ID:

dse_828

 Coordinate:

scaffold_13:1602689-1602729 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.1 -4.0 -3.9

Flybase annnotation

intron [Dsec\GM10150-in]; CDS [Dsec\GM10150-cds]; exon [dsec_GLEANR_10183:1]; CDS [Dsec\GM10150-cds]; exon [dsec_GLEANR_10183:2]

No Repeatable elements found

mature
  1. scaffold_13:1601894-1601913 -
  2. scaffold_13:1602095-1602114 -
  3. scaffold_13:1602296-1602315 -
  4. scaffold_13:1602497-1602516 -
  5. dse_828  scaffold_13:1602697-1602716 -
  6. scaffold_13686:186-205 -
  7. scaffold_13686:387-406 -
  8. scaffold_13686:588-607 -
  9. scaffold_13686:789-808 -
  10. scaffold_13686:992-1011 -
star

Sense Strand Reads

##################################################-----------------------------------------##################################################
AAAGAATCCGAGGACTCCACCACCACAAGTCCTGAGGAGGATGATACTACGTCAGCACCTGGCGAAGATGATGATACTACCGTAGCTCCAGGAGGGACGAAGAGGAAACAACCACCGAGGACCCCGAAGAAACCTCTACAT
**************************************************(((((...)))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V115
head
 M054
female body
...............................................................GAAGATGATGATACTACCGT.......................................................... 20 0 10 3.00 30 30 0 0
.....................................................AGCACCTGGCGAAGATGATG.................................................................... 20 0 9 2.78 25 25 0 0
................................TGAGGAGGATGATACTACGTC........................................................................................ 21 0 1 2.00 2 2 0 0
.......................CACAAGTCCTGAGGAGGAT................................................................................................... 19 0 1 2.00 2 2 0 0
....................................................CAGCACCTGGCGAAGATGATG.................................................................... 21 0 9 1.67 15 15 0 0
.................................................................................................CGAAGAGGAAACAACCACCGAGG..................... 23 0 9 1.33 12 12 0 0
....................................................CAGCACCTGGCGAAGATG....................................................................... 18 0 9 1.33 12 11 1 0
......................CCACAAGTCCTGAGGAGGA.................................................................................................... 19 0 1 1.00 1 1 0 0
................CCACCACCACAAGTCCTGAGGAGG..................................................................................................... 24 0 1 1.00 1 1 0 0
.............ACTCCACCACCACAAGTCCTGAGGAGG..................................................................................................... 27 0 1 1.00 1 1 0 0
..............CTCCACCACCACAAGTCCT............................................................................................................ 19 0 1 1.00 1 1 0 0
..AGAATCCGAGGACTCCAC......................................................................................................................... 18 0 1 1.00 1 1 0 0
............................GTCCTGAGGAGGATGATAC.............................................................................................. 19 0 1 1.00 1 1 0 0
.......CCGAGGACTCCACCACCACAAGT............................................................................................................... 23 0 1 1.00 1 1 0 0
................CCACCACCACAAGTCCTGAGGAGGAT................................................................................................... 26 0 1 1.00 1 1 0 0
...............................CTGAGGAGGATGATACTAC........................................................................................... 19 0 1 1.00 1 1 0 0
.............................TCCTGAGGAGGATGATACTA............................................................................................ 20 0 1 1.00 1 1 0 0
.................CACCACCACAAGTCCTGAGGAGG..................................................................................................... 23 0 1 1.00 1 1 0 0
................CCACCACCACAAGTCCTGAGGAG...................................................................................................... 23 0 1 1.00 1 1 0 0
...........................AGTCCTGAGGAGGATGATAC.............................................................................................. 20 0 1 1.00 1 1 0 0
.............ACTCCACCACCACAAGTCCTGAG......................................................................................................... 23 0 1 1.00 1 1 0 0
.AAGAATCCGAGGACTCCACCACC..................................................................................................................... 23 0 1 1.00 1 1 0 0
......................CCACAAGTCCTGAGGAGG..................................................................................................... 18 0 1 1.00 1 1 0 0
....................CACCACAAGTCCTGAGGAGGATG.................................................................................................. 23 0 1 1.00 1 1 0 0
............................GTCCTGAGGAGGATGATACTACGTC........................................................................................ 25 0 1 1.00 1 1 0 0
.................CACCACCACAAGTCCTGAGGAGGAT................................................................................................... 25 0 1 1.00 1 1 0 0
....................................GAGGATGATACTACGTCAGCACCT................................................................................. 24 0 1 1.00 1 1 0 0
............................GTCCTGAGGAGGATGATACTACGT......................................................................................... 24 0 1 1.00 1 1 0 0
..................ACCACCACAAGTCCTGAGGAGGATG.................................................................................................. 25 0 1 1.00 1 1 0 0
................CCACCACCACAAGTCTTGAGGAGG..................................................................................................... 24 1 1 1.00 1 1 0 0
.....................................................AGCACCTGGCGAAGATGATGATA................................................................. 23 0 9 0.78 7 7 0 0
.................................................................................................CGAAGAGGAAACAACCACCGAG...................... 22 0 9 0.78 7 7 0 0
........................................ATGATACTACGTCAGCACCTGGC.............................................................................. 23 0 10 0.70 7 7 0 0
......................................................GCACCTGGCGAAGATGATG.................................................................... 19 0 9 0.67 6 6 0 0
.....................................................AGCACCTGGCGAAGATGAT..................................................................... 19 0 9 0.56 5 5 0 0
...............................................................................................GACGAAGAGGAAACAACCACCGAGG..................... 25 0 9 0.44 4 4 0 0
....................................................CAGCACCTGGCGAAGATGATGATA................................................................. 24 0 9 0.44 4 4 0 0
.................................................................AGATGATGATACTACCGT.......................................................... 18 0 10 0.40 4 4 0 0
..........................................................................................................AACAACCACCGAGGACCCCGAAG............ 23 0 8 0.38 3 3 0 0
.....................................................AGCACCTGGCGAAGATGATGAT.................................................................. 22 0 9 0.33 3 3 0 0
.....................................................AGCACCTGGCGAAGATGATGATACTACC............................................................ 28 0 9 0.33 3 3 0 0
.................................................................................................CGAAGAGGAAACAACCACCGA....................... 21 0 9 0.33 3 3 0 0
.............................................................................TACCGTAGCTCCAGGAGG.............................................. 18 0 9 0.33 3 3 0 0
.........................................................................ATACTACCGTAGCTCCAGGA................................................ 20 0 9 0.33 3 3 0 0
............................................................................CTACCGTAGCTCCAGGAGG.............................................. 19 0 9 0.33 3 3 0 0
....................................................CAGCACCTGGCGAAGATGAT..................................................................... 20 0 9 0.33 3 3 0 0
................................................................................................................CACCGAGGACCCCGAAGAAACCT...... 23 0 8 0.25 2 2 0 0
............................................................................................................CAACCACCGAGGACCCCGAAGAAACCT...... 27 0 8 0.25 2 2 0 0
.............................................................................................................AACCACCGAGGACCCCGAA............. 19 0 8 0.25 2 2 0 0
.........................................................................................................................CCCCGAAGAAACCTCTACA. 19 0 4 0.25 1 1 0 0
.......................................................................................................................GACCCCGAAGAAACCTCTAC.. 20 0 4 0.25 1 1 0 0
................................................................................................................CACCGAGGACCCCGAAGA........... 18 0 8 0.25 2 2 0 0
......................................................................................................................GGACCCCGAAGAAACCTCT.... 19 0 4 0.25 1 1 0 0
....................................................CAGCACCTGGCGAAGATGA...................................................................... 19 0 9 0.22 2 2 0 0
....................................................................................................AGAGGAAACAACCACCGAGG..................... 20 0 9 0.22 2 2 0 0
........................................................................GATACTACCGTAGCTCCAG.................................................. 19 0 9 0.22 2 2 0 0
...................................................................................................AAGAGGAAACAACCACCGAGG..................... 21 0 9 0.22 2 2 0 0
...........................................ATACTACGTCAGCACCTG................................................................................ 18 0 10 0.20 2 2 0 0
.........................................................................................AGGAGGGAAGAAGAGTAA.................................. 18 2 5 0.20 1 0 1 0
.......................................GATGATACTACGTCAGCACCT................................................................................. 21 0 10 0.20 2 2 0 0
..........................................GATACTACGTCAGCACCTGGC.............................................................................. 21 0 10 0.20 2 2 0 0
.....................................................AGCACCTGGCGATGATGAT..................................................................... 19 1 11 0.18 2 2 0 0
........................................................................................CAGTAGGGAAGAAGAGGAA.................................. 19 2 6 0.17 1 0 0 1
.........................................................................................................AAACAACCACCGAGGACCCCGAAG............ 24 0 8 0.13 1 1 0 0
...............................................................................................................CCACCGAGGACCCCGAAGA........... 19 0 8 0.13 1 1 0 0
...............................................................................................................CCACCGAGGACCCCGAAGAA.......... 20 0 8 0.13 1 1 0 0
..............................................................................................................ACCACCGAGGACCCCGAA............. 18 0 8 0.13 1 1 0 0
............................................................................................................CAACCACCGAGGACCCCGAA............. 20 0 8 0.13 1 1 0 0
......................................................................................................AGGAAACAACCACCGAGGACCCCGAAG............ 27 0 8 0.13 1 1 0 0
..........................................................................................................AACAACCACCGAGGACCCCGAA............. 22 0 8 0.13 1 1 0 0
...........................................................................................................ACAACCACCGAGGACCCCGAAGAA.......... 24 0 8 0.13 1 1 0 0
..............................................................................................................ACCACCGAGGACCCCGAAG............ 19 0 8 0.13 1 1 0 0
...........................................................................................................ACAACCACCGAGGACCCCGAAG............ 22 0 8 0.13 1 1 0 0
.............................................................................................................AACCACCGAGGACCCCGAAGA........... 21 0 8 0.13 1 1 0 0
...............................................................................................................CCACCGAGGACCCCGAAG............ 18 0 8 0.13 1 1 0 0
............................................................................................................CAACCACCGAGGACCCCGAAGAA.......... 23 0 8 0.13 1 1 0 0
.............................................................................................................AACCACCGAGGACCCCGAAGAAACCT...... 26 0 8 0.13 1 1 0 0
.........................................................................................................AAACAACCACCGAGGACCCCGAAGAAA......... 27 0 8 0.13 1 1 0 0
............................................................................................................CAACCACCGAGGACCCCGAAG............ 21 0 8 0.13 1 1 0 0
...................................................................................................AAGAGGAAACAACCACCGAG...................... 20 0 9 0.11 1 1 0 0
........................................................ACCTGGCGAAGATGATGATACTACCAT.......................................................... 27 1 9 0.11 1 1 0 0
..................................................GTCAGCACCTGGCGAAGATGATG.................................................................... 23 0 9 0.11 1 1 0 0
....................................................CAGCACCTGGCGAAGATGATGATACT............................................................... 26 0 9 0.11 1 1 0 0
.......................................................CACCTGGCGAAGATGATGATA................................................................. 21 0 9 0.11 1 1 0 0
......................................................GCACCTGGCGAAGATGATGATACTACC............................................................ 27 0 9 0.11 1 1 0 0
.....................................................AGCACCTGGCGAAGATGATGATACT............................................................... 25 0 9 0.11 1 1 0 0
..................................................GTCAGCACCTGGCGAAGATG....................................................................... 20 0 9 0.11 1 1 0 0
.....................................................AGCACCTGGCGAAGATGATGATAC................................................................ 24 0 9 0.11 1 1 0 0
......................................................GCACCTGGCGAAGATGATGATA................................................................. 22 0 9 0.11 1 1 0 0
...............................................................................................GACGAAGAGGAAACAACCACCG........................ 22 0 9 0.11 1 1 0 0
...................................................................................................AAGAGGAAACAACCACCGCG...................... 20 1 9 0.11 1 1 0 0
..............................................................CGAAGATGATGATACTACCGT.......................................................... 21 0 9 0.11 1 1 0 0
.....................................................AGCACCTGGCGAAGATGA...................................................................... 18 0 9 0.11 1 1 0 0
.................................................................................................CGAAGAGTAAACAACCACCGAGG..................... 23 1 9 0.11 1 1 0 0
.......................................................CACCTGGCGAAGATGATG.................................................................... 18 0 9 0.11 1 1 0 0
.....................................................AGCACCTGCCGAAGATGATGAT.................................................................. 22 1 9 0.11 1 1 0 0
.................................................................................................CGAAGAGGAAACGACCACCGAGG..................... 23 1 9 0.11 1 1 0 0
.......................................................CACTTGGCGAAGATGATG.................................................................... 18 1 9 0.11 1 1 0 0
............................................................GGCGAAGATGATGATACTACC............................................................ 21 0 9 0.11 1 1 0 0
.....................................................AGCACCTTGCGAAGATGATGATA................................................................. 23 1 9 0.11 1 1 0 0
........................................................................GATACTACCGTAGCTCCA................................................... 18 0 9 0.11 1 1 0 0
...........................................................TGGCGAAGATGATGATACTACCGT.......................................................... 24 0 9 0.11 1 1 0 0
......................................................GCACCTGGCGAAGATGAT..................................................................... 18 0 9 0.11 1 1 0 0
..........................................................................TACTACCGTAGCTCCAGG................................................. 18 0 9 0.11 1 1 0 0
............................................................................CTACCATAGCTCCAGGAGG.............................................. 19 1 9 0.11 1 1 0 0
......................................................GCACCTGGCGAAGATGATGA................................................................... 20 0 9 0.11 1 1 0 0
....................................................................................................AGACGAAACAACCACCGAGG..................... 20 1 9 0.11 1 1 0 0
.................................................................................................CGAAGAGGAAACAACCATCGAG...................... 22 1 9 0.11 1 1 0 0
..........................................................................TACTACCGTAGCTCCAGGA................................................ 19 0 9 0.11 1 1 0 0
...........................................................................ACTACCGTAGCTCCAGGAGG.............................................. 20 0 9 0.11 1 1 0 0
.................................................................................................CGAAGAGGAAACAACCACCG........................ 20 0 9 0.11 1 1 0 0
.......................................................CACCTGGCGAAGATGATGATACTACC............................................................ 26 0 9 0.11 1 1 0 0
........................................................................GATACTACCGTAGCTCCATGA................................................ 21 1 9 0.11 1 1 0 0
...............................................................GAAGATGATGATACTACCGTAGCTCC.................................................... 26 0 9 0.11 1 1 0 0
........................................................ACCTGGCGAAGATTATGATA................................................................. 20 1 9 0.11 1 1 0 0
.......................................................CACCTGGCGAAGATGATGATACTAC............................................................. 25 0 9 0.11 1 1 0 0
....................................................CAGCACCTGGCGAAGATGATGA................................................................... 22 0 9 0.11 1 1 0 0
.................................................................................................CGAAGAGGAAACAACCACCGAGGA.................... 24 0 9 0.11 1 1 0 0
...............................................................................................GACGAAGAGGAAACAACCACCGA....................... 23 0 9 0.11 1 1 0 0
.............................................................................TACCATAGCTCCAGGAGG.............................................. 18 1 9 0.11 1 1 0 0
...........................................ATACTACGTCAGCACCTGGCGAAGATG....................................................................... 27 0 9 0.11 1 1 0 0
......................................................GCACCTGGCGAAGATGATGATACT............................................................... 24 0 9 0.11 1 1 0 0
..........................................................CTGGCGAAGATGATGATACTACCGT.......................................................... 25 0 9 0.11 1 1 0 0
........................................ATGATACTACGTCACCACCT................................................................................. 20 1 10 0.10 1 1 0 0
........................................ATGATACTACGTCAGCACCT................................................................................. 20 0 10 0.10 1 1 0 0
.........................................TGATACTACGTCAGCACCT................................................................................. 19 0 10 0.10 1 1 0 0
...............................................................................................GACGAAGAGGAAACAACCA........................... 19 0 10 0.10 1 1 0 0
...............................................................................................GACGAAGAGGAAACAACC............................ 18 0 10 0.10 1 1 0 0
........................................ATGATACTACGTCAGCACCTGGCGAAG.......................................................................... 27 0 10 0.10 1 1 0 0
.......................................................CACCTGGCGATGATGATGAT.................................................................. 20 1 10 0.10 1 1 0 0
..........................................GATACTACGTCAGCACCT................................................................................. 18 0 10 0.10 1 1 0 0
.....................................................AGCACCTGGCGATGATGATGAT.................................................................. 22 1 10 0.10 1 1 0 0
.............................................ACTACGTCAGCACCTGGC.............................................................................. 18 0 10 0.10 1 1 0 0
.....................................................AGCACCTGGCGATGATGA...................................................................... 18 1 11 0.09 1 1 0 0
.....................................................AGCACCTGGCGATGATGATG.................................................................... 20 1 11 0.09 1 1 0 0
.......................................................CACCTGGCGATGATGATGA................................................................... 19 1 11 0.09 1 1 0 0

Anti-sense strand reads

TTTCTTAGGCTCCTGAGGTGGTGGTGTTCAGGACTCCTCCTACTATGATGCAGTCGTGGACCGCTTCTACTACTATGATGGCATCGAGGTCCTCCCTGCTTCTCCTTTGTTGGTGGCTCCTGGGGCTTCTTTGGAGATGTA
**************************************************(((((...)))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
............................CAGGACTCCTCCTAGTTTG.............................................................................................. 19 2 1 2.00 2 2 0
........GTTGCTGAGGTGGTGGTG................................................................................................................... 18 2 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_13:1602639-1602779 - dse_828 AAAGAAT-------CCGAGGACTCC---ACCACCAC---AAGTCCT---GAGGA---------GGATGATACTACGTCAGCACCTG---GCGAAGATGA------------------------------TGATACTACCGTAGCTCCAGGAGG--GA------CGAAGAGGAA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------AACCTCTACAT
droSim2 3r:22289296-22289437 - AAAGAAT-------CCGAGGAGTCC---ACCACGAC---AAGTCCT---GAAGA---------TGATGATACTACGTCAGCACCTG---GCGAAGATGA------------------------------TGATACTACCGTAGCTCCAGGAGGT-GA------CGAAGAGGAA---ACAA------------------------CCACCGAGAACCCCG---------------------------AAGA-------AACCTCTACAT
dm3 chr3R:22829485-22829626 - AAGGAAT-------CCGAGGAGTCC---ACCACTTC---AAGTCCT---GAAGA---------TGATGATACTACGTCAGCACCTG---GCGAAGATGA------------------------------TGATACTACCGCAGCTCCAGGAGGT-GA------CGAAGAGGAA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------GACCACTACAT
droEre2 scaffold_4820:5207541-5207693 + ATGGAAC--------CGAGGACTCG---ACCACCGC---AGCTCCT---GAAGA---------GACTACAACGACCGAGAAACCCG------AAGAACCTTC---------------------------CACTACAACCGAAGAACCCGAGGAG----------------------TCCACTACTGAAGTTTCCGAGGAGTCTACAACAGAAGAGCCCG---------------------------AAAA-------CAATCCTACAT
droYak3 3R:23655082-23655229 + AAGGAAT-------CCGAGGAGTCG---ACCACTAC---AACCCCT---GAAGA---------TAATAATACTACGTCTGCTCCTG---------------------------GAGACGGCGAAGACGATGACACTACCCCAGCTCCCGGAGAC-GG------CGAAGAGGAA---TCAA------------------------CCACAGAGGACCCCG---------------------------AAGA-------AAACTCCACTA
droEug1 scf7180000409770:297411-297587 - AGAGGATGGAGGAGATGACGATACC---ACCACCGC---TGCTCCA---GAGGATGGAGGAGATGATGATACCACCACGGCTG------------------------CTCCAGAAGATGGAGGAGATGATGATACTACCGCTGCTCCAGAGGAT-GG------AGGAGATGAT---GATA------------------------CCACC------------------------ACCGCTGCTCCAGAGGATGGAGGAGATGATGATAC
droBia1 scf7180000302113:3107504-3107631 - GAGGAAT----------------CG---ACCACCGA---TGAACCA---GAAG---------------AAACCACCACTGCTCCAG------AGGA---------------------------------ATCGACAACCAATGAACCAGAAGAGA-------------------------CGACCGCTGCTCCAGAGGAATCGACCACCGATGAACCAG---------------------------AAGA-------GACGACTGC--
droTak1 scf7180000410579:443801-443928 + GAAGAAC-------CCGAGAAGGAC---ACTACAAC---TACCCA---------------------------------AAAACCTG------AAGAGCCGTC---------------------------GTCTACAACTGAGGAACCAGAAGAGA-------------------------CGACTGCCGCTCCAGAGGATTCGACCACCCAGGAACCAG---------------------------AAGA-------GACTTCTGT--
droEle1 scf7180000491280:883857-884004 - AAACAAC-------CAGAAGAGTCA---TCTACTACTGAAGAACCC---GAGGA---------G---TCTACAACCGAAGAACCCG------AAGAAGTTTC---------------------------TACAACAACCAAAAAACCAGAAGAG-TCCGAGCCCGAGGAAGTATCTACGA------------------------CAACCGAAGCACCCG---------------------------AAGA-------AGTCTCTA---
droRho1 scf7180000780254:12278-12407 - AAAGAAC-------CCGAGGAGTCA---ACTACAGC---TGACCCA---GAAGA---------G---TCAACAACCGACGAACCCG------AAGAAGTCTC---------------------------TACAACAACCAGAAAGCCT----------------GAAGAACCA---TCTA------------------------CAACTGTAGAACCCG---------------------------AAGA-------GTCGACTACAG
droFic1 scf7180000453776:13415-13559 - GAAGAAC-------CAGAAGAGGAC---TCTACTAC------------------------------------ACCCGAAGAACCAG------AAGAGGACTCTACTACACCCGAAGTACCAGAAGATGATGATACCACCGCTGCTCCAGAGGAT-GA------TATAGAAGAA---TCGA------------------------CAACCGAGAAACCAG---------------------------AAGA-------TGACTCTA---
droKik1 scf7180000302810:581404-581536 + ACTGAAA-------T------TCCATCGACCACGGC---TAAACCTACTGAGTT---------G---CCGACAGCTACGACTCCCG---------------------------GAGAT---GGAGAGGATGACACTACTTCAGCCCCT----------------GAGGATGTT---TCTA------------------------CCACCGAAGAACCCG---------------------------AAGA-------GATTTCTACCA
droAna3 scaffold_12911:3752228-3752343 - ATCGTAC-------CAGAGACTCCA---ACTGTCACTACAACCACT---GAGGA---------G---CCCACCA---------------------------------------------------------CCACCACCATCGTACCAGCGACT-CC------AACTGTCACC---ACAA------------------------CCACTGAGGAGCCCA---------------------------CCAC-------GACCACCAT--
droBip1 scf7180000396640:609472-609583 - GAGGCTT-------CA------------------------AGTGGT---GAAG---------------AAACTACTGCTGCGCCAG------GAGGTGAGGAGA---CTACAGAAGGTTCAGGAGGAGAGGAGACCACTGCTTCTCCT-------------------------------------------------------------GGAG---GAG---------------------------AAGA-------AACAACAGCTA
dp5 2:8439099-8439232 - GATGGAG-------AAGATGATTCG---ACCACTGC---TGCACCT---GAAGA---------AGGTTCCACCACTCCAGCACCTGGTGGCGAAGATGA------------------------------TTCTACCACAGCTGCACCTGAAGAT-GG------AGGTGATGAC---TCTA------------------------CAACTGCTGCCCCAG---------------------------AAGA------------------
droPer2 scaffold_0:2272778-2272937 - GATGGAG-------AAGATGATTCG---ACCACTGC---TGCACCT---GAAGA---------AGGTTCCACCACTCCAGCACCTGGTGGCGAAGATGA------------------------------TTCTACCACAGCTGCACCTGAAGAT-GG------AGGTGATGAC---TCTA------------------------CAACTGCTGCCCCAGAAGATGGAGGCGATG------------ATTC-------TACCACCGCAG
droWil2 scf2_1100000004902:7765925-7766072 + GAAGACA-------ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------CAACGAAACAACCGCTGCTCCTG------AAGACAACGAGA---CCACCGATGCTCCCGAGGACAACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------AAACAACCGCTGCTCCGGAAGA-------CAACG---AAA
droVir3 scaffold_12855:5545035-5545134 - GAAACGC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCAG------AAGA---------------------------------ATCTACTCCTGATGTACCTGAGGAGA-------------------------CTACCCCGG---------------CGCCAGAAGAGCCCG---------------------------TAGA-------AACCACTAAAA
droGri2 scaffold_14906:8455049-8455168 + CAAGAAC-------CGGAAGATTCA---ACCACCGA---GGGCTCT---GGCGA---------AGGTGAAACCACAAATGCAACCG---ATGAACCTGC------------------------------CGAAACAACCGAAGAACCCG-------------------AGGAA---TCGA------------------------CCACAGAAAGTTCCG---------------------------GCGA-------A----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AAAGAAT-------CCGAGGACTCC---ACCACCAC---AAGTCCT---GAGGA---------GGATGATACTACGTCAGCACCTG---GCGAAGATGA------------------------------TGATACTACCGTAGCTCCAGGAGG--GA------CGAAGAGGAA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------AACCTCTACATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................GAAGATGA------------------------------TGATACTACCGT...............................................................................................................................20103.003000300
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................2092.782500250
.............................................T---GAGGA---------GGATGATACTACGTC..............................................................................................................................................................................................2112.0020020
.................................CAC---AAGTCCT---GAGGA---------GGAT.........................................................................................................................................................................................................1912.0020020
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................2191.671500150
...................................................................................................................................................................CGAAGAGGAA---ACAA------------------------CCACCGAGG.......................................................2391.331200120
.............................................................................CAGCACCTG---GCGAAGATG..........................................................................................................................................................................1891.331200111
................................CCAC---AAGTCCT---GAGGA---------GGA..........................................................................................................................................................................................................1911.0010010
.......................CC---ACCACCAC---AAGTCCT---GAGGA---------GG...........................................................................................................................................................................................................2411.0010010
....................ACTCC---ACCACCAC---AAGTCCT---GAGGA---------GG...........................................................................................................................................................................................................2711.0010010
.....................CTCC---ACCACCAC---AAGTCCT---...........................................................................................................................................................................................................................1911.0010010
..AGAAT-------CCGAGGACTCC---AC..............................................................................................................................................................................................................................................1811.0010010
.........................................GTCCT---GAGGA---------GGATGATAC....................................................................................................................................................................................................1911.0010010
..............CCGAGGACTCC---ACCACCAC---AAGT.................................................................................................................................................................................................................................2311.0010010
.......................CC---ACCACCAC---AAGTCCT---GAGGA---------GGAT.........................................................................................................................................................................................................2611.0010010
............................................CT---GAGGA---------GGATGATACTAC.................................................................................................................................................................................................1911.0010010
..........................................TCCT---GAGGA---------GGATGATACTA..................................................................................................................................................................................................2011.0010010
........................C---ACCACCAC---AAGTCCT---GAGGA---------GG...........................................................................................................................................................................................................2311.0010010
.......................CC---ACCACCAC---AAGTCCT---GAGGA---------G............................................................................................................................................................................................................2311.0010010
........................................AGTCCT---GAGGA---------GGATGATAC....................................................................................................................................................................................................2011.0010010
....................ACTCC---ACCACCAC---AAGTCCT---GAG........................................................................................................................................................................................................................2311.0010010
.AAGAAT-------CCGAGGACTCC---ACCACC..........................................................................................................................................................................................................................................2311.0010010
................................CCAC---AAGTCCT---GAGGA---------GG...........................................................................................................................................................................................................1811.0010010
..............................CACCAC---AAGTCCT---GAGGA---------GGATG........................................................................................................................................................................................................2311.0010010
.........................................GTCCT---GAGGA---------GGATGATACTACGTC..............................................................................................................................................................................................2511.0010010
........................C---ACCACCAC---AAGTCCT---GAGGA---------GGAT.........................................................................................................................................................................................................2511.0010010
....................................................GA---------GGATGATACTACGTCAGCACCT.......................................................................................................................................................................................2411.0010010
.........................................GTCCT---GAGGA---------GGATGATACTACGT...............................................................................................................................................................................................2411.0010010
............................ACCACCAC---AAGTCCT---GAGGA---------GGATG........................................................................................................................................................................................................2511.0010010
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGATA......................................................................................................................................2390.7870070
...................................................................................................................................................................CGAAGAGGAA---ACAA------------------------CCACCGAG........................................................2290.7870070
.................................................................ATGATACTACGTCAGCACCTG---GC.................................................................................................................................................................................23100.7070070
...............................................................................GCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................1990.6760060
..............................................................................AGCACCTG---GCGAAGATGA------------------------------T..........................................................................................................................................1990.5650050
...........................................................................................................................................................GA------CGAAGAGGAA---ACAA------------------------CCACCGAGG.......................................................2590.4440040
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------TGATA......................................................................................................................................2490.4440040
.............................................................................................AGATGA------------------------------TGATACTACCGT...............................................................................................................................18100.4040040
............................................................................................................................................................................A---ACAA------------------------CCACCGAGGACCCCG---------------------------AAG...................2380.3830030
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGAT.......................................................................................................................................2290.3330030
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGATACTACC.................................................................................................................................2890.3330030
...................................................................................................................................................................CGAAGAGGAA---ACAA------------------------CCACCGA.........................................................2190.3330030
.......................................................................................................................................TACCGTAGCTCCAGGAGG--.................................................................................................................1890.3330030
...................................................................................................................................ATACTACCGTAGCTCCAGGA.....................................................................................................................2090.3330030
......................................................................................................................................CTACCGTAGCTCCAGGAGG--.................................................................................................................1990.3330030
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------T..........................................................................................................................................2090.3330030
.............................................................................................................................................................................................................CACCGAGGACCCCG---------------------------AAGA-------AACCT......2380.2520020
.................................................................................................................................................................................CAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------AACCT......2780.2520020
..................................................................................................................................................................................AA------------------------CCACCGAGGACCCCG---------------------------AA....................1980.2520020
......................................................................................................................................................................................................................CCCCG---------------------------AAGA-------AACCTCTACA.1940.2510010
....................................................................................................................................................................................................................GACCCCG---------------------------AAGA-------AACCTCTAC..2040.2510010
.............................................................................................................................................................................................................CACCGAGGACCCCG---------------------------AAGA-------...........1880.2520020
...................................................................................................................................................................................................................GGACCCCG---------------------------AAGA-------AACCTCT....1940.2510010
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------...........................................................................................................................................1990.2220020
......................................................................................................................................................................AGAGGAA---ACAA------------------------CCACCGAGG.......................................................2090.2220020
..................................................................................................................................GATACTACCGTAGCTCCAG.......................................................................................................................1990.2220020
.....................................................................................................................................................................AAGAGGAA---ACAA------------------------CCACCGAGG.......................................................2190.2220020
....................................................................ATACTACGTCAGCACCTG---...................................................................................................................................................................................18100.2020020
................................................................GATGATACTACGTCAGCACCT.......................................................................................................................................................................................21100.2020020
...................................................................GATACTACGTCAGCACCTG---GC.................................................................................................................................................................................21100.2020020
...........................................................................................................................................................................AA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAG...................2480.1310010
............................................................................................................................................................................................................CCACCGAGGACCCCG---------------------------AAGA-------...........1980.1310010
............................................................................................................................................................................................................CCACCGAGGACCCCG---------------------------AAGA-------A..........2080.1310010
...................................................................................................................................................................................A------------------------CCACCGAGGACCCCG---------------------------AA....................1880.1310010
.................................................................................................................................................................................CAA------------------------CCACCGAGGACCCCG---------------------------AA....................2080.1310010
........................................................................................................................................................................AGGAA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAG...................2780.1310010
............................................................................................................................................................................A---ACAA------------------------CCACCGAGGACCCCG---------------------------AA....................2280.1310010
................................................................................................................................................................................ACAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------A..........2480.1310010
...................................................................................................................................................................................A------------------------CCACCGAGGACCCCG---------------------------AAG...................1980.1310010
................................................................................................................................................................................ACAA------------------------CCACCGAGGACCCCG---------------------------AAG...................2280.1310010
..................................................................................................................................................................................AA------------------------CCACCGAGGACCCCG---------------------------AAGA-------...........2180.1310010
............................................................................................................................................................................................................CCACCGAGGACCCCG---------------------------AAG...................1880.1310010
.................................................................................................................................................................................CAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------A..........2380.1310010
..................................................................................................................................................................................AA------------------------CCACCGAGGACCCCG---------------------------AAGA-------AACCT......2680.1310010
...........................................................................................................................................................................AA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------AA.........2780.1310010
.................................................................................................................................................................................CAA------------------------CCACCGAGGACCCCG---------------------------AAG...................2180.1310010
.....................................................................................................................................................................AAGAGGAA---ACAA------------------------CCACCGAG........................................................2090.1110010
...........................................................................GTCAGCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................2390.1110010
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------TGATACT....................................................................................................................................2690.1110010
................................................................................CACCTG---GCGAAGATGA------------------------------TGATA......................................................................................................................................2190.1110010
...............................................................................GCACCTG---GCGAAGATGA------------------------------TGATACTACC.................................................................................................................................2790.1110010
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGATACT....................................................................................................................................2590.1110010
...........................................................................GTCAGCACCTG---GCGAAGATG..........................................................................................................................................................................2090.1110010
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGATAC.....................................................................................................................................2490.1110010
...............................................................................GCACCTG---GCGAAGATGA------------------------------TGATA......................................................................................................................................2290.1110010
...........................................................................................................................................................GA------CGAAGAGGAA---ACAA------------------------CCACCG..........................................................2290.1110010
..........................................................................................CGAAGATGA------------------------------TGATACTACCGT...............................................................................................................................2190.1110010
..............................................................................AGCACCTG---GCGAAGATGA------------------------------...........................................................................................................................................1890.1110010
................................................................................CACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................1890.1110010
.....................................................................................G---GCGAAGATGA------------------------------TGATACTACC.................................................................................................................................2190.1110010
..................................................................................................................................GATACTACCGTAGCTCCA........................................................................................................................1890.1110010
....................................................................................TG---GCGAAGATGA------------------------------TGATACTACCGT...............................................................................................................................2490.1110010
...............................................................................GCACCTG---GCGAAGATGA------------------------------T..........................................................................................................................................1890.1110010
....................................................................................................................................TACTACCGTAGCTCCAGG......................................................................................................................1890.1110010
...............................................................................GCACCTG---GCGAAGATGA------------------------------TGA........................................................................................................................................2090.1110010
....................................................................................................................................TACTACCGTAGCTCCAGGA.....................................................................................................................1990.1110010
.....................................................................................................................................ACTACCGTAGCTCCAGGAGG--.................................................................................................................2090.1110010
...................................................................................................................................................................CGAAGAGGAA---ACAA------------------------CCACCG..........................................................2090.1110010
................................................................................CACCTG---GCGAAGATGA------------------------------TGATACTACC.................................................................................................................................2690.1110010
...........................................................................................GAAGATGA------------------------------TGATACTACCGTAGCTCC.........................................................................................................................2690.1110010
................................................................................CACCTG---GCGAAGATGA------------------------------TGATACTAC..................................................................................................................................2590.1110010
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------TGA........................................................................................................................................2290.1110010
...................................................................................................................................................................CGAAGAGGAA---ACAA------------------------CCACCGAGGA......................................................2490.1110010
...........................................................................................................................................................GA------CGAAGAGGAA---ACAA------------------------CCACCGA.........................................................2390.1110010
....................................................................ATACTACGTCAGCACCTG---GCGAAGATG..........................................................................................................................................................................2790.1110010
...............................................................................GCACCTG---GCGAAGATGA------------------------------TGATACT....................................................................................................................................2490.1110010
...................................................................................CTG---GCGAAGATGA------------------------------TGATACTACCGT...............................................................................................................................2590.1110010
.................................................................ATGATACTACGTCAGCACCT.......................................................................................................................................................................................20100.1010010
..................................................................TGATACTACGTCAGCACCT.......................................................................................................................................................................................19100.1010010
...........................................................................................................................................................GA------CGAAGAGGAA---ACAA------------------------CCA.............................................................19100.1010010
...........................................................................................................................................................GA------CGAAGAGGAA---ACAA------------------------CC..............................................................18100.1010010
.................................................................ATGATACTACGTCAGCACCTG---GCGAAG.............................................................................................................................................................................27100.1010010
...................................................................GATACTACGTCAGCACCT.......................................................................................................................................................................................18100.1010010
......................................................................ACTACGTCAGCACCTG---GC.................................................................................................................................................................................18100.1010010
droSim2
AAAGAAT-------CCGAGGAGTCC---ACCACGAC---AAGTCCT---GAAGA---------TGATGATACTACGTCAGCACCTG---GCGAAGATGA------------------------------TGATACTACCGTAGCTCCAGGAGGT-GA------CGAAGAGGAA---ACAA------------------------CCACCGAGAACCCCG---------------------------AAGA-------AACCTCTACATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................ATACTACGTCAGCACCTG---...................................................................................................................................................................................1851.20600600000000000000
.................................................................................................................................................................................CAA------------------------CCACCGAGAACCCCG---------------------------AAG...................2111.00100010000000000000
.......................................................................................................................................TACCGTAGCTCCAGGAGGT-GA------CGA......................................................................................................2430.67200020000000000000
...................................................................GATACTACGTCAGCACCTG---...................................................................................................................................................................................1950.60301200000000000000
...........................................................................................................................................................GA------CGAAGAGGAA---ACAA------------------------CCACCGAG........................................................2440.50200200000000000000
...........................................................................................GAAGATGA------------------------------TGATACTACC.................................................................................................................................1850.40200200000000000000
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................2050.40200000000000200000
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGA........................................................................................................................................2150.40200010000000100000
..................................................................................................A------------------------------TGATACTACCGTAGCTCCAGGA.....................................................................................................................2330.33100000000000100000
................................................................................................TGA------------------------------TGATACTACCGTAGCTCCAGGAGGT-.................................................................................................................2830.33100010000000000000
..................................................................................................................................GATACTACCGTAGCTCCAGG......................................................................................................................2030.33100010000000000000
...........................................................................................................................................GTAGCTCCAGGAGGT-GA------CGAAGA...................................................................................................2330.33100010000000000000
....................................................................................................................................TACTACCGTAGCTCCAGGA.....................................................................................................................1930.33100000000000100000
...................................................AGA---------TGATGATACTACGTC..............................................................................................................................................................................................1840.25100010000000000000
...............................................................................................ATGA------------------------------TGATACTACCGTAGCTC..........................................................................................................................2140.25101000000000000000
......................TCC---ACCACGAC---AAGTCCT---GAA........................................................................................................................................................................................................................2140.25100010000000000000
............................................................................................AAGATGA------------------------------TGATACTACCGT...............................................................................................................................1940.25100010000000000000
...................................................................................................................................................AGGAGGT-GA------CGAAGAGGAA---ACAA------------------------CCACC...........................................................2840.25100010000000000000
.............................................................................................................................................AGCTCCAGGAGGT-GA------CGAAGAGGAA---A...........................................................................................2640.25100010000000000000
.......................CC---ACCACGAC---AAGTCCT---GAAGA---------T............................................................................................................................................................................................................2340.25100000000000100000
.............................................................................................AGATGA------------------------------TGATACTACCGTAGCTC..........................................................................................................................2340.25100100000000000000
..................GGAGTCC---ACCACGAC---AAGTCCT---GAAGA---------T............................................................................................................................................................................................................2840.25100010000000000000
.....................................................................................................................................................GAGGT-GA------CGAAGAGGAA---A...........................................................................................1840.25100000000000100000
..............................................................................................................................................GCTCCAGGAGGT-GA------CGAAGA...................................................................................................2040.25100010000000000000
.................................................................................................................................TGATACTACCGTAGCTCCAG.......................................................................................................................2040.25100010000000000000
...........................................................................................GAAGATGA------------------------------TGATACTACCGT...............................................................................................................................2040.25100010000000000000
................................CGAC---AAGTCCT---GAAGA---------TG...........................................................................................................................................................................................................1840.25100100000000000000
.......................CC---ACCACGAC---AAGTCCT---G..........................................................................................................................................................................................................................1840.25100100000000000000
.......................................AAGTCCT---GAAGA---------TGATGATACTA..................................................................................................................................................................................................2340.25100010000000000000
..............................CACGAC---AAGTCCT---GAAGA---------TGAT.........................................................................................................................................................................................................2240.25100100000000000000
.............................CCACGAC---AAGTCCT---GAAGA---------T............................................................................................................................................................................................................2040.25100010000000000000
......................TCC---ACCACGAC---AAGTCCT---GAAGA---------TG...........................................................................................................................................................................................................2540.25100010000000000000
...................................................................................................................................................................CGAAGAGGAA---ACAA------------------------CCACCGAG........................................................2240.25100010000000000000
...............................................................TGATGATACTACGTCAGCACCTG---GC.................................................................................................................................................................................2550.20100010000000000000
.................................................................................ACCTG---GCGAAGATGA------------------------------TGATAC.....................................................................................................................................2150.20100010000000000000
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGATACT....................................................................................................................................2550.20100010000000000000
....................................................................ATACTACGTCAGCACCTG---GCGAAGATGA------------------------------...........................................................................................................................................2850.20100010000000000000
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGAT.......................................................................................................................................2250.20100010000000000000
.............................................................................CAGCACCTG---GCGAAGATG..........................................................................................................................................................................1850.20100010000000000000
...................................................................GATACTACGTCAGCACCTG---GCGAA..............................................................................................................................................................................2450.20100010000000000000
................................................................GATGATACTACGTCAGCACCTG---GCGA...............................................................................................................................................................................2650.20100010000000000000
...............................................................................GCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................1950.20100000000000100000
.................................................................ATGATACTACGTCAGCACCTG---...................................................................................................................................................................................2150.20100100000000000000
....................................................................ATACTACGTCAGCACCTG---GC.................................................................................................................................................................................2050.20100000000000100000
dm3
AAGGAAT-------CCGAGGAGTCC---ACCACTTC---AAGTCCT---GAAGA---------TGATGATACTACGTCAGCACCTG---GCGAAGATGA------------------------------TGATACTACCGCAGCTCCAGGAGGT-GA------CGAAGAGGAA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------GACCACTACATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................CTCCAGGAGGT-GA------CGAAGA...................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CCAGGAGGT-GA------CGAAGAG..................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.....................................................................................G---GCGAAGATGA------------------------------TGATACTACC.................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAA------------------------CCACCGAGGACCCCG---------------------------A.....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATACTACGTCAGCACCTG---GC.................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
...................................................................................................................................................................................A------------------------CCACCGAGGACCCCG---------------------------AAGA-------GAC........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------...........................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGAT.......................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CACCGAGGACCCCG---------------------------AAGA-------GAC........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AT-------CCGAGGAGTCC---ACCACTT.........................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CCAGGAGGT-GA------CGAAGAGGA................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................TGATACTACCGCAGCTCCAGGAGGT-.................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TGATA......................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................C---AAGTCCT---GAAGA---------TGATG........................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GACCCCG---------------------------AAGA-------GACCACTACAT2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGATACTACGTCAGCACCTG---GC.................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCGAGGAGTCC---ACCACTT.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GAAGATGA------------------------------TGATACTACCGC...............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CCCCG---------------------------AAGA-------GACCACTACA.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACCGCAGCTCCAGGAGGT-GA------.........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GA------CGAAGAGGAA---ACAA------------------------CCACCGAG........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AGA---------TGATGATACTACGTC..............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------T..........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAA------------------------CCACCGAGGACCCCG---------------------------AAG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TACTACCGCAGCTCCAGGAGGT-.................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CC---ACCACTTC---AAGTCCT---GAAGA---------TG...........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TACCGCAGCTCCAGGAGGT-GA------.........................................................................................................2111.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AGCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GCTCCAGGAGGT-GA------CGAAGA...................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................C---AAGTCCT---GAAGA---------TGAT.........................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CT---GAAGA---------TGATGATACTACGT...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................AGCTCCAGGAGGT-GA------CGAAGAGGAA---............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AGGT-GA------CGAAGAGGAA---ACAA------------------------C...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GATGATACTACGTCAGCACCTG---GC.................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AAGA---------TGATGATACTACGT...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGAA---ACAA------------------------CCACCGAGGACCCCG---------------------------AAGA-------...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AA------------------------CCACCGAGGACCCCG---------------------------AAGA-------GACCA......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CCAGGAGGT-GA------CGAAGAGGAA---ACAA------------------------................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GGAGGT-GA------CGAAGAGGAA---............................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................A------------------------CCACCGAGGACCCCG---------------------------AAGA-------GACCA......2511.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TCCAGGAGGT-GA------CGAAGAG..................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................ACTACGTCAGCACCTG---GCGA...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................G---GCGAAGATGA------------------------------TGATACTACCGCAG.............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GATGATACTACGTCAGCACCTG---...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CCACCGAGGACCCCG---------------------------AAG...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CGCAGCTCCAGGAGGT-GA------C........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GGAGGT-GA------CGAAGAGGAA---AC..........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-------CCGAGGAGTCC---ACCACTTC---AA...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CAGCACCTG---GCGAAGATGA------------------------------TG.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AGAGGAA---ACAA------------------------CCACCGA.........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AGGAGGT-GA------CGAAGAGGAA---AC..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GA------------------------------TGATACTACCGCAGCTCCAGGA.....................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CACTTC---AAGTCCT---GAAGA---------T............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGAAT-------CCGAGGAGTCC---AC..............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GAAGATGA------------------------------TGATACTACC.................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CT---GAAGA---------TGATGATACTACGTC..............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CACCGAGGACCCCG---------------------------AAGA-------...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GCTCCAGGAGGT-GA------CGAAG....................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAGGAGTCC---ACCACTTC---AAGTCCT---GAA........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GTCCT---GAAGA---------TGATGATACTA..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................C---AAGTCCT---GAAGA---------TGATGATA.....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGGAAT-------CCGAGGAGTCC---................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATGGAAC--------CGAGGACTCG---ACCACCGC---AGCTCCT---GAAGA---------GACTACAACGACCGAGAAACCCG------AAGAACCTTC---------------------------CACTACAACCGAAGAACCCGAGGAG----------------------TCCACTACTGAAGTTTCCGAGGAGTCTACAACAGAAGAGCCCG---------------------------AAAA-------CAATCCTACATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................C---------------------------CACTACAACCGAAGAACCCGAGGA...................................................................................................................2514.0040301000
..............................CACCGC---AGCTCCT---GAAGA---------GA...........................................................................................................................................................................................................2013.0030003000
.......................................AGCTCCT---GAAGA---------GACTACAACGACCGA..............................................................................................................................................................................................2711.0010100000
.........................................................................................................................................................................................................CTACAACAGAAGAGCCCG---------------------------AAAA-------CAAT.......2611.0010001000
.................................................................................................................................................................................CCACTACTGAAGTTTCCGAGGA.....................................................................2211.0011000000
.........................................................................................................................................................................................................CTACAACAGAAGAGCCCG---------------------------AAAA-------CAATC......2711.0010001000
.....................................................................................................................................ACAACCGAAGAACCCGAG.....................................................................................................................1811.0010001000
......................................................................................................................................................................................ACTGAAGTTTCCGAGGAGTCT.................................................................2111.0010100000
........................................GCTCCT---GAAGA---------GACTACAACGACC................................................................................................................................................................................................2411.0010100000
...........................................................................................................................................GAAGAACCCGAGGAG----------------------TCCAC.......................................................................................2011.0010001000
.........................................................................................................................................................................................................CTACAACAGAAGAGCCCG---------------------------AAA...................2111.0010001000
.............................................................................................AGAACCTTC---------------------------CACTACAACCGAA..............................................................................................................................2211.0010100000
....AAC--------CGAGGACTCG---ACCACCGC---.....................................................................................................................................................................................................................................2131.0030201000
.........................................................................................................................................................G----------------------TCCACTACTGAAGTTTCCGAGGAGT...................................................................2611.0010100000
........................G---ACCACCGC---AGCTCCT---GAAGA---------GACTAC.......................................................................................................................................................................................................2711.0010100000
.......................................AGCTCCT---GAAGA---------GACTACAACGAC.................................................................................................................................................................................................2411.0010100000
..............................CACCGC---AGCTCCT---GAAGA---------GACT.........................................................................................................................................................................................................2211.0010100000
.................................................................................................................................CACTACAACCGAAGAACCCGAGGA...................................................................................................................2411.0010001000
..............................................................................GAAACCCG------AAGAACCTTC---------------------------CA.........................................................................................................................................2011.0010001000
........................................................................GACCGAGAAACCCG------AAGAACC.........................................................................................................................................................................2111.0010100000
..............................CACCGC---AGCTCCT---GAAGA---------GACTACAAC....................................................................................................................................................................................................2711.0010001000
.................................................................................................................................................................................CCACTACTGAAGTTTCCGAGGAGT...................................................................2411.0010001000
....................................................................................................................................................................................CTACTGAAGTTTCCGAGGAGT...................................................................2111.0010001000
.......................CG---ACCACCGC---AGCTCCT---GAAGA---------.............................................................................................................................................................................................................2231.0030300000
.................................................................................................................................CACTACAACCGAAGAACCCGAGG....................................................................................................................2311.0010001000
.......................................AGCTCCT---GAAGA---------GACTACAACGACC................................................................................................................................................................................................2511.0010100000
...........................................CCT---GAAGA---------GACTACAACGACC................................................................................................................................................................................................2111.0010001000
.................................................................................................................................................................................CCACTACTGAAGTTTCCGAGGAGTC..................................................................2511.0010100000
.........................................................................................................................................................................................................CTACAACAGAAGAGCCCG---------------------------A.....................1911.0010100000
..............................................................................................................................................GAACCCGAGGAG----------------------TCCACTAC....................................................................................2011.0010001000
.....................................................................................................C---------------------------CACTACAACCGAAGAACCCGA......................................................................................................................2211.0010100000
............................................................................................................................................................................................GTTTCCGAGGAGTCTACAACAGAAG.......................................................2511.0010001000
...............................................................................................AACCTTC---------------------------CACTACAACCGAA..............................................................................................................................2011.0010100000
........................................GCTCCT---GAAGA---------GACTACAACGACCGA..............................................................................................................................................................................................2611.0010100000
.......................................................................................................................................................................................................GTCTACAACAGAAGAGCCCG---------------------------AA....................2211.0010100000
.....AC--------CGAGGACTCG---ACCACCGC---AGC..................................................................................................................................................................................................................................2330.6720200000
...GAAC--------CGAGGACTCG---ACCACC..........................................................................................................................................................................................................................................2030.3310100000
..............................CACCGC---AGCTCCT---GAAGA---------.............................................................................................................................................................................................................1830.3310001000
......C--------CGAGGACTCG---ACCACCGC---AGCT.................................................................................................................................................................................................................................2330.3310100000
..GGAAC--------CGAGGACTCG---ACCACC..........................................................................................................................................................................................................................................2130.3310100000
........................G---ACCACCGC---AGCTCCT---GAAGA---------.............................................................................................................................................................................................................2130.3310100000
....AAC--------CGAGGACTCG---ACCACCGC---AGC..................................................................................................................................................................................................................................2430.3310100000
....AAC--------CGAGGACTCG---ACCACC..........................................................................................................................................................................................................................................1930.3310100000
...GAAC--------CGAGGACTCG---ACCAC...........................................................................................................................................................................................................................................1930.3310001000
...GAAC--------CGAGGACTCG---ACCACCGC---.....................................................................................................................................................................................................................................2230.3310001000
droYak3
AAGGAAT-------CCGAGGAGTCG---ACCACTAC---AACCCCT---GAAGA---------TAATAATACTACGTCTGCTCCTG---------------------------GAGACGGCGAAGACGATGACACTACCCCAGCTCCCGGAGAC-GG------CGAAGAGGAA---TCAA------------------------CCACAGAGGACCCCG---------------------------AAGA-------AAACTCCACTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................GAA---TCAA------------------------CCACAGAGGACCCCG---------------------------A.....................2312.00201100000000
...................................................................................................................................................................................................................GGACCCCG---------------------------AAGA-------AAACTC.....1812.00200200000000
.................................................................................................................................................................................CAA------------------------CCACAGAGGACCCCG---------------------------AA....................2012.00201000010000
.......................CG---ACCACTAC---AACCCCT---GAAGA---------T............................................................................................................................................................................................................2312.00202000000000
...................................................................................................................................ACACTACCCCAGCTCCCGGAGAC-GG------C........................................................................................................2612.00201000010000
.................................................................ATAATACTACGTCTGCTCCTG---------------------------...........................................................................................................................................................2111.00100010000000
.......................CG---ACCACTAC---AACCCCT---GA.........................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................AGAC-GG------CGAAGAGGAA---TC..........................................................................................1811.00100100000000
................................................................................................................................................................................................................AGAGGACCCCG---------------------------AAGA-------AAACTCCAC..2411.00100100000000
..............................................................................TGCTCCTG---------------------------GAGACGGCGAAGACGAT..........................................................................................................................................2511.00101000000000
.........................................................................ACGTCTGCTCCTG---------------------------GAGACGGC...................................................................................................................................................2111.00100100000000
........................G---ACCACTAC---AACCCCT---GAAGA---------TA...........................................................................................................................................................................................................2311.00100100000000
.............................CCACTAC---AACCCCT---GAAGA---------TA...........................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................GACACTACCCCAGCTCCCGG......................................................................................................................2011.00101000000000
.......................CG---ACCACTAC---AACCCCT---GAAG.......................................................................................................................................................................................................................2111.00101000000000
................................................................................CTCCTG---------------------------GAGACGGCGAAGACGAT..........................................................................................................................................2311.00101000000000
........................G---ACCACTAC---AACCCCT---GAAGA---------T............................................................................................................................................................................................................2211.00101000000000
...............................................................................................................................................CTCCCGGAGAC-GG------CGAAGAGGA................................................................................................2211.00100000010000
...................................................................................................................................................................................................................GGACCCCG---------------------------AAGA-------AAACTCCA...2011.00101000000000
..................................................................................CCTG---------------------------GAGACGGCGAAGACG............................................................................................................................................1911.00101000000000
.....................GTCG---ACCACTAC---AACCCCT---GA.........................................................................................................................................................................................................................2111.00101000000000
.................................................................ATAATACTACGTCTGCTCCTG---------------------------GA.........................................................................................................................................................2311.00101000000000
........................................................................................................................................ACCCCAGCTCCCGGAGAC-GG------C........................................................................................................2111.00100000010000
.................................................................ATAATACTACGTCTGCTCCTG---------------------------G..........................................................................................................................................................2211.00101000000000
....................AGTCG---ACCACTAC---AACCCCT---GAAGA---------T............................................................................................................................................................................................................2611.00100100000000
...................................................................AATACTACGTCTGCTCCTG---------------------------GAGAC......................................................................................................................................................2411.00100100000000
...................................................................................................................................................CGGAGAC-GG------CGAAGAGGAA---TCAA------------------------CC..............................................................2511.00100000010000
.................................................................................................................................................................................CAA------------------------CCACAGAGGACCCCG---------------------------AAG...................2111.00101000000000
...................................................................................................................................ACACTACCCCAGCTCCCGGA.....................................................................................................................2011.00101000000000
.....AT-------CCGAGGAGTCG---ACCACTAC---A....................................................................................................................................................................................................................................2211.00101000000000
.......................................................................CTACGTCTGCTCCTG---------------------------GAGA.......................................................................................................................................................1911.00101000000000
....................................................................ATACTACGTCTGCTCCTG---------------------------GA.........................................................................................................................................................2011.00101000000000
...........................................................................................................................................CCAGCTCCCGGAGAC-GG------CGAAGAGGAA---T...........................................................................................2811.00100100000000
....................................................................ATACTACGTCTGCTCCTG---------------------------GAGAC......................................................................................................................................................2311.00101000000000
....................................................................................................................................CACTACCCCAGCTCCCGGAGAC-GG------C........................................................................................................2511.00100000010000
.................................................................ATAATACTACGTCTGCTCC........................................................................................................................................................................................1911.00100010000000
..............................................................................................................................CGATGACACTACCCCAGCTCCCGGA.....................................................................................................................2511.00101000000000
....................................................................................................................................CACTACCCCAGCTCCCGGAGAC-GG------CGA......................................................................................................2711.00100010000000
...................................................................................................................................ACACTACCCCAGCTCCCGGAGAC-GG------.........................................................................................................2511.00101000000000
.......................CG---ACCACTAC---AACCCCT---GAAGA---------TAATA........................................................................................................................................................................................................2711.00101000000000
...........................................................................................................................AGACGATGACACTACCCCAGCTCCCG.......................................................................................................................2611.00101000000000
...................................................................................................................GACGGCGAAGACGATGACACTACC.................................................................................................................................2411.00110000000000
.......................................................................CTACGTCTGCTCCTG---------------------------GAGACGG....................................................................................................................................................2211.00101000000000
...........................................................................................................................................................................AA---TCAA------------------------CCACAGAGGACCCCG---------------------------AAG...................2411.00101000000000
.....................GTCG---ACCACTAC---AACCCCT---GAG........................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................TCCCGGAGAC-GG------CGAAGAGGA................................................................................................2111.00101000000000
................................CTAC---AACCCCT---GAAGA---------TAATAATACTACGT...............................................................................................................................................................................................3011.00100000010000
............................................................................................................................................................G------CGAAGAGGAA---TCAA------------------------CCACAGAGGACC....................................................2711.00100000010000
.......................................................................................................................................TACCCCAGCTCCCGGAGAC-GG------C........................................................................................................2211.00100000010000
...............................................................................................................................GATGACACTACCCCAGCTCCCGGA.....................................................................................................................2411.00101000000000
.................................................................................................................................................................................CAA------------------------CCACAGAGGACCCCG---------------------------A.....................1911.00100100000000
................................................................AATAATACTACGTCTGCTCCTG---------------------------G..........................................................................................................................................................2311.00100100000000
...............................................................................................................................................CTCCCGGAGAC-GG------CGAAGAGG.................................................................................................2111.00100100000000
droEug1
AGAGGATGGAGGAGATGACGATACC---ACCACCGC---TGCTCCA---GAGGATGGAGGAGATGATGATACCACCACGGCTG------------------------CTCCAGAAGATGGAGGAGATGATGATACTACCGCTGCTCCAGAGGAT-GG------AGGAGATGAT---GATA------------------------CCACC------------------------ACCGCTGCTCCAGAGGATGGAGGAGATGATGATACSizeHit CountTotal NormTotal
No Reads
droBia1
GAGGAAT----------------CG---ACCACCGA---TGAACCA---GAAG---------------AAACCACCACTGCTCCAG------AGGA---------------------------------ATCGACAACCAATGAACCAGAAGAGA-------------------------CGACCGCTGCTCCAGAGGAATCGACCACCGATGAACCAG---------------------------AAGA-------GACGACTGC--SizeHit CountTotal NormTotal
No Reads
droTak1
GAAGAAC-------CCGAGAAGGAC---ACTACAAC---TACCCA---------------------------------AAAACCTG------AAGAGCCGTC---------------------------GTCTACAACTGAGGAACCAGAAGAGA-------------------------CGACTGCCGCTCCAGAGGATTCGACCACCCAGGAACCAG---------------------------AAGA-------GACTTCTGT--SizeHit CountTotal NormTotal
No Reads
droEle1
AAACAAC-------CAGAAGAGTCA---TCTACTACTGAAGAACCC---GAGGA---------G---TCTACAACCGAAGAACCCG------AAGAAGTTTC---------------------------TACAACAACCAAAAAACCAGAAGAG-TCCGAGCCCGAGGAAGTATCTACGA------------------------CAACCGAAGCACCCG---------------------------AAGA-------AGTCTCTA---SizeHit CountTotal NormTotal
No Reads
droRho1
AAAGAAC-------CCGAGGAGTCA---ACTACAGC---TGACCCA---GAAGA---------G---TCAACAACCGACGAACCCG------AAGAAGTCTC---------------------------TACAACAACCAGAAAGCCT----------------GAAGAACCA---TCTA------------------------CAACTGTAGAACCCG---------------------------AAGA-------GTCGACTACAGSizeHit CountTotal NormTotal
No Reads
droFic1
GAAGAAC-------CAGAAGAGGAC---TCTACTAC------------------------------------ACCCGAAGAACCAG------AAGAGGACTCTACTACACCCGAAGTACCAGAAGATGATGATACCACCGCTGCTCCAGAGGAT-GA------TATAGAAGAA---TCGA------------------------CAACCGAGAAACCAG---------------------------AAGA-------TGACTCTA---SizeHit CountTotal NormTotal
No Reads
droKik1
ACTGAAA-------T------TCCATCGACCACGGC---TAAACCTACTGAGTT---------G---CCGACAGCTACGACTCCCG---------------------------GAGAT---GGAGAGGATGACACTACTTCAGCCCCT----------------GAGGATGTT---TCTA------------------------CCACCGAAGAACCCG---------------------------AAGA-------GATTTCTACCASizeHit CountTotal NormTotal
No Reads
droAna3
ATCGTAC-------CAGAGACTCCA---ACTGTCACTACAACCACT---GAGGA---------G---CCCACCA---------------------------------------------------------CCACCACCATCGTACCAGCGACT-CC------AACTGTCACC---ACAA------------------------CCACTGAGGAGCCCA---------------------------CCAC-------GACCACCAT--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................GTACCAGCGACT-CC------AACTGT...................................................................................................2012.002020000
......................................................................ACCA---------------------------------------------------------CCACCACCATCGTACCAGCGACT-C................................................................................................................2811.001010000
...............................GTCACTACAACCACT---GAGGA---------G---CC.......................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................ACTGAGGAGCCCA---------------------------CCAC-------GAC........2011.001010000
ATCGTAC-------CAGAGACTCCA---ACTGTCA.........................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................C------AACTGTCACC---ACAA------------------------CCACTGAGGA......................................................2520.501010000
..........................................................................................................................................................................ACC---ACAA------------------------CCACTGAGGAGCCC..................................................2120.501010000
....................................................................................................................................................................ACTGTCACC---ACAA------------------------CCACTGAGG.......................................................2220.501100000
.......................................................................................................................................................................GTCACC---ACAA------------------------CCACTGAGGAGCCCA---------------------------CC....................2720.501010000
.......................................................................................................................................................................GTCACC---ACAA------------------------CCACTGAGGAGCC...................................................2320.501010000
...................................................GGA---------G---CCCACCA---------------------------------------------------------CCACCACC.................................................................................................................................1920.501100000
.......................................AACCACT---GAGGA---------G---CCCACCA---------------------------------------------------------CC.......................................................................................................................................2230.331010000
..................................................................................................................................................................................AA------------------------CCACTGAGGAGCCCA---------------------------CC....................1940.251100000
...........................................ACT---GAGGA---------G---CCCACCA---------------------------------------------------------CCA......................................................................................................................................1940.251100000
.......................................AACCACT---GAGGA---------G---CCCACC...................................................................................................................................................................................................1940.251100000
..........................................CACT---GAGGA---------G---CCCACCA---------------------------------------------------------CC.......................................................................................................................................1940.251100000
droBip1
GAGGCTT-------CA------------------------AGTGGT---GAAG---------------AAACTACTGCTGCGCCAG------GAGGTGAGGAGA---CTACAGAAGGTTCAGGAGGAGAGGAGACCACTGCTTCTCCT-------------------------------------------------------------GGAG---GAG---------------------------AAGA-------AACAACAGCTASizeHit CountTotal NormTotal
No Reads
dp5
GATGGAG-------AAGATGATTCG---ACCACTGC---TGCACCT---GAAGA---------AGGTTCCACCACTCCAGCACCTGGTGGCGAAGATGA------------------------------TTCTACCACAGCTGCACCTGAAGAT-GG------AGGTGATGAC---TCTA------------------------CAACTGCTGCCCCAG---------------------------AAGA------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................GAAGATGA------------------------------TTCTACCACAGCTGC............................................................................................................................2311.0010000100000
.............................................................................CAGCACCTGGTGGCGAAGATGA------------------------------TT.........................................................................................................................................2411.0010100000000
......................................................................................................................................................................TGATGAC---TCTA------------------------CAACTGCTGCCCC...................................................2411.0010100000000
....................ATTCG---ACCACTGC---TGCACCT---GAAGA---------.............................................................................................................................................................................................................2511.0010100000000
....................................................................CCACCACTCCAGCACCTGGT....................................................................................................................................................................................2011.0010000100000
.................................................................................................................................................................................CTA------------------------CAACTGCTGCCCCAG---------------------------A.....................1911.0010100000000
..........................................................................................................................................AGCTGCACCTGAAGAT-GG------AGGT.....................................................................................................2211.0010100000000
................................................................................CACCTGGTGGCGAAGATGA------------------------------...........................................................................................................................................1911.0010000100000
.......................................................................................................................................................................GATGAC---TCTA------------------------CAACTGCTGC......................................................2011.0010000000001
..............................................................................................................................................GCACCTGAAGAT-GG------AGGTGATGAC---T...........................................................................................2511.0010010000000
.............................CCACTGC---TGCACCT---GAAGA---------AGGTTCCAC....................................................................................................................................................................................................2811.0010010000000
....................................................................................................................................................GAAGAT-GG------AGGTGATGAC---TC..........................................................................................2040.2510010000000
droPer2
GATGGAG-------AAGATGATTCG---ACCACTGC---TGCACCT---GAAGA---------AGGTTCCACCACTCCAGCACCTGGTGGCGAAGATGA------------------------------TTCTACCACAGCTGCACCTGAAGAT-GG------AGGTGATGAC---TCTA------------------------CAACTGCTGCCCCAGAAGATGGAGGCGATG------------ATTC-------TACCACCGCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......G-------AAGATGATTCG---ACCACTGC---T....................................................................................................................................................................................................................................2113.003300000
..............AAGATGATTCG---ACCACTGC---T....................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................GATGAC---TCTA------------------------CAACTGCTGCCCC...................................................2311.001100000
......G-------AAGATGATTCG---ACCACTGC---G....................................................................................................................................................................................................................................2111.001100000
..............AAGATGATTCG---ACCACTGC---TGCACCT---GG.........................................................................................................................................................................................................................2811.001100000
.....................................................A---------AGGTTCCACCACTCCAGCACCTGGT....................................................................................................................................................................................2611.001001000
.......................................................................................................................................................................GATGAC---TCTA------------------------CAACTGCTGC......................................................2011.001100000
........................................................................................GGCGAAGATGA------------------------------TTCTACCACAGCT..............................................................................................................................2411.001010000
..............AAGATGATTCG---ACCACTGC---TGCACCT---GA.........................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................CACCTGAAGAT-GG------AGGTGATGAC---T...........................................................................................2411.001000001
....................................................................................................................................................GAAGAT-GG------AGGTGATGAC---TC..........................................................................................2050.603300000
........................G---ACCACTGC---TGCACCT---GG.........................................................................................................................................................................................................................1820.501100000
......................................................................................................................................................AGAT-GG------AGGTGATGAC---TC..........................................................................................1850.201100000
....................................................................................................................................................GAAGAT-GG------AGGTGATGAC---T...........................................................................................1950.201000001
....................................................................................................................................................GAAGAT-GG------AGGTGATGAC---............................................................................................1850.201000001
droWil2
GAAGACA-------ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------CAACGAAACAACCGCTGCTCCTG------AAGACAACGAGA---CCACCGATGCTCCCGAGGACAACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------AAACAACCGCTGCTCCGGAAGA-------CAACG---AAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..AGACA-------ACGAGA---------CAACCGC---T....................................................................................................................................................................................................................................1951.20601050
...........................................................................................................CCACCGATGCTCCCGAGGACA............................................................................................................................................2111.00100010
................................................................................................CAACGAGA---CCACCGATGC.......................................................................................................................................................1811.00100010
.......................................................................................................................................................................................................................AACG---------AAACAACCGCTGCTCCGGA.....................2341.00400130
..................................................................................CCTG------AAGACAACGAGA---CCACCGAT.........................................................................................................................................................2411.00100010
.....................................................................................................AGA---CCACCGATGCTCCCGAGGACA............................................................................................................................................2411.00100010
......................................................................................................GA---CCACCGATGCTCCCGAGGACA............................................................................................................................................2311.00100010
.................................................................................................AACGAGA---CCACCGATGCTCCCGAGG...............................................................................................................................................2511.00100010
...........................................................................................................CCACCGATGCTCCCGAGGAC.............................................................................................................................................2011.00100010
................................................................AACGAAACAACCGCTGCTCCT.......................................................................................................................................................................................2150.80400040
........................................................................................................................................................................................................................ACG---------AAACAACCGCTGCTCCGGA.....................2240.75301020
..............ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------.............................................................................................................................................................................................................25110.64700070
................................................................................................................................ACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGA......................................................25110.64700070
..AGACA-------ACGAGA---------CAACCGC---.....................................................................................................................................................................................................................................1850.60300030
................................................................AACGAAACAACCGCTGCTCCTG------AAGAC...........................................................................................................................................................................2750.60300120
...................................................................GAAACAACCGCTGCTCCTG------AAGACAAC........................................................................................................................................................................2750.60301110
.....................................................................AACAACCGCTGCTCCTG------A...............................................................................................................................................................................1850.60300030
..........................................................................................................................................................................................................................G---------AAACAACCGCTGCTCCGGAAGA-------C..........2440.50201010
.............................CAACCGC---TGCTCCC---GAGGA---------C............................................................................................................................................................................................................20130.46600060
......................................................................................................................................CAACCGCTGCTCCC-------------------------------------------------------------GAGGAC.....................................................20130.46600060
..................GA---------CAACCGC---TGCTCCC---GAGGA---------.............................................................................................................................................................................................................21110.45500050
....................................................................................................................................GACAACCGCTGCTCCC-------------------------------------------------------------GAGGA......................................................21110.45500050
....................................................................................................................................GACAACCGCTGCTCCC-------------------------------------------------------------GA.........................................................18110.45500050
..................GA---------CAACCGC---TGCTCCC---GA.........................................................................................................................................................................................................................18110.45500050
.....................................................................................................................................................................................................................................AACAACCGCTGCTCCGGA.....................1870.43300030
.....................................................................................................................................................................................................................................AACAACCGCTGCTCCGGAA....................1970.43300030
.....................................................................AACAACCGCTGCTCCTG------AAGACAACGA......................................................................................................................................................................2750.40200020
.................................................................ACGAAACAACCGCTGCTCCTG------AA..............................................................................................................................................................................2350.40200020
.....................................................................AACAACCGCTGCTCCTG------AA..............................................................................................................................................................................1950.40200020
....................................................................AAACAACCGCTGCTCCTG------AA..............................................................................................................................................................................2050.40200020
................................................................AACGAAACAACCGCTGCTCCTG------A...............................................................................................................................................................................2350.40200020
.......................................................................................................................................................................................................................................CAACCGCTGCTCCGGAAGA-------...........1980.38300120
................................................................................................................................ACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGAC.....................................................26110.36420020
..............ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------CA...........................................................................................................................................................................................................27110.36400130
................................................................................................................................ACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACA....................................................27110.36400130
..............ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------C............................................................................................................................................................................................................26110.36420020
.............................................................................................................ACCGATGCTCCCGAGGAC.............................................................................................................................................1830.33100010
................................................................................................................GATGCTCCCGAGGACAACGAGA......................................................................................................................................2230.33100010
..........................................................................................................................................................................................................................G---------AAACAACCGCTGCTCCGGAA....................2170.29200020
........................................................................AACCGCTGCTCCTG------AAGACA..........................................................................................................................................................................2070.29200020
.......................................................................CAACCGCTGCTCCTG------AAGA............................................................................................................................................................................1970.29200020
.................................................................................................................................CGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGAC.....................................................25110.27301020
..................GA---------CAACCGC---TGCTCCC---GAG........................................................................................................................................................................................................................19110.27300030
...............CGAGA---------CAACCGC---TGCTCCC---GAGGA---------C............................................................................................................................................................................................................25110.27301020
....................................................................................................................................GACAACCGCTGCTCCC-------------------------------------------------------------GAG........................................................19110.27300030
....................................................................................................................................................................................................................................AAACAACCGCTGCTCCGGAAGA-------CAAC.......2640.25100010
......................................................................................................................................................................................................................................ACAACCGCTGCTCCGGAAGA-------...........2080.25200020
.........................................................................................................................................................................................................................CG---------AAACAACCGCTGCTCCG.......................1940.25100010
......................................................................................................................................................................................................................CAACG---------AAACAACCGCTGCTCCGGA.....................2440.25100100
.....................................................................................................................................................................................................................................AACAACCGCTGCTCCGGAAGA-------CAAC.......2540.25100100
......................................................................................................................................................................................................................CAACG---------AAACAACCGCTGCTCCGGAAG...................2640.25100010
.........................................................................................................................................................................................................................CG---------AAACAACCGCTGCTCCGGA.....................2140.25100010
........................................................................................................................................................................................................................ACG---------AAACAACCGCTGCTCCGGAAGA-------...........2540.25100010
.....................................................................................................................................................................................................................................AACAACCGCTGCTCCGGAAGA-------CA.........2340.25100010
.............................CAACCGC---TGCTCCC---GAGGA---------CA...........................................................................................................................................................................................................21130.23300030
......................................................................................................................................CAACCGCTGCTCCC-------------------------------------------------------------GAGGACA....................................................21130.23300030
.................................................................ACGAAACAACCGCTGCTCCTG------AAGA............................................................................................................................................................................2550.20100010
.......................................................................................................................................................................................................................................CAACCGCTGCTCCGGAAGA-------CA.........2150.20100010
.....................................................................AACAACCGCTGCTCCTG------AAGACA..........................................................................................................................................................................2350.20100010
................................................................AACGAAACAACCGCTGCTCCTG------AAGACA..........................................................................................................................................................................2850.20100010
..................................................................CGAAACAACCGCTGCTCCTG------AAGA............................................................................................................................................................................2450.20100010
...............................................................CAACGAAACAACCGCTGCTCC........................................................................................................................................................................................21100.20200020
.................................................................ACGAAACAACCGCTGCTCCTG------AAGAC...........................................................................................................................................................................2650.20100100
..................................................................CGAAACAACCGCTGCTCCTG------AA..............................................................................................................................................................................2250.20100010
................................................................AACGAAACAACCGCTGCTCCTG------AA..............................................................................................................................................................................2450.20100010
.....................................................................AACAACCGCTGCTCCTG------AAGA............................................................................................................................................................................2150.20100010
.......................................................................................................................................................................................................................................CAACCGCTGCTCCGGAAGA-------C..........2050.20100010
.......................................................................................................................................................................................................................................CAACCGCTGCTCCGGAAGA-------CAACG---...2450.20100010
...................................................................GAAACAACCGCTGCTCCTG------AAGAC...........................................................................................................................................................................2450.20100010
..................................................................CGAAACAACCGCTGCTCCTG------................................................................................................................................................................................2050.20101000
...................................................................GAAACAACCGCTGCTCCTG------AAGACA..........................................................................................................................................................................2550.20100010
.AAGACA-------ACGAGA---------CAACCGC---T....................................................................................................................................................................................................................................2050.20100010
.........................................................................................................................................................................................................................................ACCGCTGCTCCGGAAGA-------CAACG---A..2350.20100100
....................................................................AAACAACCGCTGCTCCTG------AAGAC...........................................................................................................................................................................2350.20100010
.....................................................................AACAACCGCTGCTCCTG------AAGACAA.........................................................................................................................................................................2450.20100010
....................................................................AAACAACCGCTGCTCCTG------AAGA............................................................................................................................................................................2250.20100010
..................................................................CGAAACAACCGCTGCTCCT.......................................................................................................................................................................................1950.20100010
......................................................................................................................................................................................................................CAACG---------AAACAACCGCTGCTCC........................21100.20200020
......A-------ACGAGA---------CAACCGC---TGCTCCC---GAGG.......................................................................................................................................................................................................................25110.18200020
...............................................................................................................................AACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGAC.....................................................27110.18200020
..................GA---------CAACCGC---TGCTCCC---GAGGA---------C............................................................................................................................................................................................................22110.18200020
......A-------ACGAGA---------CAACCGC---TGCTCCC---GA.........................................................................................................................................................................................................................23110.18200020
...............................................................................................................................AACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGA......................................................26110.18200020
......A-------ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------.............................................................................................................................................................................................................26110.18200020
....................................................................................................................................GACAACCGCTGCTCCC-------------------------------------------------------------GAGGAC.....................................................22110.18200020
...............................................................................................................................AACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGG.......................................................25110.18200020
...............................................................................................................................AACGAGACAACCGCTGCTCCC-------------------------------------------------------------GA.........................................................23110.18200020
......A-------ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------C............................................................................................................................................................................................................27110.18200020
.......................................................................................................................................AACCGCTGCTCCC-------------------------------------------------------------GAGGAC.....................................................19130.15200020
..............................AACCGC---TGCTCCC---GAGGA---------.............................................................................................................................................................................................................18130.15201010
.......................................................................................................................................AACCGCTGCTCCC-------------------------------------------------------------GAGGA......................................................18130.15201010
..............................AACCGC---TGCTCCC---GAGGA---------C............................................................................................................................................................................................................19130.15200020
...............................................................................GCTCCTG------AAGACAACGAG.....................................................................................................................................................................1870.14100010
..........................................................................................................................................................................................................................G---------AAACAACCGCTGCTCCGGAAGA-------...........2370.14100010
.......................................................................CAACCGCTGCTCCTG------AAGACAAC........................................................................................................................................................................2370.14100010
......................................................................ACAACCGCTGCTCCTG------AA..............................................................................................................................................................................1870.14100010
............................................................................GCTGCTCCTG------AAGACAACGAGA---.................................................................................................................................................................2270.14100010
....................................................................................................................................................................................................................................AAACAACCGCTGCTCCGG......................1870.14100010
......................................................................ACAACCGCTGCTCCTG------AAGACAACGA......................................................................................................................................................................2670.14100010
...............................................................................................................................AACGAGACAACCGCTGCT...........................................................................................................................18140.14200020
..............................................................................TGCTCCTG------AAGACAACGAGA---.................................................................................................................................................................2070.14100010
..........................................................................................................................................................................................................................G---------AAACAACCGCTGCTCCGGAAG...................2270.14100010
......A-------ACGAGA---------CAACCGC---TGCT.................................................................................................................................................................................................................................18140.14200020
..................................GC---TGCTCCC---GAGGA---------CAACGA.......................................................................................................................................................................................................20150.13201010
...........................................................................................................................................GCTGCTCCC-------------------------------------------------------------GAGGACAACG---------A.......................................20150.13201010
....................................................................................................................CTCCCGAGGACAACGAGA......................................................................................................................................1880.13100010
......................................................................................................................................................................................................................................ACAACCGCTGCTCCGGAAG...................1980.13100010
........................................................................................................................................................................................................................................AACCGCTGCTCCGGAAGA-------...........1880.13100010
........................................................................................................................................ACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------AAACA...................................2790.11100010
...................................................................................................................................................C-------------------------------------------------------------GAGGACAACG---------AAACAACCGCT.............................2290.11100010
.............................................C---GAGGA---------CAACGAAACAACCGCT.............................................................................................................................................................................................2290.11100010
................................................................................................................................................TCCC-------------------------------------------------------------GAGGACAACG---------AAACAAC.................................2190.11100010
.......................................................................................................................CCGAGGACAACGAGACAACCGCTGC............................................................................................................................2590.11100010
........................................................................................................................CGAGGACAACGAGACAACCGCTGC............................................................................................................................2490.11100010
.........................................................................................................................GAGGACAACGAGACAACCGCT..............................................................................................................................2190.11100010
...............................ACCGC---TGCTCCC---GAGGA---------CAACGAAACA...................................................................................................................................................................................................2790.11100010
..........................................TCCC---GAGGA---------CAACGAAACAAC.................................................................................................................................................................................................2190.11100010
................................................................AACGAAACAACCGCTGCTC.........................................................................................................................................................................................19100.10100010
........................................GCTCCC---GAGGA---------CAACGAAAC....................................................................................................................................................................................................20100.10100010
.......................................................................................................................................................................................................................AACG---------AAACAACCGCTGCTC.........................19100.10100010
.................................................................ACGAAACAACCGCTGCTCC........................................................................................................................................................................................19100.10100010
........................................................................................................................................................................................................................ACG---------AAACAACCGCTGCTCC........................19100.10100010
.................................................................ACGAAACAACCGCTGCTC.........................................................................................................................................................................................18100.10100010
........................................................................................................................................................................................................................ACG---------AAACAACCGCTGCTC.........................18100.10100010
..............................................................................................................................................GCTCCC-------------------------------------------------------------GAGGACAACG---------AAAC....................................20100.10100010
...................................................................................................................................AGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------........................................27110.09100010
.................AGA---------CAACCGC---TGCTCCC---GAGGA---------CAACG........................................................................................................................................................................................................27110.09100010
................................................................................................................................ACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGG.......................................................24110.09100010
................GAGA---------CAACCGC---TGCTCCC---GAGGA---------.............................................................................................................................................................................................................23110.09100010
.................................................................................................................................CGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACA....................................................26110.09100010
................GAGA---------CAACCGC---TGCTCCC---GAG........................................................................................................................................................................................................................21110.09101000
...............CGAGA---------CAACCGC---TGCTCCC---GAGGA---------CA...........................................................................................................................................................................................................26110.09100010
...................................................................................................................................AGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAAC..................................................26110.09101000
......A-------ACGAGA---------CAACCGC---TGCTCCC---GAGGA---------CA...........................................................................................................................................................................................................28110.09100010
.................AGA---------CAACCGC---TGCTCCC---GAGGA---------CA...........................................................................................................................................................................................................24110.09100010
....................................................................................................................................GACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAA...................................................24110.09100010
...............................................................................................................................AACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAG........................................................24110.09100010
....................................................................................................................................GACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAAC..................................................25110.09100010
.................................................................................................................................................................................................................GAGGACAACG---------AAACAACCCTG.............................21110.09100010
...............................................................................................................................AACGAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACA....................................................28110.09100010
......A-------ACGAGA---------CAACCGC---TGCTCCC---GAG........................................................................................................................................................................................................................24110.09100010
....................................................................................................................................GACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------........................................26110.09100010
.................AGA---------CAACCGC---TGCTCCC---GAGG.......................................................................................................................................................................................................................21110.09100010
.................AGA---------CAACCGC---TGCTCCC---GAGGA---------.............................................................................................................................................................................................................22110.09100010
.................AGA---------CAACCGC---TGCTCCC---GAGGA---------CAAC.........................................................................................................................................................................................................26110.09101000
...................................................................................................................................AGACAACCGCTGCTCCC-------------------------------------------------------------GAGG.......................................................21110.09100010
..............ACGAGA---------CAACCGC---TGCTCCC---GAGG.......................................................................................................................................................................................................................24110.09100010
..................................................................................................................................GAGACAACCGCTGCTCCC-------------------------------------------------------------GAG........................................................21110.09101000
..................GA---------CAACCGC---TGCTCCC---GAGGA---------CAACG........................................................................................................................................................................................................26110.09100010
..................................................................................................................................GAGACAACCGCTGCTCCC-------------------------------------------------------------GAGGA......................................................23110.09100010
...................................................................................................................................AGACAACCGCTGCTCCC-------------------------------------------------------------GAGGACA....................................................24110.09100010
...................................................................................................................................AGACAACCGCTGCTCCC-------------------------------------------------------------GAGGA......................................................22110.09100010
..................GA---------CAACCGC---TGCTCCC---GAGGA---------CAAC.........................................................................................................................................................................................................25110.09100010
..................GA---------CAACCGC---TGCTCCC---GAGGA---------CAA..........................................................................................................................................................................................................24110.09100010
.................................................GAGGA---------CAACGAAACAACCCTG.............................................................................................................................................................................................21110.09100010
.............................CAACCGC---TGCTCCC---GAGGA---------CAACGA.......................................................................................................................................................................................................25130.08100010
.............................CAACCGC---TGCTCCC---GAGGA---------CAACG........................................................................................................................................................................................................24130.08100010
.....................................................................................................................................ACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAA...................................................23130.08100010
...................A---------CAACCGC---TGCTCCC---GAGGA---------CAA..........................................................................................................................................................................................................23130.08100010
...............................ACCGC---TGCTCCC---GAGGA---------CAAC.........................................................................................................................................................................................................21130.08100010
........................................................................................................................................ACCGCTGCTCCC-------------------------------------------------------------GAGGACAAC..................................................21130.08100010
........................................................................................................................................ACCGCTGCTCCC-------------------------------------------------------------GAGGACA....................................................19130.08100010
...............................ACCGC---TGCTCCC---GAGGA---------CA...........................................................................................................................................................................................................19130.08100010
.................................CGC---TGCTCCC---GAGGA---------CAAC.........................................................................................................................................................................................................19130.08100010
GAAGACA-------ACGAGA---------CAACCG.........................................................................................................................................................................................................................................19130.08100010
......................................................................................................................................CAACCGCTGCTCCC-------------------------------------------------------------GAGGA......................................................19130.08100010
.............................CAACCGC---TGCTCCC---GAGGA---------.............................................................................................................................................................................................................19130.08100010
.....................................................................................................................................ACAACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------........................................25130.08100010
...................A---------CAACCGC---TGCTCCC---GAGGA---------CAACG........................................................................................................................................................................................................25130.08100010
...................A---------CAACCGC---TGCTCCC---GAGGA---------CA...........................................................................................................................................................................................................22130.08100010
...............................ACCGC---TGCTCCC---GAGGA---------C............................................................................................................................................................................................................18130.08100010
........................................................................................................................................ACCGCTGCTCCC-------------------------------------------------------------GAGGAC.....................................................18130.08100010
.....................................................................................................................................ACAACCGCTGCTCCC-------------------------------------------------------------GAGGACA....................................................22130.08100010
......................................................................................................................................CAACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------A.......................................25130.08100010
......................................................................................................................................CAACCGCTGCTCCC-------------------------------------------------------------GAGGACAACG---------........................................24130.08100010
..........................................................................................................................................CGCTGCTCCC-------------------------------------------------------------GAGGACAAC..................................................19130.08100010
......A-------ACGAGA---------CAACCGC---TGCTC................................................................................................................................................................................................................................19140.07100010
............................................................................................................................GACAACGAGACAACCGCT..............................................................................................................................18140.07100010
..............................................................................................................................CAACGAGACAACCGCTGCT...........................................................................................................................19140.07100100
...............................................................................................................................AACGAGACAACCGCTGCTC..........................................................................................................................19140.07100010
...GACA-------ACGAGA---------CAACCGC---T....................................................................................................................................................................................................................................18140.07100010
.....CA-------ACGAGA---------CAACCGC---TGCT.................................................................................................................................................................................................................................19140.07100100
droVir3
GAAACGC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCAG------AAGA---------------------------------ATCTACTCCTGATGTACCTGAGGAGA-------------------------CTACCCCGG---------------CGCCAGAAGAGCCCG---------------------------TAGA-------AACCACTAAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............AGAGAAATCT---ACCCA---------------------------------------------AGCACCAG------A...............................................................................................................................................................................2414.004004000000000000000000000000000000000000000000000000000000000000
.....GC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCA.......................................................................................................................................................................................2513.003001200000000000000000000000000000000000000000000000000000000000
.............................................................................................AGA---------------------------------ATCTACTCCTGATGTACCTGAGGA...................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTACCTGAGGAGA-------------------------CTACCCCGG---------------CGC.............................................................2512.002001000000000001000000000000000000000000000000000000000000000000
..............................................................................................GA---------------------------------ATCTACTCCTGATGTACCTGAGGA...................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
...............................................................................................A---------------------------------ATCTACTCCTGATGTACCTGAGGA...................................................................................................................2512.002000100000000000000100000000000000000000000000000000000000000000
...................................................................................................................................CTACTCCTGATGTACCTGAGG....................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000100000
....................................................................................AG------AAGA---------------------------------ATCTACTCCTGAT..............................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
...............................................................................................A---------------------------------ATCTACTCCTGATGTACCTGAGG....................................................................................................................2412.002001100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CTACTCCTGATGTACCTGAGGA...................................................................................................................2212.002001100000000000000000000000000000000000000000000000000000000000
.............................................................................................AGA---------------------------------ATCTACTCCTGATGTACCTGAG.....................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................G------AAGA---------------------------------ATCTACTCCTGATGTACCTGAGGA...................................................................................................................2912.002000100000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................GA-------------------------CTACCCCGG---------------CGCCAGAAGAGCCC..................................................2512.002000100000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................GTACCTGAGGAGA-------------------------CTACCCC.................................................................................2012.002000000000000001000000000000000000000000000000000000000000001000
..............................................................................................................................................GTACCTGAGGAGA-------------------------CTACCCCGG---------------CGCC............................................................2611.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACCCCGG---------------CGCCAGAAGAGCCCG---------------------------TAG...................2511.001000000000000000000000000000000000000000000000000000000000001000
..AACGC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCA.......................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GCCAGAAGAGCCCG---------------------------TAGA-------...........1811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TGAGGAGA-------------------------CTACCCCGG---------------CGC.............................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...............AGAGAAATCT---ACCCA---------------------------------------------AGCACCAG------................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................GTACCTGAGGAGA-------------------------CTACCCCG................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......C-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCA.......................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..................GAAATCT---ACCCA---------------------------------------------AGCACCAG------AAGA---------------------------------AT.........................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...............AGAGAAATCT---ACCCA---------------------------------------------AGCACCA.......................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACCCCGG---------------CGCCAGAAGAGCCCG---------------------------TAGA-------...........2611.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................AAGA---------------------------------ATCTACTCCTGATGT............................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...ACGC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCAG------A...............................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................GGAGA-------------------------CTACCCCGG---------------CGCCAGAAGA......................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....CGC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCA..........................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CTACCCCGG---------------CGCCAGAAGAGCCCG---------------------------TAGA-------...........2811.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................TCTACTCCTGATGTACCTGAGGA...................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................G------AAGA---------------------------------ATCTACTCCTGAT..............................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................GAAATCT---ACCCA---------------------------------------------AGCACCAG------AA..............................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..............CAGAGAAATCT---ACCCA---------------------------------------------AGCACC........................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGATGTACCTGAGGAGA-------------------------CTACCCC.................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
.............................................................................................AGA---------------------------------ATCTACTCCTGATGTACCTGAGG....................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GA-------------------------CTACCCCGG---------------CGCCAGAAGAGCCCG---------------------------T.....................2711.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................GA---------------------------------ATCTACTCCTGATGTACCTGA......................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................A---------------------------------ATCTACTCCTGATGTACCTG.......................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................GG---------------CGCCAGAAGAGCCCG---------------------------TAGA-------AA.........2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................ACCAG------AAGA---------------------------------ATCTACTCCTGATGTACCT........................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....CGC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCAG------A...............................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................A---------------------------------ATCTACTCCTGATGTACCTGAGGAGA-------------------------C.......................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CTACTCCTGATGTACCTGAGGAGA-------------------------CT......................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.......................CT---ACCCA---------------------------------------------AGCACCAG------AAGA---------------------------------...........................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
...ACGC-------CAGAGAAATCT---ACCCA---------------------------------------------AGCACCA.......................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACTCCTGATGTACCTGAGGAGA-------------------------........................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CTACTCCTGATGTACCTGAGGAGA-------------------------........................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CCTGAGGAGA-------------------------CTACCCCGG---------------C...............................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AGA-------------------------CTACCCCGG---------------CGCCAGAAG.......................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GATGTACCTGAGGAGA-------------------------CTACCCCG................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
..................GAAATCT---ACCCA---------------------------------------------AGCACCAG------A...............................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TACTCCTGATGTACCTGAGG....................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................AG------AAGA---------------------------------ATCTACTCCTGATGTA...........................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
...................AAATCT---ACCCA---------------------------------------------AGCACCAG------AAGA---------------------------------...........................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................GAAATCT---ACCCA---------------------------------------------AGCACCA.......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AGA-------------------------CTACCCCGG---------------CGCCAGAAGAGCCCG---------------------------T.....................2811.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................GG---------------CGCCAGAAGAGCCCG---------------------------TAGA-------...........2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................GTACCTGAGGAGA-------------------------CTACCCCGG---------------................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TCTACTCCTGATGTACCTGAGG....................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
droGri2
CAAGAAC-------CGGAAGATTCA---ACCACCGA---GGGCTCT---GGCGA---------AGGTGAAACCACAAATGCAACCG---ATGAACCTGC------------------------------CGAAACAACCGAAGAACCCG-------------------AGGAA---TCGA------------------------CCACAGAAAGTTCCG---------------------------GCGA-------A----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................GAAGAACCCG-------------------AGGAA---TCGA------------------------CCACA...........................................................2411.00110

Generated: 05/17/2015 at 10:47 PM