dse_951

CDS [Dsec\GM19274-cds]; exon [dsec_GLEANR_20869:2]; CDS [Dsec\GM19274-cds]; exon [dsec_GLEANR_20869:1]; intron [Dsec\GM19274-in]

Name	Class	Family	Strand
BARI1	DNA	TcMar-Tc1	+
BARI1	DNA	TcMar-Tc1	+
TC1_DM	DNA	TcMar-Tc1	+

##################################################---------------------------------------------------------------------------------------------------------------------------################################################## AGCCGGCGAAGGAACTGAAGAAGGAGCTCCAGATACAGAGGTGGTCAAAAGTATTTTCACTTTTCACATTTCACTCAAATGCACTTTGTGAAAATAATTTTGACCACCTCTGTAGATGCAAGCGTGGAAAAAGTTCGCAAACGCTTAAGACAAAACAACCTTAATGTGTGCAGTCCCAGAAAAGTCCCCAGCTTTTGACTGTGAAGCATGTGGCAAAGCGAAT *************************************************(((((((((......(((((.....)))))......))))))))).................************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V113 male body	M054 female body	V115 head	V114 embryo
............................CCAGTTACGGAGGTGGTCA................................................................................................................................................................................	19	2	1	1.00	1	1	0	0	0
..................................................................................................................................................................................GGCAAGTCCCCAGCTTTGGA.........................	20	3	6	0.17	1	0	1	0	0
.............................................................................................ATAATTTTGACCACCTCTGT..............................................................................................................	20	0	20	0.15	3	2	0	1	0
...........................................................................................................................................................CAACCTTAATGTGTGCAGTCC...............................................	21	0	20	0.10	2	0	1	1	0
............................................................................................AATAATTTTGACCACCTCTGT..............................................................................................................	21	0	20	0.10	2	1	0	1	0
...............................................................................TGCACTTTGTGAAAATAATTTTGACC......................................................................................................................	26	0	20	0.05	1	0	1	0	0
...................................................TATTTTCACTTTTCACATTTCACTCAA.................................................................................................................................................	27	0	20	0.05	1	0	1	0	0
..............................................................................................TAATTTTGACCACCTCTGTA.............................................................................................................	20	0	20	0.05	1	0	1	0	0
......................................................................................TGTGAAAATAATTTTGACCACC...................................................................................................................	22	0	20	0.05	1	0	1	0	0
......................................AGGTGGTCAAAAGTATTTT......................................................................................................................................................................	19	0	20	0.05	1	0	1	0	0
...................................................................ATTTCACTCAAATGCACTTTGT......................................................................................................................................	22	0	20	0.05	1	0	0	0	1
........................................................................................TGAAAATAATTTTGACCACCTC.................................................................................................................	22	0	20	0.05	1	0	1	0	0
....................................AGAGGTGGTCAAAAGTATTTT......................................................................................................................................................................	21	0	20	0.05	1	0	0	1	0
..........................................................................................AAAATAATTTTGACCACCTCT................................................................................................................	21	0	20	0.05	1	0	1	0	0
...................................................................ATTTCACTCAAATGCACTTTGTGAAA..................................................................................................................................	26	0	20	0.05	1	0	0	0	1
.........................................TGGTCAAAAGTATTTTCACTTT................................................................................................................................................................	22	0	20	0.05	1	0	0	1	0
......................................................................TCACTCAAATGCACTTTGTGAA...................................................................................................................................	22	0	20	0.05	1	0	1	0	0
..........................................................ACTTTTCACATTTCACTCAAATGC.............................................................................................................................................	24	0	20	0.05	1	0	1	0	0
.................................TACAGAGGTGGTCAAAAGT...........................................................................................................................................................................	19	0	20	0.05	1	0	0	1	0
................................ATACAGAGGTGGTCAAAAGTATT........................................................................................................................................................................	23	0	20	0.05	1	0	0	0	1

TCGGCCGCTTCCTTGACTTCTTCCTCGAGGTCTATGTCTCCACCAGTTTTCATAAAAGTGAAAAGTGTAAAGTGAGTTTACGTGAAACACTTTTATTAAAACTGGTGGAGACATCTACGTTCGCACCTTTTTCAAGCGTTTGCGAATTCTGTTTTGTTGGAATTACACACGTCAGGGTCTTTTCAGGGGTCGAAAACTGACACTTCGTACACCGTTTCGCTTA ************************************************************************************************************(((((((((......(((((.....)))))......))))))))).................*************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M054 female body	V113 male body	V114 embryo	V115 head
..........................................................................................TTTTATTAAAACTGGTGGAGAC...............................................................................................................	22	0	20	0.10	2	1	1	0	0
....................................TCTCCACCAGTTTTCATAAA.......................................................................................................................................................................	20	0	20	0.10	2	2	0	0	0
...................................TTCTCCACCAGTTTTCATAAAAC.....................................................................................................................................................................	23	2	20	0.05	1	1	0	0	0
......................................................................................ACACTTTTATTAAAACTGGT.....................................................................................................................	20	0	20	0.05	1	1	0	0	0
........................................................AGTGAAAAGTGTAAAGTGAGTTTA...............................................................................................................................................	24	0	20	0.05	1	0	0	0	1
.......................................CCACCAGTTTTCATGAAAGTGA..................................................................................................................................................................	22	1	20	0.05	1	1	0	0	0
..................................TGTCTCCACCAGTTTTCATA.........................................................................................................................................................................	20	0	20	0.05	1	1	0	0	0
...................................................................TAAAGTGAGTTTACGTGAACA.......................................................................................................................................	21	2	20	0.05	1	0	0	0	1
...........................................................GAAAAGTGTAAAGGGAGTG.................................................................................................................................................	19	2	20	0.05	1	1	0	0	0
.............................................................AAAGTTTAAAGTGAGTTTA...............................................................................................................................................	19	1	20	0.05	1	1	0	0	0
..............................................................................TACGTGAAACACTTTTAT...............................................................................................................................	18	0	20	0.05	1	1	0	0	0
..........................................................TGAAAAGTGTAAAGTGAGTTTA...............................................................................................................................................	22	0	20	0.05	1	0	1	0	0
................................................................................................TGAAACCGGTGGAGACAT.............................................................................................................	18	2	20	0.05	1	0	0	1	0
.........................................................GTGAAAAGTGTAAAGTGA....................................................................................................................................................	18	0	20	0.05	1	0	0	1	0

Species	Coordinate	ID	Alignment
droSec2	scaffold_1987:556-778 +	dse_951	AGCCGGCGAAGGAACTGAAGAAGGA--GCTCCAGATACAGAGGTGGTCAAAAGTATTTTCACTTTTCACATTTCACTCAAATGCACTTTGTGAAAATAATTTTGACCACCTCTGTAGA--------------------------TGCAA----------------------GCG-TGGAAAAAGTTCGCAAACGC-TTAAGACAAAACAACCTTAAT---GTG-TGC-AG-T-CCCAGAAAAGTCCCCAGCTTTTGACTGTGAAGCATGTGGCAAAG-CGAAT-
droSim2	2r:1471131-1471353 -		GATTTATAT-----------------------------------GATTCAAGGCATCATGGATCAGCACATTTACACAGATATC-----CCGGAAAATGTGATGGCGCCATATGCCGAGGATGAAATGCCGATTTTTTTGGACATTTCAACAGGATAACGACTCAAAACACACGAGGAAGAAGGCTCGAAAGTGG-TTTGAGCAGAAATCGATCCGA---GTAATGA-AA-TGGCCTGCTCAGTCACCCGACTTGAATCC--------------AATCGAAAA-
dm3	chr4:971157-971378 -		GATCCATTG-----------------------------------GATTCAAGGCATCATGGATCAGCACATTTACACAGATATC-----CTGAAAAATGTGATGCTGCCATATGACGAGGATGAAATGCCG-TTGGTTTGGACATTTCAACAGGATAACGATCCAAAACACACGAGCAAGAAAGCTCGAAAGTGG-TTTGAGCAGAAATCGATCCGA---GTAATGA-AA-TGGCCTGCTCAGTCACCCGAATTGAATCC--------------AATCGAAAA-
droEre2	scaffold_4512:222917-223138 -		GATCCATTG-----------------------------------GATTCAAAGCATCATGGATCAGCACATTTACACAGATATC-----CTGGAAAATGTGATGCTGCCATATGCCGAGGATGAAATGCCG-TTGGTTTGGACATTTCAATAAGGTAACGACCCAAAACACACGAGCAAGAAAGCTCGAAAGTAG-TTTGAGCAGAAATCGATCAGA---GTAATGA-AA-TGGTCTGCTCAGTCACCCGACTTGAATCC--------------AATCGAAAA-
droYak3	X:21278334-21278574 -		GTTCCATGGAGTA--TGGAGTAGGTCCGTTC-------------CATTCAAGGCATCATGGATCAGCACATTTACACAGATATC-----CTGGAAAATGTGATGCTCCCATAAGCCGAGAATGAAATGCCG-TATGTTTGGACATTTCAACAAGATAACGTTCCAAAACACACGAGCAAGAAAGCTCGAAAGTGG-TTTGAGTAGAAATCGATCCGA---ATAATGA-AA-TGGCCTGCTAAGTCACCCGACTTGAATCC--------------AATCGAA-A-
droEug1	scf7180000408744:19351-19572 -		GATTCATCG-----------------------------------CATTGATGGAATAATGGACAGATTCGTATACAGAGACTTA-----TTGGAGACAGTGATGCTGCCATATGCTGAGGATAATATGCCA-ATTTTATGGAAGTTCCAGCAGGATAACGACCCAAAACACGCCTCTCTACTAGTCAGGGAGTGG-TTTCGTGAGCAAAATGTGGAT---GTTCTGG-AA-TGGCCGAGTCAATCCCCTGACCTTAATCC--------------CATCGAAAA-
droBia1	scf7180000297407:1959-2173 -		ACTTTATTG-----------------------------------GATACAAGGCAATATGTGTGCTACAGACTATGTAAACATA-----ATGAAGAAGGTTATGTTA-CATATGCCGAAGATGAAATGCCT-TTAACGTTGGAATTTATGCAGGATAATGATCCCAAACACACATCGAAGCTGGCGAAAAATTGG-TTCCAGGACAAT------AAA---GTTATGG-AT-TGGCCAGCTCAGTCACCCGACTTAAACCC--------------CATTGAGCA-
droTak1	scf7180000415413:9066-9287 -		TATTCACTG-----------------------------------GATTAGACCCATCAGGGATCAACATGTCTACGTCGATATT-----TTAGAAACTGTTATGCTACCATATGCGGAGTTCGAAATGCCT-TTGTTTTGGGTGTTTCAGCAAGACAACGACCCAAAGCATACGAGCAGGAAAGCTCGATCGTGG-TTTGAGACCAACAATGTAAAC---GTCTTGG-AG-TGGCCCGCACAGTCGCCAGACTTAAATCC--------------GATTGAAAA-
droEle1	scf7180000490154:23318-23540 -		AATACATTG-----------------------------------GATAAAAGGTATTATTGATCAACATGTCTATTGCGATATT-----TTGCAATCAGTGATGCTGCCTTGTGCAGAATACGAAATGCCG-TTGTTGTGTGTCTCCCAACATGATAACAACCCTAAACATACCAGCAAGAAAGCTCGCAAGTGG-TTTCAAGACAGATCCCTTCAC---CTAATGG-AATGGATCCCTTCAGTCTCCAGACTTAAGCCC--------------GATAGAGAA-
droRho1	scf7180000775067:58209-58430 -		CATACATAT-----------------------------------GATCGATGGGATCATGGAGCAATATACATATGCACAAATA-----CTTAAAACTGTCATGCAGTCGTATGCTGAGAAAGAGATGCCT-TTAATTTGGACATTTCAGCTGGACAATGATCCTAAACATACCAGCAAGGTGGCCAGGGAGGGG-TTTATTAAAGAAAAAGTTGAT---GAAATGC-TA-TGGCCAGCACAGTCCCCGGATTTAAATCC--------------GATTGAAAA-
droFic1	scf7180000452569:3487-3708 -		GATACATTG-----------------------------------GATCAAGACCATCATGGATCAGCACGTTTATGTGGATATC-----ATGGAGACTATTATGTTACCTTTCGCAGAATACGAAATGCCA-CTCGTGTGGGTCTTTCAACAAGATAATGACCCAAAACATACCAGCAAGAAGGCAAAGAAGTGG-TTTGGGGACAACTCTGTAAAC---GTTATGG-AG-TGGCCTCCGCAGTCTCCAGACCTTAATCC--------------TATAGAGAA-
droKik1	scf7180000302390:724058-724279 -		AATACATTG-----------------------------------GATAAAAGGTATTATGGATCAGCACGTCTATTGCGATATT-----TTGCTAACAGTGATGCTGTCTTATGCAGAATACGAAATACCG-TTGTTGTGGGTCTTCCAACAGGATAACGACCCTAAACATACCAGCAAGAAAGCTCCTAAGTGG-TTTCAAGACAGATCCCTTCAC---CTAATGG-AT-TGGCCTGCTCAGTCTCCAGACTTAAACCC--------------GATAGAGAA-
droAna3	scaffold_12647:1703-1924 -		TATACACTG-----------------------------------GATAAAATCTATAATGGATCAACACGTCTATATGGATATT-----TTGCAATCTGTAATGTTACCCTTCGCAGAAGATGATATGCCT-CTTATTTGGGTCTTCCAGCAGGATAATGACCCAAAACACACAAGCAAAAAGGCAAAGGAGTGG-TTCCTCAACAATGCTGTACAA---GTTTTGG-AG-TGGCCTGCGCAGTCGCCGGATCTAAATCC--------------AATTGAAAA-
droBip1	scf7180000396371:91837-92047 -		AATA----------------------------------------------TGGTATAATGGATCGACTCGTATACTCCGAAATC-----TTGAAAAACGTCATGCTGCCTATTGCTGAGGATGAAATGCAA-TTGTTATGGGTCTTCCAACAGGATAATGACCCAAAGCATACCAGCAATAAAGCTCGAAAGTGG-TAAGAAGACAGATCTCTCCAT---GTAATGG-AT-TGGCTAGCTCAGTCCCCAGACCTAAATCC--------------TATGGAAAA-
dp5	3:2051719-2051940 -		AATACATGG-----------------------------------CA-CAACCCCATTATGGATCAACATGTCTATGTCAATATC-----AAAGAAACAGTGATTCTGCTTTATGCAGAATACGAAATAGAG-TTGTTTTGTGTCTTCCAGCAGGAAAATGACCCAAAACGAACTAGAAAGAAAGCTCGAAAGTGG-TTCGAGCACAATTCACTTAGT---GCAATAG-AT-TGGCCTGTTCAGTCTCCAGACTTTAACCC--------------CATTGCTAAT
droPer2	scaffold_1:4047366-4047588 -		AATACATGG-----------------------------------CA-CAACCCCATTATGGATCATCATGTCTATGTCAATATC-----AAAGAAACAGTGATTCTGCTTTATGCAGAATACGAAATAGAG-TTGTTTTGTAACTTCCATCAGGAAAATCACCCAAAACGAACTAGAAAGAAAGCTCGAAAGTGGGTTCGAGCACAATTCTCTTAGT---GCAATGGGAT-TGGCCTGTTCAGTCTCCAGACTTGAACCC--------------CATTGCTAA-
droWil2	scf2_1100000004963:372671-372892 -		GATTCATTG-----------------------------------GATTAAGACGATCATGGATCAGCACGTCTACGTTGAAATC-----CTGCAAAATATAATGCTACCACATGCAGAGGATGAAATGCCA-TTAGTTTGGGTCTTCCAGCAGGACAATGACCCCAAGCACACGAGCAAGAAAGCGGAAAAGTGG-TTTGCAGACAACACCATCAAC---GTCATGG-AA-TGGCCTCCATAGTCCCCGGGTCTCAATCC--------------AATTGAGAA-
droVir3	scaffold_13036:934533-934753 -		AATACATTG-----------------------------------GAG-AAAACCATCATGGATCAGCACGTGTATGTGAATATC-----ATGGAGACAGTTATGCTACCCTTTGTAGAATACGAAATGCCC-CACGTACGGGTCTTTCAACAGGACAATGACCCCAAACACACCAGCAAGAAAGCAAAGCAGTGG-TTCAGGGCAAACTCTGGCAAC---GTTTTGG-AG-TGGCCTACTGAGTCGCCTGACCTGAATTC--------------CATCGAAAA-
droMoj3	scaffold_6680:16018968-16019189 -		GATTCATCG-----------------------------------AATTAACGGCATCATGGATAGATTCCTGTATAAGGATATA-----TTGAATAGTGTTATGCTACCATATGCCGACGACAACATGCCT-CTGAAATGGAAATTTCAACAGGATAACGATCCTAAACACTGCTCCCGAGTAGTTAAGGGTTGG-TTGCATGAAAATAGAATTGAC---GTTATTG-AG-TGGCCAAGTCAGTCTCCAGATCTCAATCC--------------GATTGAGAA-
droGri2	scaffold_14978:467947-468132 -		GATGCATAG-----------------------------------GACTAAAACAATTATGGATCATCACTTTTGATTGGAAAA----------------------------TTGTATTTGATGTAATGCCT-TTATTATGGGTCTTCCAACAGGACAAG----------------GCAAAAGAGCTCGGAAATGG-ATTGAGTACCATTTGTTTGACCTGATTTTGG-AC-TGACGTCCACAGTCCTTATATTAAAACAC--------------ACTCCATAA-

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSec2

AGCCGGCGAAGGAACTGAAGAAGGA--GCTCCAGATACAGAGGTGGTCAAAAGTATTTTCACTTTTCACATTTCACTCAAATGCACTTTGTGAAAATAATTTTGACCACCTCTGTAGA--------------------------TGCAA----------------------GCG-TGGAAAAAGTTCGCAAACGC-TTAAGACAAAACAACCTTAAT---GTG-TGC-AG-T-CCCAGAAAAGTCCCCAGCTTTTGACTGTGAAGCATGTGGCAAAG-CGAAT-	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...............................................................................................ATAATTTTGACCACCTCTGT.........................................................................................................................................................................	20	20	0.15	3	0	2	0	1
...............................................................................................................................................................................................................CAACCTTAAT---GTG-TGC-AG-T-CC.................................................	21	20	0.10	2	1	0	0	1
..............................................................................................AATAATTTTGACCACCTCTGT.........................................................................................................................................................................	21	20	0.10	2	0	1	0	1
.................................................................................TGCACTTTGTGAAAATAATTTTGACC.................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.....................................................TATTTTCACTTTTCACATTTCACTCAA............................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0
................................................................................................TAATTTTGACCACCTCTGTA........................................................................................................................................................................	20	20	0.05	1	1	0	0	0
........................................................................................TGTGAAAATAATTTTGACCACC..............................................................................................................................................................................	22	20	0.05	1	1	0	0	0
........................................AGGTGGTCAAAAGTATTTT.................................................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0
.....................................................................ATTTCACTCAAATGCACTTTGT.................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0
..........................................................................................TGAAAATAATTTTGACCACCTC............................................................................................................................................................................	22	20	0.05	1	1	0	0	0
......................................AGAGGTGGTCAAAAGTATTTT.................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1
............................................................................................AAAATAATTTTGACCACCTCT...........................................................................................................................................................................	21	20	0.05	1	1	0	0	0
.....................................................................ATTTCACTCAAATGCACTTTGTGAAA.............................................................................................................................................................................................	26	20	0.05	1	0	0	1	0
...........................................TGGTCAAAAGTATTTTCACTTT...........................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	1
........................................................................TCACTCAAATGCACTTTGTGAA..............................................................................................................................................................................................	22	20	0.05	1	1	0	0	0
............................................................ACTTTTCACATTTCACTCAAATGC........................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
...................................TACAGAGGTGGTCAAAAGT......................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	1
..................................ATACAGAGGTGGTCAAAAGTATT...................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0

droSim2

GATTTATAT-----------------------------------GATTCAAGGCATCATGGATCAGCACATTTACACAGATATC-----CCGGAAAATGTGATGGCGCCATATGCCGAGGATGAAATGCCGATTTTTTTGGACATTTCAACAGGATAACGACTCAAAACACACGAGGAAGAAGGCTCGAAAGTGG-TTTGAGCAGAAATCGATCCGA---GTAATGA-AA-TGGCCTGCTCAGTCACCCGACTTGAATCC--------------AATCGAAAA-	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAA............................................................	25	14	92.29	1292	0	0	0	0	0	0	377	3	847	50	0	0	15	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GT..............................................................	23	16	74.50	1192	0	0	0	0	0	0	802	4	367	18	0	0	1	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAAAACACAC...............................................................................................................	26	1	40.00	40	0	0	0	0	0	0	33	0	7	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTA.............................................................	24	16	34.06	545	0	0	0	0	0	0	218	0	310	10	0	0	7	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAAAACACACGA.............................................................................................................	28	1	27.00	27	0	0	0	0	0	0	14	0	12	1	0	0	0	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAAAACAC.................................................................................................................	24	1	24.00	24	0	0	0	0	0	0	22	0	1	0	0	0	1	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAG............................................................................................................	26	1	14.00	14	0	2	0	0	0	0	0	11	1	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGA.............................................................................................................	25	1	13.00	13	0	0	0	2	0	0	0	9	0	2	0	0	0	0	0	0	0
........................................................................................................................................TTTGGACATTTCAACAGGATAACGAC..........................................................................................................................	26	10	12.40	124	0	0	1	0	0	0	52	1	57	6	0	0	7	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAAAACACA................................................................................................................	25	1	11.00	11	0	0	0	0	0	0	5	0	6	0	0	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATGTGA......................................................................................................................................................................................	26	3	11.00	33	0	0	0	0	0	0	7	6	17	2	1	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATGTGAT.....................................................................................................................................................................................	27	3	10.33	31	0	0	0	0	0	0	10	0	21	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGGA..........................................................................................................	28	1	10.00	10	0	4	1	2	0	0	1	2	0	0	0	0	0	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGCACA......................................................................................................................................................................................................................	24	14	9.86	138	0	0	0	0	0	0	25	2	103	8	0	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTAAT...........................................................	24	14	9.57	134	0	0	0	2	0	0	80	40	5	3	4	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATG.........................................................................................................................................................................................	23	5	9.40	47	0	0	0	0	0	0	20	10	13	3	0	0	1	0	0	0	0
......................................................................................................................................TTTTTGGACATTTCAACAGGATAACGAC..........................................................................................................................	28	6	9.17	55	0	0	0	0	0	0	23	1	28	3	0	0	0	0	0	0	0
.....................................................................................................................................TTTTTTGGACATTTCAACAGGATAACGA...........................................................................................................................	28	6	7.33	44	0	0	0	0	0	0	10	2	28	4	0	0	0	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAAAACA..................................................................................................................	23	1	7.00	7	0	0	0	0	0	0	2	0	4	0	1	0	0	0	0	0	0
.................................................................................................TGTGATGGCGCCATATGCCGAGGA...................................................................................................................................................................	24	8	6.25	50	0	0	0	2	0	0	20	3	5	2	18	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACG..............................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0
....................................................................CATTTACACAGATATC-----CCGGAAAA...........................................................................................................................................................................................	24	5	5.80	29	0	0	0	0	18	0	4	0	3	0	4	0	0	0	0	0	0
.....................................................................................................................................TTTTTTGGACATTTCAACAGGATAACGAC..........................................................................................................................	29	6	5.67	34	0	0	0	0	0	0	15	1	18	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTAATGA-........................................................	26	14	5.64	79	0	0	0	1	0	0	16	11	43	6	2	0	0	0	0	0	0
......................................................................................................................................TTTTTGGACATTTCAACAGGATAACGA...........................................................................................................................	27	6	5.33	32	0	0	0	0	0	0	8	0	15	8	0	0	1	0	0	0	0
.........................................................................................................................................................................................................GCAGAAATCGATCCGA---GTAATGA-AA-.....................................................	25	13	5.08	66	0	0	0	0	0	0	6	27	22	11	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTAA............................................................	24	14	5.00	70	0	0	0	0	0	0	30	2	35	1	1	0	1	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGCACATT....................................................................................................................................................................................................................	26	13	4.62	60	0	0	0	1	0	0	6	1	47	4	1	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAATGA-........................................................	28	14	4.29	60	0	0	0	0	0	0	24	1	34	1	0	0	0	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGCACAT.....................................................................................................................................................................................................................	25	14	4.29	60	0	0	0	0	0	0	7	0	46	7	0	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATGT........................................................................................................................................................................................	24	5	4.00	20	0	0	0	0	0	0	6	6	5	1	2	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACAC...............................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAAAACACACG..............................................................................................................	27	1	4.00	4	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTAA............................................................	23	14	3.93	55	0	0	0	0	0	0	26	16	7	0	6	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAAT...........................................................	26	14	3.93	55	0	0	0	0	0	0	29	0	25	1	0	0	0	0	0	0	0
......................................................................................................TGGCGCCATATGCCGAGGATGAAA..............................................................................................................................................................	24	8	3.88	31	0	0	0	0	17	0	1	0	5	2	6	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTAATG..........................................................	25	14	3.29	46	0	0	0	0	0	0	7	8	2	1	28	0	0	0	0	0	0
.......................................................TCATGGATCAGCACATTTACACAGA............................................................................................................................................................................................................	25	10	3.20	32	0	0	0	0	0	0	11	0	21	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTAATGA-AA-.....................................................	28	13	3.00	39	0	0	0	0	0	9	8	7	15	0	0	0	0	0	0	0	0
.............................................................................................................................................................................GAGGAAGAAGGCTCGAAAGTGG-TT......................................................................................	24	7	2.86	20	0	0	0	0	0	0	0	0	9	0	0	0	11	0	0	0	0
.......................................................................................................................................TTTTGGACATTTCAACAGGATAACGAC..........................................................................................................................	27	7	2.86	20	0	0	0	0	0	0	9	0	8	0	0	0	3	0	0	0	0
.........................................................................................................................................................................................................GCAGAAATCGATCCGA---GTAATG..........................................................	22	15	2.73	41	0	0	0	0	34	0	0	2	2	1	2	0	0	0	0	0	0
.........................................................................................................................................................................................TCGAAAGTGG-TTTGAGCAGAAATCGA........................................................................	26	20	2.70	54	0	0	0	0	0	0	11	4	31	5	1	0	2	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---G...............................................................	20	18	2.22	40	0	0	0	0	38	0	0	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................TTTTTTGGACATTTCAACAGGATAACG............................................................................................................................	27	6	2.17	13	0	0	0	0	0	0	0	0	9	2	1	0	1	0	0	0	0
.......................................................................................................................................TTTTGGACATTTCAACAGGATAACGA...........................................................................................................................	26	7	2.14	15	0	0	0	0	0	0	4	0	10	0	0	0	1	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGT.............................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGGG..........................................................................................................	28	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................TTTTTGGACATTTCAACAGGATAACG............................................................................................................................	26	6	2.00	12	0	0	0	0	0	0	4	0	5	1	0	0	2	0	0	0	0
....................................................................CATTTACACAGATATC-----CCGGA..............................................................................................................................................................................................	21	5	2.00	10	0	0	0	0	9	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAATG..........................................................	27	14	2.00	28	0	0	0	0	0	0	13	0	12	2	0	0	1	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAT............................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
........................................................................................................................................TTTGGACATTTCAACAGGATAACGA...........................................................................................................................	25	10	1.90	19	0	0	0	0	0	0	7	0	9	0	0	0	3	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTAATGA-T.......................................................	27	14	1.86	26	0	0	0	0	0	0	10	2	13	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................TCGAAAGTGG-TTTGAGCAGAAATCGATC......................................................................	28	20	1.85	37	0	0	0	0	0	0	6	1	25	4	0	0	1	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAAT..........................................................................................................................................................................................	22	5	1.80	9	0	0	0	0	0	0	0	5	3	1	0	0	0	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGCA........................................................................................................................................................................................................................	22	14	1.79	25	0	0	0	2	0	0	5	0	13	1	4	0	0	0	0	0	0
.................................................................................................................................................................................AAGAAGGCTCGAAAGTGG-TTTGAGC.................................................................................	25	8	1.75	14	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0
............................................................................................................................................................................CGAGGAAGAAGGCTCGAAAGTGG-TT......................................................................................	25	7	1.71	12	0	0	0	0	0	0	0	0	3	0	0	0	9	0	0	0	0
.........................................................................................................................................TTGGACATTTCAACAGGATAACGAC..........................................................................................................................	25	11	1.64	18	0	0	2	0	0	0	6	0	8	1	0	0	1	0	0	0	0
..................................................................................................................................................................................AGAAGGCTCGAAAGTGG-TTTGAGC.................................................................................	24	8	1.63	13	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAA...........................................................................................................................................................................................	21	5	1.60	8	0	0	0	0	0	0	1	2	4	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAATGA-AA-.....................................................	30	13	1.46	19	0	0	0	0	0	0	8	0	11	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CACGAGGAAGAAGGCTCGAAAGTGG-T.......................................................................................	26	7	1.43	10	0	0	1	0	0	0	2	1	4	1	1	0	0	0	0	0	0
........................................................................TACACAGATATC-----CCGGAAAATGTGAT.....................................................................................................................................................................................	26	5	1.40	7	0	0	0	0	0	0	3	1	1	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GT..............................................................	22	16	1.38	22	0	0	0	0	0	0	18	1	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAATGA-T.......................................................	29	14	1.36	19	0	0	0	0	0	0	8	0	11	0	0	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATGTGAA.....................................................................................................................................................................................	27	3	1.33	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................TTTTTTTGGACATTTCAACAGGATAACG............................................................................................................................	28	6	1.33	8	0	0	0	0	0	0	3	0	4	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................GCAGAAATCGATCCGA---GTAATGA-........................................................	23	15	1.33	20	0	0	0	0	0	0	4	4	7	5	0	0	0	0	0	0	0
................................................................................................................................................................................................TGG-TTTGAGCAGAAATCGATCCGA---GTAA............................................................	28	13	1.31	17	0	0	0	0	0	0	3	0	11	3	0	0	0	0	0	0	0
......................................................................................................TGGCGCCATATGCCGAGGATGAAAT.............................................................................................................................................................	25	8	1.25	10	0	0	0	0	0	0	0	1	0	0	8	0	1	0	0	0	0
......................................................................................................................................TTTTTGGACATTTCAACAGGATAAC.............................................................................................................................	25	6	1.17	7	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0
....................................................................................................................................TTTTTTTGGACATTTCAACAGGATAACGA...........................................................................................................................	29	6	1.17	7	0	0	0	0	0	0	3	0	4	0	0	0	0	0	0	0	0
......TAT-----------------------------------GATTCAAGGCATCATGGAT.............................................................................................................................................................................................................................	22	13	1.15	15	0	0	0	0	0	0	2	0	11	1	1	0	0	0	0	0	0
..........................................................................................................................................................................CACGAGGAAGAAGGCTCGAAAGTGG-........................................................................................	25	7	1.14	8	0	0	0	0	0	0	1	0	7	0	0	0	0	0	0	0	0
............................................................................................................................................................................CGAGGAAGAAGGCTCGAAAGTGG-T.......................................................................................	24	7	1.14	8	0	0	0	0	0	0	0	0	1	2	3	0	2	0	0	0	0
..........................................................................................................................................................................CACGAGGAAGAAGGCTCGAAAGTGG-TT......................................................................................	27	7	1.14	8	0	0	1	0	0	0	0	0	7	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTAATGA-T.......................................................	28	14	1.07	15	0	0	0	0	0	0	2	0	13	0	0	0	0	0	0	0	0
.................................................................................................................................................TTCAACAGGATAACGACTCAAAACA..................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................GAGGAAGAAGGCTCGAAAGTGG-........................................................................................	22	7	1.00	7	0	0	0	0	0	0	1	0	2	2	0	0	2	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGGC..........................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................TGCCGATTTTTTTGGACATTTCAATT....................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTTTTTTGGACATTTCAACAGGATAACGAC..........................................................................................................................	30	6	1.00	6	0	0	0	0	0	0	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGGTT.........................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAAC...................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACT.........................................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGG...........................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGGAC.........................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGGATAACGACTCAAAACACACGAGGA..........................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGGT..........................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGATAACGACTCAAAACACACGAGGTCC........................................................................................................	30	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................GAGGATGAAATGCCGATTTTTTTGGA..............................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCAAAACACACGAGGAAGAAGGC...................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---G...............................................................	22	18	1.00	18	0	0	0	0	0	0	4	0	7	2	0	0	5	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATT.........................................................................................................................................................................................	23	5	1.00	5	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0
...TTATAT-----------------------------------GATTCAAGGCATCATGGATC............................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..............................................................TCAGCACATTTACACAGATATC-----CCGGAAAA...........................................................................................................................................................................................	30	4	1.00	4	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTTTTTGGACATTTCAACAGGATAAC.............................................................................................................................	26	6	1.00	6	0	0	0	0	0	0	1	0	5	0	0	0	0	0	0	0	0
..............................................................................................................................TGCCGATTTTTTTGGACATTTCAACA....................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................CGCCATATGCCGAGGATGAAATGCCGA........................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAA......................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................CAACAGGATAACGACTCAAAACACACGAGG...........................................................................................................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCAAAACACACGAGGAAGAAGGCTCGA...............................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................TTTGGACATTTCAACAGGATAACGACTC........................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AGAAGGCTCGAAAGTGG-TTTGAGCAGA..............................................................................	27	8	1.00	8	0	0	0	0	0	0	2	0	4	0	2	0	0	0	0	0	0
....................................................................................................................................................AACAGGATAACGACTCAAAACACA................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GT..............................................................	21	16	1.00	16	0	0	0	0	0	0	9	3	3	0	1	0	0	0	0	0	0
....................................................................................................................GAGGATGAAATGCCGATTTTTTTGGAC.............................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTA.............................................................	23	16	0.94	15	0	0	0	0	0	0	12	1	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTA.............................................................	22	16	0.94	15	0	0	0	0	0	0	8	4	2	1	0	0	0	0	0	0	0
...............................................TCAAGGCATCATGGATCAGCACA......................................................................................................................................................................................................................	23	14	0.86	12	0	0	0	0	0	0	1	0	11	0	0	0	0	0	0	0	0
..............................................................................................................................................................................AGGAAGAAGGCTCGAAAGTGG-TT......................................................................................	23	7	0.86	6	0	0	0	0	0	0	0	0	2	0	0	0	4	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTAATGA-AA-.....................................................	29	13	0.85	11	0	0	0	0	0	0	3	1	7	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................G-TTTGAGCAGAAATCGATCCGA---GT..............................................................	24	16	0.81	13	0	0	0	0	0	0	6	1	6	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TGG-TTTGAGCAGAAATCGATCCGA---GT..............................................................	26	15	0.80	12	0	0	0	0	0	0	1	0	10	1	0	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGA..............................................................................................................................................................................................	18	5	0.80	4	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0
..............................................................TCAGCACATTTACACAGATATC-----CCGGAA.............................................................................................................................................................................................	28	4	0.75	3	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0
...................................................GGCATCATGGATCAGCACATTTACACAGA............................................................................................................................................................................................................	29	8	0.75	6	0	0	0	0	0	0	2	0	4	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TCGAAAGTGG-TTTGAGCAGAAATCGAT.......................................................................	27	20	0.75	15	0	0	0	0	0	0	3	0	9	1	1	0	1	0	0	0	0
................................................................................................................................................................................................................TCGATCCGA---GTAATGA-AA-TGGCCTGC.............................................	26	11	0.73	8	0	0	0	0	0	0	2	2	2	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................ATCGATCCGA---GTAATGA-AA-TGGCCTGC.............................................	27	11	0.73	8	0	0	0	0	0	0	0	2	5	0	0	0	1	0	0	0	0
..............................................................................................................................................................................AGGAAGAAGGCTCGAAAGTGG-........................................................................................	21	7	0.71	5	0	0	0	0	0	0	1	0	2	0	0	0	1	1	0	0	0
.......................................................................................................................................TTTTGGACATTTCAACAGGATAACG............................................................................................................................	25	7	0.71	5	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................TCAGTCACCCGACTTGAATCC--------------AATCGAAA..	29	10	0.70	7	0	0	0	0	0	0	0	0	3	1	0	0	3	0	0	0	0
...............................................................................................................................................................................................................................................TCAGTCACCCGACTTGAATCC--------------AATCGA....	27	10	0.70	7	0	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0
....................................................................................................................................TTTTTTTGGACATTTCAACAGGATAAC.............................................................................................................................	27	6	0.67	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................TTTTTTGGACATTTCAACAGGATAA..............................................................................................................................	25	6	0.67	4	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0
..................................................................................................................................................................................AGAAGGCTCGAAAGTGG-TTTGAGCA................................................................................	25	8	0.63	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
....................................................................CATTTACACAGATATC-----CCGGAAAATGT........................................................................................................................................................................................	27	5	0.60	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.......................................................TCATGGATCAGCACATTTACACAGATA..........................................................................................................................................................................................................	27	10	0.60	6	0	0	0	0	0	0	1	0	5	0	0	0	0	0	0	0	0
...................................................................ACATTTACACAGATATC-----CCGGAAAA...........................................................................................................................................................................................	25	5	0.60	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
..............................................................................GATATC-----CCGGAAAATGT........................................................................................................................................................................................	17	10	0.60	6	0	0	0	0	0	0	0	1	2	0	3	0	0	0	0	0	0
................................................................AGCACATTTACACAGATATC-----CCGGAAAA...........................................................................................................................................................................................	28	5	0.60	3	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0
....................................................................CATTTACACAGATATC-----CCGGAAA............................................................................................................................................................................................	23	5	0.60	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAAA...........................................................	26	14	0.57	8	0	0	0	0	0	0	1	0	5	1	0	0	1	0	0	0	0
...............................................TCAAGGCATCATGGATCAGCACAT.....................................................................................................................................................................................................................	24	14	0.57	8	0	0	0	0	0	0	2	0	6	0	0	0	0	0	0	0	0
.......................................................................................................................................TTTTGGACATTTCAACAGGATAAC.............................................................................................................................	24	7	0.57	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................AGGAAGAAGGCTCGAAAGTGG-T.......................................................................................	22	7	0.57	4	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0
.............................................................................................................................................................................GAGGAAGAAGGCTCGAAAGTGG-T.......................................................................................	23	7	0.57	4	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0
........................................................................................................................................................................................................AGCAGAAATCGATCCGA---GTAATGA-T.......................................................	25	14	0.57	8	0	0	0	0	0	0	5	0	3	0	0	0	0	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGC.........................................................................................................................................................................................................................	21	14	0.57	8	0	0	0	0	0	0	6	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................................................GAGGAAGAAGGCTCGAAAGTGG-TTTG....................................................................................	26	7	0.57	4	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0
................................................................................TATC-----CCGGAAAATGTGATGGCGCCA..............................................................................................................................................................................	25	9	0.56	5	0	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	0
................................................................................TATC-----CCGGAAAATGTGATGGCGCCATA............................................................................................................................................................................	27	8	0.50	4	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0
........................................................................................................................................................................CACACGAGGAAGAAGGCTCGAAAGTGG-........................................................................................	27	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTAAA...........................................................	25	14	0.50	7	0	0	0	0	0	0	2	1	3	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTAATGA-........................................................	27	14	0.50	7	0	0	0	0	0	0	2	1	4	0	0	0	0	0	0	0	0
..................................................................................TC-----CCGGAAAATGTGATGGCGCCATA............................................................................................................................................................................	25	8	0.50	4	0	0	1	0	0	0	0	0	0	0	1	0	2	0	0	0	0
...............................................TCAAGGCATCATGGATCAGCACATT....................................................................................................................................................................................................................	25	13	0.46	6	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0
........................................................................................................................................................................................................AGCAGAAATCGATCCGA---GTAATGA-AA-.....................................................	26	13	0.46	6	0	0	0	0	0	0	1	0	4	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAATA..........................................................	27	14	0.43	6	0	0	0	0	0	0	1	0	5	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................G-TTTGAGCAGAAATCGATCCGA---GTAA............................................................	26	14	0.43	6	0	0	0	0	0	0	1	1	3	1	0	0	0	0	0	0	0
.............................................................................................................................................................................GAGGAAGAAGGCTCGAAAGTGG-TTT.....................................................................................	25	7	0.43	3	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................GCAGAAATCGATCCGA---GTAATGA-A.......................................................	24	14	0.43	6	0	0	0	0	0	0	0	4	0	2	0	0	0	0	0	0	0
..............................................................................................................................................................................AGGAAGAAGGCTCGAAAGTGG-A.......................................................................................	22	7	0.43	3	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0
..............................................................................................................TATGCCGAGGATGAAAT.............................................................................................................................................................	17	14	0.43	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
.......................................................................................................................................................................................................GAGCAGAAATCGATCCGA---GTAATG..........................................................	24	14	0.43	6	0	0	0	0	0	0	4	0	1	1	0	0	0	0	0	0	0
........................................................................................................................................TTTGGACATTTCAACAGGATAACGACA.........................................................................................................................	27	10	0.40	4	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0
.....................................................................ATTTACACAGATATC-----CCGGAAAATGT........................................................................................................................................................................................	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
...................................................................................................................................................................CAAAACACACGAGGAAGAAGGCTCGA...............................................................................................	26	5	0.40	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................AACACACGAGGAAGAAGGCTCGAA..............................................................................................	24	5	0.40	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAA.............................................................................................................................................................................................	19	5	0.40	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
......................................................................TTTACACAGATATC-----CCGGAAATA..........................................................................................................................................................................................	23	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAA............................................................................................................................................................................................	20	5	0.40	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................GCAGAAATCGATCCGA---GTAATGA-AA-TG...................................................	27	13	0.38	5	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0
......................................................................................................TGGCGCCATATGCCGAGGATGA................................................................................................................................................................	22	8	0.38	3	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0
......................................................................................................TGGCGCCATATGCCGAGGATGAA...............................................................................................................................................................	23	8	0.38	3	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0
............................................................................CAGATATC-----CCGGAAAATGTGATGG...................................................................................................................................................................................	24	8	0.38	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGCAC.......................................................................................................................................................................................................................	23	14	0.36	5	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0
...............................................TCAAGGCATCATGGATCAGCAC.......................................................................................................................................................................................................................	22	14	0.36	5	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAATGA-A.......................................................	29	14	0.36	5	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATGTG.......................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................GAAGAAGGCTCGAAAGTGG-TTTGAGC.................................................................................	26	6	0.33	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................TTTACACAGATATC-----CCGGAAAATGTGAT.....................................................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................................................................................................AATCGATCCGA---GTAATGA-AA-TGGCC................................................	25	12	0.33	4	0	0	0	0	0	0	0	0	2	0	1	0	1	0	0	0	0
.........................................................................................................................................................................ACACGAGGAAGAAGGCTCGAAAGTGG-........................................................................................	26	6	0.33	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................GAGGAAGAAGGCTCGAAAGTGG-TTTGAG..................................................................................	28	6	0.33	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
..................................................................................TC-----CCGGAAAATGTGATGGCGCCA..............................................................................................................................................................................	23	9	0.33	3	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0
......................................................................TTTACACAGATATC-----CCGGAAAATGTGA......................................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................TTTTTTTGGACATTTCAACAGGA.................................................................................................................................	23	6	0.33	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTTTTTGGACATTTCAACAGGA.................................................................................................................................	22	6	0.33	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.......................................................................TTACACAGATATC-----CCGGAAAATGTGAAA....................................................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
......TAT-----------------------------------GATTCAAGGCATCATGGATCAGC.........................................................................................................................................................................................................................	26	13	0.31	4	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0
......TAT-----------------------------------GATTCAAGGCATCATGGATCA...........................................................................................................................................................................................................................	24	13	0.31	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
......TAT-----------------------------------GATTCAAGGCATCATGGATCAGCACA......................................................................................................................................................................................................................	29	13	0.31	4	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TCCGA---GTAATGA-AA-TGGCCTGCTCAGT........................................	27	10	0.30	3	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0
......................................................ATCATGGATCAGCACATTTACACAGA............................................................................................................................................................................................................	26	10	0.30	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TTTGGACATTTCAACAGGATAAC.............................................................................................................................	23	10	0.30	3	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................TTTGGACATTTCAACAGGATAACG............................................................................................................................	24	10	0.30	3	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0
........................................................CATGGATCAGCACATTTACACAGA............................................................................................................................................................................................................	24	10	0.30	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AAGTGG-TTTGAGCAGAAATCGATCCGA---G...............................................................	28	17	0.29	5	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0
....................................................................................................GATGGCGCCATATGCCGAGGATGAAA..............................................................................................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................................................................................................................TGAGCAGAAATCGATCCGA---GTAATGA-A.......................................................	27	14	0.29	4	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0
........................................................................TACACAGATATC-----CCGGAAAATGT........................................................................................................................................................................................	23	7	0.29	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
......................................................................................................TGGCGCCATATGCCGAGGATGAAATGC...........................................................................................................................................................	27	7	0.29	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................TGATGGCGCCATATGCCGAGGATGAAA..............................................................................................................................................................	27	7	0.29	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................................ACGAGGAAGAAGGCTCGAAAGTGG-T.......................................................................................	25	7	0.29	2	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0
..........................................................................................................................................................................CACGAGGAAGAAGGCTCGAAAGTG..........................................................................................	24	7	0.29	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
............................................................................CAGATATC-----CCGGAAAATGTGATGGCGC................................................................................................................................................................................	27	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..............................................TTCAAGGCATCATGGATCAG..........................................................................................................................................................................................................................	20	14	0.29	4	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGCACT......................................................................................................................................................................................................................	24	14	0.29	4	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0
............................................................................CAGATATC-----CCGGAAAATGTGATGGCG.................................................................................................................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTAAT...........................................................	25	14	0.29	4	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................CGAGGAAGAAGGCTCGAAAGTGG-TTA.....................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...................................................................................................TGATGGCGCCATATGCCGAGGATGAA...............................................................................................................................................................	26	7	0.29	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.........................................................................................................................................TTGGACATTTCAACAGGATAACGA...........................................................................................................................	24	11	0.27	3	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0
................................................................................................................................................................................................TGG-TTTGAGCAGAAATCGATCCGA---GTA.............................................................	27	15	0.27	4	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0
........................................................................................................................................TTTGGACATTTCAACAGGAT................................................................................................................................	20	12	0.25	3	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0
................................................................................................ATGTGATGGCGCCATATGCCGAGGA...................................................................................................................................................................	25	8	0.25	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
...............................................................................................AATGTGATGGCGCCATATGCCGAGGA...................................................................................................................................................................	26	8	0.25	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
................................................................................TATC-----CCGGAAAATGTGATGGCGCCAT.............................................................................................................................................................................	26	8	0.25	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTT.............................................................	24	16	0.25	4	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................CACACGAGGAAGAAGGCTCGAAAGT...........................................................................................	25	4	0.25	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..............................................................TCAGCACATTTACACAGATATC-----CCGG...............................................................................................................................................................................................	26	4	0.25	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
......TAT-----------------------------------GATTCAAGGCATCATGGATCAGCA........................................................................................................................................................................................................................	27	13	0.23	3	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0
......TAT-----------------------------------GATTCAAGGCATCATGGA..............................................................................................................................................................................................................................	21	13	0.23	3	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................GAAGGCTCGAAAGTGG-........................................................................................	16	9	0.22	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
.....................................................CATCATGGATCAGCACATTTACACAGA............................................................................................................................................................................................................	27	9	0.22	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
...............................................TCAAGGCATCATGGATCAGC.........................................................................................................................................................................................................................	20	14	0.21	3	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................TTGAGCAGAAATCGATCCGA---GTAATGA-A.......................................................	28	14	0.21	3	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AGCAGAAATCGATCCGA---GTAATGA-........................................................	24	14	0.21	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TTTGAGCAGAAATCGATCCGA---GTAAAA..........................................................	27	14	0.21	3	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0
..............................................TTCAAGGCATCATGGATCAGCATT......................................................................................................................................................................................................................	24	14	0.21	3	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0
..........................................................................CACAGATATC-----CCGGAAAATGTGA......................................................................................................................................................................................	23	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.....................................................................ATTTACACAGATATC-----CCGGAAAA...........................................................................................................................................................................................	23	5	0.20	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................AAACACACGAGGAAGAAGGCTCGA...............................................................................................	24	5	0.20	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................CACACGAGGAAGAAGGCTCG................................................................................................	20	5	0.20	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................CACACGAGGAAGAAGGCTC.................................................................................................	19	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................CATTTACACAGATATC-----CCG................................................................................................................................................................................................	19	5	0.20	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................AAACACACGAGGAAGAAGGCTCGAA..............................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................AAAACACACGAGGAAGAAGGCTCGAAAA............................................................................................	28	5	0.20	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
......................................................................TTTACACAGATATC-----CCGGAAAATG.........................................................................................................................................................................................	24	5	0.20	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.....................................................................ATTTACACAGATATC-----CCGGAA.............................................................................................................................................................................................	21	5	0.20	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................ACACAGATATC-----CCGGAAAATGTGAT.....................................................................................................................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................................................................CACAGATATC-----CCGGAAAATGTG.......................................................................................................................................................................................	22	5	0.20	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0

dm3

GATCCATTG-----------------------------------GATTCAAGGCATCATGGATCAGCACATTTACACAGATATC-----CTGAAAAATGTGATGCTGCCATATGACGAGGATGAAATGCCG-TTGGTTTGGACATTTCAACAGGATAACGATCCAAAACACACGAGCAAGAAAGCTCGAAAGTGG-TTTGAGCAGAAATCGATCCGA---GTAATGA-AA-TGGCCTGCTCAGTCACCCGAATTGAATCC--------------AATCGAAAA-	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................................................................................................TGCCATATGACGAGGATGAAATGCCG-T.......................................................................................................................................................	27	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0
............................................................................................................................AATGCCG-TTGGTTTGGACATT..........................................................................................................................................	21	16	4.00	64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	16	4	17	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................GCCATATGACGAGGATGAAATGCCG-TT......................................................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................GCCATATGACGAGGATGAAATGCCG-T.......................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0
.................................................................................................................................................................TCCAAAACACACGAGCAAGAAAGCTC.................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................................TCCAAAACACACGAGCAAGAAAGC...................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................GATGAAATGCCG-TTGGTTTGGACATT..........................................................................................................................................	26	16	1.56	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................GCTGCCATATGACGAGGAT..................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................................................................................CAAAACACACGAGCAAGAAAGCTC.................................................................................................	24	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................GATGAAATGCCG-TTGGTTTGGA..............................................................................................................................................	22	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................TGGACATTTCAACAGGATAAC.............................................................................................................................	21	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................TGGATCAGCACATTTACACAGATA..........................................................................................................................................................................................................	24	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................ATGGATCAGCACATTTACACAGATA..........................................................................................................................................................................................................	25	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GACATTTCAACAGGATAAC.............................................................................................................................	19	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................GATGAAATGCCG-TTGGTTTG................................................................................................................................................	20	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TTGGACATTTCAACAGGATAA..............................................................................................................................	21	19	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GATCCATTG-----------------------------------GATTCAAAGCATCATGGATCAGCACATTTACACAGATATC-----CTGGAAAATGTGATGCTGCCATATGCCGAGGATGAAATGCCG-TTGGTTTGGACATTTCAATAAGGTAACGACCCAAAACACACGAGCAAGAAAGCTCGAAAGTAG-TTTGAGCAGAAATCGATCAGA---GTAATGA-AA-TGGTCTGCTCAGTCACCCGACTTGAATCC--------------AATCGAAAA-	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
............................................................................................................................AATGCCG-TTGGTTTGGAC.............................................................................................................................................	18	2	0.50	1	0	0	0	0	1	0	0
........................................................................................................................ATGAAATGCCG-TTGGTTTGGA..............................................................................................................................................	21	2	0.50	1	0	0	0	0	1	0	0
.............................................................................................................................................................................................................................TAATGA-AA-TGGTCTGCTCA..........................................	19	16	0.06	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................CAGA---GTAATGA-AA-TGGTCTGC.............................................	21	17	0.06	1	0	1	0	0	0	0	0
......................................................................................................................................................................................................................AGA---GTAATGA-AA-TGGTCT...............................................	18	17	0.06	1	0	0	0	0	0	1	0
..........................................................................................................................................TGGACATTTCAATAAGGTAACGACCCA.......................................................................................................................	27	19	0.05	1	1	0	0	0	0	0	0
..............................................TTCAAAGCATCATGGATCAGC.........................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0	0
..........................................................................................TGGAAAATGTGATGCTGCCATATGCCG.......................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0
.................................................................................ATC-----CTGGAAAATGTGATGCTGCCA..............................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1	0
.............................................ATTCAAAGCATCATGGATCAGC.........................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0
.......................................................................................................GCTGCCATATGCCGAG.....................................................................................................................................................................	16	20	0.05	1	0	0	0	0	0	0	1
....CATTG-----------------------------------GATTCAAAGCATC...................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	1	0

droYak3

GTTCCATGGAGTA--TGGAGTAGGTCCGTTC-------------CATTCAAGGCATCATGGATCAGCACATTTACACAGATATC-----CTGGAAAATGTGATGCTCCCATAAGCCGAGAATGAAATGCCG-TATGTTTGGACATTTCAACAAGATAACGTTCCAAAACACACGAGCAAGAAAGCTCGAAAGTGG-TTTGAGTAGAAATCGATCCGA---ATAATGA-AA-TGGCCTGCTAAGTCACCCGACTTGAATCC--------------AATCGAA-A-	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.........................................................................................................TCCCATAAGCCGAGAATGAAATGCCG-........................................................................................................................................................	26	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................ATCGATCCGA---ATAATGA-AA-TGGCC................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
......................................................................TTTACACAGATATC-----CTGGAAAATGTGA......................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................GATCCGA---ATAATGA-AA-TGGCCTGC.............................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
........................................................................TACACAGATATC-----CTGGAAAATGTGAT.....................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................TCCGTTC-------------CATTCAAGGCATCATGGATC............................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TCGATCCGA---ATAATGA-AA-TGGCCTGC.............................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................CGTTCCAAAACACACGAGCAAGA.......................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................ACAGATATC-----CTGGAAAATGTGAT.....................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ATAACGTTCCAAAACACACGAGCAAGA.......................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..TCCATGGAGTA--TGGAGTAGGTCCGTT..............................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................TCATGGATCAGCACATTTACACAGA............................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................TGATGCTCCCATAAGCCGAGAATGAAAT.............................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................TAACGTTCCAAAACACACGAGCAAGAA......................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................ATCGATCCGA---ATAATGA-AA-TGGC.................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................CATCATGGATCAGCACATTTACACAG.............................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................CGTTC-------------CATTCAAGGCATCATGGA..............................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................ACAGATATC-----CTGGAAAATGTGATGC...................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................CAAGGCATCATGGATCAGCACATTTACA................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AAGATAACGTTCCAAAACACACGA.............................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

GATTCATCG-----------------------------------CATTGATGGAATAATGGACAGATTCGTATACAGAGACTTA-----TTGGAGACAGTGATGCTGCCATATGCTGAGGATAATATGCCA-ATTTTATGGAAGTTCCAGCAGGATAACGACCCAAAACACGCCTCTCTACTAGTCAGGGAGTGG-TTTCGTGAGCAAAATGTGGAT---GTTCTGG-AA-TGGCCGAGTCAATCCCCTGACCTTAATCC--------------CATCGAAAA-	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ACTTTATTG-----------------------------------GATACAAGGCAATATGTGTGCTACAGACTATGTAAACATA-----ATGAAGAAGGTTATGTTA-CATATGCCGAAGATGAAATGCCT-TTAACGTTGGAATTTATGCAGGATAATGATCCCAAACACACATCGAAGCTGGCGAAAAATTGG-TTCCAGGACAAT------AAA---GTTATGG-AT-TGGCCAGCTCAGTCACCCGACTTAAACCC--------------CATTGAGCA-	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TATTCACTG-----------------------------------GATTAGACCCATCAGGGATCAACATGTCTACGTCGATATT-----TTAGAAACTGTTATGCTACCATATGCGGAGTTCGAAATGCCT-TTGTTTTGGGTGTTTCAGCAAGACAACGACCCAAAGCATACGAGCAGGAAAGCTCGATCGTGG-TTTGAGACCAACAATGTAAAC---GTCTTGG-AG-TGGCCCGCACAGTCGCCAGACTTAAATCC--------------GATTGAAAA-	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AATACATTG-----------------------------------GATAAAAGGTATTATTGATCAACATGTCTATTGCGATATT-----TTGCAATCAGTGATGCTGCCTTGTGCAGAATACGAAATGCCG-TTGTTGTGTGTCTCCCAACATGATAACAACCCTAAACATACCAGCAAGAAAGCTCGCAAGTGG-TTTCAAGACAGATCCCTTCAC---CTAATGG-AATGGATCCCTTCAGTCTCCAGACTTAAGCCC--------------GATAGAGAA-	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CATACATAT-----------------------------------GATCGATGGGATCATGGAGCAATATACATATGCACAAATA-----CTTAAAACTGTCATGCAGTCGTATGCTGAGAAAGAGATGCCT-TTAATTTGGACATTTCAGCTGGACAATGATCCTAAACATACCAGCAAGGTGGCCAGGGAGGGG-TTTATTAAAGAAAAAGTTGAT---GAAATGC-TA-TGGCCAGCACAGTCCCCGGATTTAAATCC--------------GATTGAAAA-	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GATACATTG-----------------------------------GATCAAGACCATCATGGATCAGCACGTTTATGTGGATATC-----ATGGAGACTATTATGTTACCTTTCGCAGAATACGAAATGCCA-CTCGTGTGGGTCTTTCAACAAGATAATGACCCAAAACATACCAGCAAGAAGGCAAAGAAGTGG-TTTGGGGACAACTCTGTAAAC---GTTATGG-AG-TGGCCTCCGCAGTCTCCAGACCTTAATCC--------------TATAGAGAA-	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AATACATTG-----------------------------------GATAAAAGGTATTATGGATCAGCACGTCTATTGCGATATT-----TTGCTAACAGTGATGCTGTCTTATGCAGAATACGAAATACCG-TTGTTGTGGGTCTTCCAACAGGATAACGACCCTAAACATACCAGCAAGAAAGCTCCTAAGTGG-TTTCAAGACAGATCCCTTCAC---CTAATGG-AT-TGGCCTGCTCAGTCTCCAGACTTAAACCC--------------GATAGAGAA-	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TATACACTG-----------------------------------GATAAAATCTATAATGGATCAACACGTCTATATGGATATT-----TTGCAATCTGTAATGTTACCCTTCGCAGAAGATGATATGCCT-CTTATTTGGGTCTTCCAGCAGGATAATGACCCAAAACACACAAGCAAAAAGGCAAAGGAGTGG-TTCCTCAACAATGCTGTACAA---GTTTTGG-AG-TGGCCTGCGCAGTCGCCGGATCTAAATCC--------------AATTGAAAA-	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGCCTGC.............................................	24	17	1.18	20	13	7	0	0	0	0
..........................................................TGGATCAACACGTCTATATGGA............................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
.......................................................................CTATATGGATATT-----TTGCAATC...........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
.............................................................ATCAACACGTCTATATGGATG..........................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGCCTG..............................................	23	17	0.41	7	6	1	0	0	0	0
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGCCTGCGC...........................................	26	17	0.41	7	6	1	0	0	0	0
............................................................................................CAATCTGTAATGTTACCCTTCGCA........................................................................................................................................................................	24	17	0.35	6	5	1	0	0	0	0
...........................................................................................GCAATCTGTAATGTTACCCTTCGC.........................................................................................................................................................................	24	17	0.35	6	4	2	0	0	0	0
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGCCTGCG............................................	25	17	0.35	6	6	0	0	0	0	0
.............................................................................................................................................................................................................AATGCTGTACAA---GTTTTGG-AG-TGGC.................................................	25	17	0.24	4	0	1	0	0	3	0
...................................................................................................................................................................................................................GTACAA---GTTTTGG-AG-TGGCCTGC.............................................	23	17	0.24	4	4	0	0	0	0	0
...............................................................................................................................................CTTCCAGCAGGATAATGACCCAAAAC...................................................................................................................	26	16	0.19	3	2	1	0	0	0	0
........................................................................................................................................................................CACACAAGCAAAAAGGCAAAGGA.............................................................................................	23	16	0.19	3	2	1	0	0	0	0
.......................................................................................................................................................................................................................AA---GTTTTGG-AG-TGGCCTGCGCAG.........................................	23	17	0.18	3	3	0	0	0	0	0
....................................................................................................................GAAGATGATATGCCT-CTTATTTGGG..............................................................................................................................................	25	17	0.18	3	1	1	0	0	1	0
...........................................................................................GCAATCTGTAATGTTACCCTTCG..........................................................................................................................................................................	23	17	0.18	3	3	0	0	0	0	0
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGCCTGCGCA..........................................	27	17	0.18	3	2	1	0	0	0	0
..........................................................................................TGCAATCTGTAATGTTACCCTTCG..........................................................................................................................................................................	24	17	0.18	3	3	0	0	0	0	0
..............................................................................................................................................TCTTCCAGCAGGATAATGACCCAAAACA..................................................................................................................	28	16	0.13	2	2	0	0	0	0	0
.................................................................................................................................................TCCAGCAGGATAATGACCCAAAAC...................................................................................................................	24	16	0.13	2	2	0	0	0	0	0
................................................................................................................................................TTCCAGCAGGATAATGACCCA.......................................................................................................................	21	16	0.13	2	2	0	0	0	0	0
.................................................................................................................................................TCCAGCAGGATAATGACCCAAAACA..................................................................................................................	25	16	0.13	2	2	0	0	0	0	0
........................................................................................................................................................................CACACAAGCAAAAAGGCAAAGGAG............................................................................................	24	16	0.13	2	1	0	0	0	1	0
......................................................................................................................................................................................................................CAA---GTTTTGG-AG-TGGCCTGCG............................................	21	17	0.12	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................ACAA---GTTTTGG-AG-TGGCCTGCG............................................	22	17	0.12	2	2	0	0	0	0	0
...............................................................................................................................................................................................GTGG-TTCCTCAACAATGCTG........................................................................	20	17	0.12	2	2	0	0	0	0	0
.............................................................................................................................ATGCCT-CTTATTTGGGTCTTCCAG......................................................................................................................................	24	17	0.12	2	2	0	0	0	0	0
.........................................................................................................TACCCTTCGCAGAAGATGATATGCC..........................................................................................................................................................	25	17	0.12	2	0	2	0	0	0	0
............................................................................................................................................................................CAAGCAAAAAGGCAAAGGAGT...........................................................................................	21	17	0.12	2	2	0	0	0	0	0
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGCCTGCGCAG.........................................	28	17	0.12	2	2	0	0	0	0	0
.............................................................................................AATCTGTAATGTTACCCTTCGCA........................................................................................................................................................................	23	17	0.12	2	2	0	0	0	0	0
................................................................................................................CGCAGAAGATGATATGCCT-CT......................................................................................................................................................	21	17	0.12	2	0	0	0	0	2	0
.....................................................................................................................................................................................................................ACAA---GTTTTGG-AG-TGGCCTGC.............................................	21	17	0.12	2	2	0	0	0	0	0
................................................................................................................................................................................................................................TGG-AG-TGGCCTGCGCAGTCGCCGG..................................	24	17	0.12	2	2	0	0	0	0	0
............................................................................................CAATCTGTAATGTTACCCTTCGC.........................................................................................................................................................................	23	17	0.12	2	1	1	0	0	0	0
....................................................................................................................GAAGATGATATGCCT-CTTATTTGGGTCT...........................................................................................................................................	28	17	0.12	2	1	1	0	0	0	0
.......................................................................................................................................................................................................................AA---GTTTTGG-AG-TGGCCTGCGC...........................................	21	17	0.12	2	0	2	0	0	0	0
...................................................................................................................................................................................................................GTACAA---GTTTTGG-AG-TGGCCTG..............................................	22	17	0.12	2	1	0	0	0	1	0
...........................................................................................GCAATCTGTAATGTTACCCTTCGCA........................................................................................................................................................................	25	17	0.12	2	2	0	0	0	0	0
....................................................................................................................GAAGATGATATGCCT-CTTATTTGGGTC............................................................................................................................................	27	17	0.12	2	0	2	0	0	0	0
.....................................................................................................................................TTATTTGGGTCTTCCAGCAGG..................................................................................................................................	21	17	0.12	2	2	0	0	0	0	0
..............................................................................................................................................................TGACCCAAAACACACAAGCAAAAAGG....................................................................................................	26	14	0.07	1	0	1	0	0	0	0
.................................................................................................................................................TCCAGCAGGATAATGACCCAAAACACA................................................................................................................	27	15	0.07	1	1	0	0	0	0	0
.................................................................................................................................................TCCAGCAGGATAATGACCCAAAACAC.................................................................................................................	26	15	0.07	1	1	0	0	0	0	0
...................................................................................................................................................CAGCAGGATAATGACCCAAAACACAC...............................................................................................................	26	15	0.07	1	1	0	0	0	0	0
...................................................................................................................................................CAGCAGGATAATGACCCAAAACA..................................................................................................................	23	16	0.06	1	0	0	0	0	0	1
..............................................TAAAATCTATAATGGATCAACACGTCT...................................................................................................................................................................................................................	27	16	0.06	1	0	1	0	0	0	0
........................................................................................................................................................................CACACAAGCAAAAAGGCAAAGG..............................................................................................	22	16	0.06	1	1	0	0	0	0	0
................................................AAATCTATAATGGATCAACACGTCT...................................................................................................................................................................................................................	25	16	0.06	1	0	0	1	0	0	0
...............................................................................................................................................CTTCCAGCAGGATAATGACCCAAAACA..................................................................................................................	27	16	0.06	1	1	0	0	0	0	0
..............................................TAAAATCTATAATGGATCAACACGTCTA..................................................................................................................................................................................................................	28	16	0.06	1	1	0	0	0	0	0
.......................................................................................................................................................................ACACACAAGCAAAAAGGCAAAG...............................................................................................	22	16	0.06	1	1	0	0	0	0	0
.................................................................................................................................................TCCAGCAGGATAATGACCCA.......................................................................................................................	20	16	0.06	1	1	0	0	0	0	0
...............................................................................................................................................CTTCCAGCAGGATAATGACCCA.......................................................................................................................	22	16	0.06	1	0	1	0	0	0	0
..........................................................................................................................................................................CACAAGCAAAAAGGCAAAGGAGTGG-TTC.....................................................................................	28	16	0.06	1	1	0	0	0	0	0
.........................................................................................................................................................................ACACAAGCAAAAAGGCAAAGGAGTGG-........................................................................................	26	16	0.06	1	1	0	0	0	0	0
........................................................................................................................................................................CACACAAGCAAAAAGGCAAAGGG.............................................................................................	23	16	0.06	1	0	1	0	0	0	0
..........................................................................................................................................................................CACAAGCAAAAAGGCAAAGGAGTGG-........................................................................................	25	16	0.06	1	0	1	0	0	0	0
..................................................................................................................................................CCAGCAGGATAATGACCCAAAAC...................................................................................................................	23	16	0.06	1	1	0	0	0	0	0
.................................................................................................................................................................................AAAAAGGCAAAGGAGTGG-TTCC....................................................................................	22	16	0.06	1	0	0	0	0	1	0
................................................................................................................................................................ACCCAAAACACACAAGCAAAAAGGC...................................................................................................	25	16	0.06	1	0	1	0	0	0	0
....................................................................................................................................................................................................................TACAA---GTTTTGG-AG-TGGCCTGCGCAG.........................................	26	17	0.06	1	1	0	0	0	0	0
..........................................................................................................................................................................................AAGGAGTGG-TTCCTCAACAATGCT.........................................................................	24	17	0.06	1	1	0	0	0	0	0
................................................................................................................................................................................................TGG-TTCCTCAACAATGCTGTACAA---GT..............................................................	26	17	0.06	1	1	0	0	0	0	0
..............................................................................................................TTCGCAGAAGATGATATGCCT-........................................................................................................................................................	21	17	0.06	1	0	0	0	0	0	1
..................................................................................TT-----TTGCAATCTGTAATGTTACCCT.............................................................................................................................................................................	24	17	0.06	1	1	0	0	0	0	0
............................................................................................................................TATGCCT-CTTATTTGGGTCTTCCA.......................................................................................................................................	24	17	0.06	1	1	0	0	0	0	0
.............................................................................................................................................................................................................AATGCTGTACAA---GTTTTGG-AG-TG...................................................	23	17	0.06	1	1	0	0	0	0	0
..........................................................................................................................................................................................................AACAATGCTGTACAA---GTTTTGG-AG-TGGCC................................................	29	17	0.06	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................TTTGG-AG-TGGCCTGCGCAGTC.......................................	21	17	0.06	1	1	0	0	0	0	0
.........................................................................................TTGCAATCTGTAATGTTACCCTTCGCA........................................................................................................................................................................	27	17	0.06	1	1	0	0	0	0	0
...................................................................................................................................................................................................................GTACAA---GTTTTGG-AG-TGGC.................................................	19	17	0.06	1	0	0	0	0	1	0
.......................................................................................................................................................................................................................AA---GTTTTGG-AG-TGGCCTG..............................................	18	17	0.06	1	1	0	0	0	0	0
..................................................................................................GTAATGTTACCCTTCGCAGAAGATGATA..............................................................................................................................................................	28	17	0.06	1	1	0	0	0	0	0
..................................................................................TT-----TTGCAATCTGTAATGTTACCCTT............................................................................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
TATACACTG-----------------------------------GATAAAATCTATAATGGA..............................................................................................................................................................................................................................	27	17	0.06	1	0	1	0	0	0	0
........................................................................................................................................................................................................................A---GTTTTGG-AG-TGGCCTGCGCA..........................................	21	17	0.06	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................TTGG-AG-TGGCCTGCGCAGTCG......................................	21	17	0.06	1	1	0	0	0	0	0
.....................................................................................................................AAGATGATATGCCT-CTTATTTGGG..............................................................................................................................................	24	17	0.06	1	1	0	0	0	0	0
............................................................................................CAATCTGTAATGTTACCCTTCGCAG.......................................................................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
.................................................................................................................GCAGAAGATGATATGCCT-CTT.....................................................................................................................................................	21	17	0.06	1	1	0	0	0	0	0
.............................................................................................................................................................................................GAGTGG-TTCCTCAACAATGCTGTA......................................................................	24	17	0.06	1	1	0	0	0	0	0
................................................................................TATT-----TTGCAATCTGTAATGTTACCC..............................................................................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................TTGG-AG-TGGCCTGCGCAGTCGCCGG..................................	25	17	0.06	1	1	0	0	0	0	0
......................................................................................................TGTTACCCTTCGCAGAAGATGATATGC...........................................................................................................................................................	27	17	0.06	1	0	0	1	0	0	0
....................................................................................................................GAAGATGATATGCCT-CTTATTTGG...............................................................................................................................................	24	17	0.06	1	1	0	0	0	0	0
..............................................................................................................................TGCCT-CTTATTTGGGTCTTCCAGCAG...................................................................................................................................	26	17	0.06	1	1	0	0	0	0	0
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGCCT...............................................	22	17	0.06	1	0	0	0	0	1	0
................................................................................................................................CCT-CTTATTTGGGTCTTCCAGCAGG..................................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................AA---GTTTTGG-AG-TGGCCTGCG............................................	20	17	0.06	1	1	0	0	0	0	0
..............................................................................................................................................TCTTCCAGCAGGATAATGACCC........................................................................................................................	22	17	0.06	1	0	1	0	0	0	0
..............................................................................................................................................................................................................ATGCTGTACAA---GTTTTGG-AG-.....................................................	20	17	0.06	1	1	0	0	0	0	0
................................................................................................................................................................................................................................TGG-AG-TGGCCTGCGCAGTCGCCG...................................	23	17	0.06	1	1	0	0	0	0	0
...................................................................................T-----TTGCAATCTGTAATGTTACCCTTC...........................................................................................................................................................................	25	17	0.06	1	0	1	0	0	0	0
.............................................................................................AATCTGTAATGTTACCCTTCGC.........................................................................................................................................................................	22	17	0.06	1	1	0	0	0	0	0
....................................................................................................................................................................................................TTCCTCAACAATGCTGTACAA---GTTTTG..........................................................	27	17	0.06	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................TTTTGG-AG-TGGCCTGCGCAGTCG......................................	23	17	0.06	1	1	0	0	0	0	0
...............................................................................................................................GCCT-CTTATTTGGGTCTTCCAGCAGG..................................................................................................................................	26	17	0.06	1	1	0	0	0	0	0
....................................................................................................................................CTTATTTGGGTCTTCCAGCAG...................................................................................................................................	21	17	0.06	1	1	0	0	0	0	0
........................................................................................................................................................................................CAAAGGAGTGG-TTCCTCAACAATGCTG........................................................................	27	17	0.06	1	1	0	0	0	0	0
.....................................................................................................................AAGATGATATGCCT-CTTATTTGGGTC............................................................................................................................................	26	17	0.06	1	1	0	0	0	0	0
...............................................................................................................................................................................................................TGCTGTACAA---GTTTTGG-AG-TGGCCTG..............................................	26	17	0.06	1	1	0	0	0	0	0
....................................................................................................................................................................................................................TACAA---GTTTTGG-AG-TGGCCTG..............................................	21	17	0.06	1	1	0	0	0	0	0
............................................................................................................................................................................................................CAATGCTGTACAA---GTTTTGG-AG-TGGC.................................................	26	17	0.06	1	0	0	0	0	1	0
.........................................................................................................................................................................................AAAGGAGTGG-TTCCTCAACAATGC..........................................................................	24	17	0.06	1	0	1	0	0	0	0
...............................................................................................................................................................................GCAAAAAGGCAAAGGAGTGG-T.......................................................................................	21	17	0.06	1	0	0	0	0	1	0
................................................................................................................................................................................................................................TGG-AG-TGGCCTGCGCAGTCGCC....................................	22	17	0.06	1	1	0	0	0	0	0
..................................................................................................................................................................................AAAAGGCAAAGGAGTGG-TTCC....................................................................................	21	17	0.06	1	1	0	0	0	0	0
.........................................................................................................TACCCTTCGCAGAAGATGATATGC...........................................................................................................................................................	24	17	0.06	1	0	0	0	0	0	1
............................................................................................................................TATGCCT-CTTATTTGGGTCTTCCAGCA....................................................................................................................................	27	17	0.06	1	1	0	0	0	0	0
........................................................................................................................ATGATATGCCT-CTTATTTGG...............................................................................................................................................	20	17	0.06	1	1	0	0	0	0	0
..................................................................................................................................................................................AAAAGGCAAAGGAGTGG-TTCCTCAAC...............................................................................	26	17	0.06	1	0	0	0	0	1	0
............................................................................................................................................................................CAAGCAAAAAGGCAAAGGAGTGG-........................................................................................	23	17	0.06	1	1	0	0	0	0	0
................................................................................................................................CCT-CTTATTTGGGTCTTCCAG......................................................................................................................................	21	17	0.06	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................AA---GTTTTGG-AG-TGGCCTGCGCAGT........................................	24	17	0.06	1	0	0	0	0	1	0
.......................................................................................................GTTACCCTTCGCAGAAGATGATATG............................................................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
............................................................................................................................................................................................................................GTTTTGG-AG-TGGCCTGCGCAGTC.......................................	23	17	0.06	1	0	1	0	0	0	0
..................................................................................................................................................................................................................TGTACAA---GTTTTGG-AG-TGGC.................................................	20	17	0.06	1	1	0	0	0	0	0
.................................................................................................................................................TCCAGCAGGATAATGACCC........................................................................................................................	19	17	0.06	1	0	1	0	0	0	0
...............................................................................................................................................................................................................TGCTGTACAA---GTTTTGG-AG-TGGC.................................................	23	17	0.06	1	0	0	0	0	0	1
.................................................................................................................................................................................................................CTGTACAA---GTTTTGG-AG-TGGCCTGC.............................................	25	17	0.06	1	1	0	0	0	0	0
............................................................................................CAATCTGTAATGTTACCCT.............................................................................................................................................................................	19	17	0.06	1	0	1	0	0	0	0
................................................................................................................................CCT-CTTATTTGGGTCTTCCAGT.....................................................................................................................................	22	17	0.06	1	1	0	0	0	0	0
........................................................................................................................ATGATATGCCT-CTTATTTGGG..............................................................................................................................................	21	17	0.06	1	0	0	0	0	0	1
...............................................................................................TCTGTAATGTTACCCTTCGC.........................................................................................................................................................................	20	17	0.06	1	1	0	0	0	0	0
.......................................................................................................................GATGATATGCCT-CTTATTTGGGTCT...........................................................................................................................................	25	17	0.06	1	0	0	1	0	0	0
...................................................................................................................................................................................AAAGGCAAAGGAGTGG-TTCCT...................................................................................	21	17	0.06	1	0	0	0	0	0	1
.....................................................................................................................................................................................................TCCTCAACAATGCTGTACAA---GTTTTGG-........................................................	27	17	0.06	1	1	0	0	0	0	0
....................................................................................................................................................................................AAGGCAAAGGAGTGG-TTCCTC..................................................................................	21	17	0.06	1	1	0	0	0	0	0
.........................................................................................................................TGATATGCCT-CTTATTTGG...............................................................................................................................................	19	17	0.06	1	1	0	0	0	0	0
............................................................................................................................TATGCCT-CTTATTTGGGTCTTCCAGC.....................................................................................................................................	26	17	0.06	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................TCGCCGGATCTAAATCC--------------AATTGAAAA-	26	17	0.06	1	1	0	0	0	0	0
............................................................................................CAATCTGTAATGTTACCCTTC...........................................................................................................................................................................	21	17	0.06	1	1	0	0	0	0	0
......................................................................................................................................TATTTGGGTCTTCCAGCAGGA.................................................................................................................................	21	17	0.06	1	0	0	0	0	1	0
................................................................................................................................................................................................................................TGG-AG-TGGCCTGCGCAGTCGC.....................................	21	17	0.06	1	1	0	0	0	0	0
..............................................................................................................................TGCCT-CTTATTTGGGTCTTCC........................................................................................................................................	21	17	0.06	1	1	0	0	0	0	0
................................................................................................................CGCAGAAGATGATATGCCT-CTTATTTGG...............................................................................................................................................	28	17	0.06	1	1	0	0	0	0	0
...............................................................................ATATT-----TTGCAATCTGTAATGTTACCC..............................................................................................................................................................................	26	17	0.06	1	1	0	0	0	0	0
...................................................................................................................................................................................................................GTACAA---GTTTTGG-AG-TGGCCT...............................................	21	17	0.06	1	0	1	0	0	0	0
....................................................................................................................................................................................................TTCCTCAACAATGCTGTACAA---GTT.............................................................	24	17	0.06	1	0	1	0	0	0	0
.........................................................................................TTGCAATCTGTAATGTTACCCTTCGC.........................................................................................................................................................................	26	17	0.06	1	1	0	0	0	0	0
....................................................................................................................................................................................................TTCCTCAACAATGCTGTACAA---GTC.............................................................	24	17	0.06	1	0	1	0	0	0	0
...........................................................................................GCAATCTGTAATGTTACCCTT............................................................................................................................................................................	21	17	0.06	1	1	0	0	0	0	0
...............................................................................................TCTGTAATGTTACCCTTCGCAGAAG....................................................................................................................................................................	25	17	0.06	1	0	1	0	0	0	0
.......................................................................................................................................................................................................CTCAACAATGCTGTACAA---GTT.............................................................	21	17	0.06	1	0	1	0	0	0	0
............................................................................TGGATATT-----TTGCAATCTGTAATGTTACCC..............................................................................................................................................................................	29	17	0.06	1	0	1	0	0	0	0
..................................................................................................................................................................................AAAAGGCAAAGGAGTGG-TTCCTC..................................................................................	23	17	0.06	1	1	0	0	0	0	0
..........................................................................................................ACCCTTCGCAGAAGATGATATGCC..........................................................................................................................................................	24	17	0.06	1	0	1	0	0	0	0
..........................................................................................TGCAATCTGTAATGTTACCCTTC...........................................................................................................................................................................	23	17	0.06	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................TTTTGG-AG-TGGCCTGCGCAGT........................................	21	17	0.06	1	1	0	0	0	0	0
...............................................................................................................................................CTTCCAGCAGGATAATGACCC........................................................................................................................	21	17	0.06	1	0	1	0	0	0	0
.....................................................................................................................................................................................................TCCTCAACAATGCTGTACAA---GT..............................................................	22	17	0.06	1	1	0	0	0	0	0
..............................................................................................................................................................................................................ATGCTGTACAA---GTTTTGG-AG-T....................................................	21	17	0.06	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................G-TGGCCTGCGCAGTCGCCGGA.................................	21	18	0.06	1	1	0	0	0	0	0
.................................................................................................................................................................................AAAAAGGCAAAGGAGTGG-TT......................................................................................	20	18	0.06	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................AG-TGGCCTGCGCAGTCGCCGG..................................	21	18	0.06	1	1	0	0	0	0	0
................................................................................................................................................................................CAAAAAGGCAAAGGAGTGG-TTC.....................................................................................	22	18	0.06	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................G-AG-TGGCCTGCGCAGTCGC.....................................	19	18	0.06	1	0	0	0	0	0	1
...................................................................................................TAATGTTACCCTTCGCAGAAGA...................................................................................................................................................................	22	18	0.06	1	0	1	0	0	0	0
.................................................................................................................................................................................AAAAAGGCAAAGGAGTGG-TTC.....................................................................................	21	18	0.06	1	0	0	0	0	0	1
................................................................................................................................................................................CAAAAAGGCAAAGGAGTGG-TT......................................................................................	21	18	0.06	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................CTGCGCAGTCGCCGGATCTA.............................	20	19	0.05	1	1	0	0	0	0	0
.........................................................................................................................................TTGGGTCTTCCAGCAGGATAA..............................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.................................................................................................TGTAATGTTACCCTTCGCAGA......................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0

droBip1

AATA----------------------------------------------TGGTATAATGGATCGACTCGTATACTCCGAAATC-----TTGAAAAACGTCATGCTGCCTATTGCTGAGGATGAAATGCAA-TTGTTATGGGTCTTCCAACAGGATAATGACCCAAAGCATACCAGCAATAAAGCTCGAAAGTGG-TAAGAAGACAGATCTCTCCAT---GTAATGG-AT-TGGCTAGCTCAGTCCCCAGACCTAAATCC--------------TATGGAAAA-	Size	Hit Count	Total Norm	Total
No Reads

dp5

AATACATGG-----------------------------------CA-CAACCCCATTATGGATCAACATGTCTATGTCAATATC-----AAAGAAACAGTGATTCTGCTTTATGCAGAATACGAAATAGAG-TTGTTTTGTGTCTTCCAGCAGGAAAATGACCCAAAACGAACTAGAAAGAAAGCTCGAAAGTGG-TTCGAGCACAATTCACTTAGT---GCAATAG-AT-TGGCCTGTTCAGTCTCCAGACTTTAACCC--------------CATTGCTAAT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...........................................................................................................................................................................................GAAAGTGG-TTCGAGCACAATT...........................................................................	21	11	0.09	1	0	1	0	0	0	0	0	0	0	0

droPer2

AATACATGG-----------------------------------CA-CAACCCCATTATGGATCATCATGTCTATGTCAATATC-----AAAGAAACAGTGATTCTGCTTTATGCAGAATACGAAATAGAG-TTGTTTTGTAACTTCCATCAGGAAAATCACCCAAAACGAACTAGAAAGAAAGCTCGAAAGTGGGTTCGAGCACAATTCTCTTAGT---GCAATGGGAT-TGGCCTGTTCAGTCTCCAGACTTGAACCC--------------CATTGCTAA-	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

GATTCATTG-----------------------------------GATTAAGACGATCATGGATCAGCACGTCTACGTTGAAATC-----CTGCAAAATATAATGCTACCACATGCAGAGGATGAAATGCCA-TTAGTTTGGGTCTTCCAGCAGGACAATGACCCCAAGCACACGAGCAAGAAAGCGGAAAAGTGG-TTTGCAGACAACACCATCAAC---GTCATGG-AA-TGGCCTCCATAGTCCCCGGGTCTCAATCC--------------AATTGAGAA-	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........................................................................................................................................................................ACGAGCAAGAAAGCGGAAAAGTGG-........................................................................................	24	3	1.33	4	0	4	0	0	0
................................................................................................................TGCAGAGGATGAAATGCCA-TTAGTT..................................................................................................................................................	25	3	1.33	4	0	0	0	4	0
...........................................................................................................................................................................ACGAGCAAGAAAGCGGAAAAGTGG-TT......................................................................................	26	3	1.00	3	0	2	0	0	1
...................................................................................................................AGAGGATGAAATGCCA-TTAGTTTGG...............................................................................................................................................	25	6	1.00	6	0	3	0	2	1
...........................................................................................................................................................................ACGAGCAAGAAAGCGGAAAAGTGG-T.......................................................................................	25	3	1.00	3	0	1	0	2	0
...................................................................................................................................................................................GAAAGCGGAAAAGTGG-TTTGCAGA................................................................................	24	3	1.00	3	0	3	0	0	0
......................................................................................................................................................................................................TGCAGACAACACCATCAAC---GTCATGG-AA-.....................................................	28	6	0.67	4	0	0	0	4	0
................................................................AGCACGTCTACGTTGAAATC-----CTG................................................................................................................................................................................................	23	4	0.50	2	0	2	0	0	0
....CATTG-----------------------------------GATTAAGACGATCATGGATC............................................................................................................................................................................................................................	25	6	0.50	3	0	3	0	0	0
.ATTCATTG-----------------------------------GATTAAGACGATCATG................................................................................................................................................................................................................................	24	7	0.43	3	0	3	0	0	0
.......TG-----------------------------------GATTAAGACGATCATGGATCAGCACG......................................................................................................................................................................................................................	28	5	0.40	2	0	2	0	0	0
....................................................CGATCATGGATCAGCACGTCTACGT...............................................................................................................................................................................................................	25	5	0.40	2	0	2	0	0	0
.................................................................................................................................................TCCAGCAGGACAATGACCCCAAG....................................................................................................................	23	3	0.33	1	0	1	0	0	0
..............................................................................................................................................TCTTCCAGCAGGACAATGACCCC.......................................................................................................................	23	3	0.33	1	0	1	0	0	0
..........................................................................................................ACCACATGCAGAGGATGAAATGCC..........................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................CGAGCAAGAAAGCGGAAAAGTGG-T.......................................................................................	24	3	0.33	1	0	1	0	0	0
.................................................................................................................................................TCCAGCAGGACAATGACCCCAAGCAC.................................................................................................................	26	3	0.33	1	0	1	0	0	0
.........................................................................................................................................................................ACACGAGCAAGAAAGCGGAAAAG............................................................................................	23	3	0.33	1	0	1	0	0	0
...............................................................................................................ATGCAGAGGATGAAATGCCA-TTAGTT..................................................................................................................................................	26	3	0.33	1	0	0	0	1	0
.................................................................................................................................................................................................GG-TTTGCAGACAACACCATCAAC---GTCA............................................................	27	6	0.33	2	0	2	0	0	0
....................................................................................................................................................................................................TTTGCAGACAACACCATCAAC---GTCA............................................................	25	6	0.33	2	0	2	0	0	0
..............................................................................................................................................TCTTCCAGCAGGACAATGACCCCAAG....................................................................................................................	26	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................CGAGCAAGAAAGCGGAAAAGTGG-........................................................................................	23	3	0.33	1	0	1	0	0	0
.............................................................ATCAGCACGTCTACGTTGAAATC-----CTG................................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0
......................................................................TCTACGTTGAAATC-----CTGCAAAATATAATG....................................................................................................................................................................................	29	3	0.33	1	0	1	0	0	0
....................................................................................................................................................................................................TTTGCAGACAACACCATCAAC---GTC.............................................................	24	6	0.33	2	0	2	0	0	0
....CATTG-----------------------------------GATTAAGACGATCATGGAT.............................................................................................................................................................................................................................	24	6	0.33	2	0	2	0	0	0
.................................................................................................................................................TCCAGCAGGACAATGACCCCAA.....................................................................................................................	22	3	0.33	1	0	1	0	0	0
...............................................................................................................................................CTTCCAGCAGGACAATGACCCCA......................................................................................................................	23	3	0.33	1	0	1	0	0	0
.................................................................................................................................................TCCAGCAGGACAATGACCCCAAGCACAC...............................................................................................................	28	3	0.33	1	0	1	0	0	0
.................................................................................................................................................TCCAGCAGGACAATGACCCCAAGCACACG..............................................................................................................	29	3	0.33	1	0	1	0	0	0
................................................................................................................................................TTCCAGCAGGACAATGACCCCAAG....................................................................................................................	24	3	0.33	1	0	1	0	0	0
.........................................................................................................TACCACATGCAGAGGATGAAATGCCA-........................................................................................................................................................	26	3	0.33	1	0	1	0	0	0
..................................................................................................................................................................................AGAAAGCGGAAAAGTGG-TTTGCAG.................................................................................	24	3	0.33	1	0	1	0	0	0
..........................................................................................................ACCACATGCAGAGGATGAAATGCCA-........................................................................................................................................................	25	3	0.33	1	0	0	0	1	0
...................................................................................................................................................................................GAAAGCGGAAAAGTGG-TTTGCAG.................................................................................	23	3	0.33	1	0	1	0	0	0
......................................................................TCTACGTTGAAATC-----CTGCAAAATATAA......................................................................................................................................................................................	27	3	0.33	1	0	1	0	0	0
..................................................................................................................................................CCAGCAGGACAATGACCCCAAGCAC.................................................................................................................	25	3	0.33	1	0	1	0	0	0
....CATTG-----------------------------------GATTAAGACGATCATGG...............................................................................................................................................................................................................................	22	7	0.29	2	0	2	0	0	0
.......................................................................................................................................................................................................GCAGACAACACCATCAAC---GTCATG..........................................................	24	7	0.29	2	0	2	0	0	0
.ATTCATTG-----------------------------------GATTAAGACGATCATGG...............................................................................................................................................................................................................................	25	7	0.29	2	0	2	0	0	0
..........................................................................................................................................................ACAATGACCCCAAGCACACGAC............................................................................................................	22	4	0.25	1	0	0	0	1	0
.......................................................................................................................................................AGGACAATGACCCCAAGCACACGAG............................................................................................................	25	4	0.25	1	0	1	0	0	0
...................................................................................................................................................CAGCAGGACAATGACCCCAAGA...................................................................................................................	22	4	0.25	1	0	1	0	0	0
.......................................................................................................................................................AGGACAATGACCCCAAGCACAC...............................................................................................................	22	4	0.25	1	0	1	0	0	0
.......................................................................................................................................................AGGACAATGACCCCAAGCACACGA.............................................................................................................	24	4	0.25	1	0	1	0	0	0
.......................................................................................................................................................................................................................AC---GTCATGG-AA-TGGCCTCCATAGTC.......................................	25	4	0.25	1	0	1	0	0	0
......................................................................................................................................................CAGGACAATGACCCCAAGCACACGAGC...........................................................................................................	27	4	0.25	1	0	1	0	0	0
.................................................................GCACGTCTACGTTGAAATC-----CT.................................................................................................................................................................................................	21	4	0.25	1	0	1	0	0	0
...................................................................................................................................................CAGCAGGACAATGACCCCAAGCACACGA.............................................................................................................	28	4	0.25	1	0	1	0	0	0
....................................................................................................................................................AGCAGGACAATGACCCCAAGCACACGA.............................................................................................................	27	4	0.25	1	0	0	0	1	0
...................................................................................................................................................................................................................ATCAAC---GTCATGG-AA-TGGCCTCCAT...........................................	25	4	0.25	1	0	1	0	0	0
.................................................................................ATC-----CTGCAAAATATAATGCTACCACA............................................................................................................................................................................	26	4	0.25	1	0	1	0	0	0
........................................................................................................................................................................CACACGAGCAAGAAAGCGG.................................................................................................	19	4	0.25	1	0	1	0	0	0
.......TG-----------------------------------GATTAAGACGATCATGGATCAGCA........................................................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0
.....ATTG-----------------------------------GATTAAGACGATCATGGATCAGC.........................................................................................................................................................................................................................	27	5	0.20	1	0	0	0	1	0
................................................AAGACGATCATGGATCAGCACGT.....................................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0
............................................................................................................................................................................................................................................TCCATAGTCCCCGGGTCTCAATCC--------------A.........	25	5	0.20	1	0	1	0	0	0
................................................AAGACGATCATGGATCAGCACGTC....................................................................................................................................................................................................................	24	5	0.20	1	0	1	0	0	0
...............................................TAAGACGATCATGGATCAGCACGT.....................................................................................................................................................................................................................	24	5	0.20	1	0	0	0	1	0
........................................................................................................................................................................................................................................GGCCTCCATAGTCCCCGGGT................................	20	5	0.20	1	0	1	0	0	0
.........................................................................................................................................................................................................................................GCCTCCATAGTCCCCGGGTCTCAATC.........................	26	5	0.20	1	0	1	0	0	0
.....................................................................................................................................TAGTTTGGGTCTTCCAGCAGGACAA..............................................................................................................................	25	5	0.20	1	0	1	0	0	0
................................................AAGACGATCATGGATCAGCACGTCT...................................................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0
......................................................ATCATGGATCAGCACGTCTAC.................................................................................................................................................................................................................	21	5	0.20	1	0	0	0	1	0
............................................GATTAAGACGATCATGGATCAGCACG......................................................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0
..................................................................................................................CAGAGGATGAAATGCCA-TTAGA...................................................................................................................................................	22	5	0.20	1	0	0	0	0	1
.......TG-----------------------------------GATTAAGACGATCATGGATC............................................................................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0
...................................................................................................................AGAGGATGAAATGCCA-TTAGTTTGGG..............................................................................................................................................	26	6	0.17	1	0	0	0	1	0
......TTG-----------------------------------GATTAAGACGATCATGGATC............................................................................................................................................................................................................................	23	6	0.17	1	0	1	0	0	0
....................................................................................................................GAGGATGAAATGCCA-TTAGTTTGGGT.............................................................................................................................................	26	6	0.17	1	0	1	0	0	0
............................................................................................................................AATGCCA-TTAGTTTGGGTCTTCC........................................................................................................................................	23	6	0.17	1	0	1	0	0	0
..............................................................................................................................................................................................................ACACCATCAAC---GTCATGG-AA-TGGCC................................................	25	6	0.17	1	0	1	0	0	0
............................................................................................................................AATGCCA-TTAGTTTGGGTCTTCCAG......................................................................................................................................	25	6	0.17	1	0	1	0	0	0
.........................................................ATGGATCAGCACGTCTACGTTG.............................................................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0
....................................................................................................................................................................................................TTTGCAGACAACACCATCAAC---G...............................................................	22	6	0.17	1	0	1	0	0	0
....CATTG-----------------------------------GATTAAGACGATCATGGATCA...........................................................................................................................................................................................................................	26	6	0.17	1	1	0	0	0	0
....................................................................................................................GAGGATGAAATGCCA-TTAGTTTGG...............................................................................................................................................	24	6	0.17	1	0	1	0	0	0
..................................................................................................................................................................................................................CATCAAC---GTCATGG-AA-TGGCCTCCA............................................	25	6	0.17	1	0	1	0	0	0
.....ATTG-----------------------------------GATTAAGACGATCATGGAT.............................................................................................................................................................................................................................	23	6	0.17	1	0	1	0	0	0
....................................................................................................................GAGGATGAAATGCCA-TTAGTTTGGG..............................................................................................................................................	25	6	0.17	1	0	1	0	0	0
..............................................................................................................................................................................................................ACACCATCAAC---GTCATGG-AA-TGGC.................................................	24	6	0.17	1	0	1	0	0	0
.................................................................................................................................................................................................GG-TTTGCAGACAACACCATCAAC---G...............................................................	24	6	0.17	1	0	1	0	0	0
....................................................................................................................GAGGATGAAATGCCA-TTAGTTTGGGTC............................................................................................................................................	27	6	0.17	1	0	1	0	0	0
.....................................................................................................................................................................................................................CAAC---GTCATGG-AA-TGGCCTCC.............................................	21	6	0.17	1	0	0	0	1	0
....................................................................................................................................................................................................TTTGCAGACAACACCATCAAC---GTCATG..........................................................	27	6	0.17	1	0	1	0	0	0
.....ATTG-----------------------------------GATTAAGACGATCATGGA..............................................................................................................................................................................................................................	22	7	0.14	1	0	1	0	0	0
....CATTG-----------------------------------GATTAAGACGATCATGGA..............................................................................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0
........................................................................................................................................................................................................CAGACAACACCATCAAC---GTCAT...........................................................	22	7	0.14	1	0	1	0	0	0
..TTCATTG-----------------------------------GATTAAGACGATCA..................................................................................................................................................................................................................................	21	7	0.14	1	0	1	0	0	0
.......................................................................................................................................................................................................GCAGACAACACCATCAAC---G...............................................................	19	7	0.14	1	0	1	0	0	0

droVir3

AATACATTG-----------------------------------GAG-AAAACCATCATGGATCAGCACGTGTATGTGAATATC-----ATGGAGACAGTTATGCTACCCTTTGTAGAATACGAAATGCCC-CACGTACGGGTCTTTCAACAGGACAATGACCCCAAACACACCAGCAAGAAAGCAAAGCAGTGG-TTCAGGGCAAACTCTGGCAAC---GTTTTGG-AG-TGGCCTACTGAGTCGCCTGACCTGAATTC--------------CATCGAAAA-	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.............................................................................................................CTTTGTAGAATACGAAATGCCC-........................................................................................................................................................	22	4	4.50	18	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	11	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTACCCT.............................................................................................................................................................................	27	5	3.00	15	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	3	1	1	0	4	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTACCCTT............................................................................................................................................................................	28	5	2.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	2	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTTTGTAGAATACGAAATGCCC-C.......................................................................................................................................................	23	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCT..................................................................................................................................................................................	22	6	1.67	10	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	3	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTAC................................................................................................................................................................................	24	6	1.67	10	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTACCC..............................................................................................................................................................................	26	6	1.50	9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTA.................................................................................................................................................................................	23	6	1.50	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTACC...............................................................................................................................................................................	25	6	1.33	8	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGACA..........................................................................................................................................................................................	24	5	1.20	6	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGGACAATGACCCCAAACACACCAGC...........................................................................................................	26	4	1.00	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................CAAACACACCAGCAAGAAAGCAAAGCAG............................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................ATGGATCAGCACGTGTATGTG..............................................................................................................................................................................................................	21	8	1.00	8	0	0	0	0	1	3	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TATC-----ATGGAGACAGTTATGCTACCCT.............................................................................................................................................................................	26	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATG................................................................................................................................................................................................................	24	8	0.75	6	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................ATCAGCACGTGTATGTGA.............................................................................................................................................................................................................	18	7	0.71	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGC...................................................................................................................................................................................	21	6	0.67	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................ATC-----ATGGAGACAGTTATGCTACCCT.............................................................................................................................................................................	25	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTTTGTAGAATACGAAATGCC..........................................................................................................................................................	21	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGACAATGACCCCAAACACACCAGC...........................................................................................................	27	4	0.50	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................TGCTACCCTTTGTAGAATACGAAATGCC..........................................................................................................................................................	28	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTAT................................................................................................................................................................................	24	6	0.50	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGGACAATGACCCCAAACACACCA.............................................................................................................	24	4	0.50	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AACAGGACAATGACCCCAAACACACC..............................................................................................................	26	4	0.50	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AAAACCATCATGGATCAGCACGT.....................................................................................................................................................................................................................	23	7	0.43	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATGTGAA............................................................................................................................................................................................................	28	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................ATC-----ATGGAGACAGTTATGCTACCCTT............................................................................................................................................................................	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................GAGACAGTTATGCTACCCTTTGTAGA......................................................................................................................................................................	26	5	0.40	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTTTGTAGAATACGAAATGC...........................................................................................................................................................	20	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................TGTATGTGAATATC-----ATGGAGACAG.........................................................................................................................................................................................	24	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TATC-----ATGGAGACAGTTATGCTACCC..............................................................................................................................................................................	25	6	0.33	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TGTGAATATC-----ATGGAGACAGTTATGC...................................................................................................................................................................................	26	6	0.33	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTC.................................................................................................................................................................................	23	6	0.33	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................C-----ATGGAGACAGTTATGCTACC...............................................................................................................................................................................	21	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGACAATGACCCCAAACACA................................................................................................................	22	6	0.33	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTAA................................................................................................................................................................................	24	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGA............................................................................................................................................................................................	22	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................ATC-----ATGGAGACAGTTATGCTACCC..............................................................................................................................................................................	24	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................AGCACGTGTATGTGAATATC-----ATG................................................................................................................................................................................................	23	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATGTGA.............................................................................................................................................................................................................	27	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................CATGGATCAGCACGTGTATGTGA.............................................................................................................................................................................................................	23	7	0.29	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ACATTG-----------------------------------GAG-AAAACCATCATGGA..............................................................................................................................................................................................................................	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TTCAACAGGACAATGACCCCA......................................................................................................................	21	4	0.25	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGGACAATGACCCCAAACACACCAGCA..........................................................................................................	27	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ACATTG-----------------------------------GAG-AAAACCATCATGGATC............................................................................................................................................................................................................................	25	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................GGACAATGACCCCAAACACACCAGCAA.........................................................................................................	27	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................TTGTAGAATACGAAATGCCC-........................................................................................................................................................	20	4	0.25	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGGACAATGACCCCAAACACACCAG............................................................................................................	25	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................ACAGGACAATGACCCCAAACACACCAGC...........................................................................................................	28	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AACAGGACAATGACCCCAAACA..................................................................................................................	22	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGACAATGACCCCAAACACACCAG............................................................................................................	26	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................CCAGCAAGAAAGCAAAGC..............................................................................................	18	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AACAGGACAATGACCCCAAACACACCAGC...........................................................................................................	29	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TTG-----------------------------------GAG-AAAACCATCATGGATCA...........................................................................................................................................................................................................................	23	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGACAATGACCCCAAACACACCAGCC..........................................................................................................	28	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGGACAATGACCCCAAACACACC..............................................................................................................	23	4	0.25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AACAGGACAATGACCCCAAACC..................................................................................................................	22	4	0.25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CAGGACAATGACCCCAAACACACCAGCA..........................................................................................................	28	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CTTTGTAGAATACGAAATG............................................................................................................................................................	19	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGAC...........................................................................................................................................................................................	23	5	0.20	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................ATGACCCCAAACACACCAGCAAGAAA.....................................................................................................	26	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................GAGACAGTTATGCTACCCTTTG..........................................................................................................................................................................	22	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TATC-----ATGGAGACAGTTATGCTACCCTT............................................................................................................................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................AGTTATGCTACCCTTTGTAGA......................................................................................................................................................................	21	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TC-----ATGGAGACAGTTATGCTACCCTTTG..........................................................................................................................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................GAGACAGTTATGCTACCCTTTGTAG.......................................................................................................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGACAAA........................................................................................................................................................................................	26	5	0.20	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGACAGT........................................................................................................................................................................................	26	5	0.20	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................TATGCTACCCTTTGTAGAATC...................................................................................................................................................................	21	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................GAG-AAAACCATCATGGATCAGCAC.......................................................................................................................................................................................................................	24	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGACT..........................................................................................................................................................................................	24	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................TGTATGTGAATATC-----ATGGAGACA..........................................................................................................................................................................................	23	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGACAG.........................................................................................................................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGAGACC..........................................................................................................................................................................................	24	5	0.20	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................ATC-----ATGGAGACAGTTATGCTAC................................................................................................................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTAAA...............................................................................................................................................................................	25	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTACCT..............................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................TATGTGAATATC-----ATGGAGACAGTTATG....................................................................................................................................................................................	27	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................GTGAATATC-----ATGGAGACAGTTATGC...................................................................................................................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TATC-----ATGGAGACAGTTATGCTACC...............................................................................................................................................................................	24	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................ACACACCAGCAAGAAAGCAAAG...............................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................C-----ATGGAGACAGTTATGCTACCC..............................................................................................................................................................................	22	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TC-----ATGGAGACAGTTATGCTAC................................................................................................................................................................................	21	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTGTATGTGAATATC-----ATGGACC............................................................................................................................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTATTG..............................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................TATGTGAATATC-----ATGGAGACA..........................................................................................................................................................................................	21	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................ATC-----ATGGAGACAGTTATGCTACC...............................................................................................................................................................................	23	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................CAAACACACCAGCAAGAAAGCAAAG...............................................................................................	25	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TCATGGATCAGCACGTGTATGTGAAC...........................................................................................................................................................................................................	26	7	0.14	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................AAACCATCATGGATCAGCACGTG....................................................................................................................................................................................................................	23	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AAAACCATCATGGATCAGCACG......................................................................................................................................................................................................................	22	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................TCAGCACGTGTATGTGAATATC-----ATG................................................................................................................................................................................................	25	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AAAACCATCATGGATCAGCACGTGTATG................................................................................................................................................................................................................	28	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTTA................................................................................................................................................................................	24	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AAAACCATCATGGATCAGCACGTG....................................................................................................................................................................................................................	24	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................ACCATCATGGATCAGCACGTGTATC................................................................................................................................................................................................................	25	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TCATGGATCAGCACGTGTATGTGA.............................................................................................................................................................................................................	24	7	0.14	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TCATGGATCAGCACGTGTATGTGAATAT.........................................................................................................................................................................................................	28	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................ATATC-----ATGGAGACAGTTATGCTT.................................................................................................................................................................................	23	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATCC...............................................................................................................................................................................................................	25	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATGTCTC............................................................................................................................................................................................................	28	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATGT...............................................................................................................................................................................................................	25	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................CCATCATGGATCAGCACGTGTAT.................................................................................................................................................................................................................	23	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGT.....................................................................................................................................................................................................................	19	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATC................................................................................................................................................................................................................	24	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTGTATGTG..............................................................................................................................................................................................................	26	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CCATCATGGATCAGCACGTG....................................................................................................................................................................................................................	20	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GATTCATCG-----------------------------------AATTAACGGCATCATGGATAGATTCCTGTATAAGGATATA-----TTGAATAGTGTTATGCTACCATATGCCGACGACAACATGCCT-CTGAAATGGAAATTTCAACAGGATAACGATCCTAAACACTGCTCCCGAGTAGTTAAGGGTTGG-TTGCATGAAAATAGAATTGAC---GTTATTG-AG-TGGCCAAGTCAGTCTCCAGATCTCAATCC--------------GATTGAGAA-	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
......................................................................................................TGCTACCATATGCCGACGACAACATGC...........................................................................................................................................................	27	2	0.50	1	1	0	0	0	0	0

droGri2

GATGCATAG-----------------------------------GACTAAAACAATTATGGATCATCACTTTTGATTGGAAAA----------------------------TTGTATTTGATGTAATGCCT-TTATTATGGGTCTTCCAACAGGACAAG----------------GCAAAAGAGCTCGGAAATGG-ATTGAGTACCATTTGTTTGACCTGATTTTGG-AC-TGACGTCCACAGTCCTTATATTAAAACAC--------------ACTCCATAA-	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dse_951

scaffold_1987:606-728 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads