ID:

dse_833

 Coordinate:

scaffold_13033:513-610 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.6 -7.5

Flybase annnotation

CDS [Dsec\GM22012-cds]; exon [dsec_GLEANR_476:1]; CDS [Dsec\GM22012-cds]; exon [dsec_GLEANR_476:2]; intron [Dsec\GM22012-in]

No Repeatable elements found

mature
  1. scaffold_9:1497095-1497117 -
  2. dse_833  scaffold_13033:568-590 -
star
  1. scaffold_9:1497068-1497089 -
  2. dse_833  scaffold_13033:541-562 -

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------##################################################
CGATCCCTCTAAAGTTAAGATTACTTCCGAAGACGACGTAGATAGCGATGGTAAGCCAGAGGAGAGCGATGTTAGACCTCTTGAGAATCCAGAGAATTCGGAGAATCCAGACACTGTCTTTCTCCAATAAAAATTGGTATCTACGAAGGTGACCAGGAGGAAAAGAAGCCCGTGGAAGAAGATAATATCGTGCCCGTG
**********************************************************************...((((.(((.((...(((.((....)))))...)).)))....)))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V113
male body		 M054
female body
 V115
head
...........................................AGCGATGGTAAGCCAGAGGAGAGC................................................................................................................................... 24 0 2 1.00 2 1 1 0 0
........CTAAAGTTAAGATTACTTCCGAAGA..................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0
......................................................................GTTAGACCTCTTGAGAATCCAGA......................................................................................................... 23 0 2 1.00 2 1 0 1 0
..........................................TAGCGATGGTAAGCCAGAGGAGAGCGAT................................................................................................................................ 28 0 2 1.00 2 0 2 0 0
......................................................................................ATCCAGAGAATTCGGAGAATCC.......................................................................................... 22 0 2 1.00 2 1 1 0 0
...........................................AGCGATGGTAAGCCAGAGGAGAGCGAT................................................................................................................................ 27 0 2 1.00 2 1 1 0 0
...............................................................................CTTGAGAATCCAGAGAATT.................................................................................................... 19 0 2 0.50 1 1 0 0 0
................................................................AGCGATGTTAGACCTCTTGAGA................................................................................................................ 22 0 2 0.50 1 1 0 0 0
...........................................AGCGATGGTAAGCCAGAG......................................................................................................................................... 18 0 2 0.50 1 1 0 0 0
.................................................................................................................................................................AAAGAAGCCCGTGGAAGAAGAT............... 22 0 2 0.50 1 0 1 0 0
.............................................................................................GAATTCGGAGAATCCAGACACTGTCTT.............................................................................. 27 0 2 0.50 1 0 1 0 0
....................................................AAGCCAGAGGAGAGCGATGTTAGACCT....................................................................................................................... 27 0 2 0.50 1 0 1 0 0
.......................CTTCCGAAGACGACGTAG............................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0
................AAGATTACTTCCGAAGACGACGTAGAT........................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
............................................................................................................................................CTACGAAGGTGACCAGGAGGA..................................... 21 0 2 0.50 1 1 0 0 0
...............................................................................CTTGAGAATCCAGAGAATTCGGAGA.............................................................................................. 25 0 2 0.50 1 1 0 0 0
...................................................................GATGTTAGACCTCTTGAGA................................................................................................................ 19 0 2 0.50 1 1 0 0 0
..............................................GATGGTAAGCCAGAGGAGAGCGAT................................................................................................................................ 24 0 2 0.50 1 1 0 0 0
...........................................................................................GAAAACTCTGAGAATCCAGACACTGT................................................................................. 26 3 2 0.50 1 0 0 1 0
..........................................................................GACCTCTTGAGAATCCAGAGAATTCGG................................................................................................. 27 0 2 0.50 1 0 0 1 0
.................................CGACGTAGATAGCGATGGT.................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0
....................................CGTAGATAGCGATGGTAAGCCAGAGG........................................................................................................................................ 26 0 2 0.50 1 1 0 0 0
..........................CCGAAGACGACGTAGATAGCGATGGTA................................................................................................................................................. 27 0 2 0.50 1 0 1 0 0
..............TTAAGATTACTTCCGAAGACGAC................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0
........................................................................TAGACCTCTTGAGAATCCAGAGA....................................................................................................... 23 0 2 0.50 1 1 0 0 0
...................................................................GATGTTAGACCTCTTGAG................................................................................................................. 18 0 2 0.50 1 1 0 0 0
....................................................AAGCCAGAGGAGAGCGATGTT............................................................................................................................. 21 0 2 0.50 1 0 1 0 0
....................................................................................................................................ATTGGTATCTACGAAGGTG............................................... 19 0 2 0.50 1 1 0 0 0
..........................................TAGCGATGGTAAGCCAGAGGAGGGCG.................................................................................................................................. 26 1 2 0.50 1 0 1 0 0
..........................................TAGCGATGGTAAGCCAGAGGAGAGC................................................................................................................................... 25 0 2 0.50 1 0 1 0 0
..............................................GATGGTAAGCCAGAGGAGAG.................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
...........................................AGCGATGGTAAGCCAGAGGAGA..................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
.........................................................................................................................................TATCTACGAAGGTGACCAGGA........................................ 21 0 2 0.50 1 1 0 0 0
..........................................................................................................................................ATCTACGAAGGTGACCAGGA........................................ 20 0 2 0.50 1 0 0 1 0
..........................................TAGCGATGGTAAGCCAGA.......................................................................................................................................... 18 0 2 0.50 1 1 0 0 0
....................................................AAGCCAGAGGAGAGCGATGT.............................................................................................................................. 20 0 2 0.50 1 1 0 0 0
..........................................TAGCGATGGTAAGCCAGAG......................................................................................................................................... 19 0 2 0.50 1 1 0 0 0
.................................................................................................................................AAAATTGGTATCTACGAAGGTGACCA........................................... 26 0 2 0.50 1 1 0 0 0
.................................................................................................................................................................AAAGAAGCCCGTGGAAGAA.................. 19 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................................GTGGAAGAAGATAATATCGTGC..... 22 0 2 0.50 1 0 1 0 0
..........................................TAGCGATGGTAAGCCAGAGGA....................................................................................................................................... 21 0 2 0.50 1 1 0 0 0
........................................GATAGCGATGGTAAGCCAGAGGA....................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
..........................................................................................................................................ATCTACGAAGGTGACCAGGAGGAAA................................... 25 0 2 0.50 1 0 1 0 0
.............................................................................................................................................................AGGAAAAGAAGCCCGTGGAAG.................... 21 0 2 0.50 1 0 1 0 0
.............................................................................................................................................................AGGAAAAGAAGCCCGTGGAAGAA.................. 23 0 2 0.50 1 1 0 0 0
...............................GACGACGTAGATAGCGATGGTAAGCC............................................................................................................................................. 26 0 2 0.50 1 1 0 0 0
..................................................................................................CGGAGAATCCAGACACTGTCTT.............................................................................. 22 0 2 0.50 1 1 0 0 0
..........................................................................................AGAGAATTCGGAGAATCC.......................................................................................... 18 0 2 0.50 1 0 0 1 0
........................................................................................................................................GTATCTACGAAGGTGACCAGGAGGA..................................... 25 0 2 0.50 1 0 1 0 0
........................................................................................................................................GTATCTACGAAGGTGACCAGGA........................................ 22 0 2 0.50 1 1 0 0 0
........................................................................................................................................GTATCTACGAAGGTGACC............................................ 18 0 2 0.50 1 1 0 0 0
.............................................CGATGGTAAGCCAGAGGAGAGCGAT................................................................................................................................ 25 0 2 0.50 1 1 0 0 0
..........................................................................................................................................ATCTACGAAGGTGACCAGGAGGA..................................... 23 0 2 0.50 1 1 0 0 0
................AAGATTACTTCCGAAGAC.................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0
...................ATTACTTCCGAAGACGACGT............................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0
.............................................................GAGAGCGATGTTAGACCTCT..................................................................................................................... 20 0 2 0.50 1 1 0 0 0
.................................................................................................................................................................AAAGAAGCCCGTGGAAGAAG................. 20 0 2 0.50 1 1 0 0 0
............................................................................................................................................CTACGAAGGTGACCAGGAGG...................................... 20 0 2 0.50 1 1 0 0 0
...............................................................................CTTGAGAATCCAGAGAATTCGGA................................................................................................ 23 0 2 0.50 1 1 0 0 0
......................................................................GTTAGAACTCTTGAGAATCCAGAGA....................................................................................................... 25 1 2 0.50 1 0 0 1 0
.....................TACTTCCGAAGACGACGTAGATAGCGA...................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
...........................CGAAGACGACGTAGATAGC........................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0
........................................................................TAGACCTCTTGAGAATCCAGA......................................................................................................... 21 0 2 0.50 1 1 0 0 0
...............................................................GAGCGATGTTAGACCTCTTGAGA................................................................................................................ 23 0 2 0.50 1 0 0 1 0
.......................................AGATAGCGATGGTAAGCCAGAG......................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
..........................................................................................................................................ATCTACGAAGGTGACCAGGAGGAAAA.................................. 26 0 2 0.50 1 1 0 0 0
...........................CGAAGACGACGTATAGGGC........................................................................................................................................................ 19 3 9 0.33 3 0 1 2 0
............................GATGATGAAGTAGATAGCGATG.................................................................................................................................................... 22 3 4 0.25 1 0 1 0 0
................................ACGACGAAGATCTCGATGGTA................................................................................................................................................. 21 3 5 0.20 1 0 1 0 0
..............................................................................................................................................................................GAAGAAGATAATATTGGG...... 18 2 6 0.17 1 0 0 1 0
..............................AGACGACGGAGAAAGCGA...................................................................................................................................................... 18 2 9 0.11 1 0 0 1 0
.............................................................................................................................................................AGGAAAAGAAGACAGTAGAAG.................... 21 3 14 0.07 1 0 1 0 0
.............................AAGACGACGTATATGGCC....................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

GCTAGGGAGATTTCAATTCTAATGAAGGCTTCTGCTGCATCTATCGCTACCATTCGGTCTCCTCTCGCTACAATCTGGAGAACTCTTAGGTCTCTTAAGCCTCTTAGGTCTGTGACAGAAAGAGGTTATTTTTAACCATAGATGCTTCCACTGGTCCTCCTTTTCTTCGGGCACCTTCTTCTATTATAGCACGGGCAC
******************************************************************************...((((.(((.((...(((.((....)))))...)).)))....)))).********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 M054
female body
...TGGGAGAATTCAATTCTA................................................................................................................................................................................. 18 2 2 0.50 1 1 0
........................CAGTCTTATGCTGCATCTA........................................................................................................................................................... 19 3 12 0.08 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_13033:463-660 - dse_833 CGA------------TCCC---------TCTAAAGTTAAGATTACTTCCGAAGACGACGTAGATAGCGATGGTAAG------------------------CCAGAGGAGAGCGA---------TGTTAGACCTCTTGAGAATCCAGAGAATTCGGAGAATCCAGACA-CTGTCTTTC-TCCA---A---TAAAAATTGGTATCTACGAAGGTG------------------ACCAGGAGGAAAAGAAGCCCGTGGAAGAAGATAATATCGTGCCCGTG---------------------------------
droSim2 2r:18724380-18724466 - TCA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGCGAGGCCAAGGACGG-----------------------GGCTGGTCAGCAGCCCCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGTTCTGCCAATGGGGGTG---------------------------
dm3 chr2R:18186762-18186847 - TCA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGGCCAAGGACGG-----------------------GGCTGGTCAGCAGCCCCTG-CTAA---A---TG---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGT----------------------------
droEre2 scaffold_4845:12327101-12327187 - TGA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGCGACGCCAAGGACGG-----------------------CGCTGGTCAGCAGCCCCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGTG---------------------------
droYak3 2R:17937588-17937674 - TGA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCCAAGGACGG-----------------------GGCTGGTCAGCAGCCCCTG-CTCA---A---TG---------------------------------------------------------------------GCAACGGGTCGGCCAATGGAGGTG---------------------------
droEug1 scf7180000409672:6089165-6089251 - TTA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGACCAAGGACGG-----------------------AGCTGGCCAGCAGCCCCTG-CTCA---A---TG---------------------------------------------------------------------GCAATGGCTCTGCCAATGGAGGTG---------------------------
droBia1 scf7180000302143:2524751-2524922 + GGA------------CGATCTG---------------------------------------------GATGGCAAG------------------------CAGGAGGAGAGCGA---------TGTCAAGCCTGTGGAGAACCCCG------------------AAA---CCATCTTCTCCA---A---CG-ACATCGGCATCTTCGAGGGCG------------------GCCAGGAGGAAAAGAAGCCCGTGCAGGAAGAGGTGATTGTGCCCGTGGTGCTGACCAAACTGGAGA---CCGACGTTGAG
droTak1 scf7180000415739:40064-40153 - TAA------------AGAA---------GCCG------------------TA-----------------T------------------CCC---G------------------AGAACGGAGATACCAAGGATGC-----------------------AGCTAACCAGCAGCCGCTG-CTCA---A---TG---------------------------------------------------------------------GCAACGGATCGGCGAATGGAGCTG---------------------------
droEle1 scf7180000491282:91033-91228 + TGA------------CGACATA---------------------------------------------GATGGCAAGCAGGGG------------------GAGGAGGAGAACGA---------CAGCAGGCCGGTGGAGAGTCCCG------------------ACACCGACGTCTT---CA---G---G-AACATGGGCATCTTCGAGGGCAGCAAGGACAACAAGGGCAGCGAGGAGGAGAAGAAACCGGTGGAGGAGGAGGTGATTGTGCCCGTGGTGCTGACCAATCTGGGCA---CTGGTGTTAAG
droRho1 scf7180000778226:43154-43328 + GGA------------CGAACTC---------------------------------------------GATGGCAAG------------------------CAGGAGGAGCACGA---------CAGCAAGCCCGTGGAGAGTCCGG------------------ACGGCAACGTCTTCACCA---A---C-GACATGGGCATCTTCGAGGGCA------------------ACAAGGACGGGGACAAGCCCGTGGAGGAAGAGGTGATTGTGCCCGTGGTGCTGACCAAGCTGGAGA---CAGGTCTCAAG
droFic1 scf7180000454066:2087859-2087945 - TAA------------AGAA---------GCCT------------------TA--------------------------------------T---G------------------AAAACGGAGATTCAAAGGATCC-----------------------GGCTAACCAGCAGCCGCTT-CTCA---A---TG---------------------------------------------------------------------GCAATGGCTCGGCAAACGGAGCTG---------------------------
droKik1 scf7180000302471:1305507-1305705 + AGA------------GGACCTGGAAGAGG------------------------------------------ACAAGGAGGCGGAGAGTCCCACG------CCCCAGGAGAACGA---------TGGCAAACCACTGGAGAACCCCG------------------GCAACGGCATCTT-CACA--AG---C-CACATGGGCATCTTCGAGGGCC------------------AGGAGAAGGAGGACAAACCCGTCGAGGAAGAGCCCATTGTGCCGATTGTTCAGACCAAGCTGGATGTCACCGATGTCAAG
droAna3 scaffold_13266:2201628-2201714 - TGA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGATGCCAAGGACGG-----------------------AGCTGGTCAGCAGCCACTG-CTGA---A---CG---------------------------------------------------------------------GCAATGGATCGGCCAACGGTGGCG---------------------------
droBip1 scf7180000396384:378846-379041 + GGA------------CAATGAG-------GCC-----GACAATGAATCCCAGGAGGA------------------------GGAAAAGGCAGACGAA---CCC------GAAGA---------TAGCAAGCCGGTGGCTCAACCGG------------------ATG---ACGACTT---CA---A---G-GGCATGGGAATCTGGGAGAATG------------------GCCAAGAGGAGCCAAAGCCCGTTGAGGAGGAGGTGATTGTGCCGGTGGTGCACACGAAACTGGACACCAGCGATGTCAAA
dp5 3:14948264-14948456 + GGA------------CGAC---------GACC------------------AGGAAGA------------------------GGGACATCCCGATGACAACGATAACGATATCGA---------CAACCAACCCATAGAGACGCCCGTAA---------------CTCCGGACATCTT---CAAGAACTCG-GGTATCGGCATTTTCGAGGGTT------------------CGGAGGGCGAACAGGAGCCCGTGCAGGAGGGAGTGATTGTGCCGGTGGTACAGACCAAACTGGATA---CGG------AA
droPer2 scaffold_4:4102811-4102894 - TCA------------AAAA---------GCCG------------------TA--------------------------------------C---G------------------ACAACGGCGACGCCAAGGACGG-----------------------AGCCAATCAACAGCCGCTT-CTTA---A---CG---------------------------------------------------------------------GCAACGGCTCGGCCAACGGAG------------------------------
droWil2 scf2_1100000004510:219472-219649 + CGA------------CAACAAC-------GAC--------------------------------------GA------------------C---------GACGACAAATACGA---------TCGGACACCCATTGAGGCACCAT------------------CGCCAAGTGAATT---CGATGAGAAG-AGCATTGGCATCTATGCGGGTT--------CAGACGGGC-ATCAGGATCAGGCCAAGCCGGTCAACGAAGATGTCATTGTTCCAGTGGTTGAAACCAAATTGGACA---CAAGT------
droVir3 scaffold_10324:683070-683159 - TGAACGGCAACGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------GGCTGGGCAGCAGCCGCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGCCAACGGCGATG---------------------------
droMoj3 scaffold_6496:2522459-2522548 - TGAATGGATCGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAAGACGG-----------------------TGCTGGACAGCAGCCGCTG-CTCA---A---TG---------------------------------------------------------------------GCAATGGAACAGCCAATGGAGATG---------------------------
droGri2 scaffold_15245:8397461-8397550 - TCAATGGCGCCGGGAAGAA---------GCCC------------------TA--------------------------------------C---G------------------A---------TAGCAAGGACAA-----------------------CGCTGGGCAACAGCCACTA-CTTA---A---TG---------------------------------------------------------------------GCAACGGTGCAGCCAATGGCGATG---------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CGA------------TCCC---------TCTAAAGTTAAGATTACTTCCGAAGACGACGTAGATAGCGATGGTAAG------------------------CCAGAGGAGAGCGA---------TGTTAGACCTCTTGAGAATCCAGAGAATTCGGAGAATCCAGACA-CTGTCTTTC-TCCA---A---TAAAAATTGGTATCTACGAAGGTG------------------ACCAGGAGGAAAAGAAGCCCGTGGAAGAAGATAATATCGTGCCCGTG---------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................AGCGATGGTAAG------------------------CCAGAGGAGAGC.......................................................................................................................................................................................................2421.0020110
.............................CTAAAGTTAAGATTACTTCCGAAGA.................................................................................................................................................................................................................................................................2521.0020020
............................................................................................................................GTTAGACCTCTTGAGAATCCAGA....................................................................................................................................................................2321.0021010
...............................................................TAGCGATGGTAAG------------------------CCAGAGGAGAGCGA---------T...........................................................................................................................................................................................2821.0020200
............................................................................................................................................ATCCAGAGAATTCGGAGAATCC.....................................................................................................................................................2221.0020110
................................................................AGCGATGGTAAG------------------------CCAGAGGAGAGCGA---------T...........................................................................................................................................................................................2721.0020110
.....................................................................................................................................CTTGAGAATCCAGAGAATT...............................................................................................................................................................1920.5010010
.............................................................................................................AGCGA---------TGTTAGACCTCTTGAGA...........................................................................................................................................................................2220.5010010
................................................................AGCGATGGTAAG------------------------CCAGAG.............................................................................................................................................................................................................1820.5010010
.................................................................................................................................................................................................................................................AAAGAAGCCCGTGGAAGAAGAT................................................2220.5010100
...................................................................................................................................................GAATTCGGAGAATCCAGACA-CTGTCTT........................................................................................................................................2720.5010100
.........................................................................AAG------------------------CCAGAGGAGAGCGA---------TGTTAGACCT..................................................................................................................................................................................2720.5010100
............................................CTTCCGAAGACGACGTAG.........................................................................................................................................................................................................................................................1820.5010010
.....................................AAGATTACTTCCGAAGACGACGTAGAT.......................................................................................................................................................................................................................................................2720.5010010
..........................................................................................................................................................................................................CTACGAAGGTG------------------ACCAGGAGGA......................................................................2120.5010010
.....................................................................................................................................CTTGAGAATCCAGAGAATTCGGAGA.........................................................................................................................................................2520.5010010
................................................................................................................GA---------TGTTAGACCTCTTGAGA...........................................................................................................................................................................1920.5010010
...................................................................GATGGTAAG------------------------CCAGAGGAGAGCGA---------T...........................................................................................................................................................................................2420.5010010
................................................................................................................................GACCTCTTGAGAATCCAGAGAATTCGG............................................................................................................................................................2720.5011000
......................................................CGACGTAGATAGCGATGGT..............................................................................................................................................................................................................................................1920.5010010
.........................................................CGTAGATAGCGATGGTAAG------------------------CCAGAGG............................................................................................................................................................................................................2620.5010010
...............................................CCGAAGACGACGTAGATAGCGATGGTA.............................................................................................................................................................................................................................................2720.5010100
...................................TTAAGATTACTTCCGAAGACGAC.............................................................................................................................................................................................................................................................2320.5010010
..............................................................................................................................TAGACCTCTTGAGAATCCAGAGA..................................................................................................................................................................2320.5010010
................................................................................................................GA---------TGTTAGACCTCTTGAG............................................................................................................................................................................1820.5010010
.........................................................................AAG------------------------CCAGAGGAGAGCGA---------TGTT........................................................................................................................................................................................2120.5010100
..................................................................................................................................................................................................ATTGGTATCTACGAAGGTG------------------................................................................................1920.5010010
...............................................................TAGCGATGGTAAG------------------------CCAGAGGAGAGC.......................................................................................................................................................................................................2520.5010100
...................................................................GATGGTAAG------------------------CCAGAGGAGAG........................................................................................................................................................................................................2020.5010010
................................................................AGCGATGGTAAG------------------------CCAGAGGAGA.........................................................................................................................................................................................................2220.5010010
.......................................................................................................................................................................................................TATCTACGAAGGTG------------------ACCAGGA.........................................................................2120.5010010
........................................................................................................................................................................................................ATCTACGAAGGTG------------------ACCAGGA.........................................................................2020.5011000
...............................................................TAGCGATGGTAAG------------------------CCAGA..............................................................................................................................................................................................................1820.5010010
.........................................................................AAG------------------------CCAGAGGAGAGCGA---------TGT.........................................................................................................................................................................................2020.5010010
...............................................................TAGCGATGGTAAG------------------------CCAGAG.............................................................................................................................................................................................................1920.5010010
...............................................................................................................................................................................................AAAATTGGTATCTACGAAGGTG------------------ACCA............................................................................2620.5010010
.................................................................................................................................................................................................................................................AAAGAAGCCCGTGGAAGAA...................................................1920.5010010
...........................................................................................................................................................................................................................................................GTGGAAGAAGATAATATCGTGC......................................2220.5010100
...............................................................TAGCGATGGTAAG------------------------CCAGAGGA...........................................................................................................................................................................................................2120.5010010
.............................................................GATAGCGATGGTAAG------------------------CCAGAGGA...........................................................................................................................................................................................................2320.5010010
........................................................................................................................................................................................................ATCTACGAAGGTG------------------ACCAGGAGGAAA....................................................................2520.5010100
.............................................................................................................................................................................................................................................AGGAAAAGAAGCCCGTGGAAG.....................................................2120.5010100
.............................................................................................................................................................................................................................................AGGAAAAGAAGCCCGTGGAAGAA...................................................2320.5010010
....................................................GACGACGTAGATAGCGATGGTAAG------------------------CC.................................................................................................................................................................................................................2620.5010010
........................................................................................................................................................CGGAGAATCCAGACA-CTGTCTT........................................................................................................................................2220.5010010
................................................................................................................................................AGAGAATTCGGAGAATCC.....................................................................................................................................................1820.5011000
......................................................................................................................................................................................................GTATCTACGAAGGTG------------------ACCAGGAGGA......................................................................2520.5010100
......................................................................................................................................................................................................GTATCTACGAAGGTG------------------ACCAGGA.........................................................................2220.5010010
......................................................................................................................................................................................................GTATCTACGAAGGTG------------------ACC.............................................................................1820.5010010
..................................................................CGATGGTAAG------------------------CCAGAGGAGAGCGA---------T...........................................................................................................................................................................................2520.5010010
........................................................................................................................................................................................................ATCTACGAAGGTG------------------ACCAGGAGGA......................................................................2320.5010010
.....................................AAGATTACTTCCGAAGAC................................................................................................................................................................................................................................................................1820.5010010
........................................ATTACTTCCGAAGACGACGT...........................................................................................................................................................................................................................................................2020.5010100
..........................................................................................................GAGAGCGA---------TGTTAGACCTCT................................................................................................................................................................................2020.5010010
.................................................................................................................................................................................................................................................AAAGAAGCCCGTGGAAGAAG..................................................2020.5010010
..........................................................................................................................................................................................................CTACGAAGGTG------------------ACCAGGAGG.......................................................................2020.5010010
.....................................................................................................................................CTTGAGAATCCAGAGAATTCGGA...........................................................................................................................................................2320.5010010
..........................................TACTTCCGAAGACGACGTAGATAGCGA..................................................................................................................................................................................................................................................2720.5010010
................................................CGAAGACGACGTAGATAGC....................................................................................................................................................................................................................................................1920.5010010
..............................................................................................................................TAGACCTCTTGAGAATCCAGA....................................................................................................................................................................2120.5010010
............................................................................................................GAGCGA---------TGTTAGACCTCTTGAGA...........................................................................................................................................................................2320.5011000
............................................................AGATAGCGATGGTAAG------------------------CCAGAG.............................................................................................................................................................................................................2220.5010010
........................................................................................................................................................................................................ATCTACGAAGGTG------------------ACCAGGAGGAAAA...................................................................2620.5010010
droSim2
TCA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGCGAGGCCAAGGACGG-----------------------GGCTGGTCAGCAGCCCCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGTTCTGCCAATGGGGGTG---------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................GA---A---TG---------------------------------------------------------------------GCAACGGTTCTGCCAATGGGGGT............................2812.00200020000000000000
..............................................................................................................................CAAGGACGG-----------------------GGCTGGTCAGC..............................................................................................................................................2011.00100010000000000000
..................................................TA--------------------------------------C---G------------------AGAACGGCGAGGCC........................................................................................................................................................................................1811.00100000000000100000
..A------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGCGAGGCCAA......................................................................................................................................................................................2911.00100010000000000000
...........................................................................................................................GGCCAAGGACGG-----------------------GGCTGGTCAGCAGC...........................................................................................................................................2611.00101000000000000000
............................GCCC------------------TA--------------------------------------C---G------------------AGAACGGCGAGGC.........................................................................................................................................................................................2111.00100010000000000000
...................................................................................................................AACGGCGAGGCCAAGGACGG-----------------------.........................................................................................................................................................2011.00100010000000000000
...........................................................................................................................GGCCAAGGACGG-----------------------GGCTGGTCAGC..............................................................................................................................................2311.00101000000000000000
............................GCCC------------------TA--------------------------------------C---G------------------AGAACGGCGAGGCCAAGGACG.................................................................................................................................................................................2911.00101000000000000000
.........................................................................................................................................................................AGCCCCTG-CTGA---A---TG---------------------------------------------------------------------GCAACG.............................................2111.00100010000000000000
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAACGGTTCTGCCAATGGGG..............................2211.00100010000000000000
..................................................................................................................GAACGGCGAGGCCAAGGAC..................................................................................................................................................................................1911.00100100000000000000
..............................................................................................G------------------AGAACGGCGAGGCCAAGGACGG-----------------------GGC......................................................................................................................................................2611.00100000010000000000
dm3
TCA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGGCCAAGGACGG-----------------------GGCTGGTCAGCAGCCCCTG-CTAA---A---TG---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGT----------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................C------------------TA--------------------------------------C---G------------------AGAACGGAGAGGCC........................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................A---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGGC.........................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAACGGTTCGGCCAATGGAG..............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................A---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAG...........................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................................................AGCCCCTG-CTAA---A---TG---------------------------------------------------------------------GCAAC..............................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................A---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGA............................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGT----------------------------2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................GGCCAAGGACGG-----------------------GGCTGGTC.................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................C------------------TA--------------------------------------C---G------------------AGAACGGAGAGGCCAAGGACGG-----------------------.........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CCTG-CTAA---A---TG---------------------------------------------------------------------GCAACGGTTC.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TG-CTAA---A---TG---------------------------------------------------------------------GCAACGGTTC.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGGCCAAGGA...................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AACGGTTCGGCCAATGGAGGT----------------------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAG.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAACGGTTCGGCCAATGGAGGG----------------------------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AACGGTTCGGCCAATGGAGG.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................GAACGGAGAGGCCAAGGAC..................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AGAACGGAGAGGCCAAGGACGG-----------------------.........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GAACGGAGAGGCCAAGGA...................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GCAACGGTTCGGCCAATGGG...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................C---G------------------AGAACGGAGAGGCCAAGGACGG-----------------------G........................................................................................................................................................2511.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GGAGAGGCCAAGGACGG-----------------------GGCTG....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGAGGCCAAGGACGG-----------------------GGCT.....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AACGGAGAGGCCAAGGACG.................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................G------------------AGAACGGAGAGGCCAAGG....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................CGGAGAGGCCAAGGACGG-----------------------.........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GAACGGAGAGGCCAAGGACGG-----------------------.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................C------------------TA--------------------------------------C---G------------------AGAACGGAGAGG..........................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGA............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAACGGTTCGGCCAATGG................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................C---G------------------AGAACGGAGAGGCCAAGGA...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................GGAGAGGCCAAGGACGG-----------------------GGCT.....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GAACGGAGAGGCCAAGGACG.................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AGCAGCCCCTG-CTAA---A---TG---------------------------------------------------------------------GCAA...............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................G------------------AGAACGGAGAGGCCAAGGACGG-----------------------.........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..A------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGA............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................CGGAGAGGCCAAGGACGG-----------------------GGC......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GAGGCCAAGGACGG-----------------------GGCT.....................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................G------------------AGAACGGAGAGGCCAAGGA...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................AGAACGGAGAGGCCAAGGAC..................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................AACGGAGAGGCCAAGGACGG-----------------------GGC......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.CA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGA..............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................CC------------------TA--------------------------------------C---G------------------AGAACGGAGAGGC.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGGCC........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CAAGGACGG-----------------------GGCTGGTCAGCA.............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAACGGTTCGGCCAATGGA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AAGGACGG-----------------------GGCTGGTCAGCAG............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................ACGGAGAGGCCAAGGACGG-----------------------.........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGG..........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................C------------------TA--------------------------------------C---G------------------AGAACGGAGAGGCCAAGG....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................CGGTTCGGCCAATGGAG..............................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGCGACGCCAAGGACGG-----------------------CGCTGGTCAGCAGCCCCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGTG---------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................AACGGTTCGGCCAATGGAGGT............................2117.0070000700
...........................................................................................................................CGCCAAGGACGG-----------------------CGCTGGTCAGC..............................................................................................................................................2315.0050200030
....................................................................................................................................................................................................................................................................GCAACGGTTCGGCCAATGGAGGT............................2314.0040000220
.....................................................................................................................................................................................................................................................................CAACGGTTCGGCCAATGGAGG.............................2112.0022000000
...................................................................................................................AACGGCGACGCCAAGGACGG-----------------------CGCT.....................................................................................................................................................2412.0020000200
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGT............................2412.0020000200
....................................................................................................................ACGGCGACGCCAAGGACGG-----------------------C........................................................................................................................................................2012.0020000110
........................................................................................................................CGACGCCAAGGACGG-----------------------CGCTGGTCAGC..............................................................................................................................................2612.0022000000
..............................................................................................................................CAAGGACGG-----------------------CGCTGGTCAGC..............................................................................................................................................2012.0020001100
.........................................................................................................................................................................AGCCCCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGTT..........................................2412.0022000000
..................................................................................................................GAACGGCGACGCCAAGGAC..................................................................................................................................................................................1911.0011000000
.GA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGC..............................................................................................................................................................................................2211.0010000010
...............................................................................................................................AAGGACGG-----------------------CGCTGGTCAGC..............................................................................................................................................1911.0010001000
.................................................................................................................AGAACGGCGACGCCAAGGACGG-----------------------.........................................................................................................................................................2211.0011000000
...............................C------------------TA--------------------------------------C---G------------------AGAACGGCGACGCCAAG.....................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................................CAACGGTTCGGCCAATGGAGGTG---------------------------2311.0011000000
...........................................................................................................................CGCCAAGGACGG-----------------------CGCTGGTC.................................................................................................................................................2011.0011000000
...............................................................................................................................AAGGACGG-----------------------CGCTGGTCAGCAGCCCC........................................................................................................................................2511.0010100000
...........................................................................................................................CGCCAAGGACGG-----------------------CGCTGGTCA................................................................................................................................................2111.0011000000
...................................................A--------------------------------------C---G------------------AGAACGGCGACGCCAAGGACGG-----------------------C........................................................................................................................................................2611.0010000001
.........................................................................................................................GACGCCAAGGACGG-----------------------CGCTGGTCAGC..............................................................................................................................................2511.0011000000
......................................................................................................................................................................................................................................................................AACGGTTCGGCCAATGGAG..............................1911.0010000100
......................................................................................................................................................................................................................................................................AACGGTTCGGCCAATGGAGG.............................2011.0011000000
............................................................................................................................GCCAAGGACGG-----------------------CGCTGGTCAGC..............................................................................................................................................2211.0011000000
...............AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGG...............................................................................................................................................................................................1911.0010000010
.........................................................................................................................................................................................A---TG---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGG.............................2511.0010000100
.........................................................................................................................................................................................A---TG---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGTG---------------------------2711.0011000000
....................................................................................................................................................................................GA---A---TG---------------------------------------------------------------------GCAACGGTTCGGC......................................1811.0011000000
..........................................................................................................................ACGCCAAGGACGG-----------------------CGCTGGTCAGC..............................................................................................................................................2411.0010000010
.........................................................................................................................................................................AGCCCCTG-CTGA---A---TG---------------------------------------------------------------------GCAAC..............................................2011.0010000010
....................................................................................................................................................................................GA---A---TG---------------------------------------------------------------------GCAACGGTTCGGCCAATGGAGGT............................2811.0010000100
.GA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGG...............................................................................................................................................................................................2111.0011000000
..............................................................................................G------------------AGAACGGCGACGCCAAGGACGG-----------------------.........................................................................................................................................................2311.0010000010
.......................................................................................................................................................................................................................................................................ACGGTTCGGCCAATGGAGG.............................1911.0010001000
.................................................................................................................AGAACGGCGACGCCAAGGACG.................................................................................................................................................................................2111.0011000000
droYak3
TGA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCCAAGGACGG-----------------------GGCTGGTCAGCAGCCCCTG-CTCA---A---TG---------------------------------------------------------------------GCAACGGGTCGGCCAATGGAGGTG---------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................GCAACGGGTCGGCCAATGGAGGT............................2314.00400100030000
.........................................................................................................................................................................................A---TG---------------------------------------------------------------------GCAACGGGTCGGCCAATGGAGGT............................2613.00301000020000
......................................................................................................................................................................................................................................................................AACGGGTCGGCCAATGGAGGT............................2113.00300000030000
.....................................................................................................................................................................................................................................................................CAACGGGTCGGCCAATGGAGGT............................2212.00201000010000
................................................................................................................................................................................G-CTCA---A---TG---------------------------------------------------------------------GCAACGGGTCGGC......................................2112.00200000020000
.GA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCC........................................................................................................................................................................................2811.00100000010000
..................A---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCC........................................................................................................................................................................................2311.00100100000000
..........................................................................................................................ACGCCAAGGACGG-----------------------GGCTGGTCAGCA.............................................................................................................................................2511.00100000010000
...................................................................................................................................................................GTCAGCAGCCCCTG-CTCA---A---TG---------------------------------------------------------------------GC.................................................2311.00101000000000
..A------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGA............................................................................................................................................................................................2311.00100000010000
....................................................................................................................ACGGTGACGCCAAGGACGG-----------------------G........................................................................................................................................................2011.00100000010000
.GA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGT..............................................................................................................................................................................................2211.00101000000000
......................................................................................................................................................................................................................................................................AACGGGTCGGCCAATGGAGG.............................2011.00101000000000
...................................................................................................................AACGGTGACGCCAAGGACGG-----------------------.........................................................................................................................................................2011.00101000000000
..................................................................................................................GAACGGTGACGCCAAGGACGG-----------------------GG.......................................................................................................................................................2311.00100000010000
......................................................................................................................................................................................................................................................................AACGGGTCGGCCAATGGAG..............................1911.00100000010000
.................AA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGC.........................................................................................................................................................................................2311.00101000000000
................GAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCCAA......................................................................................................................................................................................2711.00101000000000
..................................................................................................................GAACGGTGACGCCAAGGACGG-----------------------GGC......................................................................................................................................................2411.00100000010000
.......................................................................................................................GTGACGCCAAGGACGG-----------------------GGCTG....................................................................................................................................................2111.00100000010000
................................................................................................................................................................................G-CTCA---A---TG---------------------------------------------------------------------GCAACGGGTCGGCC.....................................2211.00101000000000
.............................................................................................................................................................................................TG---------------------------------------------------------------------GCAACGGGTCGGCCAATGGAGGT............................2511.00100000010000
...............................C------------------TA--------------------------------------C---G------------------AGAACGGTGACGCCAAGGACGG-----------------------.........................................................................................................................................................2711.00100000010000
.GA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGC.........................................................................................................................................................................................2711.00100000100000
...............................................................................................................................................................GCTGGTCAGCAGCCCCTG-CTCA---A---TG---------------------------------------------------------------------G..................................................2611.00101000000000
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAACGGGTCGGCCAATGGAGGTG---------------------------2511.00100100000000
..............................................................................................................................................................................CTG-CTCA---A---TG---------------------------------------------------------------------GCAACGGGTCGG.......................................2211.00101000000000
...................................................A--------------------------------------C---G------------------AGAACGGTGACGCCAAG.....................................................................................................................................................................................2011.00100000010000
..........................................................................................................................................................................GCCCCTG-CTCA---A---TG---------------------------------------------------------------------GCAACGG............................................2111.00101000000000
......................................................................................................................GGTGACGCCAAGGACGG-----------------------G........................................................................................................................................................1811.00101000000000
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAACGGGTCGGCCAATGGAG..............................2211.00100000010000
.........................................................................................................................GACGCCAAGGACGG-----------------------GGCTGGT..................................................................................................................................................2111.00101000000000
.......................................................................................................................GTGACGCCAAGGACGG-----------------------GG.......................................................................................................................................................1811.00100001000000
...................................................................................................................................................................GTCAGCAGCCCCTG-CTCA---A---T.........................................................................................................................2011.00101000000000
..............................CC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCCAAG.....................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................TCAGCAGCCCCTG-CTCA---A---TG---------------------------------------------------------------------G..................................................2111.00101000000000
..................................................TA--------------------------------------C---G------------------AGAACGGTGACGCCAAGGACGG-----------------------G........................................................................................................................................................2711.00100000010000
............................GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCC........................................................................................................................................................................................2211.00101000000000
.....................................................................................................................................................................................................................................................................CAACGGGTCGGCCAATGGAGG.............................2111.00100000010000
...............................C------------------TA--------------------------------------C---G------------------AGAACGGTGACGCC........................................................................................................................................................................................1911.00100000010000
..................................................................................................................GAACGGTGACGCCAAGGACGG-----------------------G........................................................................................................................................................2211.00100000010000
..........................................................................................C---G------------------AGAACGGTGACGCCAAGGAC..................................................................................................................................................................................2211.00110000000000
..........................................................................................C---G------------------AGAACGGTGACGCCAAGGACGG-----------------------G........................................................................................................................................................2511.00100000010000
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAACGGGTCGGCCAATGGAGGT............................2411.00100000010000
...............................C------------------TA--------------------------------------C---G------------------AGAACGGTGACGCCAAGGA...................................................................................................................................................................................2411.00100000010000
..................A---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGTGACGCCAAG.....................................................................................................................................................................................2611.00101000000000
.........................................................................................................................GACGCCAAGGACGG-----------------------GGCT.....................................................................................................................................................1811.00101000000000
.........................................................................................................................................................................................................................................................................GGGTCGGCCAATGGAGGT............................1811.00100100000000
....................................................................................................................ACGGTGACGCCAAGGACGG-----------------------GGCTGGTC.................................................................................................................................................2711.00100100000000
droEug1
TTA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAGACCAAGGACGG-----------------------AGCTGGCCAGCAGCCCCTG-CTCA---A---TG---------------------------------------------------------------------GCAATGGCTCTGCCAATGGAGGTG---------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGA------------CGATCTG---------------------------------------------GATGGCAAG------------------------CAGGAGGAGAGCGA---------TGTCAAGCCTGTGGAGAACCCCG------------------AAA---CCATCTTCTCCA---A---CG-ACATCGGCATCTTCGAGGGCG------------------GCCAGGAGGAAAAGAAGCCCGTGCAGGAAGAGGTGATTGTGCCCGTGGTGCTGACCAAACTGGAGA---CCGACGTTGAGSizeHit CountTotal NormTotal
No Reads
droTak1
TAA------------AGAA---------GCCG------------------TA-----------------T------------------CCC---G------------------AGAACGGAGATACCAAGGATGC-----------------------AGCTAACCAGCAGCCGCTG-CTCA---A---TG---------------------------------------------------------------------GCAACGGATCGGCGAATGGAGCTG---------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGA------------CGACATA---------------------------------------------GATGGCAAGCAGGGG------------------GAGGAGGAGAACGA---------CAGCAGGCCGGTGGAGAGTCCCG------------------ACACCGACGTCTT---CA---G---G-AACATGGGCATCTTCGAGGGCAGCAAGGACAACAAGGGCAGCGAGGAGGAGAAGAAACCGGTGGAGGAGGAGGTGATTGTGCCCGTGGTGCTGACCAATCTGGGCA---CTGGTGTTAAGSizeHit CountTotal NormTotal
No Reads
droRho1
GGA------------CGAACTC---------------------------------------------GATGGCAAG------------------------CAGGAGGAGCACGA---------CAGCAAGCCCGTGGAGAGTCCGG------------------ACGGCAACGTCTTCACCA---A---C-GACATGGGCATCTTCGAGGGCA------------------ACAAGGACGGGGACAAGCCCGTGGAGGAAGAGGTGATTGTGCCCGTGGTGCTGACCAAGCTGGAGA---CAGGTCTCAAGSizeHit CountTotal NormTotal
No Reads
droFic1
TAA------------AGAA---------GCCT------------------TA--------------------------------------T---G------------------AAAACGGAGATTCAAAGGATCC-----------------------GGCTAACCAGCAGCCGCTT-CTCA---A---TG---------------------------------------------------------------------GCAATGGCTCGGCAAACGGAGCTG---------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGA------------GGACCTGGAAGAGG------------------------------------------ACAAGGAGGCGGAGAGTCCCACG------CCCCAGGAGAACGA---------TGGCAAACCACTGGAGAACCCCG------------------GCAACGGCATCTT-CACA--AG---C-CACATGGGCATCTTCGAGGGCC------------------AGGAGAAGGAGGACAAACCCGTCGAGGAAGAGCCCATTGTGCCGATTGTTCAGACCAAGCTGGATGTCACCGATGTCAAGSizeHit CountTotal NormTotal
No Reads
droAna3
TGA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGATGCCAAGGACGG-----------------------AGCTGGTCAGCAGCCACTG-CTGA---A---CG---------------------------------------------------------------------GCAATGGATCGGCCAACGGTGGCG---------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAATGGATCGGCCAACGGTGG.............................2319.009310050
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAATGGATCGGCCAACGGTGGC............................2418.008101042
............................................................................................................................GCCAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2216.006120030
.........................................................................................................................GATGCCAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2516.006200031
..............................................................................................................................CAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2014.004210010
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAATGGATCGGCCAACGGTG..............................2214.004111010
.........................................................................................................................GATGCCAAGGACGG-----------------------AGCTGGTC.................................................................................................................................................2214.004020020
........................................................................................................................AGATGCCAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2613.003010011
......................................................................................................................................................................................................................................................................AATGGATCGGCCAACGGTGGC............................2113.003020001
.......................................................................................................................GAGATGCCAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2713.003100020
...........................................................................................................................TGCCAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2312.002100010
............................................................................................................................GCCAAGGACGG-----------------------AGCTGGTC.................................................................................................................................................1912.002100001
..........................................................................................................................ATGCCAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2412.002000020
.GA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAG.............................................................................................................................................................................................2311.001000010
.................................................................................................................................GGACGG-----------------------AGCTGGTCAGCA.............................................................................................................................................1811.001100000
.....................................................................................................................CGGAGATGCCAAGGACGG-----------------------AGCTGGTC.................................................................................................................................................2611.001010000
..................................................................................................................................GACGG-----------------------AGCTGGTCAGCAGCC..........................................................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................ATGGATCGGCCAACGGTGGC............................2011.001010000
..................A---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGA............................................................................................................................................................................................1911.001010000
.....................................................................................................................................GG-----------------------AGCTGGTCAGCAGCCACTG-C....................................................................................................................................2211.001010000
.........................................................................................................................GATGCCAAGGACGG-----------------------AGCTGGT..................................................................................................................................................2111.001010000
...............................................................................................................................AAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................1911.001010000
......................................................................................................................GGAGATGCCAAGGACGG-----------------------AGCTGGTCAGC..............................................................................................................................................2811.001010000
.............................................................................................................................................................................................CG---------------------------------------------------------------------GCAATGGATCGGCCAACGGT...............................2211.001001000
..................................................................................................................GAACGGAGATGCCAAGGACG.................................................................................................................................................................................2011.001000001
.GA------------AGAA---------GCCC------------------TA--------------------------------------C---G------------------AGAACGGAGAT...........................................................................................................................................................................................2511.001010000
.............................................................................................................................CCAAGGACGG-----------------------AGCTGGTCA................................................................................................................................................1911.001000010
..................................................................................................................................GACGG-----------------------AGCTGGTCAGCAGCCACTG-CTGA---A---C.........................................................................................................................3011.001000010
.......................................................................................................................................................................GCAGCCACTG-CTGA---A---CG---------------------------------------------------------------------GCAATGGATC.........................................2711.001010000
...........................................................................................................................TGCCAAGGACGG-----------------------AGCTGGTCAG...............................................................................................................................................2211.001100000
...................................................A--------------------------------------C---G------------------AGAACGGAGATGCCAAGG....................................................................................................................................................................................2111.001000010
...................................................................................................................AACGGAGATGCCAAGGACGG-----------------------AGCTGGT..................................................................................................................................................2711.001100000
.........................................................................................................................................................................AGCCACTG-CTGA---A---CG---------------------------------------------------------------------GCAATGGATCGGCC.....................................2911.001010000
......................................................................................................................................................................AGCAGCCACTG-CTGA---A---CG---------------------------------------------------------------------GC.................................................2011.001010000
......................................................................................................................................................................................................................................................................AATGGATCGGCCAACGGT...............................1811.001010000
.....................................................................................................................................................................CAGCAGCCACTG-CTGA---A---CG---------------------------------------------------------------------GCAATGGATC.........................................2911.001010000
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAATGGATCGGCCAACGGTGT.............................2311.001000010
.........................................................................................................................................................................................A---CG---------------------------------------------------------------------GCAATGGATCGGCCAACGGT...............................2311.001000010
.........................................................................................................................GATGCCAAGGACGG-----------------------AGCT.....................................................................................................................................................1811.001000001
...................................................A--------------------------------------C---G------------------AGAACGGAGATGCCA.......................................................................................................................................................................................1811.001000010
...................................................................................................................................................................................TGA---A---CG---------------------------------------------------------------------GCAATGGATCGGCCAACGGTG..............................2711.001100000
.....................................................................................................................CGGAGATGCCAAGGACGG-----------------------AGCTGGT..................................................................................................................................................2511.001000010
..................................................................................................................GAACGGAGATGCCAAGGACGG-----------------------AGCC.....................................................................................................................................................2511.001010000
........................................................................................................................AGATGCCAAGGACGG-----------------------AGCT.....................................................................................................................................................1911.001010000
....................................................................................................................................................................................GA---A---CG---------------------------------------------------------------------GCAATGGATCGGCCAACGGTGG.............................2711.001000010
.........................................................................................................................GATGCCAAGGACGG-----------------------AGCTGGTCA................................................................................................................................................2311.001000010
.......................................................................................................................GAGATGCCAAGGACGG-----------------------AGCT.....................................................................................................................................................2011.001000001
..................................................................................................................GAACGGAGATGCCAAGGAC..................................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................G---------------------------------------------------------------------GCAATGGATCGGCCAACGGT...............................2111.001000010
............................................................................................................................GCCAAGGACGG-----------------------AGCTGGT..................................................................................................................................................1811.001100000
..................................................................................................................GAACGGAGATGCCAAGGA...................................................................................................................................................................................1811.001010000
......................................................................................................................GGAGATGCCAAGGACGG-----------------------AGCTGGTC.................................................................................................................................................2511.001000010
..................................................................................................................................................................................CTGA---A---CG---------------------------------------------------------------------GCAATGGATCGGC......................................2011.001010000
....................................................................................................................................................................................GA---A---CG---------------------------------------------------------------------GCAATGGATCGGCCAACGGT...............................2511.001000010
droBip1
GGA------------CAATGAG-------GCC-----GACAATGAATCCCAGGAGGA------------------------GGAAAAGGCAGACGAA---CCC------GAAGA---------TAGCAAGCCGGTGGCTCAACCGG------------------ATG---ACGACTT---CA---A---G-GGCATGGGAATCTGGGAGAATG------------------GCCAAGAGGAGCCAAAGCCCGTTGAGGAGGAGGTGATTGTGCCGGTGGTGCACACGAAACTGGACACCAGCGATGTCAAASizeHit CountTotal NormTotal
No Reads
dp5
GGA------------CGAC---------GACC------------------AGGAAGA------------------------GGGACATCCCGATGACAACGATAACGATATCGA---------CAACCAACCCATAGAGACGCCCGTAA---------------CTCCGGACATCTT---CAAGAACTCG-GGTATCGGCATTTTCGAGGGTT------------------CGGAGGGCGAACAGGAGCCCGTGCAGGAGGGAGTGATTGTGCCGGTGGTACAGACCAAACTGGATA---CGG------AASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................CTT---CAAGAACTCG-GGTATCGGC...............................................................................................................2213.0030200100000
........................................................................................................................................................................GGACATCTT---CAAGAACTCG-GGTATCGGC...............................................................................................................2813.0030200000001
............................................................................................................................................................................ATCTT---CAAGAACTCG-GGTATCGGC...............................................................................................................2412.0020100100000
...............................................................................................................................................................................................................................................GAACAGGAGCCCGTGCAGGAGGGA................................................2412.0020100001000
..........................................................................................................................................GACGCCCGTAA---------------CTCCGGAC...........................................................................................................................................1912.0020200000000
.....................................................................................................................................................................................AAGAACTCG-GGTATCGGC...............................................................................................................1812.0020000000002
...........................................................................................................ATATCGA---------CAACCAACCCATAGAGAC..........................................................................................................................................................................2512.0020200000000
...................................................................................GACATCCCGATGACAACGATAACGAT..........................................................................................................................................................................................................2612.0020200000000
........................................................................................................................................................................................................ATTTTCGAGGGTT------------------CGGAGGGC........................................................................2112.0020200000000
....................................................................................................................................CATAGAGACGCCCGTAA---------------CTCCGGA............................................................................................................................................2411.0010100000000
.................................................................................................................A---------CAACCAACCCATAGAGAC..........................................................................................................................................................................1911.0010100000000
.............................................................................................................ATCGA---------CAACCAACCCATAGAGA...........................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................................GATTGTGCCGGTGGTACAGAC.........................2111.0010100000000
....................................................................................................................................................................................CAAGAACTCG-GGTATCGGC...............................................................................................................1911.0010100000000
.................................................................................GGGACATCCCGATGACAACGAT................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................GAGACGCCCGTAA---------------CTCCGGACATCTT---C..................................................................................................................................2711.0010100000000
.............................................................................................................................................................................................G-GGTATCGGCATTTTCGAGGGTT------------------C...............................................................................2411.0010100000000
............................................................................................................................................................................................................................................GGCGAACAGGAGCCCGTGCAGGA....................................................2311.0010010000000
...............................................................................................................CGA---------CAACCAACCCATAGAGACGCCC......................................................................................................................................................................2511.0010100000000
.................AC---------GACC------------------AGGAAGA------------------------GGGACATCCCGATG........................................................................................................................................................................................................................2711.0010000001000
............................................................................................................................................................................ATCTT---CAAGAACTCG-GGTATC..................................................................................................................2111.0010010000000
.................................................................................................................................................................................................................................................................................CGGTGGTACAGACCAAACTGGATA---CGG------..2711.0010100000000
............................GACC------------------AGGAAGA------------------------GGGACATCCC............................................................................................................................................................................................................................2111.0010000001000
.....................................................................................................................................................................................................GGCATTTTCGAGGGTT------------------CGGA............................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................TGATTGTGCCGGTGGTACA............................1911.0010100000000
............................GACC------------------AGGAAGA------------------------GGGACATCCCG...........................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................ATAACGATATCGA---------CAACCAACC...................................................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................................ATCGGCATTTTCGAGGGTT------------------CGGAGGGC........................................................................2711.0010100000000
..........................................................................................................................................................................................................................................................CGTGCAGGAGGGAGTGATTGT........................................2111.0010100000000
..................................................................................................................................................................................................................GTT------------------CGGAGGGCGAACAGGA................................................................1911.0010100000000
.................................................................................................AACGATAACGATATCGA---------CAACCAACCC..................................................................................................................................................................................2711.0010100000000
................................................................................................................................AACCCATAGAGACGCCCGTAA---------------CTCCG..............................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................GCCCGTGCAGGAGGGAGTGATTGTGCC.....................................2711.0010100000000
......................................................AGA------------------------GGGACATCCCGATGACA.....................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................CGA---------CAACCAACCCATAGAGAC..........................................................................................................................................................................2111.0010010000000
.....................................................AAGA------------------------GGGACATCCCGATGACAACG..................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................GTAA---------------CTCCGGACATCTT---CAAG...............................................................................................................................2111.0010100000000
.................................................................................................................................................GTAA---------------CTCCGGACATCTT---CAAGAACTCG-........................................................................................................................2711.0010100000000
.......................................................................................................AACGATATCGA---------CAACCAACCCATAGAGAC..........................................................................................................................................................................2911.0010100000000
.............................................................................................................ATCGA---------CAACCAACCCATAG..............................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................CATCTT---CAAGAACTCG-GGT.....................................................................................................................1911.0010000001000
.............................................................................................................................................................................................................................................................GCAGGAGGGAGTGATTGTGCC.....................................2111.0010100000000
..............................................................................................................................................................................CTT---CAAGAACTCG-GGTATC..................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................................GGTGGTACAGACCAAACTGG.................2011.0010100000000
..........................................................................................................................................................................................................................................................................................AGACCAAACTGGATA---CGG------AA2011.0010100000000
................GAC---------GACC------------------AGGAAGA------------------------GGGACATCCC............................................................................................................................................................................................................................2411.0010100000000
...................................................................................GACATCCCGATGACAACGATAACGATATC.......................................................................................................................................................................................................2911.0010100000000
...............................................................................................................................................................................TT---CAAGAACTCG-GGTATCGGC...............................................................................................................2111.0010000100000
...................................................................................................................................CCATAGAGACGCCCGTAA---------------CTCCGGAC...........................................................................................................................................2611.0010100000000
........................................................................................................................................GAGACGCCCGTAA---------------CTCCGGACAT.........................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................AACAGGAGCCCGTGCAGGA....................................................1911.0010100000000
......................................................................................................................................................................................................................................................................................GTACAGACCAAACTGGATA---CGG------..2211.0010100000000
...............................................................................................................................................................................................................................................GAACAGGAGCCCGTGCAGGAGGGAGT..............................................2611.0010000100000
..................................................................................................................................................................................................................................................................AGGGAGTGATTGTGCCGGT..................................1911.0010100000000
.................................................................................................................................................................................................................................................ACAGGAGCCCGTGCAGGAGG..................................................2011.0010100000000
.......................................................................................................AACGATATCGA---------CAACCAACCCATAG..............................................................................................................................................................................2511.0010100000000
....................................................................................................................................CATAGAGACGCCCGTAA---------------CTCCGGAC...........................................................................................................................................2511.0010100000000
droPer2
TCA------------AAAA---------GCCG------------------TA--------------------------------------C---G------------------ACAACGGCGACGCCAAGGACGG-----------------------AGCCAATCAACAGCCGCTT-CTTA---A---CG---------------------------------------------------------------------GCAACGGCTCGGCCAACGGAG------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................CGCTT-CTTA---A---CG---------------------------------------------------------------------GCAACGGCTCGGC......................................2513.003030000
...............................................................................................................................AAGGACGG-----------------------AGCCAATCAACAGC...........................................................................................................................................2212.002200000
..................................................................................................................CAACGGCGACGCCAAGGACGG-----------------------AGC......................................................................................................................................................2412.002101000
....................................................................................................................................................................................TA---A---CG---------------------------------------------------------------------GCAACGGCTCGGCCAACGG................................2411.001010000
.....................................................................................................................................................................CAACAGCCGCTT-CTTA---A---C.........................................................................................................................1811.001100000
...................................................A--------------------------------------C---G------------------ACAACGGCGACGCCAAGG....................................................................................................................................................................................2111.001010000
...............................G------------------TA--------------------------------------C---G------------------ACAACGGCGACGCCAAGGACGG-----------------------A........................................................................................................................................................2811.001001000
............................................................................................................................................................................CGCTT-CTTA---A---CG---------------------------------------------------------------------GCAACGGCC..........................................2111.001100000
..............................CG------------------TA--------------------------------------C---G------------------ACAACGGCGACGCCAAG.....................................................................................................................................................................................2311.001010000
..............................CG------------------TA--------------------------------------C---G------------------ACAACGGCGACG..........................................................................................................................................................................................1811.001010000
..................................................................................................................CAACGGCGACGCCAAGGACGG-----------------------AGCC.....................................................................................................................................................2511.001010000
..............................................................................................G------------------ACAACGGCGACGCCAAGGACGG-----------------------AG.......................................................................................................................................................2511.001000001
...................................................A--------------------------------------C---G------------------ACAACGGCGACGCCAAGGACGG-----------------------A........................................................................................................................................................2611.001000001
.............................................................................................................................................................................GCTT-CTTA---A---CG---------------------------------------------------------------------GCAACGGCT..........................................2011.001000001
..................................................................................................................................................................................CTTA---A---CG---------------------------------------------------------------------GCAACGGCTCGGC......................................2011.001010000
...................................................................................................................AACGGCGACGCCAAGGACGG-----------------------AGC......................................................................................................................................................2311.001010000
..................................................................................................................CAACGGCGACGCCAAGGACGG-----------------------AG.......................................................................................................................................................2311.001000001
droWil2
CGA------------CAACAAC-------GAC--------------------------------------GA------------------C---------GACGACAAATACGA---------TCGGACACCCATTGAGGCACCAT------------------CGCCAAGTGAATT---CGATGAGAAG-AGCATTGGCATCTATGCGGGTT--------CAGACGGGC-ATCAGGATCAGGCCAAGCCGGTCAACGAAGATGTCATTGTTCCAGTGGTTGAAACCAAATTGGACA---CAAGT------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................ATCAGGATCAGGCCAAGCCGGT..........................................................2218.00810430
..........................................................................................................................................................................GTGAATT---CGATGAGAAG-AGCATTGGC...............................................................................................................2615.00500320
..........................................................................................................................................................................GTGAATT---CGATGAGAAG-AGC.....................................................................................................................2015.00500410
....................................................................................................................................................................................CGATGAGAAG-AGCATTGGC...............................................................................................................1913.00300120
.....................................................................................................................................................................................GATGAGAAG-AGCATTGGCAT.............................................................................................................2013.00300300
............................................................................................................ATACGA---------TCGGACACCCATTGAGGC..........................................................................................................................................................................2413.00300120
.....................................................................................................................................................................................................................................C-ATCAGGATCAGGCCAAGCCGGT..........................................................2313.00300300
...................................................................................................................................................................................................................................................................................GTGGTTGAAACCAAATTGGACA---C..........2312.00220000
............................................................................................................................................................................GAATT---CGATGAGAAG-AGCATTGGC...............................................................................................................2412.00200200
..........................................................................................................AAATACGA---------TCGGACACCCATT...............................................................................................................................................................................2112.00200200
............................................................................................................ATACGA---------TCGGACACCCATTGAGGCACCAT------------------...................................................................................................................................................2912.00210100
.........................................................................................................CAAATACGA---------TCGGACACCCATT...............................................................................................................................................................................2212.00200200
.......................................................................................................................................................................................................................................ATCAGGATCAGGCCAAGCC.............................................................1912.00200020
..........................................................................................................AAATACGA---------TCGGACACCC..................................................................................................................................................................................1812.00220000
...........................................................................................................................................................................................................................................................GTCAACGAAGATGTCATTGTTCCA....................................2412.00202000
.................................................................................................................................................................................................................................................................GAAGATGTCATTGTTCCAGT..................................2012.00200110
................................................................................................................................................................................T---CGATGAGAAG-AGCATTGGC...............................................................................................................2012.00200200
....................................................................................................................................................................................................................................................................................TGGTTGAAACCAAATTGGAC...............2012.00220000
.............................................................................................................................................................................................................................................................CAACGAAGATGTCATTGTTCCAGT..................................2412.00201010
........................................................................................................ACAAATACGA---------TCGGACACCCATTGAGGC..........................................................................................................................................................................2812.00201100
...........................................................................................................AATACGA---------TCGGACACCCATTGAGG...........................................................................................................................................................................2412.00210010
..........................................................................................................AAATACGA---------TCGGACACCCATTGAGGC..........................................................................................................................................................................2612.00200110
............................................................................................................................................................................GAATT---CGATGAGAAG-AGC.....................................................................................................................1812.00200110
......................................................................................................CGACAAATACGA---------TCGGACACCCATTGAGG...........................................................................................................................................................................2911.00100100
.................................................................................................................................................................................................................................................................GAAGATGTCATTGTTCCAGTGGTT..............................2411.00100100
......................................................................GA------------------C---------GACGACAAATACGA---------TCGGG.......................................................................................................................................................................................2211.00100100
...........................................................................................................................................................................................AAG-AGCATTGGCATCTATGC.......................................................................................................2011.00100100
.........................................................................................................CAAATACGA---------TCGGACACCCATTGAGG...........................................................................................................................................................................2611.00110000
................................................................................................................................CACCCATTGAGGCACCAT------------------CGCCAAGTGA.........................................................................................................................................2811.00100010
.................................................................................................................................................................................................................................................................GAAGATGTCATTGTTCCAG...................................1911.00100100
................................................................................................................GA---------TCGGACACCCATTGAGGCAC........................................................................................................................................................................2211.00110000
................................................................................................................................................AT------------------CGCCAAGTGAATT---CGATGAGAAG-AGC.....................................................................................................................2811.00100100
..............................................................................................................................................................................................................................................................AACGAAGATGTCATTGTTCCAGTG.................................2411.00100010
..............................................................................................................................................................................................................................................TCAGGCCAAGCCGGTCAACGAA...................................................2211.00101000
......................................................................GA------------------C---------GACGACAAATACGA---------TCGGACACCCATT...............................................................................................................................................................................3011.00100100
..................................................................................................................................................................................................................................................GCCAAGCCGGTCAACGAAGATGT..............................................2311.00100100
..............................................................................................................................................................................ATT---CGATGAGAAG-AGCATTGG................................................................................................................2111.00100100
..........................................................................................................................................................................................................................................................................ATTGTTCCAGTGGTTGAAAC.........................2011.00101000
.......................................................................................................GACAAATACGA---------TCGGACACCCATTG..............................................................................................................................................................................2511.00100010
......................................................................................................................................................................................................................................................AGCCGGTCAACGAAGATGTC.............................................2011.00100100
.........................................................................................................................................................................................................................................CAGGATCAGGCCAAGCCGGT..........................................................2011.00101000
..............................................................................................................................................................................................................................AGACGGGC-ATCAGGATCAGGCCAAGCC.............................................................2711.00100010
.......................................................................................................GACAAATACGA---------TCGGACACCCATTGAGGC..........................................................................................................................................................................2911.00100100
.................................................................................................................................................................................................................................................................GAAGATGTCATTGTTCCAGTG.................................2111.00100010
.......................................................................................................................................................................CAAGTGAATT---CGATGAGAAG-AGC.....................................................................................................................2311.00100010
.........................................................................................................................................................................AGTGAATT---CGATGAGAAG-AGC.....................................................................................................................2111.00100100
........................................................................................................................................................................AAGTGAATT---CGATGAGAAG-A.......................................................................................................................2011.00100100
.........................................................................................................CAAATACGA---------TCGGACACCCAT................................................................................................................................................................................2111.00100100
........................................................................................................................................................................................GAGAAG-AGCATTGGCATCTATGC.......................................................................................................2311.00100100
....................................................................................................................................................................................CGATGAGAAG-AGCATTGGCATC............................................................................................................2211.00101000
................................................................................................................................................................................................................................................................CGAAGATGTCATTGTTCCA....................................1911.00100010
...........................................................................................................AATACGA---------TCGGACACCCAT................................................................................................................................................................................1911.00110000
............................................................................................................ATACGA---------TCGGACACCCATTGAGG...........................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................................................................................AAGCCGGTCAACGAAGATGTC.............................................2111.00100100
...........................................................................................................................................................................TGAATT---CGATGAGAAG-AGCATTG.................................................................................................................2311.00100010
....................................................................................................................................................................................CGATGAGAAG-AGCATTGGCATCTATGCG......................................................................................................2811.00100100
.................................................................................................................................................................................................................................CGGGC-ATCAGGATCAGGCCAAGCC.............................................................2411.00100001
..............................................................................................................................................................................ATT---CGATGAGAAG-AGCATTGGC...............................................................................................................2211.00100100
............................................................................................................................................................................GAATT---CGATGAGAAG-AGCATTGGCAT.............................................................................................................2611.00100010
..................................................................................................................................................................................................................................................GCCAAGCCGGTCAACGAAGATGTC.............................................2411.00100100
...............................................................................................................................................................................................................................GACGGGC-ATCAGGATCAGGCCAAGCCGGT..........................................................2911.00100010
..............................................................................................................................................................................................................................................................AACGAAGATGTCATTGTTCC.....................................2011.00100010
........................................................................................................ACAAATACGA---------TCGGACACCC..................................................................................................................................................................................2011.00110000
...............................................................................................................................ACACCCATTGAGGCACCAT------------------C..................................................................................................................................................2011.00100010
.....................................................................................................................................................................................GATGAGAAG-AGCATTGGC...............................................................................................................1811.00100010
......................................................................GA------------------C---------GACGACAAATACGA---------TCGGAC......................................................................................................................................................................................2311.00101000
......................................................................................................................................................................................................................................................................TGTCATTGTTCCAGTGGTT..............................1911.00100010
....................................................................................................................................................................CGCCAAGTGAATT---CGATGAGAAG-AGCATT..................................................................................................................2911.00100100
................................................................................................................................................AT------------------CGCCAAGTGAATT---CGATGAGAAG-AG......................................................................................................................2711.00100100
....................................................................................................................................................................CGCCAAGTGAATT---CGATGAGAAG-A.......................................................................................................................2411.00100001
........................................................................................................................................................................................................ATCTATGCGGGTT--------CAGACGGGC-................................................................................2230.67201100
..................................................................................................................................................................................................................GTT--------CAGACGGGC-ATCAGGATCAGGC...................................................................2520.50101000
................................................................................................................................................................................................................GGGTT--------CAGACGGGC-ATCAG...........................................................................1920.50101000
....................................................................................................................................................................................................TGGCATCTATGCGGGTT--------CAGACG....................................................................................2320.50100010
..........................................................................................................................................................................................................CTATGCGGGTT--------CAGACGGGC-ATCAGG..........................................................................2620.50101000
.....................................................................................................................................................................................................GGCATCTATGCGGGTT--------CAGACGGGC-A...............................................................................2620.50101000
..........................................................................................................................................................................................................CTATGCGGGTT--------CAGACGGG..................................................................................1930.33100100
.....................................................................................................................................................................GCCAAGTGAATT---CGATGA.............................................................................................................................1830.33100010
.......................................................................................................................................................................................................CATCTATGCGGGTT--------CAGACGGGC-................................................................................2330.33100010
.......................................................................................................................................................................................................CATCTATGCGGGTT--------CAGACGG...................................................................................2130.33100010
....................................................................................................................................................................CGCCAAGTGAATT---CGATG..............................................................................................................................1830.33100010
........................................................................................................................................................................................................ATCTATGCGGGTT--------CAGACG....................................................................................1930.33100100
.....................................................................................................................................................................GCCAAGTGAATT---CGATGAGAA..........................................................................................................................2130.33101000
....................................................................................................................................................................CGCCAAGTGAATT---CGATGAG............................................................................................................................2030.33100100
droVir3
TGAACGGCAACGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------GGCTGGGCAGCAGCCGCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGCCAACGGCGATG---------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGC......................................2016.006500100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................G-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGC......................................2113.003003000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGC......................................2413.003001200000000000000000000000000000000000000000000000000000000000
...............................G------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------GGCTGGGC.................................................................................................................................................2613.003002100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGC......................................2512.002002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................G-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGCC.....................................2212.002002000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACT........................................2312.002002000000000000000000000000000000000000000000000000000000000000
.GAACGGCAACGGCAAGAA---------GCC........................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.GAACGGCAACGGCAAGAA---------GCT........................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..............................CG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------GGCTGG...................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGCCAACGGC...............................2711.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................G-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACT........................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AAGGATGG-----------------------GGCTGGGCAGC..............................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCAAGGATGG-----------------------GGCTGGGCAGCAGCCGCT.......................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................C---G------------------A---------TAGCAAGGATGG-----------------------GGCTGGGC.................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TAGCAAGGATGG-----------------------GGCTGGGCAGCAGC...........................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGCC.....................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGCTG-CTGA---A---TG---------------------------------------------------------------------GCAACG.............................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GCAGCCGCTG-CTGA---A---TG---------------------------------------------------------------------GCAAC..............................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATG.................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...............................G------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------GGCT.....................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................AACGGCACTGCCAACGGCGAT............................2111.001000000000000000010000000000000000000000000000000000000000000000
.............CAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------G........................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................CAAGGATGG-----------------------GGCTGGGCAGCAGCCGCT.......................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGC......................................2211.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................ATGG-----------------------GGCTGGGCAGCAGC...........................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGCTG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGCC.....................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................CG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------G........................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................TGA---A---TG---------------------------------------------------------------------GCAACGGCACTGC......................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AGCAAGGATGG-----------------------GGCTGGGG.................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...............................G------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------GGCTGGGG.................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
..............AAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATG.................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
............................GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------GGCT.....................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
..............AAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------.........................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
...........GGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAGGATGG-----------------------G........................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................TG-CTGA---A---TG---------------------------------------------------------------------GCAACGGCACTGCCAACG.................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCAAGGATGG-----------------------GGCTGGGCAGCAGC...........................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
TGAATGGATCGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAAGACGG-----------------------TGCTGGACAGCAGCCGCTG-CTCA---A---TG---------------------------------------------------------------------GCAATGGAACAGCCAATGGAGATG---------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........CGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGC........................................................................................................................................................................................2314.004201001
.GAATGGATCGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------T...........................................................................................................................................................................................2813.003000003
.GAATGGATCGGGCAAGAA---------GCC........................................................................................................................................................................................................................................................................................2113.003300000
...............................G------------------TA--------------------------------------C---G------------------A---------TAGCAAAGACGG-----------------------T........................................................................................................................................................1913.003100002
.....................................................................................................................................................................................................................................................................CAATGGAACAGCCAATGGA...............................1912.002000002
....................................................................................................................................................................................CA---A---TG---------------------------------------------------------------------GCAATGGAACAGCCAATGGAGA.............................2712.002200000
.......ATCGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGC........................................................................................................................................................................................2512.002200000
.............CAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGC........................................................................................................................................................................................1911.001000001
..............................................................................................................................CAAAGACGG-----------------------TGCTGGACAGCA.............................................................................................................................................2111.001100000
......................................................................................................................................................................AGCAGCCGCTG-CTCA---A---TG---------------------------------------------------------------------GCAATGGA...........................................2611.001100000
.GAATGGATCGGGCAAGAA---------GC.........................................................................................................................................................................................................................................................................................2011.001000001
...............................................................................................................................................................GCTGGACAGCAGCCGCTG-CT...................................................................................................................................2011.001100000
...ATGGATCGGGCAAGAA---------GCC........................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................TG-CTCA---A---TG---------------------------------------------------------------------GCAATGGAACA........................................2011.001100000
................................................................................................................................................................CTGGACAGCAGCCGCTG-CT...................................................................................................................................1911.001000010
................................................................................................................................................................................G-CTCA---A---TG---------------------------------------------------------------------GCAATGGAACAGC......................................2111.001100000
...............AGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAAGT...................................................................................................................................................................................2211.001000001
.........CGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------T...........................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................A---A---TG---------------------------------------------------------------------GCAATGGAACAGCCAATGGA...............................2411.001100000
............................................................................................................................AGCAAAGACGG-----------------------TGCTGGACAGCAGCCG.........................................................................................................................................2711.001100000
.........................................................................................................................................................................AGCCGCTG-CTCA---A---TG---------------------------------------------------------------------GCAATG.............................................2111.001100000
.................................................................................................................................................................TGGACAGCAGCCGCTG-CTCA---A---TG---------------------------------------------------------------------...................................................2311.001100000
.....GGATCGGGCAAGAA---------GCCG------------------TA--------------------------------------C---.........................................................................................................................................................................................................................2111.001100000
..AATGGATCGGGCAAGAA---------GCC........................................................................................................................................................................................................................................................................................2011.001000001
...............................G------------------TA--------------------------------------C---G------------------A---------TAGCAAAGACGG-----------------------TGCTGGAC.................................................................................................................................................2611.001100000
.....................................................................................................................................................................CAGCAGCCGCTG-CTCA---A---TG---------------------------------------------------------------------...................................................1911.001100000
............................................................................................................................................................................CGCTG-CTCA---A---TG---------------------------------------------------------------------GCAATGGAACAGCC.....................................2611.001000010
...............AGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAAGACGG-----------------------TG.......................................................................................................................................................2711.001000001
.....................................................................................................................................................................................................................................................................CAATGGAACAGCCAATGGAGA.............................2111.001000001
.....GGATCGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TA..........................................................................................................................................................................................2511.001100000
................................................................................................................................................................CTGGACAGCAGCCGCTG-CTC..................................................................................................................................2011.001100000
........TCGGGCAAGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAA......................................................................................................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................GCAATGGAACAGCCAATGGA...............................2011.001000001
...............AGAA---------GCCG------------------TA--------------------------------------C---G------------------A---------TAGCAAA.....................................................................................................................................................................................2011.001000001
..............................................................................................G------------------A---------TAGCAAAGACGG-----------------------TGCTGG...................................................................................................................................................2011.001100000
...................................................................................................................................................................................TCA---A---TG---------------------------------------------------------------------GCAATGGAACAGC......................................1911.001100000
.GAATGGATCGGGCAAGAA---------GCCG------------------T....................................................................................................................................................................................................................................................................2311.001000001
...............................G------------------TA--------------------------------------C---G------------------A---------TAGCAAAGACGG-----------------------TGCTGG...................................................................................................................................................2411.001100000
..............................CG------------------TA--------------------------------------C---G------------------A---------TAGCAAAGACGG-----------------------TGCTG....................................................................................................................................................2411.001000001
....................................................................................................................................CGG-----------------------TGCTGGACAGCAGCCGCTG-CT...................................................................................................................................2411.001100000
droGri2
TCAATGGCGCCGGGAAGAA---------GCCC------------------TA--------------------------------------C---G------------------A---------TAGCAAGGACAA-----------------------CGCTGGGCAACAGCCACTA-CTTA---A---TG---------------------------------------------------------------------GCAACGGTGCAGCCAATGGCGATG---------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................A---------TAGCAAGGACAA-----------------------CGCTGGGCA................................................................................................................................................2211.00110
.......................................................................................................................................................................................................................................................................ACGGTGCAGCCAATGGCGATG---------------------------2111.00110
..AATGGCGCCGGGAAGAA---------GCCC------------------TA--------------------------------------C---.........................................................................................................................................................................................................................2411.00101
...ATGGCGCCGGGAAGAA---------GCCC------------------.....................................................................................................................................................................................................................................................................2011.00110
TCAATGGCGCCGGGAAGAA---------GCCC------------------TA--------------------------------------.............................................................................................................................................................................................................................2511.00101

Generated: 05/17/2015 at 10:50 PM