ID:

dse_873

 Coordinate:

scaffold_150:6176-6326 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.0 -14.7 -14.5

Flybase annnotation

exon [dsec_GLEANR_17118:2]; CDS [Dsec\GM16197-cds]; intron [Dsec\GM16197-in]

No Repeatable elements found

mature
  1. scaffold_746:3851-3868 -
  2. dse_786  scaffold_1121:3022-3039 +
  3. dse_803  scaffold_1238:2783-2800 +
  4. scaffold_1551:531-548 -
  5. scaffold_3339:502-519 -
  6. scaffold_5954:423-440 -
  7. scaffold_6217:543-560 -
  8. scaffold_6422:206-223 -
  9. dse_876  scaffold_151:3052-3069 -
  10. scaffold_151:16262-16279 -
  11. dse_878  scaffold_151:23690-23707 -
  12. scaffold_151:30784-30801 -
  13. scaffold_151:63998-64015 -
  14. dse_873  scaffold_150:6284-6301 -
  15. scaffold_150:40275-40292 -
  16. dse_875  scaffold_150:47416-47433 -
  17. scaffold_178:15636-15653 -
  18. dse_922  scaffold_178:50985-51002 -
  19. scaffold_321:3092-3109 -
  20. scaffold_321:10369-10386 -
star
  1. dse_1546  scaffold_746:3789-3809 -
  2. dse_786  scaffold_1121:3081-3101 +
  3. dse_803  scaffold_1238:2842-2862 +
  4. scaffold_1551:469-489 -
  5. scaffold_3339:440-460 -
  6. scaffold_5954:361-381 -
  7. scaffold_6217:481-501 -
  8. dse_877  scaffold_151:9346-9366 -
  9. scaffold_151:16200-16220 -
  10. dse_878  scaffold_151:23628-23648 -
  11. scaffold_151:30722-30742 -
  12. scaffold_151:63936-63956 -
  13. dse_873  scaffold_150:6226-6246 -
  14. scaffold_150:40213-40233 -
  15. dse_875  scaffold_150:47354-47374 -
  16. dse_922  scaffold_178:50923-50943 -
  17. scaffold_321:3030-3050 -
  18. scaffold_321:10307-10327 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTCGTTTCGGGGCACTTGGGTCGCAGGAATGGCCATGGCTATTTCCTGAACTATGGTTTTAAGTTGACCAGCCGACCACCCTGACGCTTCCGGGTAACTTGACGACTTGATGGTTTCCGTTGGCCAGTCGCTTTTCTGTCGACCCACTGGACCAGCCCGTTGCCTTTGCTAACTAATCGGTTAACTCTTTCGCAAACGCAGAATCCCAATGCCACCGTCAAGCCTTTGATCCAAATGCCGTTGCTGGCCGC
***************************************************************************.............(((((.....(((((((..((((((((......))))).)))....)).)))))....)))))**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 M054
female body
 V115
head
 V113
male body
...........................................................................CCACCCTGACGCTTCCGG.............................................................................................................................................................. 18 0 20 0.15 3 3 0 0 0
........................................................TTTTAAGTTGACCAGCCGACC.............................................................................................................................................................................. 21 0 20 0.10 2 0 1 1 0
................TGGGTCGCAGGAATGGCCATGGCT................................................................................................................................................................................................................... 24 0 20 0.10 2 0 1 0 1
....................................................................................................................................................................................................................CACCGTCAAGCCTTTGATCCAAATGC............. 26 0 16 0.06 1 0 1 0 0
..............................................................................................................................................................................................................................CCTTTGATCCAAATGCCGTTG........ 21 0 17 0.06 1 0 1 0 0
...............................................................................................................................................................................................................................CTTTGATCCAAATGCCGTTGC....... 21 0 17 0.06 1 0 0 1 0
..................................................................................................................................CTTTTCTGTCGACCCACTGGA.................................................................................................... 21 0 18 0.06 1 0 1 0 0
.................................................................................................................................GCTTTTCTGTCGACCCACTTGACCAGCTC............................................................................................. 29 2 18 0.06 1 0 1 0 0
..........................................................................................................................................................................AACTAATCGGTTAACTCTTTCGCAAAC...................................................... 27 0 19 0.05 1 0 0 0 1
..........................................................................ACCACCCTGACGCTTCCGG.............................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0
........................................................................................................................................TGTCGACCCACTGGACCAGCCT............................................................................................. 22 1 20 0.05 1 0 0 0 1
................................................................................CTGACGCTTCCGGGTAACTTG...................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1
.............ACTTGGGTCGCAGGAATGGCC......................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1
..CGTTTCGGGGCACTTGGGTCG.................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
.....................CGCAGGAATGGCCATGGCTAT................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
.......................................................................................................................................CTGTCGACCCACTGGACCAGCC.............................................................................................. 22 0 20 0.05 1 0 1 0 0
........GGGGCACTTGGGTCGCAGG................................................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0
........................................................................CGACCACCCTGACGCTTCC................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0
............................................................AAGTTGACCAGCCGACCACCC.......................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
...........GCACTTTGGTCGCAGGAATGGC.......................................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 1
......................................................................................................................................................................................................CAGAATCCCAATGCCACCGT................................. 20 0 20 0.05 1 1 0 0 0
.....................CGCAGGAATGACCATGGCT................................................................................................................................................................................................................... 19 1 20 0.05 1 0 1 0 0
....................................................................CAGCCGACCACCCTGACGCTT.................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0
.....................................................................................................................................TTCTGTCGACCCACTGGACCA................................................................................................. 21 0 20 0.05 1 0 0 0 1
.....TTCAGGGCACTTTGGTCGC................................................................................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0
..........................................................................ACCCCCCTGACGCTTCCGG.............................................................................................................................................................. 19 1 20 0.05 1 1 0 0 0
................TGGGTCGCAGGAATGGCCAT....................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0
.......CGGGGCACTTGGGTCGCAGGAAT............................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 1
................TGGGTCGCAGGAATGGCCA........................................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0
..............................................................GTTGACCAGCCGACCACCCTG........................................................................................................................................................................ 21 0 20 0.05 1 0 0 1 0
........................................................................CGACCACCCTGACGCTTCCGG.............................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0
........................................................................................................................................TGTCGACCCACAGGACCAGCC.............................................................................................. 21 1 20 0.05 1 1 0 0 0
.............ACTTGGGTCGCAGGAATGG........................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0
TTCGTTTCGGGGCACTTGGGTC..................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0
..CGTTTCGGGGCACTTGGGTC..................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1
.......................................................................................................................................................................................................AGAATCCCAATGCCACCGTC................................ 20 0 20 0.05 1 1 0 0 0
.....TTCGGGGCACTTGGGTCGCAGGAA.............................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
.....................CGCAGGAATGGCCATGGCT................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0
.....TTCAGGGCACTTTGGTCG.................................................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................AATCCCAATGCCACCGTCAAG............................. 21 0 20 0.05 1 0 0 1 0
....TTTCGGGGCACTTGGGTCGCA.................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0
...GTTTCGGGGCACTTGGGTCGCA.................................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
...........GCACTTGGGTCGCAGGAATGG........................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0
....................................................................................CGCTTCCGGGTAACTTGACGACTT............................................................................................................................................... 24 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

AAGCAAAGCCCCGTGAACCCAGCGTCCTTACCGGTACCGATAAAGGACTTGATACCAAAATTCAACTGGTCGGCTGGTGGGACTGCGAAGGCCCATTGAACTGCTGAACTACCAAAGGCAACCGGTCAGCGAAAAGACAGCTGGGTGACCTGGTCGGGCAACGGAAACGATTGATTAGCCAATTGAGAAAGCGTTTGCGTCTTAGGGTTACGGTGGCAGTTCGGAAACTAGGTTTACGGCAACGACCGGCG
****************************************************************************************************.............(((((.....(((((((..((((((((......))))).)))....)).)))))....)))))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V115
head
 M054
female body
 V114
embryo
 V113
male body
........................................................................................TGGCCCATTGAACTGCTGAACT............................................................................................................................................. 22 1 17 0.06 1 1 0 0 0
.........................................................................................GGCCCATTGAACTGCTGAAC.............................................................................................................................................. 20 0 17 0.06 1 1 0 0 0
...............................................................................................................................AGCGAAAACACAGCTGGGTGA....................................................................................................... 21 1 18 0.06 1 0 0 0 1
................................................................................................................................GCGAAAAGACAGCTGGGTGA....................................................................................................... 20 0 18 0.06 1 0 0 1 0
.................................................................................................................................................................................................................TCGGTGGCAGTTCGGAAACTAG.................... 22 1 19 0.05 1 1 0 0 0
......................................................................................................................................................................................TTGAGAAAGCGTTTGCGTCT................................................. 20 0 19 0.05 1 0 0 0 1
...............................................................................................................................................................................................................TTACGGTGGCAGTTCGGAAACT...................... 22 0 19 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................GCAGTTCGGAAACTAGGTTTA............... 21 0 19 0.05 1 0 0 1 0
....................................................................................................................................................CCGGGTCGGGCAAGGGAA..................................................................................... 18 2 20 0.05 1 0 1 0 0
.......................................................................GGCTGGTGGGACTGCGAAGGC............................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
................................GGTACCGATAAAGGACTTGAT...................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
................................................................ACTGGTCGGCTGGTGGGACT....................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................AGCGTTTGCGTCTTAGGGTTA......................................... 21 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................CGGGCAACGGAAACGGTTGGTT........................................................................... 22 2 20 0.05 1 1 0 0 0
...........CGTGAACCCAGCGTCCTTACC........................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0
........................................................................................................................................AGAACTGGGTGACCTGGT................................................................................................. 18 2 20 0.05 1 0 1 0 0
..................................................................................................................................................................GGAAACGATTGATTAGCCAAT.................................................................... 21 0 20 0.05 1 0 1 0 0
..GCAAAGCCCCGTGAACCCAGC.................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................TGTCTTAGGGTTACGCTGGCAG................................ 22 2 20 0.05 1 0 0 1 0
......................................................................................................................................................CGGTCGGGCAACGCAAACG.................................................................................. 19 2 20 0.05 1 0 0 0 1
.................................................................................................................................................................................................................CCGGGGGCAGTTAGGAAACT...................... 20 3 20 0.05 1 0 1 0 0
..........................................................................................................................................................................................................TAGGGTTACGGTGGCAGTTCG............................ 21 0 20 0.05 1 1 0 0 0
.......................................................................GGCTGGTGGGACTGCGAAG................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0
..GCAAAGTCCCGTGAAACCAGC.................................................................................................................................................................................................................................... 21 2 20 0.05 1 0 1 0 0
........................................................................................................................................ACAGCTGGGTGACCTGGTC................................................................................................ 19 0 20 0.05 1 1 0 0 0
..........TCGTGAACCCAGCGTCCTTACC........................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_150:6126-6376 - dse_873 TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-TTTCCTGAACTATGGTTTTAAGTTGA----CCAGCCGACCAC--------------CCTGACGCTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------A-------GTCGCT-TT---TCTGTC-----GACCCACTGGAC----CAG-----C-----CC--------------------------------------------------------------------------------------GTTGC--CTTTGC-TAACTAATCGGTT-A-----ACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGTCAAGCCTTTGATCCAAATGCCGTTGCTGGCCGC
droSim2 node_88769:299-553 + dsi_9594 TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-TTTCCTGAACTATGGTTTTAAGTAGA----CCAGCCGACCAC--------------CCTGACGCTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCGCT-TT---TCTGTC-----GACCCACTGGAC----CAG-----C-----CC--------------------------------------------------------------------------------------GTTGC--CTTTGC-TAACTAATCGGTT-A-----ACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGTCATGCCTTTGATCCAAATGCAGTTGCAGGCCGC
dm3 chrX:21499732-21500039 - TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-GTTCCGGAACTATGGTTTTAAGTAGA----CCAGCCGACCAC--------------CCTGACGGTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCGCT-TT---TTTGTC-----GACCCACTGGAC----CAG-----T-----CCGCTGCAAGTGATTT-TGTCTAGGGTAGCCTGGCGA----GCCAG-----GCGGAACC----C------------------------GTTGC--CTTCGC-TAACTAATCGACT-AATGAAACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGTCAAGCCTTTGATCCAAATGCCGTTGCAGGCCGC
droEre2 scaffold_4690:17961851-17962148 - TTGGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGAGCAG--------------CCTGACGCTTCCGGGT-AACTTGACGACTTGATGGCTTCCGTTGGC-C--------AGC---GAGTCTCT-TT----TTGTT-----GACCCACTGGAC----CAG-----C-----CCGCTGCAAGTGATTT-TGTCCAGGGGAACCTGGCGA----AA--------------CC----C------------------------GTTGC--CTTCGC-CAACTAATCAGCT-AATGAAACTTTTTTGCAA---ATGCAGAATCCCAATGCCACCGTCAAGCCTTTGATTCAACAGCCGTTGCAGGATGC
droYak3 X:20621554-20621852 - TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGACCAG--------------CCTAACGCTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCTCT-TT---TTTGTT-----GACCCACTGGAC----TAG-----C-----CCGCTGCAAGTGATTT-TGTCCGGGGGAACCTGGCGA----AA--------------CC----C------------------------GTTGC--CATCGC-CAACTAATAAGCT-AATGAAACTCTTTTGCAA---ACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACAGCCGTTGCAGATCGT
droEug1 scf7180000409453:8982-9288 + TTCGTTTTGGGGCACT-CGGGTCGCAGGAATGGCCATGGCTA-CATCCTGAACTATGGTTTTTAGTAGA----CCAGCAGACCAG--------------CATGACGCATCCGGTT-TACTTGACGACTTGATGGTTTCCGTTGCC-A--------AGC---GAGTCTCTATT---TTTGTT-----GACCATGTGGAT----CAG-----C-----ACGCTGAAAGTGATGT-TGCCCGGCGGAATTTAGCGACGAAAACAG-----G------C----A------------------------GAAAC--CTTTGC-CAACTAATTCGCT-AATTAAACTCTTTTGCAA---ACGCAGAACCCCAATGCCATCGACAAGCCTTTGATTCAACAGCCATTGCAATCCAT
droBia1 scf7180000302421:82838-83138 - TTCGTTTCGGGGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGACCAG--------------CCTGACGCT-CCGGGT-TACCTGACGCCCTGATGGTGGCCGTCGGC-C--------AGC---GAGTCTCCTTT---TTAGTT-----GACCCACAGGAC----TAG-----C------CGCTGCAAGTGATCT-TATCCAGGGGAAC-ACCCGAAGAAAA--------------CA----T------------------------GTTCC--CTTCCT-CTACTAATCGGCT-AATGAAACTCTTTTGCAA---ACGCAGAATCCCAATGCTATCGCCAAGCCTTTGATCCAACAGCCGTTGCAGGGCTC
droTak1 scf7180000415769:383979-384295 + TTCGTTTCGGGGCACT-CGGGTCGCAGGAATGGTTATGGCTAAGTTCCTGAACTATGGTTTTTAGTAGG----CCAGCCGACCAG--------------CCTGACGCTTCCGGGTTGACTTGACGACTTGATGGCTTCCGTTGGC-C-AGAGGCCAGC---GAGTCTCT-TT-TTTTGGTT-----GACCCACTGGAT----TAG-----TGGATCACGCTGCAAGTGATTT-T--CCA-------------A--------------------------CAGGGGTTGCTCCCGT---TCTCCCGTTTT-TCTTCGC-CAACTGACCAACT-AATGAAACTCTTTTGCAA---ACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACAGCCGTTGCAG-CAGC
droEle1 scf7180000491087:960909-961213 + TTCGTTTCGGGGCACT-CGGGTCGCAGAAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTATA----CCAGCCGAGCAG--------------CCTGAGACTTCCGTGT-AACTTGACGATTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCTCT-TT---TTTGTT-----AGCACACTGGAT----TAG-----C-----CCGCTGCAAGTGATTT-TGTCCAGGGGAATCAAGCGACGAAAA--------------CT----C------------------------GTTCC--CTTCACCCCACTAATCAGCT-AATGAAACTCTTTTGCAAA--ACCCAGAATCCCAGTGCCAGCGTCAAGCCCTTGATCCAACCGCCATTGCAGGGCAA
droRho1 scf7180000777745:57712-58015 + TTCGTTTCGGAGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGACCAG--------------CCTGACGCTTTCGTGT-AACTTGACGACTTGATTGTTTCCGTTGGC-C--------AGC---GAGTCTCT-TT---TTTGTT-----AACACACTGGAT----AAG-----C-----CCGCTGCAAGTGATTT-TGTCTAGGGGAACCAAGCGACGAAAA--------------TT----C------------------------GTTCC--CTTCAC-CCACTAATCCGCTAAATGAAACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACCGCCGTTGCAGGGCAA
droFic1 scf7180000453926:449800-450101 - TTCGTTTCGGGGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGACGACCAG--------------CCTGATGCTTCCGGGT-GTCTTGATGACTTGATGGTTTCCGTTTGC-C--------AGC---GAGTCCCT-TT---TTAGTT-----GACCCACTGGAT----TAG-----C-----CCGCTGCGAGAGATTT-TGTCCAGGGGATCATAGCGACAAAAA---------------T----C------------------------CATCC--CTTCGC-CAACTAATCAGCT-AACGAAACTCTTTTGCAA---ACGCAGAACCCCAATGCCAGCGCCAAGCCCTTGATCCAACAGCCGTTGCAGGCCAC
droKik1 scf7180000302798:89921-90235 - TTCGTTTCGGGTCACT-CGGGTCGCAGGAATGGCCATGGCTAGGTTCCTGAACTATGGTTTTTAGTAGA----CCAGCTGAC-AG--------------CCCGG-----CCGTG--AGCCTGATGACTTGATGGTTTG-GTTTCCCCTCGAGCCAAGC---GAGTCTCT-TTATTTTGGTT-----AAACCACTGGATT---TAG-----C-----CCGCTGCGAGTACTTTATTTCCAGCGGATCCTTGAGACGACT---AGCAAGG-----CC----T------------------------ATG-GC-TTTC-C-TTCCTAAGCAACT-AATGAAACTCTTTTGCCAACCACGCAGAATCCCAATGCCACTCCCAAACCATTGGTCCAGC---CGGCGCTGGGTCC
droAna3 scaffold_13117:2967578-2967894 - TACGGTTCGGTGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGATTAACCAGCCAACCAGACAGCTTGACAGCCCCTGACGCTTCCGTGT-ATGATGA-GACTCGATGGGTTCCGTTGGCAC--------AGC---AACTATTT-TT---TTTTTTTTTTGTAA--TAT----ATATCCATTATATGGATT-------------------------GCATATATTAGACAA-----AGCAAGG-----CCCCTTC------------------------AGG-GG-GCTC-T-CACCCATTCGACT-AATTAAATCATTTTGCAA---AAACAGAACCCGAATGCCAACGCCAAGCCGTTGATCCAGCCTCCGTTGCAGGCCGC
droBip1 scf7180000396696:167523-167837 + TACGGTTCGGTGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGATTAACCAGCCAACCAGACAGCCTGACAGCCCCTGACGCTTCCGTTT-ATGATGA-AACTCGATGGGTTCCGTTGGCAA--------AGCCTCAA----CA-TT---TTTTTT-----AAA--TAT----ATATCCGTAATATGGATTCCATA--------------------GCATATATTAAAC------ATGCACAG-----CCCCCTT------------------------CTG-GG-GTTC-C-CACCCATTCCACT-AACTAAATAATTTTGCAA---AAACAGAATCCGAATGCCAACGCCCAGCCGTTGATCCAGCCTCCATTGCAGGCCGC
dp5 XL_group1a:1174197-1174286 + TTCGTTTTGGGTCACT-TTGGTTGCAGGAATGGTCATGGCTA-ATTCCTGAACTATGGTTTTTAGTAGG----AC---CGAGCTC--------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGTCTCCCG--------------------------------------------------------------------------------------------------------
droPer2 scaffold_26:1289508-1289597 + TTCGTTTTGGGTCACT-TTGGTTGCAGGAATGGTCATGGCTA-ATTCCTGAACTATGGTTTTTAGTAGG----AC---CGAGCTC--------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGTCTCCCG--------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:5871440-5871502 - TTCGTTT-GGGGCACT-TTGGTTGTAGGAATGGTCATAGCTA-ATTCCTGAACTATAGTTTTTAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:2598392-2598465 - TTCGTTT--GGGCACTTTGGGTTGTAGGAGTGGTCATGGCTA--TTCCTGAACTATGGTTTTTAGTAGA----ACCGCCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:16762457-16762521 - TTCGTTT--GGGCACTTTGGGTCGTAGGAGTGGTCATGGCTA--TTCCTGAACTATGGTTTTTAGTAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15081:1180513-1180586 + TTCGTTT--GGGCACTTTGTGTTGTTGGAGTGGTCATGGCTA--TTCCTGAACTATGGTTTTTAGTAGA----ACCGCCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-TTTCCTGAACTATGGTTTTAAGTTGA----CCAGCCGACCAC--------------CCTGACGCTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------A-------GTCGCT-TT---TCTGTC-----GACCCACTGGAC----CAG-----C-----CC--------------------------------------------------------------------------------------GTTGC--CTTTGC-TAACTAATCGGTT-A-----ACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGTCAAGCCTTTGATCCAAATGCCGTTGCTGGCCGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................CCAC--------------CCTGACGCTTCCGG........................................................................................................................................................................................................................................................................................................18200.1530030
..........................................................TTTTAAGTTGA----CCAGCCGACC......................................................................................................................................................................................................................................................................................................................................21200.1021001
.................TGGGTCGCAGGAATGGCCATGGCT................................................................................................................................................................................................................................................................................................................................................................................24200.1021100
..................................................................................................................................................................................................................................................................................................................................................................................CACCGTCAAGCCTTTGATCCAAATGC.............26160.0611000
............................................................................................................................................................................................................................................................................................................................................................................................CCTTTGATCCAAATGCCGTTG........21170.0611000
.............................................................................................................................................................................................................................................................................................................................................................................................CTTTGATCCAAATGCCGTTGC.......21170.0610001
.......................................................................................................................................................................CT-TT---TCTGTC-----GACCCACTGGA....................................................................................................................................................................................................................21180.0611000
...............................................................................................................................................................................................................................................................................................................................AACTAATCGGTT-A-----ACTCTTTCGCAA---AC......................................................27190.0510100
................................................................................ACCAC--------------CCTGACGCTTCCGG........................................................................................................................................................................................................................................................................................................19200.0510010
.................................................................................................................................................................................TGTC-----GACCCACTGGAC----CAG-----C-----CT--------------------------------------------------------------------------------------.........................................................................................................22200.0510100
....................................................................................................CTGACGCTTCCGGGT-AACTTG...............................................................................................................................................................................................................................................................................................21200.0510100
.............ACT-TGGGTCGCAGGAATGGCC......................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
..CGTTTCGGGGCACT-TGGGTCG.................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
......................CGCAGGAATGGCCATGGCTA-T.............................................................................................................................................................................................................................................................................................................................................................................21200.0510010
................................................................................................................................................................................CTGTC-----GACCCACTGGAC----CAG-----C-----C................................................................................................................................................................................................22200.0511000
........GGGGCACT-TGGGTCGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
..............................................................................CGACCAC--------------CCTGACGCTTCC..........................................................................................................................................................................................................................................................................................................19200.0510010
..............................................................AAGTTGA----CCAGCCGACCAC--------------CC....................................................................................................................................................................................................................................................................................................................21200.0511000
....................................................................................................................................................................................................................................................................................................................................................................CAGAATCCCAATGCCACCGT.................................20200.0510010
..........................................................................CAGCCGACCAC--------------CCTGACGCTT............................................................................................................................................................................................................................................................................................................21200.0510001
...........................................................................................................................................................................T---TCTGTC-----GACCCACTGGAC----CA.............................................................................................................................................................................................................21200.0510100
.................TGGGTCGCAGGAATGGCCAT....................................................................................................................................................................................................................................................................................................................................................................................20200.0510001
.......CGGGGCACT-TGGGTCGCAGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................23200.0510100
.................TGGGTCGCAGGAATGGCCA.....................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
................................................................GTTGA----CCAGCCGACCAC--------------CCTG..................................................................................................................................................................................................................................................................................................................21200.0510001
..............................................................................CGACCAC--------------CCTGACGCTTCCGG........................................................................................................................................................................................................................................................................................................21200.0511000
.............ACT-TGGGTCGCAGGAATGG........................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
TTCGTTTCGGGGCACT-TGGGTC..................................................................................................................................................................................................................................................................................................................................................................................................22200.0510001
..CGTTTCGGGGCACT-TGGGTC..................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100
.....................................................................................................................................................................................................................................................................................................................................................................AGAATCCCAATGCCACCGTC................................20200.0510010
.....TTCGGGGCACT-TGGGTCGCAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
......................CGCAGGAATGGCCATGGCT................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
.......................................................................................................................................................................................................................................................................................................................................................................AATCCCAATGCCACCGTCAAG.............................21200.0510001
....TTTCGGGGCACT-TGGGTCGCA...............................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
...GTTTCGGGGCACT-TGGGTCGCA...............................................................................................................................................................................................................................................................................................................................................................................................22200.0510010
...........GCACT-TGGGTCGCAGGAATGG........................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
........................................................................................................CGCTTCCGGGT-AACTTGACGACTT........................................................................................................................................................................................................................................................................................24200.0511000
droSim2
TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-TTTCCTGAACTATGGTTTTAAGTAGA----CCAGCCGACCAC--------------CCTGACGCTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCGCT-TT---TCTGTC-----GACCCACTGGAC----CAG-----C-----CC--------------------------------------------------------------------------------------GTTGC--CTTTGC-TAACTAATCGGTT-A-----ACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGTCATGCCTTTGATCCAAATGCAGTTGCAGGCCGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................TGATCCAAATGCAGTTGCAGGCC..2312.00200200000000000000
...........................................................TTTAAGTAGA----CCAGCCGACCAC--------------CCTGA.................................................................................................................................................................................................................................................................................................................2732.00600000024000000000
....................................TGGCTA-TTTCCTGAACTATGGTTTTAAG........................................................................................................................................................................................................................................................................................................................................................2822.00400000021010000000
..........................................................................................................................................................................TT---TCTGTC-----GACCCACTGGAC----C..............................................................................................................................................................................................................2131.33440000000000000000
...........................................TTTCCTGAACTATGGTTTTAAGTAGA----................................................................................................................................................................................................................................................................................................................................................2621.00200000020000000000
................................................TGAACTATGGTTTTAAGTAGA----CCAGC...........................................................................................................................................................................................................................................................................................................................................2631.00300010010010000000
.....................................................................................................................................................................CGCT-TT---TCTGTC-----GACCCACTGGAC----C..............................................................................................................................................................................................................2530.67200200000000000000
..................................................................................CAC--------------CCTGACGCTTCCGG........................................................................................................................................................................................................................................................................................................1730.67200000000002000000
..................................................................................................................................................................................................................................................................................................................TGC--CTTTGC-TAACTAATCGGTT-A-----ACTC...................................................................2730.67200200000000000000
................................................................GTAGA----CCAGCCGACCAC--------------CCTG..................................................................................................................................................................................................................................................................................................................2130.67200000002000000000
.............................................................TAAGTAGA----CCAGCCGACCAC--------------C.....................................................................................................................................................................................................................................................................................................................2130.67200000000000002000
.............................................TCCTGAACTATGGTTTTAAGTAGA----CC..............................................................................................................................................................................................................................................................................................................................................2630.67200000002000000000
.......................................................................................................................................................................................................................................................................................................................CTTTGC-TAACTAATCGGTT-A-----A......................................................................2130.67200000011000000000
...........................................................................................................TTCCGGGT-AACTTGACGACTTGATGGT..................................................................................................................................................................................................................................................................................2730.67200000000000002000
..............................................................................................................CGGGT-AACTTGACGACTTGATGGTT.................................................................................................................................................................................................................................................................................2530.67200000011000000000
..............................................................AAGTAGA----CCAGCCGACCAC--------------CC....................................................................................................................................................................................................................................................................................................................2130.67200000000000020000
..........................................................TTTTAAGTAGA----CCAGCCGACCAC--------------CC....................................................................................................................................................................................................................................................................................................................2530.67200000011000000000
..............................................................................................................................................................................................CACTGGAC----CAG-----C-----CC--------------------------------------------------------------------------------------GTTGC--CT................................................................................................2130.67220000000000000000
....................................TGGCTA-TTTCCTGAACTATGG...............................................................................................................................................................................................................................................................................................................................................................2120.50100000001000000000
....................................................................................................................................................................................................................................................................................................................................ATCGGTT-A-----ACTCTTTCGCAA---ACGCAG..................................................2640.50200000002000000000
........................................TA-TTTCCTGAACTATGGTTTTAAGTAGA----CC..............................................................................................................................................................................................................................................................................................................................................3020.50100000001000000000
.............................ATGGCCATGGCTA-TTTCCTGA......................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000000000
......................................GCTA-TTTCCTGAACTATGGTT.............................................................................................................................................................................................................................................................................................................................................................2120.50100000010000000000
............CACT-TGGGTCGCAGGAATGGCCATGGCT................................................................................................................................................................................................................................................................................................................................................................................2840.50201100000000000000
........................................TA-TTTCCTGAACTATGGTTTTAAGTAGA----................................................................................................................................................................................................................................................................................................................................................2820.50100000000010000000
.....................................................................................................................ACTTGACGACTTGATGGTTTCCGTTG..........................................................................................................................................................................................................................................................................2640.50200000000200000000
..................................................................................................................T-AACTTGACGACTTGATGGTT.................................................................................................................................................................................................................................................................................2140.50200000010000010000
..............................................................AAGTAGA----CCAGCCGACCAC--------------CCTGACGC..............................................................................................................................................................................................................................................................................................................2730.33100000010000000000
............................................................................................................................................................................................................................................................................................................................C-TAACTAATCGGTT-A-----ACTCTTTCGC.............................................................2530.33100000010000000000
............................................................TTAAGTAGA----CCAGCCGACCAC--------------CCTGA.................................................................................................................................................................................................................................................................................................................2630.33100000000100000000
..........................................................................CAGCCGACCAC--------------CCTGACGCTTCCGGA.......................................................................................................................................................................................................................................................................................................2630.33100000001000000000
...............................................................AGTAGA----CCAGCCGACCAC--------------CCTGACG...............................................................................................................................................................................................................................................................................................................2530.33100000000010000000
.................TGGGTCGCAGGAATGGCCATGGCTA-T.............................................................................................................................................................................................................................................................................................................................................................................2630.33100000000001000000
..........................................................TTTTAAGTAGA----CCAGCCGACC......................................................................................................................................................................................................................................................................................................................................2130.33100000010000000000
..............................................................AAGTAGA----CCAGCCGACCAC--------------C.....................................................................................................................................................................................................................................................................................................................2030.33110000000000000000
...........................................................TTTAAGTAGA----CCAGCCGACCAC--------------CCTGACGC..............................................................................................................................................................................................................................................................................................................3030.33100000010000000000
..........................................................TTTTAAGTAGA----CCAGCCGACCAC--------------......................................................................................................................................................................................................................................................................................................................2330.33100000000000010000
................................................................................................................................................................................CTGTC-----GACCCACTGGAC----CAG-----C-----C................................................................................................................................................................................................2230.33100100000000000000
..............................................................................................................CGGGT-AACTTGACGACTTGATGGTTTC...............................................................................................................................................................................................................................................................................2730.33100000000010000000
..............................................CCTGAACTATGGTTTTAAGTAGA----C...............................................................................................................................................................................................................................................................................................................................................2430.33100000000100000000
...........................................................................................................TTCCGGGT-AACTTGACGACT.........................................................................................................................................................................................................................................................................................2030.33100000001000000000
................................................................................ACCAC--------------CCTGACGCTTCCGG........................................................................................................................................................................................................................................................................................................1930.33100000000001000000
...........................................................................................................................................................................T---TCTGTC-----GACCCACTGGAC----CAG-----C-----CC--------------------------------------------------------------------------------------GT.......................................................................................................2730.33100000001000000000
....................................................................................................................................................................................C-----GACCCACTGGAC----CAG-----C-----CC--------------------------------------------------------------------------------------GTTGC--CTT...............................................................................................2730.33100000001000000000
.............................................................................................................CCGGGT-AACTTGACGACTTGG......................................................................................................................................................................................................................................................................................2130.33110000000000000000
............................................TTCCTGAACTATGGTTTTAAGTAGA----................................................................................................................................................................................................................................................................................................................................................2530.33100000000000010000
...............................................................................................................................................................................................................................................................................................................................AACTAATCGGTT-A-----ACTCTTTCGCAA---ACGC....................................................2930.33100100000000000000
............................................TTCCTGAACTATGGTTTTAAGTAGA----C...............................................................................................................................................................................................................................................................................................................................................2630.33100000001000000000
.............................................TCCTGAACTATGGTTTTAAGTAGA----CCA.............................................................................................................................................................................................................................................................................................................................................2730.33100000000010000000
.................................................................................CCAC--------------CCTGACGCTTCCGG........................................................................................................................................................................................................................................................................................................1830.33100000000001000000
........................................................................................................................................................................T-TT---TCTGTC-----GACCCACTGGA....................................................................................................................................................................................................................2030.33110000000000000000
...........................................................TTTAAGTAGA----CCAGCCGACCAC--------------CCTG..................................................................................................................................................................................................................................................................................................................2630.33100000001000000000
...........................................................TTTAAGTAGA----CCAGCCGACCAC--------------C.....................................................................................................................................................................................................................................................................................................................2330.33100000001000000000
.............................................................................................................CCGGGT-AACTTGACGACTTGA......................................................................................................................................................................................................................................................................................2130.33100000000001000000
.............................................TCCTGAACTATGGTTTTAAGTAGA----CCAGC...........................................................................................................................................................................................................................................................................................................................................2930.33100000010000000000
............................................................................................................TCCGGGT-AACTTGACGACTTGATGGTT.................................................................................................................................................................................................................................................................................2730.33100000000000001000
............................................................................................................TCCGGGT-AACTTGACGACTTGATGGT..................................................................................................................................................................................................................................................................................2630.33100000001000000000
...............T-TGGGTCGCAGGAATGGCCATGGCTA-TT............................................................................................................................................................................................................................................................................................................................................................................2830.33100000000000010000
.............................................................................................................CCGGGT-AACTTGACGACTTGATG....................................................................................................................................................................................................................................................................................2330.33100000000100000000
...........................................................................AGCCGACCAC--------------CCTGACGCTTCCGGAA-.....................................................................................................................................................................................................................................................................................................2630.33100000010000000000
....................................................................................................................................................................................................................................................................................................................................ATCGGTT-A-----ACTCTTTCGCAA---AC......................................................2240.25110000000000000000
.............ACT-TGGGTCGCAGGAATGGCCATGG..................................................................................................................................................................................................................................................................................................................................................................................2540.25100010000000000000
...........................................................................................................................CGACTTGATGGTTTCCGTTGGC-.......................................................................................................................................................................................................................................................................2240.25100000010000000000
..CGTTTCGGGGCACT-TGGGTCG.................................................................................................................................................................................................................................................................................................................................................................................................2140.25100000010000000000
..................................................................................................................T-AACTTGACGACTTGATGGTTT................................................................................................................................................................................................................................................................................2240.25100000000000001000
...........................................................................................................................................................AGC---GAGTCGCT-TT---TCTGTC-----GA.............................................................................................................................................................................................................................2140.25100000001000000000
.......................................................................................................................TTGACGACTTGATGGTTTCCGTTGGC-.......................................................................................................................................................................................................................................................................2640.25100000001000000000
....................................................................................................................................................................................................................................................................................................................................................TCTTTCGCAA---ACGCAGAATCCCAATGCC......................................2840.25100000000000001000
..................................................................................................................T-AACTTGACGACTTGATGGTTTCCGT............................................................................................................................................................................................................................................................................2640.25100000001000000000
...............T-TGGGTCGCAGGAATGGCCATGGC.................................................................................................................................................................................................................................................................................................................................................................................2440.25100000000001000000
....................................................................................................................................................................................................................................................................................................................................ATCGGTT-A-----ACTCTTTCGCAA---ACGCAGAA................................................2840.25100000000000010000
.......................................................................................................................................................................................................................................................................................................................................GGTT-A-----ACTCTTTCGCAA---ACGC....................................................2140.25100000010000000000
..............CT-TGGGTCGCAGGAATGGCCAT....................................................................................................................................................................................................................................................................................................................................................................................2240.25100000000001000000
.....................................................................................................................................................................................................................................................................................................................................TCGGTT-A-----ACTCTTTCGCAA---ACGCAG..................................................2540.25101000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCGGTT-A-----ACTCTTTCGCAA---ACGCAGA.................................................2640.25100000001000000000
............................AATGGCCATGGCTA-T.............................................................................................................................................................................................................................................................................................................................................................................1540.25100000000001000000
.....................................................................................................................................................................................................................................................................................................................................TCGGTT-A-----ACTCTTTCGCAA---ACGCAGAA................................................2740.25100000000100000000
.................................................................................................................GT-AACTTGACGACTTGATGGT..................................................................................................................................................................................................................................................................................2140.25110000000000000000
................................................................................................................................TGATGGTTTCCGTTGGC-C--------AGC---GAGTCGT.................................................................................................................................................................................................................................................2840.25100000001000000000
.................................................................................................................GT-AACTTGACGACTTGATGGTTTCCGTT...........................................................................................................................................................................................................................................................................2840.25100010000000000000
........................................................................................................................TGACGACTTGATGGTTTCCGTTGGC-.......................................................................................................................................................................................................................................................................2540.25100000010000000000
........................................................................................................................................................................................................................................................................................................................................GTT-A-----ACTCTTTCGCAA---ACGCA...................................................2140.25100000010000000000
............CACT-TGGGTCGCAGGAATGGC.......................................................................................................................................................................................................................................................................................................................................................................................2140.25100000000001000000
.................................................................................................................................................................................................................................................................................................................................CTAATCGGTT-A-----ACTCTTTCGC.............................................................2140.25100010000000000000
.................................................................................................................GT-AACTTGACGACTTGATGG...................................................................................................................................................................................................................................................................................2040.25100000000100000000
.....................................................................................................................................................................................................................................................................................................................................TCGGTT-A-----ACTCTTTCGCAA---AC......................................................2140.25100000001000000000
.............................................................................................................................ACTTGATGGTTTCCGTTGGC-C--------..............................................................................................................................................................................................................................................................2140.25100000010000000000
.................TGGGTCGCAGGAATGGCCATGGCTA-..............................................................................................................................................................................................................................................................................................................................................................................2540.25100000000001000000
.....TTCGGGGCACT-TGGGTCGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................2250.20100000000001000000
.......CGGGGCACT-TGGGTCGCAGGA............................................................................................................................................................................................................................................................................................................................................................................................2150.20100000000000010000
......TCGGGGCACT-TGGGTCGCAGGA............................................................................................................................................................................................................................................................................................................................................................................................2250.20100000010000000000
......TCGGGGCACT-TGGGTCGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................2150.20100000000001000000
.......................GCAGGAATGGCCATGGC.................................................................................................................................................................................................................................................................................................................................................................................1750.20100000000001000000
...........GCACT-TGGGTCGCAGGAATGG........................................................................................................................................................................................................................................................................................................................................................................................2160.17100000000000010000
..........GGCACT-TGGGTCGCAGGAATG.........................................................................................................................................................................................................................................................................................................................................................................................2160.17100100000000000000
............CACT-TGGGTCGCAGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................1860.17101000000000000000
dm3
TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-GTTCCGGAACTATGGTTTTAAGTAGA----CCAGCCGACCAC--------------CCTGACGGTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCGCT-TT---TTTGTC-----GACCCACTGGAC----CAG-----T-----CCGCTGCAAGTGATTT-TGTCTAGGGTAGCCTGGCGA----GCCAG-----GCGGAACC----C------------------------GTTGC--CTTCGC-TAACTAATCGACT-AATGAAACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGTCAAGCCTTTGATCCAAATGCCGTTGCAGGCCGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................TCCGGGT-AACTTGACGACTTGATGGT..................................................................................................................................................................................................................................................................................26116.00160000000000000000000000000000000000000000000010000000000000110000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000010100000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGCCTTTGATCCAAATGCCGTTGC.......25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011800000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TCCGGGT-AACTTGACGACTTGATGG...................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000300000000000000000000200000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............T-TGGGTCGCAGGAATGGCCATGGCT................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTCCGGGT-AACTTGACGACTTGATGGT..................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000300000
............................................................................................................TCCGGGT-AACTTGACGACTTGATGGTT.................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................TTCCGTTGGC-C--------AGC---GAGTCGCT-TT---..........................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............CACT-TGGGTCGCAGGAATGGCCATGGC.................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTCCGGGT-AACTTGACGACTTGATGG...................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000001000
........................................................................................................................................................................T-TT---TTTGTC-----GACCCACTGGAC----CAG-----T-----CCGC.............................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................TCCGGAACTATGGTTTTAAGTAGA----CCA.............................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TTCCGGAACTATGGTTTTAAGTAGA----C...............................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................TTGTC-----GACCCACTGGAC----CAG-----T-----CCGC.............................................................................................................................................................................................2513.0030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGGGTCGCAGGAATGGCCATGGCTA-GT............................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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............................................................................................................................................................................................................................TGCAAGTGATTT-TGTCTAGGGTAGC...................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................CAG-----GCGGAACC----C------------------------GTTGC--CTTCGC-TAACTAA....................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................AATGGCCATGGCTA-GTTCCGGA......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................AATGCCACCGTCAAGCCTTTGATC....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................TTAAGTAGA----CCAGCCGACCAC--------------C.....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................CGACTTGATGGTTTCCGTTGGC-C--------AGC---GA......................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................CAC--------------CCTGACGGTTCCGGGT-AACTTGACGAC..........................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................TGTC-----GACCCACTGGAC----CAG-----T-----CCGC.............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................T-TT---TTTGTC-----GACCCACTGGAC----CAG-----T-----CC...............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................ATGGCCATGGCTA-GTTCCGGAAC....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AATCCCAATGCCACCGTCAAGCCTTTGA......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................T-AATGAAACTCTTTCGCAA---ACGCAGAA................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATGGTTTCCGTTGGC-C--------AGC---GA......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CT-TGGGTCGCAGGAATGGC.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
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................................................................................................................................TGATGGTTTCCGTTGGC-C--------AGC---........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ATGGTTTTAAGTAGA----CCAGCCGACCAC--------------T.....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACT-TGGGTCGCAGGAATGGCCATGGC.................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................TTTCCGTTGGC-C--------AGC---GAGTCGCT-TT---..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................ACCAC--------------CCTGACGGTTCCGGGT-AACTTGAC.............................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TT---TTTGTC-----GACCCACTGGAC----CAG-----T-----CCGCT............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCGCAGGAATGGCCATGGCTA-GTTCCGG.......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCGACT-AATGAAACTCTTTCGCAA---ACGCA...................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CGTCAAGCCTTTGATCCAAATGCCGTT.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................TT-TGTCTAGGGTAGCCTGGCGA----GCCAG-----G.............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................ATGGTTTCCGTTGGC-C--------AGC---GAGTC...................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................CCGGAACTATGGTTTTAAGTAGA----CCA.............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TCCGGGT-AACTTGACGACTTGAT.....................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACT-TGGGTCGCAGGAATGGCCATGG..................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACT-TGGGTCGCAGGAATGGC.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................CGCAGGAATGGCCATGGCTA-GTTCCGGA......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GCGA----GCCAG-----GCGGAACC----C------------------------GTT......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GCGA----GCCAG-----GCGGAACC----C------------------------GTTGC--..................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................CTTGACGACTTGATGGTTTCC..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCGCAGGAATGGCCATGGCTA-..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................GCGA----GCCAG-----GCGGAACC----C------------------------G........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............ACT-TGGGTCGCAGGAATGGCC......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TC-----GACCCACTGGAC----CAG-----T-----CCGCTGCAAAA......................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CT-TGGGTCGCAGGAATGGCCATG...................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................C-C--------AGC---GAGTCGCT-TT---TTTGTC-----GACCCACTG......................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TTTCCGTTGGC-C--------AGC---GAGTCGCT-T..............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ACTAATCGACT-AATGAAACTCTTTCGC.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCGTTTCGGGGCACT-TGGG....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................G-----GCGGAACC----C------------------------GTTGC--CTTCGC-TAACTAAT...................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTTAAGTAGA----CCAGCCGACCAC--------------CC....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CCCAATGCCACCGTCAAGC............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TTGATGGTTTCCGTTGGC-C--------AGC---GAGTCG..................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................GCCGACCAC--------------CCTGACGGTTCCGGGT-AAC..................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATCCCAATGCCACCGTCAAGCCTTTGAT.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TTGATGGTTTCCGTTGGC-C--------AGC---GAG.....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................................................................................................GCCAG-----GCGGAACC----C------------------------GTTGC--..................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGATCCAAATGCCGTTGCAG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................GCCGACCAC--------------CCTGACGGTTCCGGGT-.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGGGTCGCAGGAATGGCCATGGCTA-G.............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGATCCAAATGCCGTTG........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................AC--------------CCTGACGGTTCCGGGT-AACTTGAC.............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TTCCGTTGGC-C--------AGC---GAGTC...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TGTCTAGGGTAGCCTGGCGA----GCCAG-----G.............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TCCGGAACTATGGTTTTAAGTAGA----CCAGCC..........................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AACTATGGTTTTAAGTAGA----CCAGCCGAC.......................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AATGGCCATGGCTA-GTTCCGGAAC....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEre2
TTGGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGAGCAG--------------CCTGACGCTTCCGGGT-AACTTGACGACTTGATGGCTTCCGTTGGC-C--------AGC---GAGTCTCT-TT----TTGTT-----GACCCACTGGAC----CAG-----C-----CCGCTGCAAGTGATTT-TGTCCAGGGGAACCTGGCGA----AA--------------CC----C------------------------GTTGC--CTTCGC-CAACTAATCAGCT-AATGAAACTTTTTTGCAA---ATGCAGAATCCCAATGCCACCGTCAAGCCTTTGATTCAACAGCCGTTGCAGGATGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................GAACTATGGTTTTTAGTAGA----CCAGC...........................................................................................................................................................................................................................................................................................................................................2511.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................GTCAAGCCTTTGATTCAACAGCCGT..........2511.0011000000
.....................................................................................................................................................................CTCT-TT----TTGTT-----GACCCACTG......................................................................................................................................................................................................................2011.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................TCAAGCCTTTGATTCAACAGCCGT..........2411.0011000000
droYak3
TTCGTTTCGGGGCACT-TGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGACCAG--------------CCTAACGCTTCCGGGT-AACTTGACGACTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCTCT-TT---TTTGTT-----GACCCACTGGAC----TAG-----C-----CCGCTGCAAGTGATTT-TGTCCGGGGGAACCTGGCGA----AA--------------CC----C------------------------GTTGC--CATCGC-CAACTAATAAGCT-AATGAAACTCTTTTGCAA---ACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACAGCCGTTGCAGATCGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............CT-TGGGTCGCAGGAATGGCC......................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
....................................................................................................................................GGTTTCCGTTGGC-C--------AGC---GAGT....................................................................................................................................................................................................................................................2111.00101000000000
......TCGGGGCACT-TGGGTCGCAGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................CTCT-TT---TTTGTT-----GACCCACT.......................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................CTCT-TT---TTTGTT-----GACCCACTG......................................................................................................................................................................................................................2111.00100100000000
..................................................................................................................................ATGGTTTCCGTTGGC-C--------AGC---GAGT....................................................................................................................................................................................................................................................2311.00100000010000
droEug1
TTCGTTTTGGGGCACT-CGGGTCGCAGGAATGGCCATGGCTA-CATCCTGAACTATGGTTTTTAGTAGA----CCAGCAGACCAG--------------CATGACGCATCCGGTT-TACTTGACGACTTGATGGTTTCCGTTGCC-A--------AGC---GAGTCTCTATT---TTTGTT-----GACCATGTGGAT----CAG-----C-----ACGCTGAAAGTGATGT-TGCCCGGCGGAATTTAGCGACGAAAACAG-----G------C----A------------------------GAAAC--CTTTGC-CAACTAATTCGCT-AATTAAACTCTTTTGCAA---ACGCAGAACCCCAATGCCATCGACAAGCCTTTGATTCAACAGCCATTGCAATCCATSizeHit CountTotal NormTotal
No Reads
droBia1
TTCGTTTCGGGGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGACCAG--------------CCTGACGCT-CCGGGT-TACCTGACGCCCTGATGGTGGCCGTCGGC-C--------AGC---GAGTCTCCTTT---TTAGTT-----GACCCACAGGAC----TAG-----C------CGCTGCAAGTGATCT-TATCCAGGGGAAC-ACCCGAAGAAAA--------------CA----T------------------------GTTCC--CTTCCT-CTACTAATCGGCT-AATGAAACTCTTTTGCAA---ACGCAGAATCCCAATGCTATCGCCAAGCCTTTGATCCAACAGCCGTTGCAGGGCTCSizeHit CountTotal NormTotal
No Reads
droTak1
TTCGTTTCGGGGCACT-CGGGTCGCAGGAATGGTTATGGCTAAGTTCCTGAACTATGGTTTTTAGTAGG----CCAGCCGACCAG--------------CCTGACGCTTCCGGGTTGACTTGACGACTTGATGGCTTCCGTTGGC-C-AGAGGCCAGC---GAGTCTCT-TT-TTTTGGTT-----GACCCACTGGAT----TAG-----TGGATCACGCTGCAAGTGATTT-T--CCA-------------A--------------------------CAGGGGTTGCTCCCGT---TCTCCCGTTTT-TCTTCGC-CAACTGACCAACT-AATGAAACTCTTTTGCAA---ACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACAGCCGTTGCAG-CAGCSizeHit CountTotal NormTotal
No Reads
droEle1
TTCGTTTCGGGGCACT-CGGGTCGCAGAAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTATA----CCAGCCGAGCAG--------------CCTGAGACTTCCGTGT-AACTTGACGATTTGATGGTTTCCGTTGGC-C--------AGC---GAGTCTCT-TT---TTTGTT-----AGCACACTGGAT----TAG-----C-----CCGCTGCAAGTGATTT-TGTCCAGGGGAATCAAGCGACGAAAA--------------CT----C------------------------GTTCC--CTTCACCCCACTAATCAGCT-AATGAAACTCTTTTGCAAA--ACCCAGAATCCCAGTGCCAGCGTCAAGCCCTTGATCCAACCGCCATTGCAGGGCAASizeHit CountTotal NormTotal
No Reads
droRho1
TTCGTTTCGGAGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGCCGACCAG--------------CCTGACGCTTTCGTGT-AACTTGACGACTTGATTGTTTCCGTTGGC-C--------AGC---GAGTCTCT-TT---TTTGTT-----AACACACTGGAT----AAG-----C-----CCGCTGCAAGTGATTT-TGTCTAGGGGAACCAAGCGACGAAAA--------------TT----C------------------------GTTCC--CTTCAC-CCACTAATCCGCTAAATGAAACTCTTTCGCAA---ACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACCGCCGTTGCAGGGCAASizeHit CountTotal NormTotal
No Reads
droFic1
TTCGTTTCGGGGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGA----CCAGACGACCAG--------------CCTGATGCTTCCGGGT-GTCTTGATGACTTGATGGTTTCCGTTTGC-C--------AGC---GAGTCCCT-TT---TTAGTT-----GACCCACTGGAT----TAG-----C-----CCGCTGCGAGAGATTT-TGTCCAGGGGATCATAGCGACAAAAA---------------T----C------------------------CATCC--CTTCGC-CAACTAATCAGCT-AACGAAACTCTTTTGCAA---ACGCAGAACCCCAATGCCAGCGCCAAGCCCTTGATCCAACAGCCGTTGCAGGCCACSizeHit CountTotal NormTotal
No Reads
droKik1
TTCGTTTCGGGTCACT-CGGGTCGCAGGAATGGCCATGGCTAGGTTCCTGAACTATGGTTTTTAGTAGA----CCAGCTGAC-AG--------------CCCGG-----CCGTG--AGCCTGATGACTTGATGGTTTG-GTTTCCCCTCGAGCCAAGC---GAGTCTCT-TTATTTTGGTT-----AAACCACTGGATT---TAG-----C-----CCGCTGCGAGTACTTTATTTCCAGCGGATCCTTGAGACGACT---AGCAAGG-----CC----T------------------------ATG-GC-TTTC-C-TTCCTAAGCAACT-AATGAAACTCTTTTGCCAACCACGCAGAATCCCAATGCCACTCCCAAACCATTGGTCCAGC---CGGCGCTGGGTCCSizeHit CountTotal NormTotal
No Reads
droAna3
TACGGTTCGGTGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGATTAACCAGCCAACCAGACAGCTTGACAGCCCCTGACGCTTCCGTGT-ATGATGA-GACTCGATGGGTTCCGTTGGCAC--------AGC---AACTATTT-TT---TTTTTTTTTTGTAA--TAT----ATATCCATTATATGGATT-------------------------GCATATATTAGACAA-----AGCAAGG-----CCCCTTC------------------------AGG-GG-GCTC-T-CACCCATTCGACT-AATTAAATCATTTTGCAA---AAACAGAACCCGAATGCCAACGCCAAGCCGTTGATCCAGCCTCCGTTGCAGGCCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGCCGTTGATCCAG.................1911.001100000
...................................ATGGCTA-GTTCCTGAACTATGGTTTTT..........................................................................................................................................................................................................................................................................................................................................................2711.001010000
...........GCACT-CGGGTCGCAGGAATGGCCATGGCC................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
............................................................................................................................GACTCGATGGGTTCCGTTGGCAC--------AGC---........................................................................................................................................................................................................................................................2611.001000001
......TCGGTGCACT-CGGGTCGCAGGAATGGC.......................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
TACGGTTCGGTGCACT-CGGGTCGCAGGAATGGCCATGGCTA-GTTCCTGAACTATGGTTTTTAGTAGATTAACCAGCCAACCAGACAGCCTGACAGCCCCTGACGCTTCCGTTT-ATGATGA-AACTCGATGGGTTCCGTTGGCAA--------AGCCTCAA----CA-TT---TTTTTT-----AAA--TAT----ATATCCGTAATATGGATTCCATA--------------------GCATATATTAAAC------ATGCACAG-----CCCCCTT------------------------CTG-GG-GTTC-C-CACCCATTCCACT-AACTAAATAATTTTGCAA---AAACAGAATCCGAATGCCAACGCCCAGCCGTTGATCCAGCCTCCATTGCAGGCCGCSizeHit CountTotal NormTotal
No Reads
dp5
TTCGTTTTGGGTCACT-TTGGTTGCAGGAATGGTCATGGCTA-ATTCCTGAACTATGGTTTTTAGTAGG----AC---CGAGCTC--------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGTCTCCCG--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........GGTCACT-TTGGTTGCAGGAATGGTC......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
..........GTCACT-TTGGTTGCAGGA............................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
TTCGTTTTGGGTCACT-TTGGTTGCAGGAATGGTCATGGCTA-ATTCCTGAACTATGGTTTTTAGTAGG----AC---CGAGCTC--------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGTCTCCCG--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........GGTCACT-TTGGTTGCAGGAATGGTC......................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droWil2
TTCGTTT-GGGGCACT-TTGGTTGTAGGAATGGTCATAGCTA-ATTCCTGAACTATAGTTTTTAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....TT-GGGGCACT-TTGGTTGTAGGAATG.........................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..............CT-TTGGTTGTAGGAATGGT.......................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........GCACT-TTGGTTGTAGGAATG.........................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
TTCGTTT--GGGCACTTTGGGTTGTAGGAGTGGTCATGGCTA--TTCCTGAACTATGGTTTTTAGTAGA----ACCGCCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.TCGTTT--GGGCACTTTGGGTTGTA...............................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
..CGTTT--GGGCACTTTGGGTTGTAGGAGT..........................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TTCGTTT--GGGCACTTTGGGTCGTAGGAGTGGTCATGGCTA--TTCCTGAACTATGGTTTTTAGTAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTCGTTT--GGGCACTTTGTGTTGTTGGAGTGGTCATGGCTA--TTCCTGAACTATGGTTTTTAGTAGA----ACCGCCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:54 PM