTATAGTGGATGTGGG...............................................................................................................1912.002000002
......................................................................GTGAGTATAGTGGATGTGGGTGGA...........................................................................................................2412.002000011
...................................................................................................................TCTCACATCTCCATATTCACG.................................................................2112.002020000
.......................................................................................................................ACATCTCCATATTCACAGT...............................................................1912.002010001
......................................................................................................................CACATCTCCATATTCACA.................................................................1812.002110000
..................................................................................................................CTCTCACATCTCCATATTCACAGT...............................................................2412.002110000
..................................................................................................................CTCTCACATCTCCATATTCACAGTT..............................................................2512.002110000
...................................................................................................................TCTCACATCTCCATATTCACAGTTA.............................................................2512.002110000
......................................................................................................................CACATCTCCATATTCACAGT...............................................................2012.002110000
..................................................................................................................CTCTCACATCTCCATATTCA...................................................................2011.001010000
.............................................................................................CTCTTAT----TTGGCCGGTCC......................................................................................1811.001010000
...................................................................................................................TCTCACATCTCCATATTCAA..................................................................2011.001000100
.....................................................................................................................TCACATCTCCATATTCAC..................................................................1811.001100000
...................................................................................................................TCTCACATCTCCATATTCACAGTG..............................................................2411.001010000
.......................................................................TGAGTATAGTGGATGTGGT...............................................................................................................1911.001000010
..................................................................................................................CTCTCACATCTCCATATTCACAGA...............................................................2411.001010000
...................................................................................................................TCTCACATCTCCATATTC....................................................................1811.001100000
......................................................................GTGAGTATAGTGGATGTGGGTGGC...........................................................................................................2411.001000001
...................................................................................................................TCTCACATCTCCATATTCACATAA..............................................................2411.001001000
........................................................................................................................CATCTCCATATTCACAGT...............................................................1811.001100000
...............................AGACGAGATGCGCGAACTGGC.....................................................................................................................................................2111.001010000
......................................................................GTGAGTATAGTGGATGTGGGTGGG...........................................................................................................2411.001100000
...................................................................................................................TCTCACATCTCCATATTCACAAA...............................................................2311.001100000
.................................................................................................................................................AGCTGCGCCACAAGTATGGTAC..................................2211.001100000
...................................................................................................................TCTCACATCTCCATATTCACAAC...............................................................2311.001010000
......................................................................GTGAGTATAGTGGATGTGGGTT.............................................................................................................2211.001100000
.......................................................................TGAGTATAGTGGATGTGGGTA.............................................................................................................2111.001100000
...................................................................................................................TCTCACATCTCCATATTCACATT...............................................................2311.001001000
....................................................................................................................................................................................AAACTTTCTGGAAGTGAGGC.2011.001000100
...................................................................................................................TCTCACATCTCCATATTCG...................................................................1911.001100000
droBip1
AGCGGGAGCGACAGCAGCAGCAGGAGCGCGAAGACGAGATGCGTGAACTGGCGCTAAAGTTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTAAA---TATGGCCAGTCCTCTCACATCTCCATATTCACAGGCGTCGCGAGCTGCGCCACAAGTATGGCACGCCCTCCAGCGGCAAACTGTCTGGAAGTGAGGCTSizeHit CountTotal NormTotal
No Reads
dp5
AGCGAGAGCGTCAACAGCAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTTG--------GTCAGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGGCACAAGTACGGCACGCCCTCCAGTGGCAAGCTGTCGGGCAGTGATGGGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................TCTCACATCTCTATATTCACAG................................................................2212900.00290001890243344252118202841
...................................................................................................................TCTCACATCTCTATATTCACA.................................................................2111024.00102426436169142945332
...................................................................................................................TCTCACATCTCTATATTCACAGT...............................................................231402.00402011949104814529011
......................................................................GTGGGTATCGTGCTTGTGGGTGG............................................................................................................231223.002230811672914264244
....................................................................................................................CTCACATCTCTATATTCACAG................................................................211155.00155015210110000
...................................................................................................................TCTCACATCTCTATATTCACAC................................................................221117.001170732911211000
...................................................................................................................TCTCACATCTCTATATTCAC..................................................................201115.001150711220480000
....................................................................................................................CTCACATCTCTATATTCACA.................................................................20172.007207010010000
...................................................................................................................TCTCACATCTCTATATTCACAGA...............................................................23169.006904498321110
...................................................................................................................TCTCACATCTCTATATTCACACC...............................................................23137.003702098000000
...................................................................................................................TCTCACATCTCTATATTCACAGC...............................................................23133.003302218200000
...................................................................................................................TCTCACATCTCTATATTCACAA................................................................22116.001601220110000
......................................................................GTGGGTATCGTGCTTGTGGGTG.............................................................................................................22116.001601021300000
.....................................................................................................................TCACATCTCTATATTCACAG................................................................20115.001501100030010
......................................................................GTGGGTATCGTGCTTGTGGGT..............................................................................................................21115.00150410123031
......................................................................GTGGGTATCGTGCTTGTGGG...............................................................................................................20111.00110620111000
...................................................................................................................TCTCACATCTCTATATTCACAGTT..............................................................24110.00100700200010
......................................................................................................................CACATCTCTATATTCACAG................................................................1919.0090700200000
....................................................................................................................CTCACATCTCTATATTCACAC................................................................2119.0090900000000
....................................................................................................................CTCACATCTCTATATTCACAGT...............................................................2219.0090700001001
......................................................................GTGGGTATCGTGCTTGTGGGTGGC...........................................................................................................2419.0090510102000
......................................................................GTGGGTATCGTGCTTGTGG................................................................................................................1919.0090600003000
...................................................................................................................TCTCACATCTCTATATTCA...................................................................1918.0080210121001
......................................................................GTGGGTATCGTGCTTGTGGGTGGT...........................................................................................................2417.0070200101003
...................................................................................................................TCTCACATCTCTATATTCACACT...............................................................2316.0060410100000
...................................................................................................................TCTCACATCTCTATATTCACACA...............................................................2316.0060510000000
...................................................................................................................TCTCACATCTCTATATTCACACCA..............................................................2416.0060501000000
.......................................................................................................................ACATCTCTATATTCACAG................................................................1815.0050400100000
...................................................................................................................TCTCACATCTCTATATTCACAGTA..............................................................2414.0040400000000
...................................................................................................................TCTCACATCTCTATATTCACAGG...............................................................2314.0040211000000
......................................................................GTGGGTATCGTGCTTGTGGT...............................................................................................................2014.0040200002000
.......................................................................TGGGTATCGTGCTTGTGGGTGG............................................................................................................2214.0040310000000
..................................................................................................................CTCTCACATCTCTATATTCACA.................................................................2213.0030101100000
.....................................................................................................................TCACATCTCTATATTCACA.................................................................1913.0030000020001
....................................................................................................................CTCACATCTCTATATTCACAGA...............................................................2213.0030300000000
..................................................................................................................CTCTCACATCTCTATATTCACAG................................................................2313.0030110100000
....................................................................................................................CTCACATCTCTATATTCACAGAAA.............................................................2412.0020200000000
......................................................................GTGGGTATCGTGCTTGTG.................................................................................................................1812.0020100100000
.....................................................................................................................TCACATCTCTATATTCACAGTT..............................................................2212.0020000000020
....................................................................................................................CTCACATCTCTATATTCACACC...............................................................2212.0020200000000
....................................................................................................................CTCACATCTCTATATTCAC..................................................................1912.0020200000000
........................................................................GGGTATCGTGCTTGTGGGTGG............................................................................................................2112.0020110000000
...................................................................................................................TCTCACATCTCTATATTCACAGAA..............................................................2412.0020100000010
...................................................................................................................TCTCACATCTCTATATTCACT.................................................................2111.0010000100000
...................................................................................................................TCTCACATCTCTATATTCACAGCGA.............................................................2511.0010010000000
.....................................................................................................................TCACATCTCTATATTCACAA................................................................2011.0010100000000
......................................................................GTGGGTATCGTGCTTGTGGGTGGTA..........................................................................................................2511.0010000100000
....................................................................................................................CTCACATCTCTATATTCACAT................................................................2111.0010100000000
..................................................................................................................CTCTCACATCTCTATATTCACAGC...............................................................2411.0010010000000
..................................................................................................................CTCTCACATCTCTATATTCACAGA...............................................................2411.0010010000000
......................................................................GTGGGTATCGTGCTTGTGT................................................................................................................1911.0010000010000
..................................................................................................................CTCTCACATCTCTATATTCACAGT...............................................................2411.0010100000000
......................................................................GTGGGTATCGTGCTTGTGGGTGGCTCT........................................................................................................2711.0010000010000
........................................................................GGGTATCGTGCTTGTGGGTGGC...........................................................................................................2211.0010100000000
...................................................................................................................TCTCACATCTCTATATTCACCT................................................................2211.0010000100000
....................................................................................................................CTCACATCTCTATATTCACACCA..............................................................2311.0010100000000
.................................................................................................................CCTCTCACATCTCTATATTCACAGT...............................................................2511.0010100000000
...................................................................................................................TCTCACATCTCTATATTC....................................................................1811.0010100000000
........................................................................................................................CATCTCTATATTCACAGT...............................................................1811.0010100000000
...................................................................................................................TCTCACATCTCTATATTCACATT...............................................................2311.0010000100000
...................................................................................................................TCTCACATCTCTATATTCACAGCTT.............................................................2511.0010100000000
......................................................................................................................CACATCTCTATATTCACACC...............................................................2011.0010010000000
......................................................................GTGGGTATCGTGCTTGTGGGTGGCTC.........................................................................................................2611.0010000001000
......................................................................GTGGGTATCGTGCTTGTGGGTGGA...........................................................................................................2411.0010000010000
......................................................................GTGGGTATCGTGCTTGTGGGTGGCT..........................................................................................................2511.0010100000000
.............................GAGGATGAGATGCGCGAACT........................................................................................................................................................2011.0010100000000
...................................................................................................................TCTCACATCTCTATATTCACAGAAA.............................................................2511.0010100000000
.......................................................................TGGGTATCGTGCTTGTGGGTGGA...........................................................................................................2311.0010000000001
.......................................................................................................................ACATCTCTATATTCACAGA...............................................................1911.0010100000000
.......................................................................TGGGTATCGTGCTTGTGGGT..............................................................................................................2011.0010100000000
....................................................................................................................CTCACATCTCTATATTCACAGTA..............................................................2311.0010100000000
.....................................................................................................................TCACATCTCTATATTCACAGT...............................................................2111.0010100000000
......................................................................GTGGGTATCGTGCTTGTGTA...............................................................................................................2011.0010100000000
droPer2
AGCGAGAGCGTCAACAGCAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTTG--------GTCAGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGACACAAGTACGGCACGCCCTCCAGTGGCAAGCTGTCGGGCAGCGATGGGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................TCTCACATCTCTATATTCACAG................................................................2211166.0011662145201072141092
...................................................................................................................TCTCACATCTCTATATTCACA.................................................................211339.0033951774973350
...................................................................................................................TCTCACATCTCTATATTCACAGT...............................................................231280.002808479981162
......................................................................GTGGGTATCGTGCTTGTGGGTGG............................................................................................................231113.001133312151169
...................................................................................................................TCTCACATCTCTATATTCACAC................................................................22157.00575482200
....................................................................................................................CTCACATCTCTATATTCACAG................................................................21135.00350350000
...................................................................................................................TCTCACATCTCTATATTCAC..................................................................20131.003101415110
...................................................................................................................TCTCACATCTCTATATTCACACC...............................................................23124.00241761000
...................................................................................................................TCTCACATCTCTATATTCACAGA...............................................................23121.00212142120
....................................................................................................................CTCACATCTCTATATTCACA.................................................................20121.00210200100
......................................................................GTGGGTATCGTGCTTGTGGGT..............................................................................................................21120.00200103313
......................................................................GTGGGTATCGTGCTTGTGGG...............................................................................................................20120.00200101315
......................................................................GTGGGTATCGTGCTTGTGGGTG.............................................................................................................2219.009033003
...................................................................................................................TCTCACATCTCTATATTCA...................................................................1916.006020130
...................................................................................................................TCTCACATCTCTATATTCACAGTT..............................................................2416.006011130
.....................................................................................................................TCACATCTCTATATTCACAG................................................................2016.006040110
......................................................................GTGGGTATCGTGCTTGTGG................................................................................................................1915.005000014
......................................................................GTGGGTATCGTGCTTGTGGT...............................................................................................................2015.005000104
......................................................................GTGGGTATCGTGCTTGTGGGTGGC...........................................................................................................2414.004000004
......................................................................GTGGGTATCGTGCTTGTGGGTGGT...........................................................................................................2414.004001003
...................................................................................................................TCTCACATCTCTATATTCACAT................................................................2214.004020110
....................................................................................................................CTCACATCTCTATATTCAC..................................................................1914.004040000
..................................................................................................................CTCTCACATCTCTATATTCACA.................................................................2213.003012000
....................................................................................................................CTCACATCTCTATATTCACAC................................................................2113.003030000
.....................................................................................................................TCACATCTCTATATTCACA.................................................................1913.003001110
......................................................................GTGGGTATCGTGCTTGTGGGTGGCT..........................................................................................................2512.002000002
...................................................................................................................TCTCACATCTCTATATTCACAGG...............................................................2312.002020000
......................................................................GTGGGTATCGTGCTTGTG.................................................................................................................1812.002010010
......................................................................GTGGGTATCGTGCTTGTGTT...............................................................................................................2012.002000002
...................................................................................................................TCTCACATCTCTATATTCACACT...............................................................2312.002000110
......................................................................................................................CACATCTCTATATTCACA.................................................................1812.002020000
...................................................................................................................TCTCACATCTCTATATTCACAGTAA.............................................................2512.002020000
........................................................................................................................CATCTCTATATTCACAGT...............................................................1812.002011000
..................................................................................................................CTCTCACATCTCTATATTCACAG................................................................2312.002020000
......................................................................GTGGGTATCGTGCTTGTGGGTT.............................................................................................................2212.002000002
....................................................................................................................CTCACATCTCTATATTCACAGT...............................................................2212.002020000
.......................................................................TGGGTATCGTGCTTGTGGGTGG............................................................................................................2212.002010001
....................................................................................................................CTCACATCTCTATATTCACACC...............................................................2212.002020000
...................................................................................................................TCTCACATCTCTATATTCACAGC...............................................................2312.002001100
...................................................................................................................TCTCACATCTCTATATTCACAGTA..............................................................2411.001010000
....................................................................................................................CTCACATCTCTATATTCACAGGTA.............................................................2411.001010000
...................................................................................................................TCTCACATCTCTATATTCACACTA..............................................................2411.001010000
.....................................................................................................................TCACATCTCTATATTCACAGT...............................................................2111.001000100
...................................................................................................................TCTCACATCTCTATATTCACACA...............................................................2311.001010000
...................................................................................................................TCTCACATCTCTATATTCACAGGTA.............................................................2511.001010000
...................................................................................................................TCTCACATCTCTATATTCACACCA..............................................................2411.001010000
.......................................................................TGGGTATCGTGCTTGTGGGT..............................................................................................................2011.001000001
.....................................................................................................................TCACATCTCTATATTCAC..................................................................1811.001010000
...................................................................................................................TCTCACATCTCTATATTCACCTT...............................................................2311.001000010
...................................................................................................................TCTCACATCTCTATATTCACAA................................................................2211.001010000
...................................................................................................................TCTCACATCTCTATATTCACATT...............................................................2311.001010000
......................................................................GTGGGTATCGTGCTTGTGGC...............................................................................................................2011.001000010
.................................................................................................................................................................................GGCAAGCTGTCGGGCAGC......1811.001100000
......................................................................GTGGGTATCGTGCTTGTGGGTGGCTCT........................................................................................................2711.001010000
......................................................................GTGGGTATCGTGCTTGTGGGG..............................................................................................................2111.001000001
.......................................................................................................................ACATCTCTATATTCACAG................................................................1811.001010000
...........................................................................TATCGTGCTTGTGGGTGGT...........................................................................................................1911.001001000
droWil2
AACGAGAGCGACAACAGCAACAGGAGCGTGAAGATGAGATGAGAGAATTGGCGCTAAAGTTGCGCCGTAGGTGAGTATC-GGGTTGTGATTGGCTCCTT-----GT-GGTAGTCCTCTCACATCTCTATATTCACAGGCGTCGCGAGCTGCGTCACAAATATGGAACACCCTCTAGTGGTAAATTGTCGGACAGTGAGGGASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................................................TCTCACATCTCTATATTCACAG................................................................22110655.001065536474073818981029
...................................................................................................................TCTCACATCTCTATATTCACA.................................................................2112106.00210624211632293406
......................................................................GTGAGTATC-GGGTTGTGATTGG............................................................................................................221757.007578108134241266
...................................................................................................................TCTCACATCTCTATATTCACAGT...............................................................231584.00584751781022992
...................................................................................................................TCTCACATCTCTATATTCAC..................................................................201321.003218019801726
....................................................................................................................CTCACATCTCTATATTCACAG................................................................211316.003165304034
....................................................................................................................CTCACATCTCTATATTCACA.................................................................20195.0095094001
......................................................................GTGAGTATC-GGGTTGTGATTG.............................................................................................................21185.008547213914
...................................................................................................................TCTCACATCTCTATATTCACAC................................................................22164.00644317121
...................................................................................................................TCTCACATCTCTATATTCACAGA...............................................................23151.00511628142
...................................................................................................................TCTCACATCTCTATATTCACAA................................................................22145.0045231084
...................................................................................................................TCTCACATCTCTATATTCA...................................................................19134.00341260412
.....................................................................................................................TCACATCTCTATATTCACAG................................................................20125.0025219022
....................................................................................................................CTCACATCTCTATATTCACAGT...............................................................22121.0021118200
....................................................................................................................CTCACATCTCTATATTCAC..................................................................19118.0018018000
...................................................................................................................TCTCACATCTCTATATTCACAGG...............................................................23115.001596000
...................................................................................................................TCTCACATCTCTATATTCACAGC...............................................................23112.001282020
.......................................................................TGAGTATC-GGGTTGTGATTGG............................................................................................................21110.001008101
..................................................................................................................CTCTCACATCTCTATATTCACAG................................................................2319.00907020
......................................................................GTGAGTATC-GGGTTGTGATTGGT...........................................................................................................2319.00901332
...................................................................................................................TCTCACATCTCTATATTCACAT................................................................2217.00712040
......................................................................................................................CACATCTCTATATTCACAG................................................................1917.00707000
......................................................................GTGAGTATC-GGGTTGTGATT..............................................................................................................2016.00612120
.......................................................................................................................ACATCTCTATATTCACAG................................................................1816.00606000
..................................................................................................................CTCTCACATCTCTATATTCACA.................................................................2215.00503020
....................................................................................................................CTCACATCTCTATATTCACAGA...............................................................2215.00505000
.....................................................................................................................TCACATCTCTATATTCACA.................................................................1915.00504001
...................................................................................................................TCTCACATCTCTATATTCACAAA...............................................................2314.00404000
...................................................................................................................TCTCACATCTCTATATTCACAGAA..............................................................2414.00421010
...................................................................................................................TCTCACATCTCTATATTCACAGTA..............................................................2414.00402020
...................................................................................................................TCTCACATCTCTATATTCACAGTT..............................................................2414.00401003
......................................................................GTGAGTATC-GGGTTGTGATTGGA...........................................................................................................2313.00301200
...................................................................................................................TCTCACATCTCTATATTCACACC...............................................................2313.00321000
......................................................................................................................CACATCTCTATATTCACA.................................................................1813.00303000
...................................................................................................................TCTCACATCTCTATATTCAA..................................................................2012.00202000
....................................................................................................................CTCACATCTCTATATTCACAA................................................................2112.00202000
...................................................................................................................TCTCACATCTCTATATTC....................................................................1812.00202000
......................................................................GTGAGTATC-GGGTTGTGATTT.............................................................................................................2112.00201010
...................................................................................................................TCTCACATCTCTATATTCACAGTAA.............................................................2512.00201010
...................................................................................................................TCTCACATCTCTATATTCACC.................................................................2112.00210001
...................................................................................................................TCTCACATCTCTATATTCACG.................................................................2112.00201010
...................................................................................................................TCTCACATCTCTATATTCACAAT...............................................................2312.00200002
...................................................................................................................TCTCACATCTCTATATTCACAGGGC.............................................................2512.00220000
...................................................................................................................TCTCACATCTCTATATTCACT.................................................................2112.00220000
......................................................................................................................CACATCTCTATATTCACAGT...............................................................2012.00202000
.....................................................................................................................TCACATCTCTATATTCAC..................................................................1811.00101000
....................................................................................................................CTCACATCTCTATATTCACAAA...............................................................2211.00101000
..........................................................................GTATC-GGGTTGTGATTGGC...........................................................................................................1911.00101000
..................................................................................................................CTCTCACATCTCTATATTC....................................................................1911.00101000
........................................................................................................................CATCTCTATATTCACAGT...............................................................1811.00101000
......................................................................GTGAGTATC-GGGTTGTGATTGA............................................................................................................2211.00100001
...................................................................................................................TCTCACATCTCTATATTCACAGTAC.............................................................2511.00101000
......................................................................GTGAGTATC-GGGTTGTGATTGGCTC.........................................................................................................2511.00100100
......................................................................GTGAGTATC-GGGTTGTGATTGGAA..........................................................................................................2411.00100100
...........................GTGAAGATGAGATGAGAGAATTGGCG....................................................................................................................................................2611.00100010
......................................................................GTGAGTATC-GGGTTGTGATTGGCT..........................................................................................................2411.00100100
......................................................................GTGAGTATC-GGGTTGTGA................................................................................................................1811.00100010
....................................................................................................................CTCACATCTCTATATTCACAGTT..............................................................2311.00101000
......................................................................GTGAGTATC-GGGTTGTGATTGGG...........................................................................................................2311.00100100
.......................................................................TGAGTATC-GGGTTGTGATTGGT...........................................................................................................2211.00100001
......................................................................GTGAGTATC-GGGTTGTGATTGGC...........................................................................................................2311.00100100
.....................................................................................................................TCACATCTCTATATTCACAC................................................................2011.00101000
...................................................................................................................TCTCACATCTCTATATTCACACT...............................................................2311.00101000
..................................................................................................................CTCTCACATCTCTATATTCA...................................................................2011.00101000
............................................................................ATC-GGGTTGTGATTGGCTC.........................................................................................................1911.00100010
...GAGAGCGACAACAGCAACAGGAGC..............................................................................................................................................................................2411.00100010
...................................................................................................................TCTCACATCTCTATATTCAT..................................................................2011.00101000
..CGAGAGCGACAACAGCAACAGGAGC..............................................................................................................................................................................2511.00100010
......................................................................................................................CACATCTCTATATTCACAC................................................................1911.00101000
........................................................................GAGTATC-GGGTTGTGATTGG............................................................................................................2011.00101000
...................................................................................................................TCTCACATCTCTATATTCACAGGC..............................................................2411.00100001
...................................................................................................................TCTCACATCTCTATATTCAAT.................................................................2111.00100010
....................................................................................................................CTCACATCTCTATATTCACAC................................................................2111.00101000
....................................................................................................................CTCACATCTCTATATTCA...................................................................1811.00101000
droVir3
AGAGAGAGCGTCAGTTGCAACAGGAACGCGAGGATGAGATGCGCGAGCTCGCGCTAAAGCTGCGTCGTAGGTGAGTAAT-CAGTTGTGGGTGGCTTTTT--------GAAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGTGAGTTGCGGCACAAATATGGAACGCCGTCCAGCGGCAAACTCTCCGACAGCGATGCGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................TCTCACATCTCTTTATTCACAG................................................................22167997.006799712476497928114551510140544723121743116342255026125456640536818831454205921643282275213403964114214895261085974635840231167415467111934283331691113138204380167413324228217209230322241067138518892119155118138205233
...................................................................................................................TCTCACATCTCTTTATTCACA.................................................................21111458.0011458663320039161320102014783532112729034018228333161303302453182535735013756931412617679207110347612204300152158141978537201962001445769784411169914134521384262
...................................................................................................................TCTCACATCTCTTTATTCACAGT...............................................................2314576.0045767927181633266058091124218548134042261095348296180142161244212201902445385672582802211870043001001452847331855255010514810181863834041425816271720
......................................................................GTGAGTAAT-CAGTTGTGGGTGG............................................................................................................2212028.002028111964167774114146190004002520001110055600022600490120762300000000000000000001097868302400200206031000
...................................................................................................................TCTCACATCTCTTTATTCAC..................................................................2011643.001643127454103200000012153823562673537231123243822686951831542773477600000010100000111131350004569142063101399
....................................................................................................................CTCACATCTCTTTATTCACAG................................................................2111209.00120900943200100000007210000033441014125597040421000000000010000000000010813201065622100010
....................................................................................................................CTCACATCTCTTTATTCACAGT...............................................................221565.005650144313210020014212422511032221593031221771835361312160000000001101111200057071111138392627202900002
...................................................................................................................TCTCACATCTCTTTATTCACAGA...............................................................231493.00493016691000000000621421130237972727234390731090111012222203989742213101039231239872154213414
...................................................................................................................TCTCACATCTCTTTATTCACAA................................................................221429.0042900117100000000102100011100198221212171328220188326230000000010000010010010017138114010100141611
....................................................................................................................CTCACATCTCTTTATTCACA.................................................................201356.00356003331000000000022012102002211220200000000000000000000000000000000000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTG.............................................................................................................211304.0030473494171925001673112000000000000990079060030151000000000000000000002172900000100831011010
...................................................................................................................TCTCACATCTCTTTATTCA...................................................................191195.0019503810000000000191373610714341113211562320206111000000000000000000113000400000202000000
.....................................................................................................................TCACATCTCTTTATTCACAG................................................................201165.00165006102010000000530400051102424422322011240000000000000000001010063200012011100010
...................................................................................................................TCTCACATCTCTTTATTCACC.................................................................211145.001458747002000000006302311530030117571401000001000000000000010000001000100000020000111
...................................................................................................................TCTCACATCTCTTTATTCACAT................................................................221145.0014500800000000100212361381118581361421223010221000000000000000000031000201000002100000
...................................................................................................................TCTCACATCTCTTTATTCACAC................................................................221140.0014011428400000000000000100020321031465930121300000000000000010000100002941221002100110
...................................................................................................................TCTCACATCTCTTTATTCACAGTT..............................................................241131.00131001411110000010621412342642127951612100052000000000010000000001207810120000010000
..................................................................................................................CTCTCACATCTCTTTATTCACAG................................................................231112.001120035000000000003011000100120838611540510400000000000000000000000000300100000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTGGT...........................................................................................................231103.0010300313430012120000000000010002100010300009100000000000000000001513100000000000000000
......................................................................................................................CACATCTCTTTATTCACAG................................................................19183.0083003800000000000000100001021210001100001000000000000000000000000003300000001000000
....................................................................................................................CTCACATCTCTTTATTCACAGA...............................................................22167.0067101210100000000310000000011352002100000000000000011100100003100051010110110210110
...................................................................................................................TCTCACATCTCTTTATTCACAGTAA.............................................................25162.006200400000000000000000000152430000702311400000000000000000000000006221100000011002
...................................................................................................................TCTCACATCTCTTTATTCACAGTA..............................................................24158.00580060000000000000000000003432630020112200000010000000000000001000310021130500032
......................................................................GTGAGTAAT-CAGTTGTGGGTGT............................................................................................................22156.005600302220001105000000000000210000010010310000000000000000000511800000300000010201
.....................................................................................................................TCACATCTCTTTATTCACA.................................................................19151.005100280000000000031012401201000000200200100000000000000000000001000200000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGAA..............................................................24150.00500010000000000010000001002430131421022100000000000000000000000005312003112000021
.......................................................................TGAGTAAT-CAGTTGTGGGTGG............................................................................................................21149.004900191010104400300000000000010000002000000000000000000000000010300000300000011103
...................................................................................................................TCTCACATCTCTTTATTCACAAA...............................................................23142.004200120000000000000000000012200054300104100000000000000000000000004100000000011000
....................................................................................................................CTCACATCTCTTTATTCAC..................................................................19140.004000380000000000000001000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................ACATCTCTTTATTCACAG................................................................18137.003700150010000000000000000100040021100120100000000000000000000000000800000000000000
....................................................................................................................CTCACATCTCTTTATTCACAGTT..............................................................23131.00310030200000000010100201012023120100000011000000010000000000001000300001000100000
......................................................................GTGAGTAAT-CAGTTGTGGGT..............................................................................................................20129.00290061130000100200000000000010000000001011000000000000000000011600000000100020000
..................................................................................................................CTCTCACATCTCTTTATTCACA.................................................................22128.00280090000000000011000001100212141200000000000000000000000000002000000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTGGA...........................................................................................................23124.00240020000001700000100000000010000001000000000000000000000000020900000000000000000
...................................................................................................................TCTCACATCTCTTTATTC....................................................................18123.00230610000000000000210100100000122300110000000000000000000001000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCAA..................................................................20123.00230090000000000000000001002020010100201100000000000000000000000000210000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTGGC...........................................................................................................23122.002200010000021000000000000000000000000000000000000000000000000411300000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGC...............................................................23122.00220032200000000000000000001222100212000001100000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGAAA.............................................................25118.00180020000000000000000000002111000020002100000000000000000000000003011001000000000
......................................................................................................................CACATCTCTTTATTCACA.................................................................18118.001800130000000000020000000001000010100000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGG...............................................................23117.00170080100000000000000000000100010000000001000000000000000000000002000000011100000
.....................................................................................................................TCACATCTCTTTATTCACAGT...............................................................21116.00160060100000000000001010021000010001000020000000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACATT...............................................................23116.00160000010010000021020002040000000002000001000000000000000000000000000000000000000
....................................................................................................................CTCACATCTCTTTATTCACAA................................................................21115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTGA............................................................................................................22113.00130010001001000000000000000001000000000000000000000000000000021600000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGG...............................................................................................................19112.00120120010000000000010010000000000000001010000000000000000000010100000000100010000
...................................................................................................................TCTCACATCTCTTTATTCACACA...............................................................23111.00110010000000000000000000001101010010110000000000000000000000000002000100000000000
...................................................................................................................TCTCACATCTCTTTATTCACAAAA..............................................................24111.00110020000000000000000000000111011110101000000000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGTTA.............................................................25111.00110000000000000000000000001111000000120000000000000000000000000000010100200000000
...................................................................................................................TCTCACATCTCTTTATTCAG..................................................................2018.0080010000000000010000000001010011100000100000000000000000000000000000000000000000
....................................................................................................................CTCACATCTCTTTATTCACC.................................................................2018.0080080000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTT.............................................................................................................2118.0080011000000010000000000000001000101000000000000000000000000000200000000000000000
.......................................................................TGAGTAAT-CAGTTGTGGGTGGA...........................................................................................................2218.0080000001000000000000000000000000000000000000000000000000000001500000000000001000
...................................................................................................................TCTCACATCTCTTTATTCACACC...............................................................2317.0070010000000000000000000001000100000000000000000000000000000000000001011000000100
......................................................................GTGAGTAAT-CAGTTGTGGGTGGTC..........................................................................................................2416.0060000000001000000000000000000000001000000000000000000000000000400000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACT.................................................................2116.0060110000000000000000010101000000000100000000000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACG.................................................................2116.0060100000000000001000001000000000200001000000000000000000000000000000000000000000
....................................................................................................................CTCACATCTCTTTATTCACAGTA..............................................................2315.0050010000000000000001000000001000010000000000000000000000000000000000000000100000
.......................................................................TGAGTAAT-CAGTTGTGGGTGGT...........................................................................................................2215.0050000000002100000000000000000000000000000000000000000000000000200000000000000000
........................................................................................................................CATCTCTTTATTCACAGT...............................................................1815.0050030000000000000000000010000000000000100000000000000000000000000000000000000000
.......................................................................TGAGTAAT-CAGTTGTGGGTG.............................................................................................................2015.0050040000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................CTCACATCTCTTTATTCACACC...............................................................2214.0040020000000000000000000000000000000000000200000000000000000000000000000000000000
..................................................................................................................CTCTCACATCTCTTTATTCACAGT...............................................................2414.0040010000000000000000000000000010100001000000000000000000000000000000000000000000
..................................................................................................................CTCTCACATCTCTTTATTCAC..................................................................2114.0040020000000000000110000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTCACATCTCTTTATTCACAGC...............................................................2214.0040001000000000000000000000000000100000000000000000000000000000001000010000000000
....................................................................................................................CTCACATCTCTTTATTCACAC................................................................2114.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGTTC.............................................................2514.0040000000000000000000000000000102100000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGTG..............................................................2413.0030010000000000000000000000000000000000000000000000000000000000001000000000000001
.................................................................................................................CCTCTCACATCTCTTTATTCACAG................................................................2413.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TCACATCTCTTTATTCACAA................................................................2013.0030020000000000000000000000000000001000000000000000000000000000000000000000000000
........................................................................GAGTAAT-CAGTTGTGGGTGG............................................................................................................2013.0030021000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGTTT.............................................................2513.0030010000000000000000000000000000100000000000000000000000000000000000000000010000
......................................................................................................................CACATCTCTTTATTCACAA................................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTGC............................................................................................................2213.0030001000001000000000000000000000000000000000000000000000000010000000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACACT...............................................................2323.0060000000000000000000000001000100000000000000000000010000000000000000100020000000
...................................................................................................................TCTCACATCTCTTTATTCACCC................................................................2213.0030020000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................GTGAGTAAT-CAGTTGTGG................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000001000000000100000100
...................................................................................................................TCTCACATCTCTTTATTCACAGGT..............................................................2413.0030010000000000000000000000000001000000000000000000000000000000000000000100000000
...................................................................................................................TCTCACATCTCTTTATTCAGT.................................................................2113.0030000000000000000000000000001000000010001000000000000000000000000000000000000000
....................................................................................................................CTCACATCTCTTTATTCACAGAAA.............................................................2412.0020001000000000000000000000000000000000000000000000000000000000001000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTC.............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000200000000000000000
....................................................................................................................CTCACATCTCTTTATTCACAGAA..............................................................2312.0020010000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................ACATCTCTTTATTCACAGT...............................................................1912.0020000100000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................GTGAGTAAT-CAGTTGTGGGTGTA...........................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000010100000000000000000
...................................................................................................................TCTCACATCTCTTTATTCACAGGCCCG...........................................................2712.0020000000000000000000000000000010000000010000000000000000000000000000000000000000
.....................................................................................................................TCACATCTCTTTATTCACAT................................................................2012.0020000000000000001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTCACATCTCTTTATTCACATT...............................................................2212.0020000000000000000000010010000000000000000000000000000000000000000000000000000000
droMoj3
AGAGGGAGCGACAACTGCAGCAGGAGCGCGAGGACGAGATGCGCGAGCTGGCGCTCAAGCTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTCTAG--------TGAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGAGAGTTGCGCCACAAGTACGGCACGCCGTCCAGTGGCAAGCTCTCCGACAGCGACGTTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................TCTCACATCTCTTTATTCACAG................................................................22119883.001988314055623282325455642
...................................................................................................................TCTCACATCTCTTTATTCACA.................................................................2117296.00729648303736783192320
...................................................................................................................TCTCACATCTCTTTATTCAC..................................................................2011753.0017538034917178670
...................................................................................................................TCTCACATCTCTTTATTCACAGT...............................................................2311519.001519549419513464159
......................................................................GTGAGTAAT-CAGTTGTGGGTGG............................................................................................................2211455.0014551122442349301726
....................................................................................................................CTCACATCTCTTTATTCACAG................................................................2111218.0012181183122291
....................................................................................................................CTCACATCTCTTTATTCACA.................................................................201452.00452437000150
...................................................................................................................TCTCACATCTCTTTATTCACAA................................................................221231.00231195200340
...................................................................................................................TCTCACATCTCTTTATTCACAC................................................................221209.00209535021490
....................................................................................................................CTCACATCTCTTTATTCACAGT...............................................................221185.0018574749856
......................................................................GTGAGTAAT-CAGTTGTGGGTG.............................................................................................................211179.001793428845649
...................................................................................................................TCTCACATCTCTTTATTCACAGA...............................................................231179.0017979101980
...................................................................................................................TCTCACATCTCTTTATTCACAGC...............................................................231168.00168223031400
......................................................................GTGAGTAAT-CAGTTGTGGGTGGT...........................................................................................................231145.0014589244118
.....................................................................................................................TCACATCTCTTTATTCACAG................................................................20199.009974423160
......................................................................GTGAGTAAT-CAGTTGTGGGTGT............................................................................................................22187.0087313331649
....................................................................................................................CTCACATCTCTTTATTCAC..................................................................19172.00726700050
..................................................................................................................CTCTCACATCTCTTTATTCACAG................................................................23168.006837110290
...................................................................................................................TCTCACATCTCTTTATTCACAGTT..............................................................24155.005519294210
...................................................................................................................TCTCACATCTCTTTATTCA...................................................................19148.00488737230
....................................................................................................................CTCACATCTCTTTATTCACAGA...............................................................22146.004618100270
......................................................................GTGAGTAAT-CAGTTGTGGGTGGC...........................................................................................................23136.00362200725
...................................................................................................................TCTCACATCTCTTTATTCACC.................................................................21133.00332801040
......................................................................................................................CACATCTCTTTATTCACAG................................................................19132.00322411060
.....................................................................................................................TCACATCTCTTTATTCACA.................................................................19131.00312140060
..................................................................................................................CTCTCACATCTCTTTATTCACA.................................................................22129.002915000140
...................................................................................................................TCTCACATCTCTTTATTCAA..................................................................20126.00262410010
...................................................................................................................TCTCACATCTCTTTATTCACAGTA..............................................................24126.00266000200
......................................................................GTGAGTAAT-CAGTTGTGGGT..............................................................................................................20126.00263011120
...................................................................................................................TCTCACATCTCTTTATTCACG.................................................................21122.00220000220
...................................................................................................................TCTCACATCTCTTTATTCACAT................................................................22121.0021625350
....................................................................................................................CTCACATCTCTTTATTCACAGC...............................................................22120.00205000150
...................................................................................................................TCTCACATCTCTTTATTCACAGTAA.............................................................25120.00201400060
.......................................................................TGAGTAAT-CAGTTGTGGGTGG............................................................................................................21119.00191520101
......................................................................GTGAGTAAT-CAGTTGTGGGTGGA...........................................................................................................23118.00181001115
....................................................................................................................CTCACATCTCTTTATTCACAA................................................................21115.00151500000
.......................................................................................................................ACATCTCTTTATTCACAG................................................................18113.0013800050
......................................................................................................................CACATCTCTTTATTCACA.................................................................18112.0012410070
...................................................................................................................TCTCACATCTCTTTATTCACAGG...............................................................23111.0011800030
......................................................................GTGAGTAAT-CAGTTGTGGG...............................................................................................................19110.0010200053
....................................................................................................................CTCACATCTCTTTATTCACAGTT..............................................................23110.0010202150
.....................................................................................................................TCACATCTCTTTATTCAC..................................................................1819.009600030
...................................................................................................................TCTCACATCTCTTTATTCACAAA...............................................................2319.009900000
.......................................................................TGAGTAAT-CAGTTGTGGGTGGT...........................................................................................................2219.009110007
......................................................................GTGAGTAAT-CAGTTGTGGGTT.............................................................................................................2118.008030005
......................................................................GTGAGTAAT-CAGTTGTGGGTGGTC..........................................................................................................2418.008000008
......................................................................GTGAGTAAT-CAGTTGTGGGTGC............................................................................................................2217.007000142
...................................................................................................................TCTCACATCTCTTTATTCACACC...............................................................2317.007000070
......................................................................GTGAGTAAT-CAGTTGTGGGTGA............................................................................................................2217.007000034
...................................................................................................................TCTCACATCTCTTTATTCACACT...............................................................2316.006300030
...................................................................................................................TCTCACATCTCTTTATTCACAGAA..............................................................2416.006400020
.....................................................................................................................TCACATCTCTTTATTCACAGT...............................................................2116.006100230
......................................................................................................................CACATCTCTTTATTCACAGT...............................................................2016.006200040
..................................................................................................................CTCTCACATCTCTTTATTCAC..................................................................2115.005100040
....................................................................................................................CTCACATCTCTTTATTCACAAA...............................................................2214.004300010
.......................................................................TGAGTAAT-CAGTTGTGGGTGGA...........................................................................................................2214.004020002
.......................................................................................................................ACATCTCTTTATTCACAGT...............................................................1914.004100120
...................................................................................................................TCTCACATCTCTTTATTC....................................................................1814.004300010
......................................................................GTGAGTAAT-CAGTTGTGGGTGTA...........................................................................................................2314.004030010
....................................................................................................................CTCACATCTCTTTATTCACC.................................................................2014.004400000
......................................................................GTGAGTAAT-CAGTTGTGGGTGGCT..........................................................................................................2414.004110002
...................................................................................................................TCTCACATCTCTTTATTCACAAAA..............................................................2413.003300000
..................................................................................................................CTCTCACATCTCTTTATTCACAGT...............................................................2413.003200010
........................................................................GAGTAAT-CAGTTGTGGGTGG............................................................................................................2013.003100011
..................................................................................................................CTCTCACATCTCTTTATTCACAGA...............................................................2413.003000030
...................................................................................................................TCTCACATCTCTTTATTCACATT...............................................................2313.003001110
......................................................................GTGAGTAAT-CAGTTGTGGGTGGTA..........................................................................................................2413.003020100
...................................................................................................................TCTCACATCTCTTTATTCACT.................................................................2113.003001020
....................................................................................................................CTCACATCTCTTTATTCACAC................................................................2113.003200010
......................................................................GTGAGTAAT-CAGTTGTGGGTGTT...........................................................................................................2312.002010001
...................................................................................................................TCTCACATCTCTTTATTCACACA...............................................................2312.002100010
........................................................................................................................CATCTCTTTATTCACAGC...............................................................1812.002000020
....................................................................................................................CTCACATCTCTTTATTCAA..................................................................1922.004400000
...................................................................................................................TCTCACATCTCTTTATTCACAGTTA.............................................................2512.002100010
.......................................................................TGAGTAAT-CAGTTGTGGGTGT............................................................................................................2112.002000011
.......................................................................TGAGTAAT-CAGTTGTGGGTGGC...........................................................................................................2212.002010010
.....................................................................................................................TCACATCTCTTTATTCACAGA...............................................................2112.002110000
...................................................................................................................TCTCACATCTCTTTATTCACGC................................................................2212.002100010
........................................................................................................................CATCTCTTTATTCACAGT...............................................................1812.002000020
......................................................................GTGAGTAAT-CAGTTGTGGGTTT............................................................................................................2212.002000002
droGri2
AACGGGAGCGTCAGCTGCAGCAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAATTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTTTTGTTCTTAGGGAAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGCGAATTGCGCCACAAATATGGAACGCCCTCCAGTGGCAAACTCTCCGACAGCGATGTGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................TCTCACATCTCTTTATTCACAG................................................................221699.006996954
...................................................................................................................TCTCACATCTCTTTATTCACA.................................................................211469.004694672
......................................................................GTGAGTAAT-CAGTTGTGGGTGG............................................................................................................221105.001052877
...................................................................................................................TCTCACATCTCTTTATTCAC..................................................................20185.0085850
....................................................................................................................CTCACATCTCTTTATTCACAG................................................................21167.0067661
....................................................................................................................CTCACATCTCTTTATTCACA.................................................................20144.0044440
...................................................................................................................TCTCACATCTCTTTATTCACAGT...............................................................23132.0032302
...................................................................................................................TCTCACATCTCTTTATTCA...................................................................19112.0012120
...................................................................................................................TCTCACATCTCTTTATTCACAC................................................................22111.0011110
....................................................................................................................CTCACATCTCTTTATTCAC..................................................................1918.00880
....................................................................................................................CTCACATCTCTTTATTCACAGT...............................................................2216.00651
......................................................................GTGAGTAAT-CAGTTGTGGGTG.............................................................................................................2116.00642
.....................................................................................................................TCACATCTCTTTATTCACAG................................................................2016.00660
......................................................................GTGAGTAAT-CAGTTGTGGGT..............................................................................................................2014.00413
.....................................................................................................................TCACATCTCTTTATTCACA.................................................................1914.00440
....................................................................................................................CTCACATCTCTTTATTCACAGTT..............................................................2314.00440
......................................................................GTGAGTAAT-CAGTTGTGGGTGT............................................................................................................2213.00303
......................................................................GTGAGTAAT-CAGTTGTGGGTT.............................................................................................................2113.00321
......................................................................GTGAGTAAT-CAGTTGTGGGTGGC...........................................................................................................2313.00312
.......................................................................TGAGTAAT-CAGTTGTGGGTGG............................................................................................................2112.00211
....................................................................................................................CTCACATCTCTTTATTCACAGA...............................................................2212.00220
.......................................................................................................................ACATCTCTTTATTCACAG................................................................1812.00220
......................................................................GTGAGTAAT-CAGTTGTGGG...............................................................................................................1912.00211
...................................................................................................................TCTCACATCTCTTTATTCACAGA...............................................................2312.00220
......................................................................................................................CACATCTCTTTATTCACAG................................................................1912.00220
...................................................................................................................TCTCACATCTCTTTATTC....................................................................1812.00220
..................................................................................................................CTCTCACATCTCTTTATTCACAG................................................................2312.00220
......................................................................GTGAGTAAT-CAGTTGTGGGTTT............................................................................................................2212.00202
...................................................................................................................TCTCACATCTCTTTATTCACAA................................................................2212.00220
......................................................................GTGAGTAAT-CAGTTGTGGGTGGCT..........................................................................................................2411.00110
...................................................................................................................TCTCACATCTCTTTATTCACAGTA..............................................................2411.00110
......................................................................GTGAGTAAT-CAGTTGTGGGTGGA...........................................................................................................2311.00101
......................................................................GTGAGTAAT-CAGTTGTGGGTGTA...........................................................................................................2311.00101
.................................................................................................................CCTCTCACATCTCTTTATTCACAG................................................................2411.00110
...................................................................................................................TCTCACATCTCTTTATTCACAGAA..............................................................2411.00110
..................................................................................................................CTCTCACATCTCTTTATTCACA.................................................................2211.00110
...................................................................................................................TCTCACATCTCTTTATTCACAAA...............................................................2311.00110
...................................................................................................................TCTCACATCTCTTTATTCACATTG..............................................................2411.00110
...................................................................................................................TCTCACATCTCTTTATTCACAT................................................................2211.00110
......................................................................GTGAGTAAT-CAGTTGTGGGTGGCA..........................................................................................................2411.00101
.......................................................................TGAGTAAT-CAGTTGTGGGTGGT...........................................................................................................2211.00101
......................................................................................................................CACATCTCTTTATTCACA.................................................................1811.00110
....................................................................................................................CTCACATCTCTTTATTCACAGC...............................................................2211.00110
...................................................................................................................TCTCACATCTCTTTATTCACAGTAA.............................................................2520.50110

Generated: 10/20/2015 at 07:13 PM