ID:

dse_856

 Coordinate:

scaffold_15:194664-194814 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.3 -20.3 -20.2

Flybase annnotation

CDS [Dsec\GM11374-cds]; exon [dsec_GLEANR_11604:2]; intron [Dsec\GM11374-in]

No Repeatable elements found

mature
  1. scaffold_3215:233-253 -
  2. scaffold_11991:973-993 -
  3. dse_856  scaffold_15:194786-194806 +
  4. scaffold_15:368352-368372 +
  5. scaffold_15:460034-460054 -
  6. scaffold_12269:767-787 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCAATCCATTTTTTGAATTTGTGGCTACATACCGTAGAAAACATCGAGCCCTAAAACAACAACGCGTAATCGTATCAAAAGCAGCGGTTTCGTGGAAGGCTTTATCAAAATCTCAAAAAAATCGCTACCGCAAAAAGGTACGCATTCATTTTTTAATTGAACATTCATATTATGGAGATTATTAATTTGTATCATTTCAGGCGAGCGATGAACGCCATCGGCGTCGTAGAAATGCTGATAAGAAAGCCAG
**************************************************.............((((.((((((..........)))))).))))((..((........((((((.........((((((.......)))).)).((((.........))))(((.......)))))))))........)).)).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V113
male body		 V115
head
 M054
female body
 V114
embryo
............................................................................................................................................................................ATGGAGATTATTAATTTGTAT.......................................................... 21 0 6 32.33 194 182 12 0 0
..........................................................................................................................................................................TTATGGAGATTATTAATTTGT............................................................ 21 0 7 7.43 52 52 0 0 0
..........................................................................................................................................................................................TTTGTATCATTTCAGGCTCGC............................................ 21 2 6 7.17 43 40 3 0 0
..............................................................................................................................................................................................TATCATTTCAGGCTCGCGATG........................................ 21 2 7 3.71 26 26 0 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCGAT......................................... 21 2 6 3.67 22 21 1 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCGATT........................................ 22 3 6 2.50 15 15 0 0 0
........................................................................................................................................................................TATTATGGAGATTATTAATTT.............................................................. 21 0 10 2.30 23 21 2 0 0
.........................................................................................................................................................................................ATTTGTATCATTTCAGGCTCG............................................. 21 2 11 2.27 25 24 1 0 0
..................................................................................................................................................................................................ATTTCAGGCTCGCGATGAACA.................................... 21 3 11 2.18 24 23 1 0 0
............................CATACCGTAGAAAACATCGAG.......................................................................................................................................................................................................... 21 0 14 2.00 28 27 1 0 0
............................................................................................................................................................................................TGTATCATTTCAGGCTCGCGA.......................................... 21 2 6 1.67 10 10 0 0 0
.................................................................................................................................................................................................CATTTCAGGCTCGCGATGAAC..................................... 21 2 9 1.67 15 12 3 0 0
........................................................................................................................................................................................AATTTGTATCATTTCAGGCTC.............................................. 21 2 11 1.45 16 14 1 1 0
..............................................................................................................................................................................................TATCATTTCAGGCTCGCGATGT....................................... 22 3 7 1.43 10 9 1 0 0
...........................................................................................................................................................................................TTGTATCATTTCAGGCTCGCGT.......................................... 22 3 6 1.33 8 8 0 0 0
......................................................................................................................................................................CATATTATGGAGATTATTAAT................................................................ 21 0 9 1.33 12 11 1 0 0
..............................TACCGTAGAAAACATCGAGCC........................................................................................................................................................................................................ 21 0 13 1.31 17 17 0 0 0
..........TTTTTGAATTTGTAGCTACAT............................................................................................................................................................................................................................ 21 1 12 1.17 14 11 3 0 0
.........TTTTTTGAATTTGTAGCTACA............................................................................................................................................................................................................................. 21 1 12 1.00 12 12 0 0 0
............................................TCGAGCCCTAAAACAACAACG.......................................................................................................................................................................................... 21 0 11 1.00 11 10 1 0 0
.............................................................................................................................................................................TGGAGATTATTAATTTGTATC......................................................... 21 0 6 1.00 6 5 1 0 0
.................................CGTAGAAAACATCGAGCCCTA..................................................................................................................................................................................................... 21 0 13 0.85 11 11 0 0 0
..................................GTAGAAAACATCGAGCCCTAA.................................................................................................................................................................................................... 21 0 13 0.85 11 11 0 0 0
...........................................ATCGAGCCCTAAAACAACAACG.......................................................................................................................................................................................... 22 0 11 0.73 8 8 0 0 0
............................................................................................................................................................................................TGTATCATTTCAGGCTCGCGT.......................................... 21 3 6 0.67 4 3 1 0 0
.......................................AAACATCGAGCCCTAAAACAA............................................................................................................................................................................................... 21 0 12 0.67 8 8 0 0 0
....................TGTAGCTACATACCGTAGAGA.................................................................................................................................................................................................................. 21 2 15 0.67 10 9 1 0 0
.....................................GAAAACATCGAGCCCTAAAAC................................................................................................................................................................................................. 21 0 13 0.62 8 8 0 0 0
.....................................GAAAACATCGAGCCCTAAAA.................................................................................................................................................................................................. 20 0 13 0.62 8 8 0 0 0
.................ATTTGTAGCTACATACCGTAG..................................................................................................................................................................................................................... 21 1 11 0.55 6 4 2 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCGT.......................................... 20 3 8 0.50 4 4 0 0 0
................................................................................................................................................................TGCATTCATATTATGGAGATT...................................................................... 21 2 8 0.50 4 4 0 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCGA.......................................... 20 2 6 0.50 3 3 0 0 0
...........TTTTGAATTTGTAGCTACATA........................................................................................................................................................................................................................... 21 1 12 0.50 6 6 0 0 0
.......................................................................................................................................................................................TAATTTGTATCATTTCAGGCT............................................... 21 1 10 0.50 5 4 0 1 0
.......CATTTTTTGAATTTGTAGCTA............................................................................................................................................................................................................................... 21 1 12 0.50 6 6 0 0 0
..................................................................................................................................................................................................ATTTCAGGCTCGCGATGAAC..................................... 20 2 9 0.44 4 4 0 0 0
...........................................................................................................................................................................TATGGAGATTATTAATTTGT............................................................ 20 0 7 0.43 3 3 0 0 0
.............................ATACCGTAGAAAACATCGAGC......................................................................................................................................................................................................... 21 0 12 0.42 5 5 0 0 0
..............TGAATTTGTAGCTACATACCG........................................................................................................................................................................................................................ 21 1 12 0.42 5 5 0 0 0
...............GAATTTGTAGCTACATACCGT....................................................................................................................................................................................................................... 21 1 12 0.42 5 5 0 0 0
.......................................AAACATCGAGCCCTAAAACA................................................................................................................................................................................................ 20 0 13 0.38 5 5 0 0 0
..........................................................................................................................................................................................TTTGTATCATTTCAGGCTCGCT........................................... 22 3 6 0.33 2 2 0 0 0
............................................................................................................................................................................................TGTATCATTTCAGGCTCGCG........................................... 20 2 6 0.33 2 2 0 0 0
..........................................................................................................................................................................................TTTGTATCATTTCAGGCTAGC............................................ 21 1 6 0.33 2 2 0 0 0
...........................................................................................................................................................................TATGGAGATTATTAATTTGTAT.......................................................... 22 0 6 0.33 2 2 0 0 0
............................................................................................................................................................................................TGTATCATTTCAGGCTCGCGAT......................................... 22 2 6 0.33 2 2 0 0 0
............................................................................................................................................................................ATGGAGATTATTAATTTGTATT......................................................... 22 1 6 0.33 2 2 0 0 0
.................................................................................................................................................................................................CATTTCAGGCTCGCGATGAACT.................................... 22 3 9 0.33 3 3 0 0 0
...............................ACCGTAGAAAACATCGAGCCC....................................................................................................................................................................................................... 21 0 13 0.31 4 3 0 1 0
......................................AAAACATCGAGCCCTAAAACA................................................................................................................................................................................................ 21 0 13 0.31 4 4 0 0 0
.........TTTTTTGAATTTGTAGCTAC.............................................................................................................................................................................................................................. 20 1 13 0.31 4 4 0 0 0
.......................................................................................................................................................................................TAATTTGTATCATTTCAGGCTT.............................................. 22 2 10 0.30 3 3 0 0 0
.......................................................................................................................................................................ATATTATGGAGATTATTAAT................................................................ 20 0 10 0.30 3 3 0 0 0
........................................................................................................................................................................................AATTTGTATCATTTCAGGCTCG............................................. 22 2 10 0.30 3 3 0 0 0
..............................................................................................................................................................................................TATCATTTCAGGCTCGCGATGA....................................... 22 2 7 0.29 2 2 0 0 0
.....................................................................................................................................................................................................TCAGGCACGCGTTGAACGCCA................................. 21 3 8 0.25 2 0 1 0 1
...............GAATTTGTAGCTACATACCG........................................................................................................................................................................................................................ 20 1 12 0.25 3 3 0 0 0
.............TTGAATTTGTAGCTACATACC......................................................................................................................................................................................................................... 21 1 12 0.25 3 3 0 0 0
....................................AGAAAACATCGAGCCCTAAAA.................................................................................................................................................................................................. 21 0 13 0.23 3 3 0 0 0
........ATTTTTTGAATTTGTAGCTAC.............................................................................................................................................................................................................................. 21 1 13 0.23 3 3 0 0 0
...................................TAGAAAACATCGAGCCCTAAA................................................................................................................................................................................................... 21 0 13 0.23 3 3 0 0 0
.........................................................................................................................................................................ATTATGGAGATTATTAATTTG............................................................. 21 0 9 0.22 2 1 1 0 0
.................................................................................................................................................................................................CATTTCAGGCTCGCGATGAA...................................... 20 2 9 0.22 2 2 0 0 0
..................................................................................................................................................................................................ATTTCAGGCTCGCGATGAA...................................... 19 2 9 0.22 2 2 0 0 0
...............................................................................................................................................................................................ATCATTTCAGGCTCGCGATG........................................ 20 2 10 0.20 2 2 0 0 0
......................................................................................................................................................................................TTAATTTGTATCATTTCAGGC................................................ 21 0 10 0.20 2 2 0 0 0
.............................................CGAGCCCTAAAACAACAACGCTTA...................................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0
.............................................CGAGCCCTAAAACAACAACGC......................................................................................................................................................................................... 21 0 11 0.18 2 2 0 0 0
................AATTTGTAGCTACATACCGTA...................................................................................................................................................................................................................... 21 1 11 0.18 2 2 0 0 0
...........................................................................................................................................................................................TTGTATCATTTCAGGCTCGCG........................................... 21 2 6 0.17 1 1 0 0 0
.........................................................................................................................................................................................ATTTGTATCATTTCAGGCTCGC............................................ 22 2 6 0.17 1 1 0 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCCAT......................................... 21 3 6 0.17 1 1 0 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCGATC........................................ 22 3 6 0.17 1 1 0 0 0
.............................................................................................................................................................................TGGAGATTATTAATTTGTAT.......................................................... 20 0 6 0.17 1 1 0 0 0
............................................................................................................................................................................ATGGGGATTATTAATTTGTAT.......................................................... 21 1 6 0.17 1 1 0 0 0
............................................................................................................................................................................................TGTATCATTTCAGGCTCGCGATA........................................ 23 3 6 0.17 1 1 0 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCGATA........................................ 22 3 6 0.17 1 1 0 0 0
..............................TACCGTAGAAAACATCGAGCCC....................................................................................................................................................................................................... 22 0 13 0.15 2 2 0 0 0
.....................................GAAAACATCGAGCCCTAAAACA................................................................................................................................................................................................ 22 0 13 0.15 2 2 0 0 0
..............................TACCGTAGAAAACATCGAGCCT....................................................................................................................................................................................................... 22 1 13 0.15 2 2 0 0 0
...................................TAGAAAACATCGAGCCCTAA.................................................................................................................................................................................................... 20 0 13 0.15 2 2 0 0 0
............................................................................................................................................................................ATGGAGATTATTAATTTGT............................................................ 19 0 7 0.14 1 1 0 0 0
............................................................................................................................................................................................TGTATCATTTCAGGCTCGCAA.......................................... 21 3 7 0.14 1 1 0 0 0
..........................................................................................................................................................................TTATGGAGATTATTAAATTGTT........................................................... 22 2 7 0.14 1 1 0 0 0
............................................................................................................................................................................ATGGAGATTATTAATGTGTA........................................................... 20 1 7 0.14 1 1 0 0 0
..........................................................................................................................................................................TTATGTAGATTATTAATTTGT............................................................ 21 1 7 0.14 1 1 0 0 0
........................................................................................................................................................................TATTATGGAGATTATTAATTTGT............................................................ 23 0 7 0.14 1 1 0 0 0
............................CATACCGTAGAGAACTTCGAG.......................................................................................................................................................................................................... 21 2 14 0.14 2 2 0 0 0
.............................................................................................................................................................................................GTATCATTTCAGGCTCGCGTT......................................... 21 3 7 0.14 1 1 0 0 0
........ATTTTTTGAATTTGTAGCTA............................................................................................................................................................................................................................... 20 1 14 0.14 2 2 0 0 0
...............................................AGACCTAAAACAACAACGCGTA...................................................................................................................................................................................... 22 1 7 0.14 1 1 0 0 0
......................................................................TAGTATCAAAAGGAGCGGTGT................................................................................................................................................................ 21 3 7 0.14 1 0 1 0 0
..........................................................................................................................................................................TTATGGAGATTATTAATTGGT............................................................ 21 1 7 0.14 1 1 0 0 0
....................TGTAGCTACATACCGTAGAG................................................................................................................................................................................................................... 20 2 15 0.13 2 2 0 0 0
.........................................ACATCGAGCCCTAAAACAACAACGCGT....................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0
...............................................................................................................................................................................................ATCATTTCAGGCTCGCGATGA....................................... 21 2 9 0.11 1 1 0 0 0
......................................................................................................................................................................CATATTATGGAGGTTATTAAT................................................................ 21 1 9 0.11 1 1 0 0 0
..............................................................................................................................................................................................TATCATTTCACGCTCGCGATG........................................ 21 3 9 0.11 1 1 0 0 0
.....................................................................................................................................................................TCATATTATGGAGATTATTAA................................................................. 21 0 9 0.11 1 1 0 0 0
........................................................................................................................................................................TATTATGGAGATTATTAATTTG............................................................. 22 0 9 0.11 1 1 0 0 0
................................................................................................................................................................................................TCATTTCAGGCTCGCGATGTA...................................... 21 3 9 0.11 1 1 0 0 0
..............................................................................................................................................................................................TATCATTTCAGGCTCTCGATG........................................ 21 3 9 0.11 1 1 0 0 0
......................................................................................................................................................................CATATTATGGAAATTATTAAT................................................................ 21 1 9 0.11 1 1 0 0 0
.........................................................................................................................................................................................ATTTGTATCATTTCAGGCCCG............................................. 21 2 10 0.10 1 1 0 0 0
.......................................................................................................................................................................ATATTATGGAGATTATTAATT............................................................... 21 0 10 0.10 1 1 0 0 0
........................................................................................................................................................................TATTATGGAGATTATTAATT............................................................... 20 0 10 0.10 1 1 0 0 0
.................ATTTGTAGCTACATACCGTA...................................................................................................................................................................................................................... 20 1 11 0.09 1 1 0 0 0
.............................................CGAGCCCTAAAACAACAACG.......................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0
..............................................................................................................................................................................................CATCATTTCAGGCTCGCGATG........................................ 21 3 11 0.09 1 1 0 0 0
...............................................................................................................................................................TTGCATTCATATTATGGAGATT...................................................................... 22 3 11 0.09 1 1 0 0 0
.........................................................................................................................................................................................ATTTGTATCATTTCAGGCTCGA............................................ 22 3 11 0.09 1 1 0 0 0
......................TAGCTACATACCGTAGAGAA................................................................................................................................................................................................................. 20 2 11 0.09 1 1 0 0 0
...........................ACATACCGTAGAGAACTTCGA........................................................................................................................................................................................................... 21 2 11 0.09 1 1 0 0 0
.................ATTTGTAGCTACATACCGTAGA.................................................................................................................................................................................................................... 22 1 11 0.09 1 1 0 0 0
................AATTTGTAGCTACATACCGTAA..................................................................................................................................................................................................................... 22 2 11 0.09 1 1 0 0 0
............................................TCGCGCCCTAAAACAACAACG.......................................................................................................................................................................................... 21 1 11 0.09 1 1 0 0 0
..........................................................................................................................................................................................TTTGTATCATTTCAGGCTCG............................................. 20 2 11 0.09 1 1 0 0 0
...............................................................................................................................................................................................ATCATTTCAGGCTCGCGATTA....................................... 21 3 11 0.09 1 1 0 0 0
..........................................................................................................................................................................................TTTGTATCATTTCAGGATCGC............................................ 21 3 11 0.09 1 1 0 0 0
.................................................................................................................................................................................................CATTTCAGGCTCGCGATGGAC..................................... 21 3 12 0.08 1 1 0 0 0
.......................................AAACATCGAGCCCTAAAACAAC.............................................................................................................................................................................................. 22 0 12 0.08 1 1 0 0 0
.............TTGAATTTGTAGCTACATAC.......................................................................................................................................................................................................................... 20 1 12 0.08 1 1 0 0 0
............................CATACCGTAGAAAACATCGAGCCT....................................................................................................................................................................................................... 24 1 12 0.08 1 1 0 0 0
..........TTTTTGAATTTGTAGCTACATA........................................................................................................................................................................................................................... 22 1 12 0.08 1 1 0 0 0
........ATTTTTTGAATTTGTAGCTACA............................................................................................................................................................................................................................. 22 1 12 0.08 1 1 0 0 0
........................................................................................................................................................................................ACTTTGTATCATTTCAGGCTC.............................................. 21 3 12 0.08 1 1 0 0 0
........................................................................................................................................................................................AATTTGTATCATTTCAGGCTCC............................................. 22 3 12 0.08 1 1 0 0 0
..........................TACATACCGCAGAGAACTTCG............................................................................................................................................................................................................ 21 3 12 0.08 1 1 0 0 0
..................................................................................................................................................................................................ATTTCAGGCTCGCGATGACC..................................... 20 3 13 0.08 1 1 0 0 0
...................................TAGAAAACATCGAGCCCCAAA................................................................................................................................................................................................... 21 1 13 0.08 1 1 0 0 0
.........................................................................................................................................................................................ATTTGTATCGTTTCAGGCTCG............................................. 21 3 13 0.08 1 1 0 0 0
......................................AAAACATCAAGCCCTAAAAC................................................................................................................................................................................................. 20 1 13 0.08 1 0 0 1 0
...............................ACCGTAGAAAACATCGAGCCCTA..................................................................................................................................................................................................... 23 0 13 0.08 1 0 0 1 0
.................................CGTAGAAAACATCGAGCCCTATT................................................................................................................................................................................................... 23 2 13 0.08 1 1 0 0 0
......................................AAAACATCGAGCCCTAAAAC................................................................................................................................................................................................. 20 0 13 0.08 1 0 1 0 0
................................CCGTAGAAAACATCGAGCCCTT..................................................................................................................................................................................................... 22 1 13 0.08 1 1 0 0 0
.................................CGTAGAAACCATCGAGCCCTA..................................................................................................................................................................................................... 21 1 13 0.08 1 1 0 0 0
...............................ACCGTAGAAAACATCGCGCC........................................................................................................................................................................................................ 20 1 13 0.08 1 1 0 0 0
.....................................GAAAACATCGAGCCCTAACAC................................................................................................................................................................................................. 21 1 13 0.08 1 1 0 0 0
..................................GTAGAAAACATCGAGCCCAAA.................................................................................................................................................................................................... 21 1 13 0.08 1 1 0 0 0
..............................TACCGTAGAAAACATCGAGCCTA...................................................................................................................................................................................................... 23 2 13 0.08 1 1 0 0 0
..............................TACCGTAGAAAAAATCGAGC......................................................................................................................................................................................................... 20 1 13 0.08 1 1 0 0 0
..................................GTAGAAAACATCGAGCCCTA..................................................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0
.........ATTTTTGAATTTGTAGCTACA............................................................................................................................................................................................................................. 21 2 14 0.07 1 0 1 0 0
............................CATACCGTAGAAAACATCAAG.......................................................................................................................................................................................................... 21 1 14 0.07 1 1 0 0 0
...................TTGTAGCTACATACCGTAGAG................................................................................................................................................................................................................... 21 2 15 0.07 1 1 0 0 0
.........................CTACATACCGTAGAGAACTTC............................................................................................................................................................................................................. 21 2 15 0.07 1 1 0 0 0
..............TGACTTGGTGGCTACCTACC......................................................................................................................................................................................................................... 20 3 15 0.07 1 0 1 0 0
...................TTGTAGCTACATACCGTAGAGA.................................................................................................................................................................................................................. 22 2 15 0.07 1 0 1 0 0
.........TTTTTTGAATTTGTAGCTGCA............................................................................................................................................................................................................................. 21 2 18 0.06 1 1 0 0 0
...........TTTTGAATCTCTAGCTACATA........................................................................................................................................................................................................................... 21 3 20 0.05 1 0 1 0 0
..............TGACTTGGTGGCTACCTAC.......................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0
.............................ATACCGTAGAGAACTTCGAGA......................................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

TAGTTAGGTAAAAAACTTAAACACCGATGTATGGCATCTTTTGTAGCTCGGGATTTTGTTGTTGCGCATTAGCATAGTTTTCGTCGCCAAAGCACCTTCCGAAATAGTTTTAGAGTTTTTTTAGCGATGGCGTTTTTCCATGCGTAAGTAAAAAATTAACTTGTAAGTATAATACCTCTAATAATTAAACATAGTAAAGTCCGCTCGCTACTTGCGGTAGCCGCAGCATCTTTACGACTATTCTTTCGGTC
**************************************************.............((((.((((((..........)))))).))))((..((........((((((.........((((((.......)))).)).((((.........))))(((.......)))))))))........)).)).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V113
male body		 V115
head
 M054
female body
....................ACACCGATGTATGGCATCTTT.................................................................................................................................................................................................................. 21 0 11 4.91 54 49 3 2
......................ATCGATGTATGGCATCTCTTG................................................................................................................................................................................................................ 21 2 11 4.73 52 50 2 0
....................ACACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 22 0 11 4.18 46 45 1 0
........................CGATGTATGGCATCTTTTGTA.............................................................................................................................................................................................................. 21 0 11 3.09 34 32 2 0
......................ACCGATGTATGGCATCTTTTG................................................................................................................................................................................................................ 21 0 11 3.09 34 34 0 0
.....................CACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 21 0 11 2.00 22 22 0 0
...........................TGTATGGCATCTTTTGTAGCTC.......................................................................................................................................................................................................... 22 0 11 1.73 19 18 1 0
.....................CATCGATGTATGGCATCTCTT................................................................................................................................................................................................................. 21 2 11 1.45 16 15 1 0
...........................TGTATGGCATCTTTTGTAGC............................................................................................................................................................................................................ 20 0 11 1.27 14 14 0 0
........................CGATGTATGGCATCTCTTGAA.............................................................................................................................................................................................................. 21 2 15 0.93 14 14 0 0
..............................................................................................................................................................................................ATAGTAAAGTCCGAGCGCTAC........................................ 21 2 7 0.86 6 6 0 0
...........................TGTATGGCATCTTTTGTAGCT........................................................................................................................................................................................................... 21 0 11 0.73 8 7 1 0
..........................ATGTATGGCATCTCTTGAAGC............................................................................................................................................................................................................ 21 2 11 0.73 8 7 1 0
.......................TCGATGTATGGCATCTCTTG................................................................................................................................................................................................................ 20 2 15 0.67 10 10 0 0
............................GTATGGCATCTCTTGAAGCTC.......................................................................................................................................................................................................... 21 2 14 0.64 9 9 0 0
.........................TATGTATGGCATCTTTTGTAGC............................................................................................................................................................................................................ 22 1 11 0.45 5 5 0 0
...................AACACCGATGTATGGCATCTTT.................................................................................................................................................................................................................. 22 0 11 0.45 5 5 0 0
................................................................................................................................................................................................AGTAAAGTCCGAGCGCTACT....................................... 20 2 9 0.44 4 4 0 0
.............................TATGGCATCTCTTGAAGCTCT......................................................................................................................................................................................................... 21 3 20 0.40 8 8 0 0
........................TGATGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 22 1 11 0.36 4 4 0 0
.........................................................................................................................................................................................TAAACATAGTAAAGTCCGAGC............................................. 21 2 11 0.36 4 2 2 0
.................................................................................................................................................................................................GTAAAGTCCGAGCGCTACTTG..................................... 21 2 9 0.33 3 3 0 0
................................................................................................................................................................................................AGTAAAGTCCGAGCGCTACTT...................................... 21 2 9 0.33 3 3 0 0
.............................................................................................................................................................................................CATAGTAAAGTCCGAGCGCTA......................................... 21 2 6 0.33 2 2 0 0
.......................TCGATGTATGGCATCTCTTGA............................................................................................................................................................................................................... 21 3 15 0.33 5 5 0 0
........................................................................................................................................................................................TTAAACATAGTAAAGTCCGAGC............................................. 22 2 10 0.30 3 3 0 0
........................CGATGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 22 0 11 0.27 3 3 0 0
.........................AATGTATGGCATCTCTTGAAGC............................................................................................................................................................................................................ 22 3 11 0.27 3 2 1 0
.......................CCGATGTATGGCATCTTTTGT............................................................................................................................................................................................................... 21 0 11 0.27 3 3 0 0
.........................GATGTATGGCATCTCTTGAAG............................................................................................................................................................................................................. 21 2 15 0.27 4 3 1 0
........................TGATGTATGGCATCTCTTGAAG............................................................................................................................................................................................................. 22 3 15 0.27 4 4 0 0
.................................................................................................................................................................................................GTAAAGTCCGAGCGCTACTT...................................... 20 2 9 0.22 2 2 0 0
............................GTATGGCATCTTTTGTAGCTC.......................................................................................................................................................................................................... 21 0 14 0.21 3 2 1 0
.......................TCGATGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 23 1 11 0.18 2 2 0 0
.......................TGTATGTATGGCATCTTTTGTAGC............................................................................................................................................................................................................ 24 3 11 0.18 2 2 0 0
...................AACACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 23 0 11 0.18 2 2 0 0
................TTAAACACCGATGTATGGCAT...................................................................................................................................................................................................................... 21 0 11 0.18 2 2 0 0
.................TAAACACCGATGTATGGCATC..................................................................................................................................................................................................................... 21 0 11 0.18 2 2 0 0
.......................CCGATGTATGGCATCTTTTG................................................................................................................................................................................................................ 20 0 11 0.18 2 1 0 1
......................ATCGATGTATGGCATCTCTT................................................................................................................................................................................................................. 20 2 11 0.18 2 1 1 0
....................TCACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 22 1 11 0.18 2 2 0 0
................TTAAACATCGATGTATGGCAT...................................................................................................................................................................................................................... 21 1 11 0.18 2 2 0 0
.........................GATGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 21 0 11 0.18 2 2 0 0
............................................................................................................................................................................................ACATAGTACAGTCCGAGCGCT.......................................... 21 3 6 0.17 1 1 0 0
............................................................................................................................................................................................ACATAGTAAAGTCCGAGCGCT.......................................... 21 2 6 0.17 1 1 0 0
.....................ATCCGATGTATGGCATCTTTTG................................................................................................................................................................................................................ 22 2 14 0.14 2 2 0 0
..............................................................................................................................................................................................ATAGTAAAGTCCGAGCGCTA......................................... 20 2 7 0.14 1 1 0 0
............................GTATGGCATCTTTTGTAGC............................................................................................................................................................................................................ 19 0 14 0.14 2 2 0 0
...................................................................................TCGCTAAAGCAACTTCCGAAG................................................................................................................................................... 21 3 7 0.14 1 0 0 1
..............................................................................................................................................................................................ATAGTAAAGTCCGAGCGCTACT....................................... 22 2 7 0.14 1 1 0 0
.......................TCGATGTATGGCATCTCTTGAA.............................................................................................................................................................................................................. 22 3 15 0.13 2 2 0 0
................................................................................................................................................................CTGTAAGTATAATACCTCTAATA.................................................................... 23 1 8 0.13 1 1 0 0
..............................................TTCGGGATTTTGTTGTTGCGCA....................................................................................................................................................................................... 22 1 8 0.13 1 1 0 0
.........................................................................................................................................................................TAATACCTCTAATAATTAAAC............................................................. 21 0 9 0.11 1 1 0 0
...............................................................................................................................................................ATCGTAAGTATAATACCTCTA....................................................................... 21 2 9 0.11 1 1 0 0
................................................................................................................................................................................................TGTAAAGTCCGAGCGCTACTTG..................................... 22 3 9 0.11 1 1 0 0
...............................................................................................................................................................................................TAGTAAAGTCCGAGCGCTACT....................................... 21 2 9 0.11 1 1 0 0
.......................................................................................................................................................................TATAATACCTCTAATAATTAA............................................................... 21 0 10 0.10 1 1 0 0
...............................................................................................................................................................................................TAGTAAAGTCCGAGCGCTAC........................................ 20 2 10 0.10 1 1 0 0
......................ACCGATGTATGGCATCCTTTG................................................................................................................................................................................................................ 21 1 11 0.09 1 1 0 0
....................ACTCCGATGTATGGCATCTTT.................................................................................................................................................................................................................. 21 1 11 0.09 1 1 0 0
...........................TGTATGGCATCTCTTGAAGCT........................................................................................................................................................................................................... 21 2 11 0.09 1 1 0 0
.......................................................................................................................................................................................TTTAAACATAGTAAAGTCCGAG.............................................. 22 3 11 0.09 1 1 0 0
........................TTGTGTATGGCATCTTTTGTAGCTC.......................................................................................................................................................................................................... 25 3 11 0.09 1 1 0 0
.......................TCGATGTATGGCATCTTTTGTA.............................................................................................................................................................................................................. 22 1 11 0.09 1 1 0 0
....................ACAGCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 22 1 11 0.09 1 1 0 0
...........................TGTTTGGCATCTTTTGTAGCTC.......................................................................................................................................................................................................... 22 1 11 0.09 1 1 0 0
..................AAACACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 24 0 11 0.09 1 1 0 0
.................AATACACCGATGTATGGCATCTTT.................................................................................................................................................................................................................. 24 2 11 0.09 1 1 0 0
.......................CCGCTGTATGGCATCTTTTGT............................................................................................................................................................................................................... 21 1 11 0.09 1 1 0 0
..................CTACACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 24 2 11 0.09 1 1 0 0
......................ACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 20 0 11 0.09 1 1 0 0
..................AATCACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 24 1 11 0.09 1 1 0 0
...................ATCACCGATGTATGGCATCTTTT................................................................................................................................................................................................................. 23 1 11 0.09 1 1 0 0
.......................TCTATGTATGGCATCTTTTGTAGC............................................................................................................................................................................................................ 24 2 11 0.09 1 1 0 0
........................CGCTGTATGGCATCTTTTGTA.............................................................................................................................................................................................................. 21 1 11 0.09 1 1 0 0
.................TAAACATCGATGTATGGCATC..................................................................................................................................................................................................................... 21 1 11 0.09 1 1 0 0
.........................GATGTATGGCATCTTTTGTA.............................................................................................................................................................................................................. 20 0 11 0.09 1 1 0 0
........................CGATGTATGGCATCTTTTGT............................................................................................................................................................................................................... 20 0 11 0.09 1 1 0 0
......................ATTGATGTATGGCATCATTTGTAG............................................................................................................................................................................................................. 24 3 11 0.09 1 1 0 0
......................ACCGATGTATGCCATCTTTTG................................................................................................................................................................................................................ 21 1 11 0.09 1 1 0 0
.......................TTGATGTATGGCATCTTTTGTA.............................................................................................................................................................................................................. 22 2 11 0.09 1 1 0 0
.........................GATGTATGGCAACTTTTGTAG............................................................................................................................................................................................................. 21 1 11 0.09 1 1 0 0
..........................ATCTATGGCATCTCTTGAAGC............................................................................................................................................................................................................ 21 3 11 0.09 1 1 0 0
................TTAAACACCGATGTATGGCATC..................................................................................................................................................................................................................... 22 0 11 0.09 1 1 0 0
....................ACACCGATGTATGGCATCTTTC................................................................................................................................................................................................................. 22 1 11 0.09 1 1 0 0
.....................TATCGATGTATGGCATCTCTTG................................................................................................................................................................................................................ 22 3 11 0.09 1 1 0 0
.......................ACGATGTATGGCATCTTTTGTA.............................................................................................................................................................................................................. 22 1 11 0.09 1 1 0 0
.................TAAACATCGATGTATGACATC..................................................................................................................................................................................................................... 21 2 11 0.09 1 1 0 0
.......................ACGATGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 23 1 11 0.09 1 1 0 0
....................TTACCGATGTATGGCATCTTTTGT............................................................................................................................................................................................................... 24 2 11 0.09 1 1 0 0
.......................TTGATGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 23 2 11 0.09 1 1 0 0
...............CTTAAACATCGATGTATGGCAT...................................................................................................................................................................................................................... 22 1 11 0.09 1 1 0 0
....................ACACCGATTTATGGCATCTTTT................................................................................................................................................................................................................. 22 1 11 0.09 1 1 0 0
.......................ATGATGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 23 2 11 0.09 1 1 0 0
...........................TGTATGGCATCTCTTGAAGC............................................................................................................................................................................................................ 20 2 11 0.09 1 1 0 0
...................ATCATCGATGTATGGCATCTCTTG................................................................................................................................................................................................................ 24 3 11 0.09 1 1 0 0
..................AAACATCGATGTATGGCATC..................................................................................................................................................................................................................... 20 1 11 0.09 1 1 0 0
.......GTAAAAAACTTAAACACCGAT............................................................................................................................................................................................................................... 21 0 12 0.08 1 1 0 0
........................................................................................................................................................................................................CCGCTCGCTACTAGGAGTA................................ 19 3 12 0.08 1 0 0 1
.TGTTAGGTAAAAAACTTAAACA.................................................................................................................................................................................................................................... 22 1 12 0.08 1 1 0 0
....TAGGTAAAAAACTTAAACATC.................................................................................................................................................................................................................................. 21 1 12 0.08 1 1 0 0
..............................................TTCCGGATTTTGTTGTTGCGCA....................................................................................................................................................................................... 22 2 12 0.08 1 1 0 0
...............................................TCCGGATTTTGTTGTTGCGCA....................................................................................................................................................................................... 21 1 12 0.08 1 1 0 0
...........TAAACTTAAACATCGATGTATG.......................................................................................................................................................................................................................... 22 2 12 0.08 1 1 0 0
......................ATCGATTTATGGCATCTCTTG................................................................................................................................................................................................................ 21 3 12 0.08 1 1 0 0
..........................TTGTATGGCATCTCTTGAAGCTC.......................................................................................................................................................................................................... 23 3 12 0.08 1 1 0 0
.............................................TTTCCGGATTTTGTTGTTGCGCA....................................................................................................................................................................................... 23 3 12 0.08 1 1 0 0
..........AAAAACTTAAACACCGATGTAT........................................................................................................................................................................................................................... 22 0 12 0.08 1 1 0 0
........TAAAAAACTTAAACACCGATGT............................................................................................................................................................................................................................. 22 0 12 0.08 1 1 0 0
......................................TTTTGTAGCTCGGGATTTTG................................................................................................................................................................................................. 20 0 13 0.08 1 1 0 0
............................GTATGGCATCTTTTCTAGCTC.......................................................................................................................................................................................................... 21 1 14 0.07 1 0 1 0
.....................AACCGATGTATGGCATCTTTTG................................................................................................................................................................................................................ 22 1 14 0.07 1 1 0 0
.....................AATCGATGTATGGCATCTCTTG................................................................................................................................................................................................................ 22 3 14 0.07 1 1 0 0
.....................ATCCGATGTATGGCATCTTTTGT............................................................................................................................................................................................................... 23 2 14 0.07 1 0 1 0
......................ATTGAGGTATGGCATCTTTTGTAG............................................................................................................................................................................................................. 24 3 14 0.07 1 1 0 0
..............................................................................................................................................................................................AGAGTAAAGTCCGAGCGCTA......................................... 20 3 14 0.07 1 1 0 0
....................AAACCGATGTATGGCATCTTT.................................................................................................................................................................................................................. 21 1 14 0.07 1 0 1 0
.............................TATGGCATCTCTTGAAGCTC.......................................................................................................................................................................................................... 20 2 14 0.07 1 1 0 0
...........................TGTATGGCATCTCTTGAAGCTCT......................................................................................................................................................................................................... 23 3 15 0.07 1 1 0 0
.......................TCGATGTATGGCATCTCTTGAAG............................................................................................................................................................................................................. 23 3 15 0.07 1 1 0 0
...................................................................................................................................................................................................AAAGTCCGAGCGCTACTTGT.................................... 20 3 15 0.07 1 1 0 0
........................CGATGTATGGCATCTTTCGTA.............................................................................................................................................................................................................. 21 1 15 0.07 1 1 0 0
....................ACACCGATGTATGGCATCTCT.................................................................................................................................................................................................................. 21 1 15 0.07 1 1 0 0
.........................GATGTATGGCATCTCTTGAA.............................................................................................................................................................................................................. 20 2 15 0.07 1 1 0 0
............................GTATGGCATCTCTTGAAGCT........................................................................................................................................................................................................... 20 2 16 0.06 1 0 0 1
....................................................................................................................TTTTTTAGCTATGGCGTTTTTC................................................................................................................. 22 1 16 0.06 1 1 0 0
....................................................................................................................TTTATTAGCTATGGCGTTTTTC................................................................................................................. 22 2 16 0.06 1 1 0 0
...............................................................................................................................................................AACGTAAGTATAATACCTCTA....................................................................... 21 3 18 0.06 1 1 0 0
...........................AGTATGGCATCTCTTGAAGC............................................................................................................................................................................................................ 20 3 19 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_15:194614-194864 + dse_856 ATCAATCCATTTTTTGAATTTGTGGCTACATACCGTAGAAAACATCGAGCCCTAAAACAACAACGCGTAATCGTATCAAAAGCAGCGGTTTCGTGGAAGGCTTTATCAAAATCTCAAAAAAATCGCTACCGCAAAAAGGTACGCATTCATTT-TTTAATTGAACATTCATATTATGGAGATTATTAATTTGTATCATTTCAGGCGAGCGA------------TGAACGCCATCGGCGTCGTAGAAAT-GCTGATAAGA--AAGCCAG
droSim2 x:9647096-9647332 + ATCAATCCATTTTTTGAATATGTGGCTGAATACCGTAGAGAACATCCAGACCTAAGACTACAACGAGTTATCTTATCAAGAGCTTCGGGTGAATGGAAGACTTTATCCGAATCGCAGAAATATCGCTACCGCAAACAAGTACGCATTCATTT-TTTAATTGAAAATTCATATTATGGAGATTATTAATTTGTATCATTTCAGGCGAGCGA------------TGAACGAAATCGGCGTCGGAGAGTT-GCT----------------
dm3 chr2L:14879124-14879370 - CAACGCCTATT--TGAATTTTGTGCGTTCCTTCCGAAAGAAGCACTGTAACTTGAAACCGCGGGAATTAATT---GCAAAGGCCGCTAAAGCGTGGGCCAGGCTCTCGGAGAATAGAAAGGATCGATACCGCCGGATGGTACGTA-------TATTTTTTA--------TGTTATGAAGACTATTCATTGGTGTCCTTTCAGGCATGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCCAGCAATACTGAGATAG
droEre2 scaffold_4929:6625012-6625229 - TT-----------TGAATTTTGTGCGATCCTTCCGCAAAAAGCACTGTGACCTCAAGCCCCAGGAATTGATT---ACGGAGGCCGCGAAAGCCTGGGCCAAGCTACCCGAGGAAAAAAAGGATCGCTATCGGCGCATGGTACGCTGTTTTTATTTTATTTA---------TTTATGGTGATTTTGAATGTGTATTCTTTCAGGCATGCAAGGTCACCACTAGTGATCGCCACAAGCGCCGT--------------------------
droYak3 2L:14984471-14984690 - TT-----------TGAATTTTGTGCGAGCATTCCGCAAGAAGCACTGTGACCTCAAGCCCCAAGAATTGATC---GCGCAGGCCGCTAAAGCCTGGTCCAAGCTACCCGAGGAAAAAAAGGATCGATACCGCCGCATGGTATGAA-------TTTTATTTAAACATTCCTACTATGGTGATAATAAACTTGTATCTTTTTAGGCTTGCAAGGTCACCACTAGCGAGCGCCACAAGCGCCGT--------------------------
droBia1 scf7180000302098:202189-202231 + ATCAACCCATTG-------ATGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACATGGGCGCCAACACATCGAGC----------------
droTak1 scf7180000414538:8991-9046 + CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTAAAAAGATCATTAATTAGTAGAATTTCATGAGGCAGA------------TGCACATTAGTGG--------------------------------
droRho1 scf7180000767418:7352-7416 + AG-----------CGACGGTTGGTTGGGAAGACTTTAAAA---------------------------------------------------------------------ATCCTCATAGAAATAGAGGCTGCAAAAATGTATGTA--------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302235:286501-286510 + AT--GTCTATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
ATCAATCCATTTTTTGAATTTGTGGCTACATACCGTAGAAAACATCGAGCCCTAAAACAACAACGCGTAATCGTATCAAAAGCAGCGGTTTCGTGGAAGGCTTTATCAAAATCTCAAAAAAATCGCTACCGCAAAAAGGTACGCATTCATTT-TTTAATTGAACATTCATATTATGGAGATTATTAATTTGTATCATTTCAGGCGAGCGA------------TGAACGCCATCGGCGTCGTAGAAAT-GCTGATAAGA--AAGCCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................ATGGAGATTATTAATTTGTAT.........................................................................21632.331940182012
...........................................................................................................................................................................TTATGGAGATTATTAATTTGT...........................................................................2177.435205200
.........................................................................................................................................................................TATTATGGAGATTATTAATTT.............................................................................21102.302302102
............................CATACCGTAGAAAACATCGAG..........................................................................................................................................................................................................................21142.002802701
.........................................................................................................................................................................................AATTTGTATCATTTCAGGCTC.............................................................21111.451611401
.......................................................................................................................................................................CATATTATGGAGATTATTAAT...............................................................................2191.331201101
..............................TACCGTAGAAAACATCGAGCC........................................................................................................................................................................................................................21131.311701700
............................................TCGAGCCCTAAAACAACAACG..........................................................................................................................................................................................................21111.001101001
..............................................................................................................................................................................TGGAGATTATTAATTTGTATC........................................................................2161.0060501
.................................CGTAGAAAACATCGAGCCCTA.....................................................................................................................................................................................................................21130.851101100
..................................GTAGAAAACATCGAGCCCTAA....................................................................................................................................................................................................................21130.851101100
...........................................ATCGAGCCCTAAAACAACAACG..........................................................................................................................................................................................................22110.7380800
.......................................AAACATCGAGCCCTAAAACAA...............................................................................................................................................................................................................21120.6780800
.....................................GAAAACATCGAGCCCTAAAAC.................................................................................................................................................................................................................21130.6280800
.....................................GAAAACATCGAGCCCTAAAA..................................................................................................................................................................................................................20130.6280800
........................................................................................................................................................................................TAATTTGTATCATTTCAGGCT..............................................................21100.5051400
............................................................................................................................................................................TATGGAGATTATTAATTTGT...........................................................................2070.4330300
.............................ATACCGTAGAAAACATCGAGC.........................................................................................................................................................................................................................21120.4250500
.......................................AAACATCGAGCCCTAAAACA................................................................................................................................................................................................................20130.3850500
............................................................................................................................................................................TATGGAGATTATTAATTTGTAT.........................................................................2260.3320200
.............................................................................................................................................................................ATGGAGATTATTAATTTGTATT........................................................................2260.3320200
...............................ACCGTAGAAAACATCGAGCCC.......................................................................................................................................................................................................................21130.3141300
......................................AAAACATCGAGCCCTAAAACA................................................................................................................................................................................................................21130.3140400
........................................................................................................................................................................................TAATTTGTATCATTTCAGGCTT.............................................................22100.3030300
........................................................................................................................................................................ATATTATGGAGATTATTAAT...............................................................................20100.3030300
....................................AGAAAACATCGAGCCCTAAAA..................................................................................................................................................................................................................21130.2330300
...................................TAGAAAACATCGAGCCCTAAA...................................................................................................................................................................................................................21130.2330300
..........................................................................................................................................................................ATTATGGAGATTATTAATTTG............................................................................2190.2220101
.......................................................................................................................................................................................TTAATTTGTATCATTTCAGGC...............................................................21100.2020200
.............................................CGAGCCCTAAAACAACAACGC.........................................................................................................................................................................................................21110.1820200
..............................................................................................................................................................................TGGAGATTATTAATTTGTAT.........................................................................2060.1710100
..............................TACCGTAGAAAACATCGAGCCC.......................................................................................................................................................................................................................22130.1520200
.....................................GAAAACATCGAGCCCTAAAACA................................................................................................................................................................................................................22130.1520200
..............................TACCGTAGAAAACATCGAGCCT.......................................................................................................................................................................................................................22130.1520200
...................................TAGAAAACATCGAGCCCTAA....................................................................................................................................................................................................................20130.1520200
.............................................................................................................................................................................ATGGAGATTATTAATTTGT...........................................................................1970.1410100
.........................................................................................................................................................................TATTATGGAGATTATTAATTTGT...........................................................................2370.1410100
.........................................ACATCGAGCCCTAAAACAACAACGCGT.......................................................................................................................................................................................................2780.1310100
......................................................................................................................................................................TCATATTATGGAGATTATTAA................................................................................2190.1110100
.........................................................................................................................................................................TATTATGGAGATTATTAATTTG............................................................................2290.1110100
........................................................................................................................................................................ATATTATGGAGATTATTAATT..............................................................................21100.1010100
.........................................................................................................................................................................TATTATGGAGATTATTAATT..............................................................................20100.1010100
.............................................CGAGCCCTAAAACAACAACG..........................................................................................................................................................................................................20110.0910100
.......................................AAACATCGAGCCCTAAAACAAC..............................................................................................................................................................................................................22120.0810100
............................CATACCGTAGAAAACATCGAGCCT.......................................................................................................................................................................................................................24120.0810100
.........................................................................................................................................................................................AATTTGTATCATTTCAGGCTCC............................................................22120.0810100
...............................ACCGTAGAAAACATCGAGCCCTA.....................................................................................................................................................................................................................23130.0811000
.................................CGTAGAAAACATCGAGCCCTATT...................................................................................................................................................................................................................23130.0810100
......................................AAAACATCGAGCCCTAAAAC.................................................................................................................................................................................................................20130.0810001
................................CCGTAGAAAACATCGAGCCCTT.....................................................................................................................................................................................................................22130.0810100
..............................TACCGTAGAAAACATCGAGCCTA......................................................................................................................................................................................................................23130.0810100
..................................GTAGAAAACATCGAGCCCTA.....................................................................................................................................................................................................................20130.0810100
droSim2
ATCAATCCATTTTTTGAATATGTGGCTGAATACCGTAGAGAACATCCAGACCTAAGACTACAACGAGTTATCTTATCAAGAGCTTCGGGTGAATGGAAGACTTTATCCGAATCGCAGAAATATCGCTACCGCAAACAAGTACGCATTCATTT-TTTAATTGAAAATTCATATTATGGAGATTATTAATTTGTATCATTTCAGGCGAGCGA------------TGAACGAAATCGGCGTCGGAGAGTT-GCT----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGTT-T..................20296.001920000000000000192000
.................................CGTAGAGAACATCCAGACCTA.....................................................................................................................................................................................................................21488.2535301003303000000019000
..................................GTAGAGAACATCCAGACCTAA....................................................................................................................................................................................................................21464.2525704002430000000010000
............................AATACCGTAGAGAACATCCAG..........................................................................................................................................................................................................................21452.5021000001830000000027000
..............................TACCGTAGAGAACATCCAGACC.......................................................................................................................................................................................................................22452.002080000207000000001000
.............................ATACCGTAGAGAACATCCAGA.........................................................................................................................................................................................................................21445.0018000001200000000168000
ATCAATCCATTTTTTGAATAT......................................................................................................................................................................................................................................................21341.331240000120000000004000
...................................TAGAGAACATCCAGACCTAA....................................................................................................................................................................................................................20436.251450000138000000007000
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGTT-TT.................21333.0099000000000000099000
...AATCCATTTTTTGAATATGTG...................................................................................................................................................................................................................................................21433.001320000132000000000000
..CAATCCATTTTTTGAATATGT....................................................................................................................................................................................................................................................21431.501260000117900000000000
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGTT-...................19228.0056010000000000055000
.............................ATACCGTAGAGAACATCCAG..........................................................................................................................................................................................................................20427.001080000420000000066000
....ATCCATTTTTTGAATATGTGGC.................................................................................................................................................................................................................................................22426.251050000102300000000000
....ATCCATTTTTTGAATATG.....................................................................................................................................................................................................................................................18420.2581000078300000000000
..............................TACCGTAGAGAACATCCAGAC........................................................................................................................................................................................................................21419.00760100360000000039000
.....................................................................................................................................................................................................................................AATCGGCGTCGGAGAGTT-T..................19219.0038000000000000038000
.............................ATACCGTAGAGAACATCCAGAA........................................................................................................................................................................................................................22418.5074000000000000074000
....ATCCATTTTTTGAATATGTG...................................................................................................................................................................................................................................................20418.2573000069300000001000
..............................TACCGTAGAGAACATCCAG..........................................................................................................................................................................................................................19417.2569000069000000000000
.................................CGTAGAGAACATCCAGACC.......................................................................................................................................................................................................................19417.2569000069000000000000
..............................TACCGTAGAGAACATCCAGAA........................................................................................................................................................................................................................21416.0064000000000000064000
...AATCCATTTTTTGAATATG.....................................................................................................................................................................................................................................................19415.7563000063000000000000
......CCATTTTTTGAATATGTG...................................................................................................................................................................................................................................................18415.0060000054600000000000
...................................TAGAGAACATCCAGACCTA.....................................................................................................................................................................................................................19414.2557000057000000000000
.................................CGTAGAGAACATCCAGACCT......................................................................................................................................................................................................................20413.2553010048000000004000
.............................ATACCGTAGAGAACATCCAGAC........................................................................................................................................................................................................................22412.7551000042000000009000
..................................GTAGAGAACATCCAGACCTA.....................................................................................................................................................................................................................20412.7551010042000000008000
..............................TACCGTAGAGAACATCCAGA.........................................................................................................................................................................................................................20412.00480000120000000036000
..............................TACCGTAGAGAACATCCA...........................................................................................................................................................................................................................18411.2545000045000000000000
......................................................................................................................................................................................................................................ATCGGCGTCGGAGAGTT-TT.................19411.2545000000000000045000
............TTTGAATATGTGGCTGAATAC..........................................................................................................................................................................................................................................21210.5021000000000000021000
......CCATTTTTTGAATATGTGGC.................................................................................................................................................................................................................................................20410.5042000042000000000000
....ATCCATTTTTTGAATATGT....................................................................................................................................................................................................................................................1949.7539000039000000000000
................................................................................................................................................................................................................................AACGAAATCGGCGTCGGAGAG......................2129.5019000000000000019000
................................CCGTAGAGAACATCCAGACCT......................................................................................................................................................................................................................2149.0036080024300000001000
...AATCCATTTTTTGAATAT......................................................................................................................................................................................................................................................1848.2533000030300000000000
.........................CTGAATACCGTAGAGAACATC.............................................................................................................................................................................................................................2128.0016000020000000014000
..............TGAATATGTGGCTGAATACCG........................................................................................................................................................................................................................................2128.0016000016000000000000
................................................................................................................................................................................................................................AACGAAATCGGCGTCGGAGT.......................2028.0016000000000000016000
................................................................................................................................................................................................................................AACGAAATCGGCGTCGGAGA.......................2028.0016000000000000016000
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGTT-A..................2028.0016000000000000016000
..CAATCCATTTTTTGAATA.......................................................................................................................................................................................................................................................1847.5030000030000000000000
.....................................................................................................................................................................................................................................AATCGGCGTCGGAGAGTT-TT.................2037.3322000000000000022000
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGTT-TA.................2127.0014000000000000014000
.TCAATCCATTTTTTGAATATG.....................................................................................................................................................................................................................................................2146.7527000027000000000000
..................................GTAGAGAACATCCAGACC.......................................................................................................................................................................................................................1846.7527000027000000000000
............TTTGAATATGTGGCTGAATACCG........................................................................................................................................................................................................................................2326.0012000012000000000000
........ATTTTTTGAATATGTGGC.................................................................................................................................................................................................................................................1846.0024000024000000000000
..............................................................................................................................................................................................................................TGAACGAAATCGGCGTCGGAG........................2126.0012000000000000012000
........................................AACATCCAGACCTAAGACTAC..............................................................................................................................................................................................................2126.0012000012000000000000
.................................................................................................................................................................................................................................ACGAAATCGGCGTCGGAGAG......................2025.5011000000000000011000
...................................................................................................................................................................................................................................GAAATCGGCGTCGGAGAGTT-T..................2125.5011000000000000011000
........ATTTTTTGAATATGTGGCTTT..............................................................................................................................................................................................................................................2145.0020000000000000020000
...AATCCATTTTTTGAATATGT....................................................................................................................................................................................................................................................2044.5018000018000000000000
.........TTTTTTGAATATGTGGCTTT..............................................................................................................................................................................................................................................2064.5027000000000000027000
.....TCCATTTTTTGAATATGTG...................................................................................................................................................................................................................................................1944.5018000018000000000000
.......CATTTTTTGAATATGTGGC.................................................................................................................................................................................................................................................1944.5018000018000000000000
......CCATTTTTTGAATATGTGGCT................................................................................................................................................................................................................................................2144.2517020015000000000000
.................................................................................................................................................................................................................................ACGAAATCGGCGTCGGAGA.......................1924.00800000000000008000
.......CATTTTTTGAATATGTGGCT................................................................................................................................................................................................................................................2043.7515000012000000003000
...AATCCATTTTTTGAATATGTGGC.................................................................................................................................................................................................................................................2343.7515000015000000000000
.TCAATCCATTTTTTGAATA.......................................................................................................................................................................................................................................................1943.7515000015000000000000
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGT.....................1893.6733000032000000001000
................................................................................................................................................................................................................................AACGAAATCGGCGTCGGAG........................1923.50700000000000007000
................................................................................................................................................................................................................................AACGAAATCGGCGTCGGAGTT......................2123.50700000000000007000
......................................................................................................................................................................................................................................ATCGGCGTCGGAGAGTT-T..................1823.50700000000000007000
.........................CTGAATACCGTAGAGAACAT..............................................................................................................................................................................................................................2023.50700000000000007000
.............................ATACCGTAGAGAACATCCAGAT........................................................................................................................................................................................................................2243.2513000000000000013000
....................................AGAGAACATCCAGACCTAA....................................................................................................................................................................................................................1943.2513000012000000001000
.....TCCATTTTTTGAATATGT....................................................................................................................................................................................................................................................1843.0012000012000000000000
..CAATCCATTTTTTGAATATG.....................................................................................................................................................................................................................................................2043.0012000012000000000000
............................AATACCGTAGAGAACATCC............................................................................................................................................................................................................................1943.0012000012000000000000
.........................................ACATCCAGACCTAAGACTAC..............................................................................................................................................................................................................2023.00600006000000000000
....ATCCATTTTTTGAATATGTGG..................................................................................................................................................................................................................................................2142.751100000300000008000
............................................TCCAGACCTAAGACTACAACGAGTTA.....................................................................................................................................................................................................2622.50500000000000005000
..................................................................................................................................................................................................................................CGAAATCGGCGTCGGAGAGT.....................2022.50500002000000003000
..........TTTTTGAATATGTGGCTGAAT............................................................................................................................................................................................................................................2122.50500000000000005000
............................AATACCGTAGAGAACATCCA...........................................................................................................................................................................................................................2042.501000009000000001000
...............................................................................................................................................................................................................................GAACGAAATCGGCGTCGGAGA.......................2122.50500000000000005000
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGTT-AA.................2122.50500000000000005000
..........................TGAATACCGTAGAGAACATC.............................................................................................................................................................................................................................2022.50500000000000005000
.............................ATACCGTAGAGAACATCCAA..........................................................................................................................................................................................................................2042.5010000000000000010000
.............................................................................................................................................................................................................AGCGA------------TGAACGAAATCGGCGT.............................2122.50500000000000005000
........................GCTGAATACCGTAGAGAACAT..............................................................................................................................................................................................................................2122.50500000000000005000
.TCAATCCATTTTTTGAATAT......................................................................................................................................................................................................................................................2042.25900009000000000000
......CCATTTTTTGAATATGTGG..................................................................................................................................................................................................................................................1942.25900009000000000000
.................................CGTAGAGAACATCCAGACCTAA....................................................................................................................................................................................................................2242.25900009000000000000
.......CATTTTTTGAATATGTGG..................................................................................................................................................................................................................................................1842.25900009000000000000
.............................ATACCGTAGAGAACATCCA...........................................................................................................................................................................................................................1942.25900009000000000000
.........................CTGAATACCGTAGAGAACAA..............................................................................................................................................................................................................................2022.00400000000000004000
...............................................................................................................................................................................................................................GAACGAAATCGGCGTCGGAG........................2022.00400000000000004000
.............................................CCAGACCTAAGACTACAACGAGTTA.....................................................................................................................................................................................................2522.00400000000000004000
...............................................................................................................TCGCAGAAATATCGCTACCGCAAACA..................................................................................................................................2622.00400002000000002000
............................................TCCAGACCTAAGACTACAACGAGTTATC...................................................................................................................................................................................................2822.00401000000000003000
.....................................................................................................................................................................................................................................AATCGGCGTCGGAGAGTT-A..................1922.00400000000000004000
....................TGTGGCTGAATACCGTAGAGAACAT..............................................................................................................................................................................................................................2522.00400000000000004000
....................................................................................................................................................................................................................................AAATCGGCGTCGGAGAGTT-AT.................2122.00400000000000004000
.................................................................................................................................................................................................................................ACGAAATCGGCGTCGGAGAGT.....................2122.00400000000000004000
...................................................................................................................................................................................................................................GAAATCGGCGTCGGAGAGTT-...................2022.00400000000000004000
..........................TGAATACCGTAGAGAACATCC............................................................................................................................................................................................................................2122.00400000000000004000
...............GAATATGTGGCTGAATACCG........................................................................................................................................................................................................................................2022.00400004000000000000
.........TTTTTTGAATATGTGGCTT...............................................................................................................................................................................................................................................1942.00800000000000008000
................................................................................................................................................................................................................................AACGAAATCGGCGTCGGAGAA......................2122.00400000000000004000
................................CCGTAGAGAACATCCAGACCTA.....................................................................................................................................................................................................................2241.75700006000000001000
............................AATACCGTAGAGAACATCCAGA.........................................................................................................................................................................................................................2241.75700000000000007000
.............................ATACCGTAGAGAACATCCAGTA........................................................................................................................................................................................................................2241.75700000000000007000
................................................................................................................................................................................................................GA------------TGAACGAAATCGGCGTCGG..........................2121.50300000000000003000
.............................ATACCGTAGAGAACATCCAGT.........................................................................................................................................................................................................................2141.50600000000000006000
..................TATGTGGCTGAATACCGTAGAGAACA...............................................................................................................................................................................................................................2621.50300000000000003000
................................................................................................................................................................................................................................AACGAAATCGGCGTCGGAGAGT.....................2221.50300000000000003000
.................................................................................................................................................................................................................A------------TGAACGAAATCGGCGTCGGA.........................2121.50300000000000003000
............................AATACCGTAGAGAACATCCAGAC........................................................................................................................................................................................................................2341.50600006000000000000
.........TTTTTTGAATATGTGGCT................................................................................................................................................................................................................................................1841.50600006000000000000
.........TTTTTTGAATATGTGGCTGAA.............................................................................................................................................................................................................................................2121.50300000000000003000
..CAATCCATTTTTTGAATAT......................................................................................................................................................................................................................................................1941.50600006000000000000
..........................TGAATACCGTAGAGAACATCCA...........................................................................................................................................................................................................................2221.50300000000000003000
....................................AGAGAACATCCAGACCTA.....................................................................................................................................................................................................................1841.50600006000000000000
...AATCCATTTTTTGAATATGTGGCT................................................................................................................................................................................................................................................2441.50600006000000000000
................................CCGTAGAGAACATCCAGACC.......................................................................................................................................................................................................................2041.50600006000000000000
.....................................................................................................................................................................................................................................AATCGGCGTCGGAGAGTT-AT.................2021.50300000000000003000
...............................................................................................................................................................................................................................GAACGAAATCGGCGTCGGA.........................1921.50300000000000003000
.....................................GAGAACATCCAGACCTAAGACTACAA............................................................................................................................................................................................................2621.50300000000000003000
...................................................................................................................................................................................................................................GAAATCGGCGTCGGAGAGT.....................1921.50300000000000003000
.....................................GAGAACATCCAGACCTAA....................................................................................................................................................................................................................1841.50600006000000000000
..................................................................................................................................................................................................................................CGAAATCGGCGTCGGAGAGTT-T..................2221.50300000000000003000
......................................................................................................................................................................................................................................ATCGGCGTCGGAGAGTT-TA.................1931.33400000000000004000
......................................................................................................................................................................................................................................ATCGGCGTCGGAGAGTT-AA.................1931.33400000000000004000
................................CCGTAGAGAACATCCAGAC........................................................................................................................................................................................................................1941.25500003000000002000
..................................GTAGAGAACATCCAGACCT......................................................................................................................................................................................................................1941.25502003000000000000
..............................TACCGTAGAGAACATCCAGAT........................................................................................................................................................................................................................2141.25500000000000005000
............................AATACCGTAGAGAACATCCAGT.........................................................................................................................................................................................................................2241.25500000000000005000
.............................ATACCGTAGAGAACATCCAGAAT.......................................................................................................................................................................................................................2341.25500000000000005000
.......CATTTTTTGAATATGTGGCTTT..............................................................................................................................................................................................................................................2241.25500000000000005000
........ATTTTTTGAATATGTGGCTT...............................................................................................................................................................................................................................................2041.25500000000000005000
..........TTTTTGAATATGTGGCTTT..............................................................................................................................................................................................................................................19131.0814000000000000014000
........ATTTTTTGAATATGTGGCT................................................................................................................................................................................................................................................1941.00400003000000001000
......................TGGCTGAATACCGTAGAGAAC................................................................................................................................................................................................................................2121.00200002000000000000
......CCATTTTTTGAATATGTGGCTG...............................................................................................................................................................................................................................................2221.00200002000000000000
...............................................................................................................TCGCAGAAATATCGCTACCGCAAAC...................................................................................................................................2521.00200002000000000000
........ATTTTTTGAATATGTGGCTG...............................................................................................................................................................................................................................................2021.00200002000000000000
..........................................CATCCAGACCTAAGACTAC..............................................................................................................................................................................................................1921.00200002000000000000
......................................AGAACATCCAGACCTAAGACTACAACGA.........................................................................................................................................................................................................2821.00200000000000002000
............TTTGAATATGTGGCTGAATAA..........................................................................................................................................................................................................................................2121.00200000000000002000
..........................................................................................................................................................................................................GCGAGCGA------------TGAACGAAATCGGCG..............................2311.00100000000000001000
.................................................................................................................................................................................................................A------------TGAACGAAATCGGCGTCGGATT.......................2321.00200000000000002000
.......................................GAACATCCAGACCTAAGACTA...............................................................................................................................................................................................................2121.00200002000000000000
.................................................................................................................................................................................................................................ACGAAATCGGCGTCGGAGAGTT-...................2221.00200000000000002000
...........TTTTGAATATGTGGCTGAAT............................................................................................................................................................................................................................................2021.00200000000000002000
............................AATACCGTAGAGAACATCCAGAA........................................................................................................................................................................................................................2341.00400000000000004000
............................................................................................................................................................................................................GAGCGA------------TGAACGAAATCGGCGT.............................2211.00100000000000001000
ATCAATCCATTTTTTGAAT........................................................................................................................................................................................................................................................1931.00300003000000000000
ATCAATCCATTTTTTGAATA.......................................................................................................................................................................................................................................................2031.00300003000000000000
........ATTTTTTGAATATGTGGCTTTT.............................................................................................................................................................................................................................................22101.0010000000000000010000
.............................ATACCGTAGAGAACATCCAGAAA.......................................................................................................................................................................................................................2341.00400000000000004000
...............................ACCGTAGAGAACATCCAGACC.......................................................................................................................................................................................................................2141.00400003000000001000
................AATATGTGGCTGAATACCG........................................................................................................................................................................................................................................1921.00200002000000000000
................................CCGTAGAGAACATCCAGA.........................................................................................................................................................................................................................1841.00401003000000000000
.............................ATACCGTAGAGAACATCC............................................................................................................................................................................................................................1841.00400003000000001000
....................TGTGGCTGAATACCGTAGA....................................................................................................................................................................................................................................1921.00200002000000000000
........................GCTGAATACCGTAGAGAACATCCAGACC.......................................................................................................................................................................................................................2821.00200000000000002000
..............................................CAGACCTAAGACTACAAC...........................................................................................................................................................................................................1821.00200002000000000000
.......CATTTTTTGAATATGTGGCTGT..............................................................................................................................................................................................................................................2221.00200000000000002000
........ATTTTTTGAATATGTGGCTGA..............................................................................................................................................................................................................................................2121.00200000000000002000
ATCAATCCATTTTTTGAATATG.....................................................................................................................................................................................................................................................2231.00300003000000000000
.......CATTTTTTGAATATGTGGCTT...............................................................................................................................................................................................................................................2141.00400000000000004000
..............TGAATATGTGGCTGAATAC..........................................................................................................................................................................................................................................1921.00200002000000000000
............................................................................................................................................................................................................GAGCGA------------TGAACGAAATCGGCGTTT...........................2411.00100000000000001000
.........................CTGAATACCGTAGAGAACATCCAGACC.......................................................................................................................................................................................................................2721.00200000000000002000
......................................................................................................................................................................................................TCAGGCGAGCGA------------TGAACGAAATCGGC...............................2611.00100000000001000000
ATCAATCCATTTTTTGAA.........................................................................................................................................................................................................................................................1831.00300003000000000000
............................................................................................................................................................................................................GAGCGA------------TGAACGAAATCGGCT..............................2111.00100000000000001000
................................................................................................................................................................................................................GA------------TGAACGAAATCGGCGTCG...........................2021.00200000000000002000
...................................................................................................................................................................................................................................GAAATCGGCGTCGGAGAGA.....................1921.00200000000000002000
............................................TCCAGACCTAAGACTACAACGAGTT......................................................................................................................................................................................................2521.00200002000000000000
.................................................................................................................................................................................................................................ACGAAATCGGCGTCGGAGAGTT-T..................2321.00200000000000002000
........................GCTGAATACCGTAGAGAACA...............................................................................................................................................................................................................................2021.00200000000000002000
...................................TAGAGAACATCCAGACCT......................................................................................................................................................................................................................1841.00401003000000000000
......................................................................................................................................................................................................................................ATCGGCGTCGGAGAGTT-AT.................1931.00300000000000003000
.................................CGTAGAGAACATCCAGACCTT.....................................................................................................................................................................................................................2141.00400000000000004000
.............................ATACCGTAGAGAACATCCAGACCTAA....................................................................................................................................................................................................................2640.75300003000000000000
..............................TACCGTAGAGAACATCCAGAAA.......................................................................................................................................................................................................................2240.75300000000000003000
...............................ACCGTAGAGAACATCCAG..........................................................................................................................................................................................................................1840.75300003000000000000
.................................CGTAGAGAACATCCAGAC........................................................................................................................................................................................................................1840.75300003000000000000
............................AATACCGTAGAGAACATC.............................................................................................................................................................................................................................1840.75300003000000000000
..CAATCCATTTTTTGAATATGTG...................................................................................................................................................................................................................................................2240.75300003000000000000
.TCAATCCATTTTTTGAATATGT....................................................................................................................................................................................................................................................2240.75300003000000000000
.TCAATCCATTTTTTGAATATGTG...................................................................................................................................................................................................................................................2340.75300003000000000000
.....TCCATTTTTTGAATATGTGGC.................................................................................................................................................................................................................................................2140.75300003000000000000
..............................................................................................................................................................................................................................TGAACGAAATCGGCGTCGTTT........................2130.67200000000000002000
.................................CGTAGAGAACATCCAGACTA......................................................................................................................................................................................................................2050.60300000000000003000
.........................CTGAATACCGTAGAGAACATCC............................................................................................................................................................................................................................2220.50100000000000001000
.........TTTTTTGAATATGTGGCTGAAA............................................................................................................................................................................................................................................2220.50100000000000001000
...............................................................................................................................................................................................................................GAACGAAATCGGCGTCGGAT........................2020.50100000000000001000
.......CATTTTTTGAATATGTGGCTGAAT............................................................................................................................................................................................................................................2420.50100000000000001000
..................................GTAGAGAACATCCAGACCTTT....................................................................................................................................................................................................................2140.50200000000000002000
............................................TCCAGACCTAAGACTACAACGAGTTAT....................................................................................................................................................................................................2720.50100000000000001000
...................................................................................................................................................................................................................................GAAATCGGCGTCGGAGAG......................1820.50100000000000001000
..............................................................................................................................................................................................................................TGAACGAAATCGGCGTCGGA.........................2020.50100000000000001000
............TTTGAATATGTGGCTGAATG...........................................................................................................................................................................................................................................2020.50100000000000001000
..................................................................................................................................................................................................................................CGAAATCGGCGTCGGAGAG......................1920.50100000000000001000
dm3
CAACGCCTATT--TGAATTTTGTGCGTTCCTTCCGAAAGAAGCACTGTAACTTGAAACCGCGGGAATTAATT---GCAAAGGCCGCTAAAGCGTGGGCCAGGCTCTCGGAGAATAGAAAGGATCGATACCGCCGGATGGTACGTA-------TATTTTTTA--------TGTTATGAAGACTATTCATTGGTGTCCTTTCAGGCATGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCCAGCAATACTGAGATAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................AGCGCCGACGGATTTGCCA...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GGAGAATAGAAAGGATCGA.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CAAGCGCCGACGGATTTGCCAGCAA...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CATGCAAGGTCACCACCA..............................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GCCGCTAAAGCGTGGGCC........................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GAACGCCACAAGCGCCGACG........................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CCACCAGTGAACGCCACAAG................................2020.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ATGCAAGGTCACCACCAGT............................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................A--------TGTTATGAAGACTATTA.................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droEre2
TT-----------TGAATTTTGTGCGATCCTTCCGCAAAAAGCACTGTGACCTCAAGCCCCAGGAATTGATT---ACGGAGGCCGCGAAAGCCTGGGCCAAGCTACCCGAGGAAAAAAAGGATCGCTATCGGCGCATGGTACGCTGTTTTTATTTTATTTA---------TTTATGGTGATTTTGAATGTGTATTCTTTCAGGCATGCAAGGTCACCACTAGTGATCGCCACAAGCGCCGT--------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TT-----------TGAATTTTGTGCGAGCATTCCGCAAGAAGCACTGTGACCTCAAGCCCCAAGAATTGATC---GCGCAGGCCGCTAAAGCCTGGTCCAAGCTACCCGAGGAAAAAAAGGATCGATACCGCCGCATGGTATGAA-------TTTTATTTAAACATTCCTACTATGGTGATAATAAACTTGTATCTTTTTAGGCTTGCAAGGTCACCACTAGCGAGCGCCACAAGCGCCGT--------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droBia1
ATCAACCCATTG-------ATGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACATGGGCGCCAACACATCGAGC----------------SizeHit CountTotal NormTotal
No Reads
droTak1
CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTAAAAAGATCATTAATTAGTAGAATTTCATGAGGCAGA------------TGCACATTAGTGG--------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AG-----------CGACGGTTGGTTGGGAAGACTTTAAAA---------------------------------------------------------------------ATCCTCATAGAAATAGAGGCTGCAAAAATGTATGTA--------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AT--GTCTATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/17/2015 at 10:51 PM