ID:

dse_981

 Coordinate:

scaffold_2:910992-911142 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.0 -15.8 -15.7

Flybase annnotation

CDS [Dsec\GM14362-cds]; exon [dsec_GLEANR_15144:8]; intron [Dsec\GM14362-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCCTGCGTTTGGTGATTGTTTCCGTTCTGGCGATGGTTACCAGACGTTGAGGTTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTGTATTCAATAGTTTTTTCAACAGTGGGCACAGACAATAAATGTAGAAGAATTATTACTTAGATAATTTTGCCCATATCAGCTATTTAAATTCATAAATGTTATATCTCTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCA
**************************************************...........((((.(((((.......((((((.((((....)))).)))))).....)))))))))........***************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V113
male body		 V115
head
.......................................................................................................TTCAACAGTGGGCACAGACAATA............................................................................................................................. 23 0 1 24.00 24 14 6 2 2
.....................................................................................................TTTTCAACAGTGGGCACAGACAATA............................................................................................................................. 25 0 1 16.00 16 9 2 4 1
............................................CGTTGAGGTTGATGCACGTGCTCCGC..................................................................................................................................................................................... 26 0 1 14.00 14 2 3 9 0
.............GATTGTTTCCGTTCTGGC............................................................................................................................................................................................................................ 18 0 1 10.00 10 0 10 0 0
.........................................................................................................CAACAGTGGGCACAGACAATA............................................................................................................................. 21 0 1 8.00 8 5 1 1 1
....................................................................................................TTTTTCAACAGTGGGCACAGACAATA............................................................................................................................. 26 0 1 7.00 7 5 1 0 1
............................................CGTTGAGGTTGATGCACGTGCTCCGCT.................................................................................................................................................................................... 27 0 1 6.00 6 1 0 5 0
......................CGTTCTGGCGATGGTTACCAGA............................................................................................................................................................................................................... 22 0 1 6.00 6 6 0 0 0
...............................GATGGTTACCAGACGTTGAG........................................................................................................................................................................................................ 20 0 1 6.00 6 0 4 2 0
......................CGTTCTGGCGATGGTTACCA................................................................................................................................................................................................................. 20 0 1 6.00 6 2 4 0 0
........................................................................................................TCAACAGTGGGCACAGACAATA............................................................................................................................. 22 0 1 5.00 5 5 0 0 0
............................................................................................................CAGTGGGCACAGACAATA............................................................................................................................. 18 0 1 4.00 4 1 2 0 1
.......................GTTCTGGCGATGGTTACCAGA............................................................................................................................................................................................................... 21 0 1 4.00 4 4 0 0 0
...........................................................................................................ACAGTGGGCACAGACAATA............................................................................................................................. 19 0 1 4.00 4 3 1 0 0
............................................CGTTGAGGTTGATGCACGTGCT......................................................................................................................................................................................... 22 0 1 3.00 3 0 2 1 0
......................................................................................................TTTCAACAGTGGGCACAGACAATA............................................................................................................................. 24 0 1 3.00 3 1 2 0 0
............................................CGTTGAGGTTGATGCACGTGCTCCG...................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0
.....................................................................................................TTTTCAACAGTGGGCACAGACAATAA............................................................................................................................ 26 0 1 2.00 2 0 1 1 0
...................................................................................................TTTTTTCAACAGTGGGCACAGACAATA............................................................................................................................. 27 0 1 2.00 2 2 0 0 0
....................................................................................................TTTTTCAACAGTGGGCACAG................................................................................................................................... 20 0 1 2.00 2 0 0 2 0
......................................................................................................TTTCAACAGTGGGCACAGACA................................................................................................................................ 21 0 1 2.00 2 1 1 0 0
............................................CGTTGAGGTTGATGCACGTG........................................................................................................................................................................................... 20 0 1 2.00 2 0 1 1 0
.............................................GTTGAGGTTGATGCACGTGCTCCGC..................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0
.......................GTTCTGGCGATGGTTACCA................................................................................................................................................................................................................. 19 0 1 2.00 2 1 1 0 0
..................................................GGTTGATGCACGTGCTCCGC..................................................................................................................................................................................... 20 0 1 2.00 2 0 0 1 1
.................................................................................................................................................................................................................ATCTGTGAAGGAGGCACTGGAGAT.................. 24 0 1 2.00 2 0 2 0 0
...............................................................................................ATAGTTTTTTCAACAGTGGGC....................................................................................................................................... 21 0 1 2.00 2 2 0 0 0
.............................................GTTGAGGTTGATGCACGTGCTC........................................................................................................................................................................................ 22 0 1 2.00 2 0 2 0 0
......................................................................................................TTTCAACAGTGGGCACAGAC................................................................................................................................. 20 0 1 2.00 2 1 1 0 0
............................................CGTTGAGGTTGATGCACGT............................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0
.....CGTTTGGTGATTGTTTCCGTTCTGGC............................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1
......................................................GATGCACGTGCTCCGCTTTTTA............................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.............................................GTTGAGGTTGATGCACGTG........................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0
......................CTTTCTGGCGATGGTTACCAGA............................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0
.........................................AGACGTTGAGGTTGATGCACGTGCTCCGC..................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0
.....................................................TGATGCACGTGCTCCGCTTTTTAAT............................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0
......................CGTTCTGGCGATGGTTACCAGAC.............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
............................................CGTTGAGGTTGATGCACGTGCTCC....................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0
...................................................GTTGATGCACGTGCCCCGC..................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0
...................................................................................................TTTTTTCAACAGTGGGCA...................................................................................................................................... 18 0 1 1.00 1 0 1 0 0
.......................................................................................................TTCAACAGTGGGCTCAGACAATA............................................................................................................................. 23 1 1 1.00 1 1 0 0 0
......................................................................................................TTTCAACAGTGGGCGCAGACAATA............................................................................................................................. 24 1 1 1.00 1 1 0 0 0
.......................................................................................................TTCAACAGTGGGCACAGACA................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
............................................CGTTGAGGTTGATGCACGTGCTCCGCTT................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0
........................TTCTGGCGATGGTTACCA................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1
.........................................................................................................CAACAGTGGTCACAGACAATA............................................................................................................................. 21 1 1 1.00 1 0 1 0 0
.CCTGCGTTTGGTGATTGTTTC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.........................TCTGGCGATGGTTACCAGACGTTGAGGT...................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0
.................................................................................................AGTTTTTTCAACAGTGGGC....................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
.......TTTGGTGATTGTTTCCGTTCTGGCG........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1
..........................................................................................................AACAGTGGGCACAGACAATA............................................................................................................................. 20 0 1 1.00 1 1 0 0 0
.............GATTGTTTCCGTTCTGGCGATG........................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0
GCCTGCGTTTGGTGATTGTTTC..................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.............................................................................TAGAGATAATTGTATTCAATAGTT...................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0
.............GATTGTTTCCGTTCTGGCGATGGT...................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
.....................................................................................................TTTTCAACAGTGGGCACAGAC................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
............................................CGTTGAGGTTGATGCACGTGC.......................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
GCCTGCGTTTGGTGATTGTTTCC.................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
................................................................................................TAGTTTTTTCAACAGTGGGCAC..................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
..........................................GACGTTGAGGTTGATGCACGTGCTCCGCT.................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0
...............................GATGGTTACCAGACGTTGAGGTTG.................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0
......................................................................................................TTTCAACAGTGGGCACAGA.................................................................................................................................. 19 0 1 1.00 1 0 1 0 0
.............GATTGTTTCCGTTCTTGC............................................................................................................................................................................................................................ 18 1 1 1.00 1 0 1 0 0
.............................................TTTGAGGTTGATGCACGTGCTCCGC..................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
..............................................................................AGAGATAATTGTATTCAA........................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0
.......................................................................................................TTCAACAGTGGGCAAAGACAATA............................................................................................................................. 23 1 1 1.00 1 0 0 0 1
.........TGGTGATTGTTTCCGTTCTGGCG........................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0
...............................GATGGTTACCAGACGTTGA......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1
......................................................................................................TTTCAACAGTGGCCACAGACAATA............................................................................................................................. 24 1 1 1.00 1 1 0 0 0
.........................................................................................................CAACAGTGGGCACAGACA................................................................................................................................ 18 0 1 1.00 1 1 0 0 0
.............................................................................TAGAGATAATTGTATTCAATAGTTTT.................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0
GCCTGCGTTTGGTGATTTTTTC..................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0
.................................TGGTTACCAGACGCTGAGGTTGATG................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0
....................................................................................................................................................................................................................TGTGAAGGAGGCACTGGA..................... 18 0 1 1.00 1 0 1 0 0
...............................................TGAGGTTGATGCACGTGCTCCGC..................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0
............................................................................ATAGAGATAATTGTATTC............................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0
....................................................................................................TTTTTCAACAGTGGGCAC..................................................................................................................................... 18 0 1 1.00 1 0 1 0 0
...................................................................................................TTTTTTCAACAGTGGGCACAGA.................................................................................................................................. 22 0 1 1.00 1 0 0 1 0
.............GATTGTTTCCGTTCTGGCGATGGTT..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.........TTGTGATTGTTTCCGTTCTG.............................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0
...............................GATGGTTACCAGACGTTGAGGTTGAT.................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0
.............GATTGTTTCCGTTCTGGCGAT......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
......................CGTTCTGGCGCTGGTTACCA................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0
........................................................................................................TCAACAGTGGGCACAGACAATAA............................................................................................................................ 23 0 1 1.00 1 0 1 0 0
.....................................................................................................TTTTCAACAGTGGGCTCAGACAATA............................................................................................................................. 25 1 1 1.00 1 0 1 0 0
...................................GTTACCAGACGTTGAGGTT..................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0
................................ATGGTTACCAGACGTTGAGGTT..................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
..................................GGTTACCAGACGTTGAGGATG.................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0
............................................................................ATAGAGATAATTGTATTCAATAGTTT..................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0
..................................................................................................GTTTTTTCAACAGTGGGCACAGAC................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
..CTGCGTTTGGTGATTGTTTC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0
............................................CGTTGAGGTTGATGCACG............................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0
..............................................TTGAGGTTGATGCACGTGCTC........................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
........................................................................................................TCAACAGTGGTCACAGACAATA............................................................................................................................. 22 1 1 1.00 1 1 0 0 0
......................CGTTCTGGCGATGGTTACC.................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0
..........................................GACGTTGAGGTTGATGCACGTGCTCCGC..................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0
..CTGCGTTTGGTGATTGTTTCC.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
...................................GTTACCAGACGTTGAGGTTGATGCA............................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1
.......................................................................................................TTCAACAGTGGGCCCAGACAATA............................................................................................................................. 23 1 1 1.00 1 0 1 0 0
..................................................................................................GTTTTTCCCACAGAGGGCA...................................................................................................................................... 19 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

CGGACGCAAACCACTAACAAAGGCAAGACCGCTACCAATGGTCTGCAACTCCAACTACGTGCACGAGGCGAAAAATTATCTCTATTAACATAAGTTATCAAAAAAGTTGTCACCCGTGTCTGTTATTTACATCTTCTTAATAATGAATCTATTAAAACGGGTATAGTCGATAAATTTAAGTATTTACAATATAGAGATGTCTTTCGACGTAGACACTTCCTCCGTGACCTCTAGGAACACCCAGCGCTAGT
*****************************************************************************************************************************...........((((.(((((.......((((((.((((....)))).)))))).....)))))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
.............................................................................................GTTATCTAAAAAGTTGTCAG.......................................................................................................................................... 20 2 7 0.14 1 1 0
.............................................................................................................................................................................................GATAGAGATGTCGATCGACG.......................................... 20 3 8 0.13 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_2:910942-911192 + dse_981 GCCTGCGTTTGGTGATTGTTTCCGTTCTGGCGATGGTTACCA--GACGTTGAGGTTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTGTATTCAATA--GTTT----T-TTC----AACAGTGGGCACAGACAATAAATGTA------------GAAGAATTATTACTTAGATAATTTTGCCCATATCAGCTA-------------------------------------------------------TTTAAATTCAT--AAATGTTAT---AT-----CTCTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCA
droSim2 3l:847083-847333 + dsi_3427 GCCTGCGTTTGGTGATTGTTTCCGTTCTGGCGATGGTCACCA--GACGTTGAGGTTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTGTATTCAATA--GTTT----T-TTC----AACAGTGGGCACAAACAATAAATGTA------------GAATAATTATTACTTAAATAATGTTGCCCATATCAGCTA-------------------------------------------------------TTTAAATTCAT--AAATGTTAT---AT-----CTCTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCA
dm3 chr3L:891347-891597 + GCCTGCGTTTGGTGATTGTTTCCGTTCTGGCGATGGTCACCA--GACGTTGGGGTTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTGTATTCAATA--GTTT----T-TTC----AACAGTGGGCACAAACAATAAATGTA------------GAATAATTATTACTAAGATAATCTTGCACAAATCAGCTT-------------------------------------------------------TTTAAATTCAT--TAATATTAT---AT-----CTCTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCA
droEre2 scaffold_4784:898487-898743 + der_684 GTTTGCGTTTCGTGATTGTCTCCGTTTTGGCGATGGTCACCA--GACGTTGGGGCTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTACATTTG--T--GTTTTTTTTTTTCAACAAACAGTGGGCACAAACAATTAATATA------------ATA----TATAGCTTAGAAAATCATGCTCATAACAACTT-------------------------------------------------T-----TTTGAATTCTT--AAATGTTAT---ATCT---GTTTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATTCTAGTGGGCCGTGACCA
droYak3 3L:870693-870945 + dya_658 GTTTGCGTTGGGTGGTTGTCTCCGTTCTGGCGACGGCCACCA--GACGTTGAGGTTGATGCACGTGCTCCGCTTTCTAATAGAGATAATCAAATGTAATA--TGGTTTTTC-TTT----AATAGTGGACACAAACATTTAATACA------------TTATAA----TACATAGAATATCTTGCTCATATCAGCTT-------------------------------------------------------TTTAAATTCGT--ATGTGTTAT---ATCT---GCTTACAGAAAGCTGCATCTGTAAAGGAGGCACTAGAGATTCTAGTGGGTCGCGATCA
droEug1 scf7180000409184:918577-918822 + GTCTGCGTTTGGCGATGATCTCCGTTCTGGCGATTTTCACTA--GACGCTGAGGTTGATGCACGTGTTTTGCTTTTAATTAGAGAATTTCCGGTCTAGTT--GGTTCTCTC-TTC----AACAGTAGGCACAAACAGAAATAATA------------CAATAT---------------------------------TA--AG--GTACT-----CAGTCAGAT-----------------GGCTTA-----CTTTAATGCTT--GAATTATTT---TA-----CTTTACAGAAAGCTGCTTCTGTGAAGGAAGCGCTGGAGATCCTGGTGGGTCGCGACCA
droBia1 scf7180000300910:984807-985054 + GCCCACATTTGGCGGCTGTCTCCGTTCTGGCGACAATCGCCA--GACGTTGGGGCTGGTGCACGTGTTCCATTTTGCATTTGAGAATTTCCCAGTTAAAA--GGTT----C-TTT----AATAGTGGGCACAAACAATAA---------TA-----------AATATCACTT--------------------------TAAG--TTATATGCGACATTTGAAT-----------------GAATTGC---A--TTAAATCGT--AATTATTAT---TC-----CACCACAGAAAGCTGCCTCCGTGAAGGAAGCACTGGAGATCCTGGTGGGTCGTGATCA
droTak1 scf7180000415111:219783-220042 - GCCCACATTTGGCGATTGTCTCCGTTCTGGCGACAGTCACCA--GACGTTGGGGCTGATGCACGTGCTCCGTTTTGTACTAGAGAATAAATTATTTAATA--GATTTTCTC-TTT----AAAAGTGGGCACAAACAGCTTAAATATTATTA-----------AATATTAATT--------------------------AAAT--TTCTATA-AATATTTATAT-----------------GACTTGA---A--TTAAATCCC--AACTTATTT---CT-----CATTATAGAAAGCCGCCTCTGTAAAGGAAGCGCTAGAGATCCTGGTGGGTCGCGATCA
droEle1 scf7180000491249:4807613-4807872 - GTCTGCGTTTGGTGATTGTCTCCGTTCTGGCTACAGTCACTACTGACGTTGGGGTTGGTGCACGTGCTCCGCTTTTTATTAGAGACTTTTCTATTTAATA--GGTTCTCTT-TAC----AACAGTGGGCACAAACAAATG---------AATATATGGAATAG--------------------------------------------CT-----TAGTTAGATATATTGATTTAAAATATGT-TTA-----ATTTAATGTTT--TAACTTTTG---TT-----CCTTTTAGAAAGCTGCTTCGGTGAAGGAGGCGCTAGAGATCCTGGTGGGTCGCGATCA
droRho1 scf7180000780079:355513-355766 - GCCTACGTTTGGTGACTGTCTCCGTTCTGGCGATAGTCACTATTGACGTTGGGGTTGGTGCACGTGCTTTGCTTTTCATTTGAGAATATCCTATTTAATA--GGTTCTCTC-TTA----AACAGTGGGCACAAACAATTC---------AAA-------ATAT--C-------------------------------T--AG--TTCTT-----CAG---GAAATTTAGATTTTAAATATGTA---------TTACATTCCT--GAATTTTTT---TT-----CCTTATAGAAAGCTGCATCCGTGAAGGAGGCGCTGGAGATCCTGGTGGGTCGCGATCA
droFic1 scf7180000454113:1191868-1192125 - GCCTTCGTTTGGCGACTGTCTCCGTTCTGGCGATAGTCACTATTTACGATGGGGTTGGTGCACGTGCTCCGCTTTTTTAC---GACACTTCTACCTAAAACAATTTGTCAC-TA-----CTGAGTGGGCACAAACAACTG---------CA-----------AATTTT-------------------------AATTTTAAT--TTTTCTTTAATGCTTAATT-----------------AAATTGCTCAA-CTAATTTCGAATATAT-ATTT---TT-----CCCTACAGAAAGCTGCATCTGTAAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCA
droKik1 scf7180000302388:376069-376307 + GCCTGCGTTTTGTGGCTGTCTCCGTTCTGGCGGCAGTCACTAAAAACGTTGGGATTGGTGCAAGTGCTCCACTTTCTTACAGAGTTTCC--TGCTTCTAG--GATTCTTGC-TTT----AACAGTGGGCACAAACAATATATA----------------ATTC---------------------------------TA--AAAATTCCT-----TA---AGAT-----------------ATTT--------------T-AT--TAATATTATTTTCTTTCTCTCCCACAGAAAGCTGCCTCAGTTAAGGAAGCTTTGGAAATCCTAGTGGGTCGCGATCA
droAna3 scaffold_13337:7026542-7026791 - dan_2466 GTCTGGGTTCGACAACTGCCTCCGTTCTGGTGGCATTTGCTTCTAACTTTGGGGTCGATGCACTTGCTCCGCTATTCGTCAGAGATTCTATAGTTAATTA--AGGTTTCTC-TTAA-A-GTTTGCTGGCAAAAACATAAAA---------A------------------------------------TATCAGTTTTTT--------TATCCTTCATCTGTGC-----------------AGTTTGA---A--TTAAATAAT--AATT-GATT---AT-----CCTTGCAGAAAGCTGCCTCGGTTAAGGAGGCCTTGGAGATCCTGGTCGGTCGCGACCA
droBip1 scf7180000396418:28405-28631 - GACTGGGTTAGGTAGGTGCCTCCGTTCTGGTGGCATTTGCCTTTAACTTTGGGGCCGATC------CTCCGCTATTCATCGGAGATTCTGTGCTTAGATC--ACGTTTCTT-CTCA-C-ACATGCGGGCACAAACATTAA-TATA------------GT--------------------------------------T--AAGATCTGT-----TA-----------------------------GG---A--TTAGATAAT--AAT-TGTGT---AT-----CCTTGCAGAAAGCCGCTTCAGTCAAGGAGGCCTTGGAGATCCTGGTCGGCCGTGATCA
dp5 XR_group6:6492399-6492479 + AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTT--AAACGCTGT---TTTTCTAATCCACAGAAAGCCGCTTCTGTCAAGGAAGCTCTAGAGATCCTGGTGGGTCGTGATCA
droPer2 scaffold_82:105355-105435 - AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTT--AAACGCTGT---TTTTCTAAACCACAGAAAGCCGCTTCTGTCAAGGAAGCTCTAGAGATCCTGGTGGGTCGTGATCA
droWil2 scf2_1100000004511:5599046-5599110 + TGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TT-----TCTTACAGAAAGCCGCTTCGGTTAAAGAAGCCTTAGAGATCCTTATTGGACGCGATCA
droVir3 scaffold_13049:15444209-15444263 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAGCCGCCTCGGTGAAGGAGGCTCTTGAGATACTCGTTGGCCGTGATCA
droMoj3 scaffold_6680:21414255-21414314 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----CATTGCAGAAAGCGGCCTCGGTGAAGGAGGCTCTGGAGATACTCGTGGGTCGCGATCA
droGri2 scaffold_15110:17216504-17216568 + AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------GT---TT-----GATTGCAGAAAGCCGCTTCGGTGAAGGAGGCTCTGGAGATACTCGTTGGTCGTGATCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GCCTGCGTTTGGTGATTGTTTCCGTTCTGGCGATGGTTACCA--GACGTTGAGGTTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTGTATTCAATA--GTTT----T-TTC----AACAGTGGGCACAGACAATAAATGTA------------GAAGAATTATTACTTAGATAATTTTGCCCATATCAGCTA-------------------------------------------------------TTTAAATTCAT--AAATGTTAT---AT-----CTCTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................TTC----AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................23124.002414262
.........................................................................................................T----T-TTC----AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................25116.00169421
..............................................CGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................26114.00142930
.............GATTGTTTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................18110.001000100
..................................................................................................................C----AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................2118.0085111
........................................................................................................TT----T-TTC----AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................2617.0075011
..............................................CGTTGAGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2716.0061500
......................CGTTCTGGCGATGGTTACCA--GA.......................................................................................................................................................................................................................................................................................................2216.0066000
...............................GATGGTTACCA--GACGTTGAG................................................................................................................................................................................................................................................................................................2016.0060240
......................CGTTCTGGCGATGGTTACCA--.........................................................................................................................................................................................................................................................................................................2016.0062040
.................................................................................................................TC----AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................2215.0055000
.........................................................................................................................CAGTGGGCACAGACAATA..........................................................................................................................................................................................................1814.0041021
.......................GTTCTGGCGATGGTTACCA--GA.......................................................................................................................................................................................................................................................................................................2114.0044000
........................................................................................................................ACAGTGGGCACAGACAATA..........................................................................................................................................................................................................1914.0043010
..............................................CGTTGAGGTTGATGCACGTGCT.................................................................................................................................................................................................................................................................................2213.0030120
..............................................................................................................T-TTC----AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................2413.0031020
..............................................CGTTGAGGTTGATGCACGTGCTCCG..............................................................................................................................................................................................................................................................................2512.0020020
.........................................................................................................T----T-TTC----AACAGTGGGCACAGACAATAA.........................................................................................................................................................................................................2612.0020110
.......................................................................................................TTT----T-TTC----AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................2712.0022000
........................................................................................................TT----T-TTC----AACAGTGGGCACAG................................................................................................................................................................................................................2012.0020200
..............................................................................................................T-TTC----AACAGTGGGCACAGACA.............................................................................................................................................................................................................2112.0021010
..............................................CGTTGAGGTTGATGCACGTG...................................................................................................................................................................................................................................................................................2012.0020110
...............................................GTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2512.0021010
.......................GTTCTGGCGATGGTTACCA--.........................................................................................................................................................................................................................................................................................................1912.0021010
....................................................GGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2012.0020101
...........................................................................................................................................................................................................................................................................................................ATCTGTGAAGGAGGCACTGGAGAT..................2412.0020020
.................................................................................................ATA--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................2112.0022000
...............................................GTTGAGGTTGATGCACGTGCTC................................................................................................................................................................................................................................................................................2212.0020020
..............................................................................................................T-TTC----AACAGTGGGCACAGAC..............................................................................................................................................................................................................2012.0021010
..............................................CGTTGAGGTTGATGCACGT....................................................................................................................................................................................................................................................................................1911.0010010
.....CGTTTGGTGATTGTTTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................2611.0010001
........................................................GATGCACGTGCTCCGCTTTTTA.......................................................................................................................................................................................................................................................................2211.0011000
...............................................GTTGAGGTTGATGCACGTG...................................................................................................................................................................................................................................................................................1911.0010100
.........................................A--GACGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2911.0010100
.......................................................TGATGCACGTGCTCCGCTTTTTAAT.....................................................................................................................................................................................................................................................................2511.0010100
......................CGTTCTGGCGATGGTTACCA--GAC......................................................................................................................................................................................................................................................................................................2311.0011000
..............................................CGTTGAGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2411.0010100
.......................................................................................................TTT----T-TTC----AACAGTGGGCA...................................................................................................................................................................................................................1811.0010010
................................................................................................................TTC----AACAGTGGGCACAGACA.............................................................................................................................................................................................................2011.0011000
..............................................CGTTGAGGTTGATGCACGTGCTCCGCTT...........................................................................................................................................................................................................................................................................2811.0010100
........................TTCTGGCGATGGTTACCA--.........................................................................................................................................................................................................................................................................................................1811.0010001
.CCTGCGTTTGGTGATTGTTTC...............................................................................................................................................................................................................................................................................................................................2111.0011000
.........................TCTGGCGATGGTTACCA--GACGTTGAGGT..............................................................................................................................................................................................................................................................................................2811.0010100
...................................................................................................A--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................1911.0011000
.......TTTGGTGATTGTTTCCGTTCTGGCG.....................................................................................................................................................................................................................................................................................................................2511.0010001
.......................................................................................................................AACAGTGGGCACAGACAATA..........................................................................................................................................................................................................2011.0011000
.............GATTGTTTCCGTTCTGGCGATG..................................................................................................................................................................................................................................................................................................................2211.0010010
GCCTGCGTTTGGTGATTGTTTC...............................................................................................................................................................................................................................................................................................................................2211.0011000
...............................................................................TAGAGATAATTGTATTCAATA--GTT............................................................................................................................................................................................................................................2411.0010100
.............GATTGTTTCCGTTCTGGCGATGGT................................................................................................................................................................................................................................................................................................................2411.0010010
.........................................................................................................T----T-TTC----AACAGTGGGCACAGAC..............................................................................................................................................................................................................2111.0011000
..............................................CGTTGAGGTTGATGCACGTGC..................................................................................................................................................................................................................................................................................2111.0010010
GCCTGCGTTTGGTGATTGTTTCC..............................................................................................................................................................................................................................................................................................................................2311.0010010
..................................................................................................TA--GTTT----T-TTC----AACAGTGGGCAC..................................................................................................................................................................................................................2211.0010100
............................................GACGTTGAGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2911.0010100
...............................GATGGTTACCA--GACGTTGAGGTTG............................................................................................................................................................................................................................................................................................2411.0010100
..............................................................................................................T-TTC----AACAGTGGGCACAGA...............................................................................................................................................................................................................1911.0010010
................................................................................AGAGATAATTGTATTCAA...................................................................................................................................................................................................................................................1811.0010010
.........TGGTGATTGTTTCCGTTCTGGCG.....................................................................................................................................................................................................................................................................................................................2311.0010100
...............................GATGGTTACCA--GACGTTGA.................................................................................................................................................................................................................................................................................................1911.0010001
..................................................................................................................C----AACAGTGGGCACAGACA.............................................................................................................................................................................................................1811.0011000
...............................................................................TAGAGATAATTGTATTCAATA--GTTT----T-.....................................................................................................................................................................................................................................2611.0010100
..............................................................................................................................................................................................................................................................................................................TGTGAAGGAGGCACTGGA.....................1811.0010010
.................................................TGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2311.0010100
..............................................................................ATAGAGATAATTGTATTC.....................................................................................................................................................................................................................................................1811.0010010
........................................................................................................TT----T-TTC----AACAGTGGGCAC..................................................................................................................................................................................................................1811.0010010
.......................................................................................................TTT----T-TTC----AACAGTGGGCACAGA...............................................................................................................................................................................................................2211.0010100
.............GATTGTTTCCGTTCTGGCGATGGTT...............................................................................................................................................................................................................................................................................................................2511.0011000
...............................GATGGTTACCA--GACGTTGAGGTTGAT..........................................................................................................................................................................................................................................................................................2611.0010010
.............GATTGTTTCCGTTCTGGCGAT...................................................................................................................................................................................................................................................................................................................2111.0010010
.................................................................................................................TC----AACAGTGGGCACAGACAATAA.........................................................................................................................................................................................................2311.0010010
...................................GTTACCA--GACGTTGAGGTT.............................................................................................................................................................................................................................................................................................1911.0010010
................................ATGGTTACCA--GACGTTGAGGTT.............................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................ATAGAGATAATTGTATTCAATA--GTTT----.......................................................................................................................................................................................................................................2611.0010100
......................................................................................................GTTT----T-TTC----AACAGTGGGCACAGAC..............................................................................................................................................................................................................2411.0011000
..CTGCGTTTGGTGATTGTTTC...............................................................................................................................................................................................................................................................................................................................2011.0010100
..............................................CGTTGAGGTTGATGCACG.....................................................................................................................................................................................................................................................................................1811.0010010
................................................TTGAGGTTGATGCACGTGCTC................................................................................................................................................................................................................................................................................2111.0011000
......................CGTTCTGGCGATGGTTACC............................................................................................................................................................................................................................................................................................................1911.0010010
............................................GACGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2811.0010100
..CTGCGTTTGGTGATTGTTTCC..............................................................................................................................................................................................................................................................................................................................2111.0010010
...................................GTTACCA--GACGTTGAGGTTGATGCA.......................................................................................................................................................................................................................................................................................2511.0010001
droSim2
GCCTGCGTTTGGTGATTGTTTCCGTTCTGGCGATGGTCACCA--GACGTTGAGGTTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTGTATTCAATA--GTTT----T-TTC----AACAGTGGGCACAAACAATAAATGTA------------GAATAATTATTACTTAAATAATGTTGCCCATATCAGCTA-------------------------------------------------------TTTAAATTCAT--AAATGTTAT---AT-----CTCTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............GATTGTTTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................18183.00830453160001000000000
................................................................................................................TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................23127.0027110800000001106000
......................CGTTCTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................20110.001001090000000000000
.................GTTTCCGTTCTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................25110.0010000100000000000000
.........................................................................................................T----T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2517.00701040000000101000
......................CGTTCTGGCGATGGTCACCA--GA.......................................................................................................................................................................................................................................................................................................2216.00600150000000000000
.................GTTTCCGTTCTGGCGATGGTCACC............................................................................................................................................................................................................................................................................................................2416.00605000000000100000
.......................GTTCTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................1915.00501040000000000000
.................GTTTCCGTTCTGGCGATG..................................................................................................................................................................................................................................................................................................................1815.00531010000000000000
..............................................................................................................T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2415.00500030000000200000
..................................................................................................................C----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2115.00521000000000200000
...............................................................................................CAATA--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................2314.00422000000000000000
......GTTTGGTGATTGTTTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................2514.00413000000000000000
.......................................................................................................................AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2014.00400020000001100000
................................................................................................AATA--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................2214.00401300000000000000
........................................................................................................TT----T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2613.00300000000000003000
..............ATTGTTTCCGTTCTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................2813.00300030000000000000
.............GATTGTTTCCGTTCTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................2913.00300030000000000000
.............GATTGTTTCCGTTCTGGG......................................................................................................................................................................................................................................................................................................................1812.00201100000000000000
...................................................................................................A--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................1912.00202000000000000000
.................................................................................................................TC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2212.00200010000000001000
.............GATTGTTTCCGTTCTGGCGAT...................................................................................................................................................................................................................................................................................................................2112.00210000000000100000
.........................................................................................................................CAGTGGGCACAAACAATA..........................................................................................................................................................................................................1812.00200010000001000000
..............................................CGTTGAGGTTGATGCACGTGCTC................................................................................................................................................................................................................................................................................2312.00200020000000000000
.................GTTTCCGTTCTGGCGATGGTCACCA--GAC......................................................................................................................................................................................................................................................................................................2812.00202000000000000000
GCCTGCGTTTGGTGATTGTT.................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
.............GATTGTTTCCGTTCTGGCGATG..................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
............................................GACGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2811.00100010000000000000
...................................GTCACCA--GACGTTGAGGTTG............................................................................................................................................................................................................................................................................................2011.00100000000000100000
.................GTTTCCGTTCTGGCGATGGTCACCA--GA.......................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................T----T-TTC----AACAGTGGGCACAAACAATG..........................................................................................................................................................................................................2511.00100000000000100000
..................................GGTCACCA--GACGTTGAGGTTGATG.........................................................................................................................................................................................................................................................................................2411.00110000000000000000
........................TTCTGGCGATGGTCACCA--GAC......................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...TGCGTTTGGTGATTGTTTCC..............................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.......................................................................................................TTT----T-TTC----AACAGTGGGCACAAAC..............................................................................................................................................................................................................2311.00100010000000000000
....GCGTTTGGTGATTGTTTCCG.............................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.................................................................................................ATA--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................2111.00101000000000000000
................................................TTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2411.00100010000000000000
......................................................................................................GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................1811.00101000000000000000
..............................................CGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2611.00100010000000000000
........................................................................................................................ACAGTGGGCACAAACAATA..........................................................................................................................................................................................................1911.00100000000000100000
...............................GATGGTCACCA--GACG.....................................................................................................................................................................................................................................................................................................1511.00100000000001000000
........................TTCTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................1811.00100010000000000000
.................................................................................................ATA--GTTT----T-TTC----AACAGTGGGCA...................................................................................................................................................................................................................2211.00100010000000000000
.................GTTTCCGTTCTGGCGATGGT................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.............................................ACGTTGAGGTTGATGC........................................................................................................................................................................................................................................................................................1611.00100000000001000000
......................CGTTCTGGCGATGGTCACCA--G........................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.........................................................................................................T----T-TTC----AACAGTGGGCACAAACAAT...........................................................................................................................................................................................................2411.00100001000000000000
................................................................................................AATA--GTTT----T-TTC----AACAGTGG......................................................................................................................................................................................................................2011.00100010000000000000
......................................ACCA--GACGTTGAGGTTGATGCAC......................................................................................................................................................................................................................................................................................2311.00100000000001000000
...................................................................TCCGCTTTTTAATAGA..................................................................................................................................................................................................................................................................1611.00100000000010000000
........................................................................................................TT----T-TTC----AACAGTGGGCACAAACA.............................................................................................................................................................................................................2311.00100010000000000000
GCCTGCGTTTGGTGATTGTTTCCGTTCTGG.......................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
...............................GATGGTCACCA--GACGTTGAGGTT.............................................................................................................................................................................................................................................................................................2311.00100010000000000000
............................................................................................ATTCAATA--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................2611.00101000000000000000
......................................ACCA--GACGTTGAGGT..............................................................................................................................................................................................................................................................................................1511.00100000000001000000
.....................................................................................................................................................................................................................................................................................................AGCTGCATCTGTGAAGGAGGC...........................2111.00100001000000000000
.............................GCGATGGTCACCA--GACGTTGAG................................................................................................................................................................................................................................................................................................2211.00100001000000000000
.......................................................................................................TTT----T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................CAGTGGGCACAAACAATAA.........................................................................................................................................................................................................1911.00100000000000100000
..........................CTGGCGATGGTCACCA--GA.......................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.........................................................................................................................................................................................................................................................................................................GCATCTGTGAAGGAGGCAC.........................1911.00100000000001000000
..............................................................................................TCAATA--GTTT----T-TTC----AACAGTGGGCA...................................................................................................................................................................................................................2511.00100010000000000000
.CCTGCGTTTGGTGATTGTTTC...............................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
........................TTCTGGCGATGGTCACCA--GA.......................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...................................................................................................A--GTTT----T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2911.00100010000000000000
.......................................................TGATGCACGTGCTCCGCTTTTTAATAGA..................................................................................................................................................................................................................................................................2811.00100010000000000000
................................ATGGTCACCA--GACGTT...................................................................................................................................................................................................................................................................................................1611.00100000000001000000
..............................................................................................................................................................................................................................................................................................................TGTGAAGGAGGCACTGGAGATCCTTG.............2611.00100010000000000000
.............................................................................................TTCAATA--GTTT----T-TTC----AACAGTGGGC....................................................................................................................................................................................................................2511.00100100000000000000
...........................................................................................................................GTGGGCACAAACAATA..........................................................................................................................................................................................................1611.00100000000001000000
GCCTGCGTTTGGTGATTGTTT................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................ACGTTGAGGTTGATGCAC......................................................................................................................................................................................................................................................................................1811.00100000100000000000
......GTTTGGTGATTGTTTCCA.............................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
dm3
GCCTGCGTTTGGTGATTGTTTCCGTTCTGGCGATGGTCACCA--GACGTTGGGGTTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTGTATTCAATA--GTTT----T-TTC----AACAGTGGGCACAAACAATAAATGTA------------GAATAATTATTACTAAGATAATCTTGCACAAATCAGCTT-------------------------------------------------------TTTAAATTCAT--TAATATTAT---AT-----CTCTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................231420.00420000001000003000000000105000000000000110300000700000101000000000000000000000000000020010410020042051135140110191516093350137000000000000000000830000001000000100000000000000000201000000010200000001101000101000000000001000005312002020003000100001200004100011030000000010001410002000000000010121100210804220404001106000420001001530001001110501
..............................................................................................................T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................24174.00740000000000020000000000040000000000000000000000000000010000000000000000000000000000000001000000402011000011331012000000000000000000000010000000060000000000000000000000000000000000000000000300100020000000010000000100100004000003200000000000002000000010000000000000301000110000000000000000000101100000010000011000100020000000000300
........................................................................................................................ACAGTGGGCACAAACAATA..........................................................................................................................................................................................................19165.0065000000000000000000000001000000000000000100000100100000000000000000000000000000000000000200000000010100001310000000100001000000000000000000000000000000000000000001000000000000000000000020000000000000000000000000000000000000000000000000001000011000100200010020000010000010100000010002000000000000000000100000000010000000000000310800
.................GTTTCCGTTCTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................25164.0064000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000010013013300020000010123000000000000001000000071100000000000000000000000000000020000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................22162.0062000000000000000000000000000000000000000000000100000000000000000000000000000000000000000210010000000000000513140300001000000000000000000000000000000000000000000000000000000000000000000000000002000000200000010000000000000000000000000000000000001010000240000000000001000000000000000000000000000000100000000100100000000100200010000000
..................................................................................................................C----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................21153.005300000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000001240000174000000110000000000000000000000000000000001100000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000300020000000000000000000000000000000001001000000000000000000000000000011000014300
.......................................................................................................................AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................20151.005100000000000000000000001200000000000000000000010000000000000000000000000000000000000000000001000010010000125000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000020000000000000200000101000000000000000000000000000000000000000001000000000000000000000100220310
.........................................................................................................T----T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................25147.00470000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000202113000000101000000000000000000000000021000000000000010000000000000000000000000000000000000110000000000000000000000000060006000002000000001000000000001000000000000000100000000000000000100000000200000010010000000000000002100000200010
.........................................................................................................................CAGTGGGCACAAACAATA..........................................................................................................................................................................................................18141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000211100100001000000000000000000000000000000010100000000000000000000000000000000000000000000000030000000000000120000000000000000000001000001010000120000000000000000000000000000000000000000100000000000000000000001000000000013200
................................................................................................................TTC----AACAGTGGGCACAAACAATAA.........................................................................................................................................................................................................24126.00260000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000701121000000000104001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000001000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000
........................................................................................................TT----T-TTC----AACAGTGGGCACAAACAATA..........................................................................................................................................................................................................26118.00180000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100100010000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000020000010001000010100000000003
...............................GATGGTCACCA--GACGTTGGG................................................................................................................................................................................................................................................................................................20118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTTGGGGTTGATGCACGTGCTCCG..............................................................................................................................................................................................................................................................................24117.00170000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000100000000000000000000000000000000100003010100002000000000000000001003000
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.....................................................GTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000
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..............................CGATGGTCACCA--GACGTTGG.................................................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
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..............................CGATGGTCACCA--GACGTTGGG................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
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................................................................................................................TTC----AACAGTGGGCACAAAC..............................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
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.................................................TGGGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
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.........................................................ATGCACGTGCTCCGCTTTTT........................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.................GTTTCCGTTCTGGCGATGG.................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
............................GGCGATGGTCACCA--GACGTTGGG................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
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............................................GACGTTGGGGTTGATGCACGT....................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................GATGGTCACCA--GACGTTGGGGTTGA...........................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
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...................................................GGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
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...............................GATGGTCACCA--GACGTTG..................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000
.........................................A--GACGTTGGGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
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......................................................................................................................................................................................................................................................................................................GCTGCATCTGTGAAGGAG.............................1812.0020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AGTGGGCACAAACAATAA.........................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................T-TTC----AACAGTGGGCACAAACAAT...........................................................................................................................................................................................................2312.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CGTTGGGGTTGATGCACGTG...................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000
.........................................................................................................T----T-TTC----AACAGTGGGCACAAACAATAA.........................................................................................................................................................................................................2612.0020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATTGTTTCCGTTCTGGCGA....................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000
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...................TTCCGTTCTGGCGATGGTCACC............................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GACGTTGGGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.............................................ACGTTGGGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
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..........................CTGGCGATGGTCACCA--GACGTTGGG................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACCA--GACGTTGGGGTTGATGCACGTGC..................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................TTGGGGTTGATGCACGTGC..................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000
..................................................GGGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTTGGGGTTGATGCACGTG...................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................CTGTGAAGGAGGCACTGGAGATC.................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................GACGTTGGGGTTGATGCACGTGC..................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................CGTTGGGGTTGATGCACGTGC..................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
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....................................................................................................................................................................................................................................................................................................AAGCTGCATCTGTGAAGGAGGC...........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................TTGATGCACGTGCTCCGCTTTTTAAT.....................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................AGAGATAATTGTATTCAATA--GTTT----T-.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................ACGTTGGGGTTGATGCACGTG...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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.................................................TGGGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................CACCA--GACGTTGGGGTTGATGCAC......................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GCACGTGCTCCGCTTTTTAATAGAGAT...............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACGTTGGGGTTGATGCAC......................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
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..............................CGATGGTCACCA--GACGT....................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TGTGAAGGAGGCACTGGAGATC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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.............................................ACGTTGGGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TT----T-TTC----AACAGTGGGCACA.................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................GATAATTGTATTCAATA--GTT............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
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...................................................GGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................ACCA--GACGTTGGGGTTGA...........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................TTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................TGCACGTGCTCCGCTTTTTAATAGAG.................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................A--GACGTTGGGGTTGATGCA.......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGCTGCATCTGTGAAGGA..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................TTGGGGTTGATGCACGTGCTCCG..............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................GATGCACGTGCTCCGCTTTTT........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CGTTGGGGTTGATGCACGTGG..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GGAGGCACTGGAGATCCTTGTGG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACGTTGGGGTTGATGCACGT....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................................................................AGAGATAATTGTATTCAA...................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................ATAGAGATAATTGTATTCAATA--...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CGTTGGGGTTGATGCACGT....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
GTTTGCGTTTCGTGATTGTCTCCGTTTTGGCGATGGTCACCA--GACGTTGGGGCTGATGCACGTGCTCCGCTTTTTAATAGAGATAATTACATTTG--T--GTTTTTTTTTTTCAACAAACAGTGGGCACAAACAATTAATATA------------ATA----TATAGCTTAGAAAATCATGCTCATAACAACTT-------------------------------------------------T-----TTTGAATTCTT--AAATGTTAT---ATCT---GTTTACAGAAAGCTGCATCTGTGAAGGAGGCACTGGAGATTCTAGTGGGCCGTGACCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............GATTGTCTCCGTTTTGGC......................................................................................................................................................................................................................................................................................................................18124.002458010100
..................................................................................................................CAACAAACAGTGGGCACAAACAATT..........................................................................................................................................................................................................25120.00203500570
......................CGTTTTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................20117.00177105130
.......................GTTTTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................19112.00127011210
......................CGTTTTGGCGATGGTCACCA--GA.......................................................................................................................................................................................................................................................................................................22111.00112102060
..............................................CGTTGGGGCTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2618.0082500010
.....CGTTTCGTGATTGTCTCCGTTTTGGC......................................................................................................................................................................................................................................................................................................................2618.0080000008
................................................................................................................TTCAACAAACAGTGGGCACAAACAATT..........................................................................................................................................................................................................2715.0054100000
........................................................................................................................ACAGTGGGCACAAACAATT..........................................................................................................................................................................................................1915.0050202010
GTTTGCGTTTCGTGATTGTCTC...............................................................................................................................................................................................................................................................................................................................2215.0050101300
..................................................................................................................CAACAAACAGTGGGCACAAACAATTA.........................................................................................................................................................................................................2615.0052002010
...................................................................................................................AACAAACAGTGGGCACAAACAATT..........................................................................................................................................................................................................2415.0051100120
....................................................................................................................ACAAACAGTGGGCACAAACAATT..........................................................................................................................................................................................................2314.0040200110
GTTTGCGTTTCGTGATTGTCTCC..............................................................................................................................................................................................................................................................................................................................2313.0031100010
.......................................................................................................................AACAGTGGGCACAAACAATT..........................................................................................................................................................................................................2013.0030100020
...............................GATGGTCACCA--GACGTTGGGGCTG............................................................................................................................................................................................................................................................................................2412.0022000000
..............................................................................................................TTTTCAACAAACAGTGGGCACAAACAATT..........................................................................................................................................................................................................2912.0022000000
.......................GTTTTGGCGATGGTCACCA--GA.......................................................................................................................................................................................................................................................................................................2112.0022000000
.............GATTGTCTCCGTTTTGGCGATGGT................................................................................................................................................................................................................................................................................................................2412.0021000100
.....................................................................................................................CAAACAGTGGGCACAAACAATT..........................................................................................................................................................................................................2212.0020100010
..............................................CGTTGGGGCTGATGCACGTGCTC................................................................................................................................................................................................................................................................................2312.0020100010
............................................GACGTTGGGGCTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2812.0021100000
......................................................................................................................AAACAGTGGGCACAAACAATT..........................................................................................................................................................................................................2112.0020100010
......GTTTCGTGATTGTCTCCGTTTTGGC......................................................................................................................................................................................................................................................................................................................2512.0020000110
.................GTCTCCGTTTTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................2512.0021000010
............................................GACGTTGGGGCTGATGCACGT....................................................................................................................................................................................................................................................................................2111.0010000100
............................................GACGTTGGGGCTGATGCACGTG...................................................................................................................................................................................................................................................................................2211.0010000010
...................CTCCGTTTTGGCGATGGTCACCA--GA.......................................................................................................................................................................................................................................................................................................2511.0011000000
............................................GACGTTGGGGCTGATGCACGTGCTC................................................................................................................................................................................................................................................................................2511.0010000010
.......................................................TGATGCACGTGCTCCGCTTTTT........................................................................................................................................................................................................................................................................2211.0010010000
.......................................................................................................................AACAGTGGGCACAAACAATTA.........................................................................................................................................................................................................2111.0010000010
...............................................................................................................TTTCAACAAACAGTGGGCACAAACAATA..........................................................................................................................................................................................................2811.0010010000
.............GATTGTCTCCGTTTTGGCGAT...................................................................................................................................................................................................................................................................................................................2111.0010001000
...............................GATGGTCACCA--GACGTTGGGG...............................................................................................................................................................................................................................................................................................2111.0010000010
.TTTGCGTTTCGTGATTGTCTC...............................................................................................................................................................................................................................................................................................................................2111.0010000100
.....................................................................................................................................................................................................................................................................................................AGCTGCATCTGTGAAGGAGGC...........................2111.0011000000
....GCGTTTCGTGATTGTCTCCGTTTTGGC......................................................................................................................................................................................................................................................................................................................2711.0010100000
.......................................................................................................................AACAGTGGGCACAAACAAT...........................................................................................................................................................................................................1911.0010000010
...............................................................................................................TTTCAACAAACAGTGGGCA...................................................................................................................................................................................................................1911.0010000010
...............................................GTTGGGGCTGATGCACGTG...................................................................................................................................................................................................................................................................................1911.0010000100
............................................................................................................TTTTTTCAACAAACAGTGGGCAC..................................................................................................................................................................................................................2311.0010000010
...........................................................................TTAATAGAGATAATTACATTTG--T--GT.............................................................................................................................................................................................................................................2511.0010000100
..................................................................................AGATAATTACATTTG--T--GTTTTTTTT......................................................................................................................................................................................................................................2511.0010100000
...............................GATGGTCACCA--GACGTTGGGGCT.............................................................................................................................................................................................................................................................................................2311.0010000010
...............................................................................................................TTTCAACAAACAGTGGGCACAAAC..............................................................................................................................................................................................................2411.0010001000
......................CGTTTTGGCGATGGTCACC............................................................................................................................................................................................................................................................................................................1911.0010001000
..............ATTGTCTCCGTTTTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................2811.0010000100
............................................................................................................TTTTTTCAACAAACAGTGGG.....................................................................................................................................................................................................................2011.0011000000
..................................................................................................................CAACAAACAGTGGGCACAA................................................................................................................................................................................................................1911.0010000010
........................................................GATGCACGTGCTCCGCTTTTTAATAGA..................................................................................................................................................................................................................................................................2711.0010100000
...................CTCCGTTTTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................2311.0011000000
................................................................................................................TTCAACAAACAGTGGGCACAAAC..............................................................................................................................................................................................................2311.0011000000
..............................................................................ATAGAGATAATTACATTTG--T--GT.............................................................................................................................................................................................................................................2211.0010001000
.......................GTTTTGGCGATGGTCACCA--GAC......................................................................................................................................................................................................................................................................................................2211.0010000010
...............................................................................................................TTTCAACAAACAGTGGGCAC..................................................................................................................................................................................................................2011.0011000000
............................................GACGTTGGGGCTGATGCACGTGC..................................................................................................................................................................................................................................................................................2311.0010000100
...............................................GTTGGGGCTGATGCACGTGCTCCGCTT...........................................................................................................................................................................................................................................................................2711.0011000000
........................................................................TTTTTAATAGAGATAATTACATTTG--T--G..............................................................................................................................................................................................................................................2711.0010000100
....................TCCGTTTTGGCGATGGTCACCA--.........................................................................................................................................................................................................................................................................................................2211.0011000000
............................................GACGTTGGGGCTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2911.0010100000
.......................................................................................................................AACAGTGGGCACAAACAA............................................................................................................................................................................................................1811.0010001000
........................................................................................................TTTTTTTTTTCAACAAACAGTGGG.....................................................................................................................................................................................................................2411.0010000010
..................................................................................................................CAACAAACAGTGGGCACAAA...............................................................................................................................................................................................................2011.0010000100
..............................................................................................................TTTTCAACAAACAGTGGGCACAAACAA............................................................................................................................................................................................................2711.0010000010
..............................................CGTTGGGGCTGATGCACG.....................................................................................................................................................................................................................................................................................1811.0010001000
.........................................................................................................................CAGTGGGCACAAACAATT..........................................................................................................................................................................................................1811.0010000010
.....................................................................................................................CAAACAGTGGGCACAAACAATTA.........................................................................................................................................................................................................2311.0010100000
..................................................................................................................CAACAAACAGTGGGCACAAACA.............................................................................................................................................................................................................2211.0010000010
................................ATGGTCACCA--GACGTTGGGGCT.............................................................................................................................................................................................................................................................................................2211.0011000000
..............................................CGTTGGGGCTGATGCACGTGCTCCGCTT...........................................................................................................................................................................................................................................................................2811.0010100000
droYak3
GTTTGCGTTGGGTGGTTGTCTCCGTTCTGGCGACGGCCACCA--GACGTTGAGGTTGATGCACGTGCTCCGCTTTCTAATAGAGATAATCAAATGTAATA--TGGTTTTTC-TTT----AATAGTGGACACAAACATTTAATACA------------TTATAA----TACATAGAATATCTTGCTCATATCAGCTT-------------------------------------------------------TTTAAATTCGT--ATGTGTTAT---ATCT---GCTTACAGAAAGCTGCATCTGTAAAGGAGGCACTAGAGATTCTAGTGGGTCGCGATCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................CGTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................20186.0086081320000000
..............................................CGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................26171.00710110102570000
...............................................GTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................25139.0039020001360000
............................................GACGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................28136.0036031000320000
.......................GTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................19131.0031031000000000
...................CTCCGTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................23128.0028028000000000
GTTTGCGTTGGGTGGTTGT..................................................................................................................................................................................................................................................................................................................................19127.0027010001250000
......................CGTTCTGGCGACGGCCACCA--GA.......................................................................................................................................................................................................................................................................................................22127.0027024200100000
..............................................................................................................C-TTT----AATAGTGGACACAAACATTT..........................................................................................................................................................................................................24125.0025024000010000
................................................TTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................24121.0021000000210000
..............................................CGTTGAGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................27121.0021020002170000
GTTTGCGTTGGGTGGTTGTCTC...............................................................................................................................................................................................................................................................................................................................22119.0019151011100000
.............GGTTGTCTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................18115.001557300000000
..............GTTGTCTCCGTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................28114.0014014000000000
...............................................GTTGAGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................26112.0012000010110000
..............................................CGTTGAGGTTGATGCACGTGCTC................................................................................................................................................................................................................................................................................23110.0010000000100000
.TTTGCGTTGGGTGGTTGTCTC...............................................................................................................................................................................................................................................................................................................................21110.001002000170000
........................TTCTGGCGACGGCCACCA--GA.......................................................................................................................................................................................................................................................................................................20110.0010010000000000
..............................................CGTTGAGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2419.00900100170000
..................TCTCCGTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................2419.00909000000000
.................................................TGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2318.00800000080000
..............................................................................................................C-TTT----AATAGTGGACACAAACATTTA.........................................................................................................................................................................................................2517.00707000000000
............................................GACGTTGAGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2617.00701100050000
............................................GACGTTGAGGTTGATGCACGT....................................................................................................................................................................................................................................................................................2116.00600000060000
..............................................CGTTGAGGTTGATGCACGTGCT.................................................................................................................................................................................................................................................................................2216.00600001050000
.......................GTTCTGGCGACGGCCACCA--GA.......................................................................................................................................................................................................................................................................................................2116.00606000000000
............................................GACGTTGAGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2916.00600000060000
.................GTCTCCGTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................2516.00606000000000
GTTTGCGTTGGGTGGTTGTCT................................................................................................................................................................................................................................................................................................................................2115.00500000050000
......GTTGGGTGGTTGTCTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................2515.00501000040000
..............................................................................................................C-TTT----AATAGTGGACACAAAC..............................................................................................................................................................................................................2014.00410000030000
.TTTGCGTTGGGTGGTTGTCTCC..............................................................................................................................................................................................................................................................................................................................2214.00400000040000
..............................................CGTTGAGGTTGATGCACGTG...................................................................................................................................................................................................................................................................................2014.00400000040000
......................CGTTCTGGCGACGGCCACCA--G........................................................................................................................................................................................................................................................................................................2114.00403000100000
GTTTGCGTTGGGTGGTTGTCTCC..............................................................................................................................................................................................................................................................................................................................2314.00403000010000
................................................................................................................TTT----AATAGTGGACACAAACATTT..........................................................................................................................................................................................................2313.00303000000000
GTTTGCGTTGGGTGGTTG...................................................................................................................................................................................................................................................................................................................................1813.00301000020000
..................................................................................................................T----AATAGTGGACACAAACATTT..........................................................................................................................................................................................................2113.00303000000000
.............GGTTGTCTCCGTTCTGGCGAC...................................................................................................................................................................................................................................................................................................................2113.00311100000000
.....................CCGTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................2113.00302100000000
...............................................GTTGAGGTTGATGCACGTGCTCC...............................................................................................................................................................................................................................................................................2312.00200000020000
..........................................................................................................TTTTC-TTT----AATAGTGGACAC..................................................................................................................................................................................................................2012.00220000000000
...................CTCCGTTCTGGCGACGGCCACCA--GA.......................................................................................................................................................................................................................................................................................................2512.00202000000000
.......................................................................................................................AATAGTGGACACAAACATTT..........................................................................................................................................................................................................2012.00202000000000
.....................................................GTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................1912.00200001010000
............................................GACGTTGAGGTTGATGCAC......................................................................................................................................................................................................................................................................................1912.00200000020000
....................TCCGTTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................2212.00202000000000
............................................................................................................TTC-TTT----AATAGTGGACACAAACATTT..........................................................................................................................................................................................................2612.00202000000000
.............GGTTGTCTCCGTTCTGGCGA....................................................................................................................................................................................................................................................................................................................2012.00202000000000
..................................................GAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2212.00200000020000
..TTGCGTTGGGTGGTTGTCTC...............................................................................................................................................................................................................................................................................................................................2012.00200000020000
..............GTTGTCTCCGTTCTGGCGAC...................................................................................................................................................................................................................................................................................................................2012.00202000000000
............................................GACGTTGAGGTTGATGCACGTGCTCCGA.............................................................................................................................................................................................................................................................................2811.00100000010000
..............................................CGTTGAGGTTGATGCACGTGCTCCGCC............................................................................................................................................................................................................................................................................2711.00100000010000
.................................................................................................................TT----AATAGTGGACACAAACATTTA.........................................................................................................................................................................................................2311.00101000000000
.....................CCGTTCTGGCGACGGCCACCA--GAC......................................................................................................................................................................................................................................................................................................2411.00100100000000
.......TTGGGTGGTTGTCTCCGTTCTGGCGACGGC................................................................................................................................................................................................................................................................................................................3011.00100000010000
...................................................................................GATAATCAAATGTAATA--TGGTTTTTC-.....................................................................................................................................................................................................................................2611.00101000000000
...............................................GTTGAGGTTGATGCACGTG...................................................................................................................................................................................................................................................................................1911.00100000010000
.TTTGCGTTGGGTGGTTGTC.................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.............................................................................................................TC-TTT----AATAGTGGACACAAACATTT..........................................................................................................................................................................................................2511.00101000000000
.......................................................................................ATCAAATGTAATA--TGGTTTTT.......................................................................................................................................................................................................................................2111.00101000000000
...TGCGTTGGGTGGTTGTCTC...............................................................................................................................................................................................................................................................................................................................1911.00100000010000
............................................GACGTTGAGGTTGATGCACGTGCTCCG..............................................................................................................................................................................................................................................................................2711.00100000010000
.............................................................................AATAGAGATAATCAAATGTAATA--TGGT...........................................................................................................................................................................................................................................2711.00101000000000
.............GGTTGTCTCCGTTCTGGCGACGGC................................................................................................................................................................................................................................................................................................................2411.00101000000000
.............................................ACGTTGAGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2811.00100000010000
.............................................................................AATAGAGATAATCAAATGTAATA--TGGTT..........................................................................................................................................................................................................................................2811.00100000010000
..............................................................................................................C-TTT----AATAGTGGACACAAACATT...........................................................................................................................................................................................................2311.00101000000000
............................................................CACGTGCTCCGCTTTCTAATAGAGATAATC...........................................................................................................................................................................................................................................................3011.00100000010000
.TTTGCGTTGGGTGGTTGT..................................................................................................................................................................................................................................................................................................................................1811.00100000100000
................TGTCTCCGTTCTGGCGACGGCCAC.............................................................................................................................................................................................................................................................................................................2411.00100100000000
..........................................................................TCTAATAGAGATAATCAAATGT.....................................................................................................................................................................................................................................................2211.00100000010000
................................................TTGAGGTTGATGCACGTGCTC................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................TTT----AATAGTGGACACAAACATTTA.........................................................................................................................................................................................................2411.00101000000000
...................................................AGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2211.00100000010000
...TGCGTTGGGTGGTTGTCTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................2811.00100000010000
.............................................ACGTTGAGGTTGATGCACGTGCTCCGC.............................................................................................................................................................................................................................................................................2711.00100000010000
.........................TCTGGCGACGGCCACCA--GACGTTGAGGTT.............................................................................................................................................................................................................................................................................................2911.00100000010000
........TGGGTGGTTGTCTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................................................................TAATAGAGATAATCAAATGTAATA--TGGT...........................................................................................................................................................................................................................................2811.00100000010000
.....CGTTGGGTGGTTGTCTCCGTTCTGGC......................................................................................................................................................................................................................................................................................................................2611.00100100000000
...................CTCCGTTCTGGCGACGGCC...............................................................................................................................................................................................................................................................................................................1911.00101000000000
........................TTCTGGCGACGGCCACCA--.........................................................................................................................................................................................................................................................................................................1811.00101000000000
....GCGTTGGGTGGTTGTCTCC..............................................................................................................................................................................................................................................................................................................................1911.00101000000000
................................................TTGAGGTTGATGCACGTGCTCCGCT............................................................................................................................................................................................................................................................................2511.00100000010000
...........................................................................CTAATAGAGATAATCAAATGT.....................................................................................................................................................................................................................................................2111.00100000010000
..............GTTGTCTCCGTTCTGGCGACG..................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............GGTTGTCTCCGTTCTGGCGACGGCC...............................................................................................................................................................................................................................................................................................................2511.00100100000000
.........................................A--GACGTTGAGGTTGATGCAC......................................................................................................................................................................................................................................................................................2011.00100000010000
............................................GACGTTGAGGTTGATGCACGTGCT.................................................................................................................................................................................................................................................................................2411.00100000100000
...................CTCCGTTCTGGCGACGGCCACCA--C........................................................................................................................................................................................................................................................................................................2411.00100100000000
............................................GACGTTGAGGTTGATGCACGTGC..................................................................................................................................................................................................................................................................................2311.00100000010000
...................CTCCGTTCTGGCGACGGCCACC............................................................................................................................................................................................................................................................................................................2211.00100100000000
..............GTTGTCTCCGTTCTGGCGACGGC................................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................................................ATGCACGTGCTCCGCTTTCTA.......................................................................................................................................................................................................................................................................2111.00100000010000
.................GTCTCCGTTCTGGCGACGG.................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................................................................................ATGTAATA--TGGTTTTTC-TTT----AATAGTGGA.....................................................................................................................................................................................................................2911.00100000010000
...................................................................................GATAATCAAATGTAATA--TGGTTTT........................................................................................................................................................................................................................................2411.00101000000000
......................CGTTCTGGCGACGGCCACCA--GAC......................................................................................................................................................................................................................................................................................................2311.00101000000000
.......TTGGGTGGTTGTCTCCGTTCT.........................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................GTTGATGCACGTGCTCCGCTTTCTA.......................................................................................................................................................................................................................................................................2511.00101000000000
.......................GTTCTGGCGACGGCCACCA--GACG.....................................................................................................................................................................................................................................................................................................2311.00101000000000
........................TTCTGGCGACGGCCACCA--G........................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................GTTCTGGCGACGGCCACCA--GAC......................................................................................................................................................................................................................................................................................................2211.00101000000000
.........................................................................TTCTAATAGAGATAATCAAATGT.....................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................AATA--TGGTTTTTC-TTT----AATAGTGGAC....................................................................................................................................................................................................................2611.00110000000000
droEug1
GTCTGCGTTTGGCGATGATCTCCGTTCTGGCGATTTTCACTA--GACGCTGAGGTTGATGCACGTGTTTTGCTTTTAATTAGAGAATTTCCGGTCTAGTT--GGTTCTCTC-TTC----AACAGTAGGCACAAACAGAAATAATA------------CAATAT---------------------------------TA--AG--GTACT-----CAGTCAGAT-----------------GGCTTA-----CTTTAATGCTT--GAATTATTT---TA-----CTTTACAGAAAGCTGCTTCTGTGAAGGAAGCGCTGGAGATCCTGGTGGGTCGCGACCASizeHit CountTotal NormTotal
No Reads
droBia1
GCCCACATTTGGCGGCTGTCTCCGTTCTGGCGACAATCGCCA--GACGTTGGGGCTGGTGCACGTGTTCCATTTTGCATTTGAGAATTTCCCAGTTAAAA--GGTT----C-TTT----AATAGTGGGCACAAACAATAA---------TA-----------AATATCACTT--------------------------TAAG--TTATATGCGACATTTGAAT-----------------GAATTGC---A--TTAAATCGT--AATTATTAT---TC-----CACCACAGAAAGCTGCCTCCGTGAAGGAAGCACTGGAGATCCTGGTGGGTCGTGATCASizeHit CountTotal NormTotal
No Reads
droTak1
GCCCACATTTGGCGATTGTCTCCGTTCTGGCGACAGTCACCA--GACGTTGGGGCTGATGCACGTGCTCCGTTTTGTACTAGAGAATAAATTATTTAATA--GATTTTCTC-TTT----AAAAGTGGGCACAAACAGCTTAAATATTATTA-----------AATATTAATT--------------------------AAAT--TTCTATA-AATATTTATAT-----------------GACTTGA---A--TTAAATCCC--AACTTATTT---CT-----CATTATAGAAAGCCGCCTCTGTAAAGGAAGCGCTAGAGATCCTGGTGGGTCGCGATCASizeHit CountTotal NormTotal
No Reads
droEle1
GTCTGCGTTTGGTGATTGTCTCCGTTCTGGCTACAGTCACTACTGACGTTGGGGTTGGTGCACGTGCTCCGCTTTTTATTAGAGACTTTTCTATTTAATA--GGTTCTCTT-TAC----AACAGTGGGCACAAACAAATG---------AATATATGGAATAG--------------------------------------------CT-----TAGTTAGATATATTGATTTAAAATATGT-TTA-----ATTTAATGTTT--TAACTTTTG---TT-----CCTTTTAGAAAGCTGCTTCGGTGAAGGAGGCGCTAGAGATCCTGGTGGGTCGCGATCASizeHit CountTotal NormTotal
No Reads
droRho1
GCCTACGTTTGGTGACTGTCTCCGTTCTGGCGATAGTCACTATTGACGTTGGGGTTGGTGCACGTGCTTTGCTTTTCATTTGAGAATATCCTATTTAATA--GGTTCTCTC-TTA----AACAGTGGGCACAAACAATTC---------AAA-------ATAT--C-------------------------------T--AG--TTCTT-----CAG---GAAATTTAGATTTTAAATATGTA---------TTACATTCCT--GAATTTTTT---TT-----CCTTATAGAAAGCTGCATCCGTGAAGGAGGCGCTGGAGATCCTGGTGGGTCGCGATCASizeHit CountTotal NormTotal
No Reads
droFic1
GCCTTCGTTTGGCGACTGTCTCCGTTCTGGCGATAGTCACTATTTACGATGGGGTTGGTGCACGTGCTCCGCTTTTTTAC---GACACTTCTACCTAAAACAATTTGTCAC-TA-----CTGAGTGGGCACAAACAACTG---------CA-----------AATTTT-------------------------AATTTTAAT--TTTTCTTTAATGCTTAATT-----------------AAATTGCTCAA-CTAATTTCGAATATAT-ATTT---TT-----CCCTACAGAAAGCTGCATCTGTAAAGGAGGCACTGGAGATCCTTGTGGGTCGCGATCASizeHit CountTotal NormTotal
No Reads
droKik1
GCCTGCGTTTTGTGGCTGTCTCCGTTCTGGCGGCAGTCACTAAAAACGTTGGGATTGGTGCAAGTGCTCCACTTTCTTACAGAGTTTCC--TGCTTCTAG--GATTCTTGC-TTT----AACAGTGGGCACAAACAATATATA----------------ATTC---------------------------------TA--AAAATTCCT-----TA---AGAT-----------------ATTT--------------T-AT--TAATATTATTTTCTTTCTCTCCCACAGAAAGCTGCCTCAGTTAAGGAAGCTTTGGAAATCCTAGTGGGTCGCGATCASizeHit CountTotal NormTotal
No Reads
droAna3
GTCTGGGTTCGACAACTGCCTCCGTTCTGGTGGCATTTGCTTCTAACTTTGGGGTCGATGCACTTGCTCCGCTATTCGTCAGAGATTCTATAGTTAATTA--AGGTTTCTC-TTAA-A-GTTTGCTGGCAAAAACATAAAA---------A------------------------------------TATCAGTTTTTT--------TATCCTTCATCTGTGC-----------------AGTTTGA---A--TTAAATAAT--AATT-GATT---AT-----CCTTGCAGAAAGCTGCCTCGGTTAAGGAGGCCTTGGAGATCCTGGTCGGTCGCGACCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
GTCTGGGTTCGACAACTGC..................................................................................................................................................................................................................................................................................................................................19110.0010131014
......................CGTTCTGGTGGCATTTGCTTCT.........................................................................................................................................................................................................................................................................................................22110.0010640000
...................CTCCGTTCTGGTGGCATTTGCTTCTAA.......................................................................................................................................................................................................................................................................................................2716.006111003
GTCTGGGTTCGACAACTGCCTC...............................................................................................................................................................................................................................................................................................................................2216.006310002
............................................................................................................CTC-TTAA-A-GTTTGCTGGCAAAAACATAA..........................................................................................................................................................................................................2816.006600000
......................CGTTCTGGTGGCATTTGCTTCTAA.......................................................................................................................................................................................................................................................................................................2416.006401010
............................................AACTTTGGGGTCGATGCACT.....................................................................................................................................................................................................................................................................................2014.004020011
...................CTCCGTTCTGGTGGCATTTGCTTCT.........................................................................................................................................................................................................................................................................................................2514.004011020
.............................................ACTTTGGGGTCGATGCACTTGCTCCG..............................................................................................................................................................................................................................................................................2613.003200010
...................CTCCGTTCTGGTGGCATTTGCTTCTA........................................................................................................................................................................................................................................................................................................2613.003020010
..........................................................TGCACTTGCTCCGCTATTCGTCAGAG.................................................................................................................................................................................................................................................................2613.003210000
........................................................GATGCACTTGCTCCGCTATTCGTCAGA..................................................................................................................................................................................................................................................................2713.003030000
......................CGTTCTGGTGGCATTTGCTTCTA........................................................................................................................................................................................................................................................................................................2313.003300000
...........................................................GCACTTGCTCCGCTATTCGTCAGA..................................................................................................................................................................................................................................................................2413.003210000
..............................................CTTTGGGGTCGATGCACTTGCTCCG..............................................................................................................................................................................................................................................................................2513.003300000
..............................................................................................................C-TTAA-A-GTTTGCTGGCAAAAACATAA..........................................................................................................................................................................................................2612.002200000
.......................................................................................................................GTTTGCTGGCAAAAACATAA..........................................................................................................................................................................................................2012.002110000
........................................................GATGCACTTGCTCCGCTATTCGTCAGAG.................................................................................................................................................................................................................................................................2812.002110000
GTCTGGGTTCGACAACTGCCTCC..............................................................................................................................................................................................................................................................................................................................2312.002110000
..............................................CTTTGGGGTCGATGCACTTGCTCCGC.............................................................................................................................................................................................................................................................................2612.002110000
........................................................................................................GTTTCTC-TTAA-A-GTTTGCTGGC....................................................................................................................................................................................................................2212.002020000
GTCTGGGTTCGACAACTGCC.................................................................................................................................................................................................................................................................................................................................2012.002020000
............................................................CACTTGCTCCGCTATTCGTCAGA..................................................................................................................................................................................................................................................................2312.002200000
............................................AACTTTGGGGTCGATGCACTTG...................................................................................................................................................................................................................................................................................2212.002000020
...................................................................................................................................................................................................................................................................................................AAAGCTGCCTCGGTTAAGGA..............................2012.002010010
.............................................ACTTTGGGGTCGATGCACTTGCTCCGC.............................................................................................................................................................................................................................................................................2712.002200000
............................................AACTTTGGGGTCGATGCACTT....................................................................................................................................................................................................................................................................................2112.002020000
............................................................................................................CTC-TTAA-A-GTTTGCTGGC....................................................................................................................................................................................................................1812.002011000
..........................................................TGCACTTGCTCCGCTATTCGTCAGA..................................................................................................................................................................................................................................................................2512.002101000
.................................................................................................................TAA-A-GTTTGCTGGCAAAAACATAA..........................................................................................................................................................................................................2412.002000002
.....................................................................................................................................................................................................................................................................................................................GAGGCCTTGGAGATCCTGGTC...........2112.002010001
.......................................................................CTATTCGTCAGAGATTCTATAG........................................................................................................................................................................................................................................................2211.001100000
...............................................................TTGCTCCGCTATTCGTCAGAG.................................................................................................................................................................................................................................................................2111.001001000
.....................CCGTTCTGGTGGCATTTGCTTCTAA.......................................................................................................................................................................................................................................................................................................2511.001100000
....................TCCGTTCTGGTGGCATTTGCTTC..........................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................TC-TTAA-A-GTTTGCTGGCAAAAACATAA..........................................................................................................................................................................................................2711.001100000
...................CTCCGTTCTGGTGGCATT................................................................................................................................................................................................................................................................................................................1811.001010000
....................................................................CCGCTATTCGTCAGAGATTC.............................................................................................................................................................................................................................................................2011.001100000
......................................................................................................AGGTTTCTC-TTAA-A-GTTTGCTGGCAAAA................................................................................................................................................................................................................2811.001100000
................................................................TGCTCCGCTATTCGTCAGA..................................................................................................................................................................................................................................................................1911.001010000
............................................................CACTTGCTCCGCTATTCGTCAG...................................................................................................................................................................................................................................................................2211.001100000
.TCTGGGTTCGACAACTGCCTC...............................................................................................................................................................................................................................................................................................................................2111.001100000
......................CGTTCTGGTGGCATTTGCTTCC.........................................................................................................................................................................................................................................................................................................2211.001010000
.....................................TGCTTCTAACTTTGGGGTCGAT..........................................................................................................................................................................................................................................................................................2211.001000010
..................CCTCCGTTCTGGTGGCATTTGCTTC..........................................................................................................................................................................................................................................................................................................2511.001010000
...................................................................................GATTCTATAGTTAATTA--AGGTTT.........................................................................................................................................................................................................................................2311.001010000
....GGGTTCGACAACTGCCTCCGTTCTG........................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................TTCTC-TTAA-A-GTTTGCTGGC....................................................................................................................................................................................................................2011.001010000
.................GCCTCCGTTCTGGTGGCATTTGCTTCT.........................................................................................................................................................................................................................................................................................................2711.001100000
.......................................CTTCTAACTTTGGGGTCGATGCAC......................................................................................................................................................................................................................................................................................2411.001010000
.................................................................................................................TAA-A-GTTTGCTGGCAAAAAC..............................................................................................................................................................................................................2011.001000010
..................CCTCCGTTCTGGTGGCATTTGCTTCTA........................................................................................................................................................................................................................................................................................................2711.001100000
.........CGACAACTGCCTCCGTTCTGGTGGCATTT...............................................................................................................................................................................................................................................................................................................2911.001000001
........TCGACAACTGCCTCCGTTCTGGT......................................................................................................................................................................................................................................................................................................................2311.001100000
.....................CCGTTCTGGTGGCATTTGCTTCT.........................................................................................................................................................................................................................................................................................................2311.001100000
.............................................ACTTTGGGGTCGATGCACTTG...................................................................................................................................................................................................................................................................................2111.001001000
.............................................ACTTTGGGGTCGATGCACTTGCTCC...............................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................AA-A-GTTTGCTGGCAAAAACATAA..........................................................................................................................................................................................................2311.001100000
.....GGTTCGACAACTGCCTCCGTT...........................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................CTC-TTAA-A-GTTTGCTGGCAAAAACATA...........................................................................................................................................................................................................2711.001100000
............................................AACTTTGGGGTCGATGCAC......................................................................................................................................................................................................................................................................................1911.001010000
.............................................ACTTTGGGGTCGATGCACTT....................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................GATTCTATAGTTAATTA--AGGT...........................................................................................................................................................................................................................................2111.001010000
.....................................TGCTTCTAACTTTGGGGTCGA...........................................................................................................................................................................................................................................................................................2111.001100000
............................................AACTTTGGGGTCGATGCACTTGCTCC...............................................................................................................................................................................................................................................................................2611.001010000
...................CTCCGTTCTGGTGGCATTTGCTTCTAAC......................................................................................................................................................................................................................................................................................................2811.001010000
.......................GTTCTGGTGGCATTTGCTTCT.........................................................................................................................................................................................................................................................................................................2111.001010000
.......................GTTCTGGTGGCATTTGCTTCTA........................................................................................................................................................................................................................................................................................................2211.001100000
.................................CATTTGCTTCTAACTTTGGGGTC.............................................................................................................................................................................................................................................................................................2311.001010000
............................................................CACTTGCTCCGCTATTCGTCAGAGATTC.............................................................................................................................................................................................................................................................2811.001100000
........................TTCTGGTGGCATTTGCTTCTA........................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................CTATTCGTCAGAGATTCTAT..........................................................................................................................................................................................................................................................2011.001100000
.........................................................ATGCACTTGCTCCGCTATTCGTCAGA..................................................................................................................................................................................................................................................................2611.001010000
.........CGACAACTGCCTCCGTTCTGGTGGCATT................................................................................................................................................................................................................................................................................................................2811.001010000
..................................................................................................................AA-A-GTTTGCTGGCAAAAACA.............................................................................................................................................................................................................2011.001010000
..............................................CTTTGGGGTCGATGCACTTGCTCC...............................................................................................................................................................................................................................................................................2411.001010000
....................................TTGCTTCTAACTTTGGGGTCG............................................................................................................................................................................................................................................................................................2111.001000010
...................................................................................................A--AGGTTTCTC-TTAA-A-GTTTGC........................................................................................................................................................................................................................2111.001010000
......................CGTTCTGGTGGCATTTGCTT...........................................................................................................................................................................................................................................................................................................2011.001000010
................................................................................................................TTAA-A-GTTTGCTGGCAAAAACA.............................................................................................................................................................................................................2211.001010000
.............................................ACTTTGGGGTCGATGCACTTGCTC................................................................................................................................................................................................................................................................................2411.001000010
.................................................................................................................TAA-A-GTTTGCTGGCAAAAACA.............................................................................................................................................................................................................2111.001010000
.....................................................................................................................A-GTTTGCTGGCAAAAACATAA..........................................................................................................................................................................................................2111.001100000
............................................................................................................CTC-TTAA-A-GTTTGCTGGCAAAAAC..............................................................................................................................................................................................................2411.001100000
.........................................................................................................TTTCTC-TTAA-A-GTTTGCTG......................................................................................................................................................................................................................1911.001010000
......................CGTTCTGGTGGCATTTGCTTC..........................................................................................................................................................................................................................................................................................................2111.001010000
..............................................CTTTGGGGTCGATGCACTTG...................................................................................................................................................................................................................................................................................2011.001100000
..................................................GGGGTCGATGCACTTGCTC................................................................................................................................................................................................................................................................................1911.001010000
..............................................CTTTGGGGTCGATGCACTTGCT.................................................................................................................................................................................................................................................................................2211.001010000
..................................................................................................TA--AGGTTTCTC-TTAA-A-GTTTGCTGGC....................................................................................................................................................................................................................2611.001100000
.............AACTGCCTCCGTTCTGGTGGCATT................................................................................................................................................................................................................................................................................................................2411.001100000
GTCTGGGTTCGACAACTGCCT................................................................................................................................................................................................................................................................................................................................2111.001000010
...............................................TTTGGGGTCGATGCACTTGCTCCGC.............................................................................................................................................................................................................................................................................2511.001100000
..............................................CTTTGGGGTCGATGCACTTGCTC................................................................................................................................................................................................................................................................................2311.001010000
...................................................................................................................A-A-GTTTGCTGGCAAAAACATA...........................................................................................................................................................................................................2111.001000001
........................................................GATGCACTTGCTCCGCTATTCGT......................................................................................................................................................................................................................................................................2311.001100000
..............................................CTTTGGGGTCGATGCACT.....................................................................................................................................................................................................................................................................................1811.001100000
............................................AACTTTGGGGTCGATGCACTTGCTCCGCT............................................................................................................................................................................................................................................................................2911.001010000
droBip1
GACTGGGTTAGGTAGGTGCCTCCGTTCTGGTGGCATTTGCCTTTAACTTTGGGGCCGATC------CTCCGCTATTCATCGGAGATTCTGTGCTTAGATC--ACGTTTCTT-CTCA-C-ACATGCGGGCACAAACATTAA-TATA------------GT--------------------------------------T--AAGATCTGT-----TA-----------------------------GG---A--TTAGATAAT--AAT-TGTGT---AT-----CCTTGCAGAAAGCCGCTTCAGTCAAGGAGGCCTTGGAGATCCTGGTCGGCCGTGATCASizeHit CountTotal NormTotal
No Reads
dp5
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTT--AAACGCTGT---TTTTCTAATCCACAGAAAGCCGCTTCTGTCAAGGAAGCTCTAGAGATCCTGGTGGGTCGTGATCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................GCTCTAGAGATCCTGGTGGGTCGT.....2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................AGAGATCCTGGTGGGTCGTGAT..2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................AGCTCTAGAGATCCTGGT............1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................TCTAGAGATCCTGGTGGGT........1911.0010000100000
droPer2
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTT--AAACGCTGT---TTTTCTAAACCACAGAAAGCCGCTTCTGTCAAGGAAGCTCTAGAGATCCTGGTGGGTCGTGATCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---TT-----TCTTACAGAAAGCCGCTTCGGTTAAAGAAGCCTTAGAGATCCTTATTGGACGCGATCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................AGCCGCTTCGGTTAAAGAAGC...........................2111.00100010
..........................................................................................................................................................................................................................................................................................................................CTTAGAGATCCTTATTGGACGCGAT..2511.00100010
...........................................................................................................................................................................................................................................................................................................................TTAGAGATCCTTATTGGACGCGATC.2511.00100010
.......................................................................................................................................................................................................................................................................................................................AGCCTTAGAGATCCTTATTGGACGC.....2511.00100010
.......................................................................................................................................................................................................................................................................................................................AGCCTTAGAGATCCTTATTGG.........2111.00100001
.................................................................................................................................................................................................................................................................................................................TAAAGAAGCCTTAGAGATCCTTAT............2411.00101000
droVir3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAGCCGCCTCGGTGAAGGAGGCTCTTGAGATACTCGTTGGCCGTGATCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................CGGTGAAGGAGGCTCTTGAG....................2012.002000000000001010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CTTGAGATACTCGTTGGC........1811.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CTCTTGAGATACTCGTTGGCCG......2211.001000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CTTGAGATACTCGTTGGCCGT.....2111.001000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GAAGGAGGCTCTTGAGAT..................1811.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----CATTGCAGAAAGCGGCCTCGGTGAAGGAGGCTCTGGAGATACTCGTGGGTCGCGATCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------GT---TT-----GATTGCAGAAAGCCGCTTCGGTGAAGGAGGCTCTGGAGATACTCGTTGGTCGTGATCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................GGCTCTGGAGATACTCGTTGGTCGTG....2611.00110
..................................................................................................................................................................................................................................................................................................GAAAGCCGCTTCGGTGAAGGAG.............................2211.00101

Generated: 05/17/2015 at 11:06 PM