dse_819

CDS [Dsec\GM10234-cds]; CDS [Dsec\GM10234-cds]; exon [dsec_GLEANR_10259:6]; exon [dsec_GLEANR_10259:5]; intron [Dsec\GM10234-in]

##################################################--------------------------------------------------------------################################################## TGCCTCCAATGGCGTCTTCGGCTCAAAGTTTGTGACCATTTGTGTAACAGGTAAGATTCACGATTATATTCTGTTTAACAAACTAGTACCAAATCATGTTTGAACATTTCAGGAGATAAAACCAAACAGGTGCACATGGAAGGCTATGCGGTTTCGGCTCAG ************************************************............................(((((..............)))))..........************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V113 male body	M054 female body	V115 head	V114 embryo
...........................................................................................................................AAACAGGTGCACATGGAAGGCTATGCG............	27	0	1	2.00	2	2	0	0	0
........................................................................................................................ACCAAACAGGTGCACATGTAAGGCT.................	25	1	1	1.00	1	1	0	0	0
................................................................................................................................GGTGCACATGGAAGGCTA................	18	0	1	1.00	1	0	0	1	0
...............................GTGACCATTTGTGTAACAGGA..............................................................................................................	21	1	1	1.00	1	1	0	0	0
......................................................................................................................................CATGGAAGGCTATGCGGTTTCGGCT...	25	0	1	1.00	1	1	0	0	0
........................................................................................................................ACCAAACAGGTGCACATGGAAG....................	22	0	1	1.00	1	1	0	0	0
...............................GTGACCATTTGTGTAACAGGAGATA..........................................................................................................	25	3	1	1.00	1	1	0	0	0
...........................................................................................................................AAACAGGTGCACATGGAAGGCT.................	22	0	1	1.00	1	1	0	0	0
............................................................................................................................AACAGGTGCACATGGAAGGCT.................	21	0	1	1.00	1	1	0	0	0
.............................................................................................................................................GGCTATGCGGTTTCGGCTCA.	20	0	1	1.00	1	0	0	1	0
................................................................................................................................GGTGCACATGGAAGGCTAT...............	19	0	1	1.00	1	0	0	1	0
........................................................................................................................................TGGGAGGCTATGCGGTTTCGGCTCAG	26	1	1	1.00	1	0	1	0	0
................................................................................................................................GGTGCACATGGAAGGCTATGCG............	22	0	1	1.00	1	1	0	0	0
........................................................................................................................................TGTAAGGCTATGCGGTTTCGGCTCA.	25	1	1	1.00	1	0	1	0	0
........ATGGCGTCTTCGGCTCAAA.......................................................................................................................................	19	0	1	1.00	1	0	1	0	0
.......................................................................................................................................ATGGAAGGCTATGCTGTTCCGGC....	23	2	1	1.00	1	0	1	0	0
.........TGGCGTCTTCGGCTCAAAGTTTGTGAC..............................................................................................................................	27	0	1	1.00	1	0	1	0	0
.............................................................................................................................ACAGGTGCACATGGAAGGCT.................	20	0	1	1.00	1	1	0	0	0
........ATGGCGTCTTCGGCTCAAAGTTTGT.................................................................................................................................	25	0	1	1.00	1	0	0	0	1
...........................................................................................................................................AAGGCTATGCGGTTTCGGCT...	20	0	1	1.00	1	0	1	0	0
...............................GTGACCATTTGTGTAACAGGAG.............................................................................................................	22	2	1	1.00	1	0	0	0	1
..............................................................................................................................................GCTATGCGGTTTCGGCTCAG	20	0	1	1.00	1	1	0	0	0
............................TTTGTGACCATTTGTGTAACA.................................................................................................................	21	0	1	1.00	1	0	1	0	0
....................GCTCAAAGTTTGTGACCATTTG........................................................................................................................	22	0	1	1.00	1	1	0	0	0
........ATGGCGTCTTCGGCTCAAAGTTTGTG................................................................................................................................	26	0	1	1.00	1	1	0	0	0
.................................................................................................................................GTGCACATGGAAGGCTATGC.............	20	0	1	1.00	1	1	0	0	0
.......AATGGCGTCTTCGGCTCAAAGTTTGTG................................................................................................................................	27	0	1	1.00	1	1	0	0	0
.............................................................................................................................ACAGGTGCACATGGAAGGCTAT...............	22	0	1	1.00	1	1	0	0	0
....................GCTCAAAGTTTGTGACCATTTGTGT.....................................................................................................................	25	0	1	1.00	1	1	0	0	0
................................................................................................................................GGTGCACATGCAAGGCTACGCG............	22	2	1	1.00	1	1	0	0	0
..........................................................................................................TAACAGGAGATAAAACCA......................................	18	2	10	0.10	1	0	0	1	0
............................................................................................................TCAGGAGGTAAAAGCAGAC...................................	19	3	18	0.06	1	0	0	0	1

ACGGAGGTTACCGCAGAAGCCGAGTTTCAAACACTGGTAAACACATTGTCCATTCTAAGTGCTAATATAAGACAAATTGTTTGATCATGGTTTAGTACAAACTTGTAAAGTCCTCTATTTTGGTTTGTCCACGTGTACCTTCCGATACGCCAAAGCCGAGTC ************************************************............................(((((..............)))))..........************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V115 head
......................AGTTGCGAACCCTGGTAAA.........................................................................................................................	19	3	20	0.05	1	1
....................................................TTATAAGTGCTTACATAAGA..........................................................................................	20	3	20	0.05	1	1

Species	Coordinate	ID	Alignment
droSec2	scaffold_13:234660-234821 -	dse_819	TGCCTCCAATGGCGTCTTCGGCTCAAAGTTTGTGACCATTTGTGTAACAGGTAAGATT-CA-----CGA--TT--------------ATA---TT------------------CTG---TTT-AACAA-ACT--A--GTACCAAAT---------CATGT-----------------------------------------------------TT--GAACAT--TTCAGGAGATAAAACCAAACAGGTGCACATGGAAGGCTATGCGGTTTCGGCTCAG
droSim2	3r:20959232-20959393 -	dsi_5526	TGCCTCCAATGGCGTCTTCGGCTCAAAGTTTGTGACCATTTGTGTAACAGGTAAGATT-CA-----CGA--TG--------------ATA---TT------------------CTG---TTT-AACGA-ACC--A--GTACCAAAT---------CATGT-----------------------------------------------------TT--GAACAT--TTCAGGAGATAAAACCAAACAGGTGCACATGGAAGGCTATGCGGTTTCGGCTCAG
dm3	chr3R:21447713-21447874 -		TGCCTCCAATGGCGTCTTCGGCTCTAAGTTTGTGACCATTTGTGTAACAGGTAAGATT-CA-----CGATTTA--------------A-----TA------------------CTG---CTT-AATGA-ACT--A--GTACCAAAA---------TAGTT-----------------------------------------------------TT--TAACAT--TACAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTTTCGGCTCAG
droEre2	scaffold_4820:6594086-6594245 +		TGCCTCCAATGGCGTTTTCGGCTCAAAGTTTGTGACGATTTGTGTAACAGGTAAGCT--CA-----AGT--TG--------------A-----TG------------------CTG---TGA-AATGA-ATT--A--GTACCAAAA---------CTGTT--------C--------------------------------------------TT--AAACAT--TTCAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTCTCGGCTCAG
droYak3	3R:25026428-25026587 +		TGCCTCCAATGGCGTCTTTGGCTCAAAGTTTGTCACCATTTGTGTAACAGGTAAGATT-CA-----CGT--TG--------------A-----GT------------------CCG---CTT-AATGA-TTT--G--GTACCAAAA---------CGGCT-----------------------------------------------------TT--GGACAT--TTCAGGAGACAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTCTCGGCTCAG
droEug1	scf7180000409682:1183305-1183461 +		TGCCTCCAATGGCGTCTTTGGCTCAAAGTTCGTGACTATTTGTGTGACGGGTAAGATT-TT-----GA---------CCTT----------------------------------------TA----------------------------------------AATATCATAGTTC--------ATTAA-------TTCAATTT---------GT--TCACAT--TTTAGGAGATAAAACCAAACAAGTGCATATGGAGGGCTATGCGGTTTCGGCTCAG
droBia1	scf7180000302136:2294914-2295074 -		CGCCTCCAACGGTGTCTTTGGCTCAAAGTTCGTGACGATTTGTGTGACGGGTAGGATT-CT-----GGT--TA--------------ATGT---T------------------TTC---TTTA-AGAA-AG----------------TTATTAAA-----------------------------------------TTTTATAT---------TT--TCAC-C--TTTAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTCTCGGCTCAG
droTak1	scf7180000415257:332743-332907 -		CGCCTCCAACGGTGTCTTTGGCTCAAAGTTCGTGACGATTTGTGTGACGGGTGAGATT-CC-----GGC--TA--------------AGGA--TG------------------TTC----TTAAGTAAAGTT--AGTTTAC----------TAAATTGTT-----------------------------------------------------CT--CCCTCT--TTTAGGGGATAAAACCAAACAAGTGCACATGGAGGGCTATGCGGTCTCGGCTCAG
droEle1	scf7180000491280:3158185-3158348 -		TGCCTCCAACGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACGGGTAAGCAG-CTCTTCAGGT--TG--------------A-----TT------------------CTC---CTC-AA-----T----------------TTATTTAA-----------------------------------------TGTTAT------GCTGATT--TCACAT--TTCAGGAGATAAAACCAAACAGGTGCACATGGAGGGCTATGCGGTGTCCGCTCAG
droRho1	scf7180000779501:476489-476649 +		TGCCTCCAATGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACAGGTAAGCTC--T-----GAT--TG--------------ATCT---T--------------------TCTCGTTA-TGT--AA---------------CATAT----------CT-----------------------------------CAAT------GCTGCTT--TCACAT--TTCAGGAGATAAAACCAAACAAGTGCACATGGAGGGCTATGCGGTCTCCGCTCAG
droFic1	scf7180000454055:1363749-1363910 -		TGCCTCCAACGGCGTCTTTGGCTCAAAGTTCGTGACTATTTGTGTGACGGGTAAGATT-GA-----G-T-TAA--------------A-----CTCCTTT-------------C--------------TGTG-T-ATTTATTAAAACGTAT----------TT---------------------------------------AA---------TT--GTAAAT--TGCAGGAGATAAAACCAAACAAGTTCACATGGAAGGCTACGCAGTTTCGGCTCAG
droKik1	scf7180000302639:1588645-1588811 +		TGCCTCCAATGGCGTCTTTGGCTCAAAGTTCGTGACCATTTGTGTGACGGGTAAGCAT-AT-----AGT--GTGGCAT-----------------CCTCT-------------C--------------TGTTCTAGTTTTT----------TAAA-----------------------------------------TTTTGT------GTTCCTT--TTGTTT--TTTAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTATCGGCTCAG
droAna3	scaffold_13340:3703795-3703958 -		TGCCTCGAACGGTGTATTCGGCTCAAAATTCGTGACTATTTGTGTGACGGGTAAGTGG-GA----------------TCTC-----------------T-----------------------A----------------------------------------CTCTTCCTAGACCTAATGGAAATTACTTTATCT-----------------TTTCGTTAAT--TTTAGGAGATAATACCAAACAAGTGCACATGGAAGGATATGCTGTATCGGCCCAG
droBip1	scf7180000396712:649726-649888 +		TGCCTCAAACGGCGTCTTTGGCTCAAAATTCGTGACTATATGTGTGACGGGTAAGTGG-AA----------------TCTT-----------------T-----------------------A----------------------------------------CTTTTCCTAGGCCCTTTAGAAGTTAAAAAA---TCTT-------------TT--GATTAT--TTTAGGAGATAATACCAAGCAAGTGCACATGGAAGGATATGCTGTTTCGGCCCAG
dp5	2:21196247-21196408 -		TGCCTCAAATGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACGGGTAAGTGTTTT-----CCA--TC--------------ACT---CG------------------CT--------------------------------------------------TTTCATCGAGC--------ACTAATCTGACATTCCATAT---------------GC-A--TTTAGGAGATAAAACCAAACAAGTACATATGGAGGGATATGCGGTGTCTGCCCAG
droPer2	scaffold_3:3971656-3971817 -		TGCCTCAAATGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACGGGTAAGTGTTTT-----CCA--TC--------------ACT---CG------------------GT--------------------------------------------------TTTCATCGAGC--------AGTAATCTGACATTCCATAT---------------GC-A--CTTAGGAGATCAAACCAAACAAGTACATATGGAGGGATATGCGGTGTCTGCCCAG
droWil2	scf2_1100000004943:14602149-14602312 +		TGCCACAAATGGCGTTTTTGGATCAAAATTTGTGACTATTTGTGTAACAGGTGAGTACTTT-----TC---------TCTCATAGCAA-----T--------ATGGATTAATCTAT-----------------------TG---------------------------------------------------------CAAT-T------GGAAT--TTATATTGTGCAGGCGATCAAACGAAACAAGTTCATATGGAAGGTTATGCTGTCTCTGCTCAA
droVir3	scaffold_12855:6854127-6854297 -		TGCCACAAATGGCACTTTCGGCTCCAAATTTGTGACCATATGTGTGACTGGTGAGTGT-TA-----GAT--GAAATA----------ACAATACCCAGCC-------------T--------------TATT-C-ATATAC----------TATATTCTTCTT---------------------------------------TA---------AT--CTCTTT--AAAAGGTGATCAAACAAAACAGGTGCACATGGAAGGCTATGCTGTGTCCGCTCAG
droMoj3	scaffold_6540:25758725-25758900 +		TGCCACAAATGGCACATTCGGCTCTAAATTTGTAACAATTTGTGTAACTGGTGAGTTT-AG------CT--TA--------------ATGA---T--------------------TATAAGTA-TT--TATG-T-ATATATAAAAACATTT-----AT--------------------------------------------ATTTATACGTTGT--GCGTTT--GTCAGGTGATCAAACCAAGCAGGTGCACATGGAGGGTTACGCTGTTTCCGCTCAA
droGri2	scaffold_14906:2997300-2997470 -		TGCCACAAACGGCACCTTTGGCTCCAAATTTGTAACCATTTGTGTGACTGGTGAGTGT-AG-----TA----A--------------ACAATAT-CTTATCAATGGCTTG-----------A-------ATTGTAGCTTAT----------TATA-----------------------------------------TCTGCT-----------AT--TCTTTG--AACAGGTGATCAGACCAAACAGGTGCACATGGAGGGCTATGCTGTGTCCGCTCAG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSec2

TGCCTCCAATGGCGTCTTCGGCTCAAAGTTTGTGACCATTTGTGTAACAGGTAAGATT-CA-----CGA--TT--------------ATA---TT------------------CTG---TTT-AACAA-ACT--A--GTACCAAAT---------CATGT-----------------------------------------------------TT--GAACAT--TTCAGGAGATAAAACCAAACAGGTGCACATGGAAGGCTATGCGGTTTCGGCTCAG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAAGGCTATGCG............	27	1	2.00	2	0	2	0	0
......................................................................................................................................................................................................................................................GGTGCACATGGAAGGCTA................	18	1	1.00	1	0	0	0	1
...............................GTGACCATTTGTGTAACAGGA....................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0
............................................................................................................................................................................................................................................................CATGGAAGGCTATGCGGTTTCGGCT...	25	1	1.00	1	0	1	0	0
..............................................................................................................................................................................................................................................ACCAAACAGGTGCACATGGAAG....................	22	1	1.00	1	0	1	0	0
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAAGGCT.................	22	1	1.00	1	0	1	0	0
..................................................................................................................................................................................................................................................AACAGGTGCACATGGAAGGCT.................	21	1	1.00	1	0	1	0	0
...................................................................................................................................................................................................................................................................GGCTATGCGGTTTCGGCTCA.	20	1	1.00	1	0	0	0	1
......................................................................................................................................................................................................................................................GGTGCACATGGAAGGCTAT...............	19	1	1.00	1	0	0	0	1
......................................................................................................................................................................................................................................................GGTGCACATGGAAGGCTATGCG............	22	1	1.00	1	0	1	0	0
........ATGGCGTCTTCGGCTCAAA.............................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0
.........TGGCGTCTTCGGCTCAAAGTTTGTGAC....................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0
...................................................................................................................................................................................................................................................ACAGGTGCACATGGAAGGCT.................	20	1	1.00	1	0	1	0	0
........ATGGCGTCTTCGGCTCAAAGTTTGT.......................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................AAGGCTATGCGGTTTCGGCT...	20	1	1.00	1	1	0	0	0
...............................GTGACCATTTGTGTAACAGGAG...................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................GCTATGCGGTTTCGGCTCAG	20	1	1.00	1	0	1	0	0
............................TTTGTGACCATTTGTGTAACA.......................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0
....................GCTCAAAGTTTGTGACCATTTG..............................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
........ATGGCGTCTTCGGCTCAAAGTTTGTG......................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................................................................GTGCACATGGAAGGCTATGC.............	20	1	1.00	1	0	1	0	0
.......AATGGCGTCTTCGGCTCAAAGTTTGTG......................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0
...................................................................................................................................................................................................................................................ACAGGTGCACATGGAAGGCTAT...............	22	1	1.00	1	0	1	0	0
....................GCTCAAAGTTTGTGACCATTTGTGT...........................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0

droSim2

TGCCTCCAATGGCGTCTTCGGCTCAAAGTTTGTGACCATTTGTGTAACAGGTAAGATT-CA-----CGA--TG--------------ATA---TT------------------CTG---TTT-AACGA-ACC--A--GTACCAAAT---------CATGT-----------------------------------------------------TT--GAACAT--TTCAGGAGATAAAACCAAACAGGTGCACATGGAAGGCTATGCGGTTTCGGCTCAG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..............................................................................................................................................................................................................................................................TGGAAGGCTATGCGGTTTC.......	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TCTTCGGCTCAAAGTTTGTGAC....................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CATGGAAGGCTATGCGGTTTCGGCT...	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAAGGCTAT...............	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................CAAAGTTTGTGACCATTTGTGTAACAGGA....................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................CTCAAAGTTTGTGACCATT................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........TGGCGTCTTCGGCTCAAAGTTTGTGACC...................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......AATGGCGTCTTCGGCTCA...............................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...CTCCAATGGCGTCTTCGGCTCA...............................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TCCAATGGCGTCTTCGGCTCAA..............................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

dm3

TGCCTCCAATGGCGTCTTCGGCTCTAAGTTTGTGACCATTTGTGTAACAGGTAAGATT-CA-----CGATTTA--------------A-----TA------------------CTG---CTT-AATGA-ACT--A--GTACCAAAA---------TAGTT-----------------------------------------------------TT--TAACAT--TACAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTTTCGGCTCAG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..............................................................................................................................................................................................................................................................TGGAAGGCTATGCGGTTTCG......	20	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................AAGGCTATGCGGTTTCGGCT...	20	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGCT.................	21	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TGGAAGGCTATGCGGTTTCGGCT...	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................CGGCTCTAAGTTTGTGACCATTTGTGT...........................................................................................................................................................................................................................................	27	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................ATGGAAGGCTATGCGGTTTCGGCTC..	25	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................................................................................................................................................CAGGAGATAAAACCAAACAAGT...............................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................TGTGACCATTTGTGTAACAGGA....................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................CTAAGTTTGTGACCATTTGTGTAACATC.....................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAGGCTATGCGGTTTCGGC....	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAGGCTATGCGGTTTCGGCT...	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAAACCAAACAAGTGCACATGGAA.....................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................CGGCTCTAAGTTTGTGATT...................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

TGCCTCCAATGGCGTTTTCGGCTCAAAGTTTGTGACGATTTGTGTAACAGGTAAGCT--CA-----AGT--TG--------------A-----TG------------------CTG---TGA-AATGA-ATT--A--GTACCAAAA---------CTGTT--------C--------------------------------------------TT--AAACAT--TTCAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTCTCGGCTCAG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGCT.................	21	1	2.00	2	0	0	0	0	2	0	0
.GCCTCCAATGGCGTTTTCGGCTCA...............................................................................................................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0	0
....................GCTCAAAGTTTGTGACGATT................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TGGAAGGCTATGCGGTCTCGGCTC..	24	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAACAAGTGCACATGGAAGGCT.................	22	1	1.00	1	0	0	0	0	1	0	0
.GCCTCCAATGGCGTTTTCGGCTC................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
........................AAAGTTTGTGACGATTTGTGTAA.........................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TGCACATGGAAGGCTATGCG............	20	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................................................................CCAAACAAGTGCACATGGAAGGCT.................	24	1	1.00	1	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................ATAAAACCAAACAAGTGCACATGG.......................	24	1	1.00	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................AAACAAGTGCACATGGAA.....................	18	1	1.00	1	0	0	0	0	0	1	0
.........................AAGTTTGTGACGATTTGTGTAACAGGA....................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
..........GGCGTTTTCGGCTCAAAGTTTG........................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAGGCTATGCGGTCTCGGCTCA.	23	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AAGTGCACATGGAAGGCT.................	18	1	1.00	1	0	0	0	0	0	1	0
....................GCTCAAAGTTTGTGACGATTTGTGT...........................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................GCTATGCGGTCTCGGCTCA.	19	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................................................................................ACATGGAAGGCTATGCGGT..........	19	1	1.00	1	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................GTGCACATGGAAGGCTATGC.............	20	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................GCTATGCGGTCTCGGCTC..	18	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................AACCAAACAAGTGCACATGGAA.....................	22	1	1.00	1	0	0	0	0	0	1	0
..................CGGCTCAAAGTTTGTGACGATTTGTGT...........................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AAGTGCACATGGAAGGCTATGCGGTC.........	26	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGCTATGA.............	25	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................AGGCTATGCGGTCTCGGCTCA.	21	1	1.00	1	1	0	0	0	0	0	0
.......................CAAAGTTTGTGACGATTTGTGTAACA.......................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................TGCACATGGAAGGCTATGCGGTCTCG......	26	1	1.00	1	0	0	0	0	1	0	0
...........................GTTTGTGACGATTTGTGTAACAGGA....................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...........................GTTTGTGACGATTTGTGTAACA.......................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
........................AAAGTTTGTGACGATTTGTGT...........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAG....................	18	1	1.00	1	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................ATGGAAGGCTATGCGGTCTCGGCTCA.	26	1	1.00	1	1	0	0	0	0	0	0
....TCCAATGGCGTTTTCGGCTCAAAGTTTG........................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
............................TTTGTGACGATTTGTGTAACA.......................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...............................GTGACGATTTGTGTAACAG......................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................ACAAGTGCACATGGAAGGCT.................	20	1	1.00	1	0	0	0	0	1	0	0
..........................AGTTTGTGACGATTTGTGTAACAGG.....................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................AGTGCACATGGAAGGCTATGCGGTC.........	25	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGC..................	20	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................AGTGCACATGGAAGGCTATGCGGT..........	24	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................................................................................GGAAGGCTATGCGGTCTCGGC....	21	1	1.00	1	1	0	0	0	0	0	0
........................AAAGTTTGTGACGATTTGTGTA..........................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.GCCTCCAATGGCGTTTTCGGCT.................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0

droYak3

TGCCTCCAATGGCGTCTTTGGCTCAAAGTTTGTCACCATTTGTGTAACAGGTAAGATT-CA-----CGT--TG--------------A-----GT------------------CCG---CTT-AATGA-TTT--G--GTACCAAAA---------CGGCT-----------------------------------------------------TT--GGACAT--TTCAGGAGACAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTCTCGGCTCAG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGCT.................	21	1	4.00	4	0	0	0	0	0	0	4	0	0	0	0
......................................................................................................................................................................................................................................................AGTGCACATGGAAGGCTATGC.............	21	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
........................AAAGTTTGTCACCATTTGTGTA..........................................................................................................................................................................................................................................	22	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................ACAAGTGCACATGGAAGGCT.................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
......................................................................................................................................................................................................................................................AGTGCACATGGAAGGCTATGCG............	22	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
........ATGGCGTCTTTGGCTCAAAG............................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGC..................	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
............................TTTGTCACCATTTGTGTAACAGGA....................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................AGGCTATGCGGTCTCGGCT...	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................GCTATGCGGTCTCGGCTCAG	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGCTATGCGGTC.........	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................AGTGCACATGGAAGGCTATGCGGTC.........	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................AACCAAACAAGTGCACATGGAAGGCT.................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................GGAAGGCTATGCGGTCTC.......	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................AAGTTTGTCACCATTTGTGTA..........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................AAGTGCACATGGAAGGCTATGCGGTC.........	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
TGCCTCCAATGGCGTCTTTGGCTCA...............................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
.................................CACCATTTGTGTAACAGGA....................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................CAAAACCAAACAAGTGCACATGGAAGG...................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............GTCTTTGGCTCAAAGTTTGTCACC...................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................TTGGCTCAAAGTTTGTCACC...................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....TCCAATGGCGTCTTTGGCT.................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................AAGTTTGTCACCATTTGTGTAAC........................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................GTCACCATTTGTGTAACAGGA....................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......AATGGCGTCTTTGGCTCAAAGT...........................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................AAGGCTATGCGGTCTCGGCTC..	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAAGTGCACATGGAAGGCTATGCGGTCT........	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGCTATGCG............	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........ATGGCGTCTTTGGCTCAAAGT...........................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................ACCAAACAAGTGCACATGGAA.....................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGG...................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................CATGGAAGGCTATGCGGTCTC.......	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................CATGGAAGGCTATGCGGTCTCGGCT...	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................TTTGGCTCAAAGTTTGTCACC...................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TGCACATGGAAGGCTATGCGG...........	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................CATGGAAGGCTATGCGGTCT........	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

TGCCTCCAATGGCGTCTTTGGCTCAAAGTTCGTGACTATTTGTGTGACGGGTAAGATT-TT-----GA---------CCTT----------------------------------------TA----------------------------------------AATATCATAGTTC--------ATTAA-------TTCAATTT---------GT--TCACAT--TTTAGGAGATAAAACCAAACAAGTGCATATGGAGGGCTATGCGGTTTCGGCTCAG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CGCCTCCAACGGTGTCTTTGGCTCAAAGTTCGTGACGATTTGTGTGACGGGTAGGATT-CT-----GGT--TA--------------ATGT---T------------------TTC---TTTA-AGAA-AG----------------TTATTAAA-----------------------------------------TTTTATAT---------TT--TCAC-C--TTTAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTCTCGGCTCAG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CGCCTCCAACGGTGTCTTTGGCTCAAAGTTCGTGACGATTTGTGTGACGGGTGAGATT-CC-----GGC--TA--------------AGGA--TG------------------TTC----TTAAGTAAAGTT--AGTTTAC----------TAAATTGTT-----------------------------------------------------CT--CCCTCT--TTTAGGGGATAAAACCAAACAAGTGCACATGGAGGGCTATGCGGTCTCGGCTCAG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TGCCTCCAACGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACGGGTAAGCAG-CTCTTCAGGT--TG--------------A-----TT------------------CTC---CTC-AA-----T----------------TTATTTAA-----------------------------------------TGTTAT------GCTGATT--TCACAT--TTCAGGAGATAAAACCAAACAGGTGCACATGGAGGGCTATGCGGTGTCCGCTCAG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TGCCTCCAATGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACAGGTAAGCTC--T-----GAT--TG--------------ATCT---T--------------------TCTCGTTA-TGT--AA---------------CATAT----------CT-----------------------------------CAAT------GCTGCTT--TCACAT--TTCAGGAGATAAAACCAAACAAGTGCACATGGAGGGCTATGCGGTCTCCGCTCAG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGCCTCCAACGGCGTCTTTGGCTCAAAGTTCGTGACTATTTGTGTGACGGGTAAGATT-GA-----G-T-TAA--------------A-----CTCCTTT-------------C--------------TGTG-T-ATTTATTAAAACGTAT----------TT---------------------------------------AA---------TT--GTAAAT--TGCAGGAGATAAAACCAAACAAGTTCACATGGAAGGCTACGCAGTTTCGGCTCAG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TGCCTCCAATGGCGTCTTTGGCTCAAAGTTCGTGACCATTTGTGTGACGGGTAAGCAT-AT-----AGT--GTGGCAT-----------------CCTCT-------------C--------------TGTTCTAGTTTTT----------TAAA-----------------------------------------TTTTGT------GTTCCTT--TTGTTT--TTTAGGAGATAAAACCAAACAAGTGCACATGGAAGGCTATGCGGTATCGGCTCAG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TGCCTCGAACGGTGTATTCGGCTCAAAATTCGTGACTATTTGTGTGACGGGTAAGTGG-GA----------------TCTC-----------------T-----------------------A----------------------------------------CTCTTCCTAGACCTAATGGAAATTACTTTATCT-----------------TTTCGTTAAT--TTTAGGAGATAATACCAAACAAGTGCACATGGAAGGATATGCTGTATCGGCCCAG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGATAT...............	23	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................AAGTGCACATGGAAGGATATGCTGTA.........	26	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................................AAACAAGTGCACATGGAAGGATATGC.............	26	1	1.00	1	0	0	0	0	1	0
..........................................................................................................................................................................................................................................................CACATGGAAGGATATGCTGTATCG......	24	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................................................................................ACAAGTGCACATGGAAGGATA................	21	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................AAGTGCACATGGAAGGATA................	19	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................ACAAGTGCACATGGAAGGATATGC.............	24	1	1.00	1	0	0	0	0	1	0
......................................................................................................................................................................................................................................................AGTGCACATGGAAGGATA................	18	1	1.00	1	0	0	0	0	0	1
TGCCTCGAACGGTGTATTCGGCTCA...............................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAGGATATGCTGTATCGGCCCA.	23	1	1.00	1	1	0	0	0	0	0
.....CGAACGGTGTATTCGGCTC................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.............................TCGTGACTATTTGTGTGACG.......................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................GTGCACATGGAAGGATATGCT............	21	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................AAGTGCACATGGAAGGATATG..............	21	1	1.00	1	0	0	0	0	0	1
....TCGAACGGTGTATTCGGCTC................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................AAGTGCACATGGAAGGATAT...............	20	1	1.00	1	0	0	0	0	1	0
..........................AATTCGTGACTATTTGTGTGACG.......................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTGCACATGGAAGGA..................	20	1	1.00	1	0	0	0	0	1	0

droBip1

TGCCTCAAACGGCGTCTTTGGCTCAAAATTCGTGACTATATGTGTGACGGGTAAGTGG-AA----------------TCTT-----------------T-----------------------A----------------------------------------CTTTTCCTAGGCCCTTTAGAAGTTAAAAAA---TCTT-------------TT--GATTAT--TTTAGGAGATAATACCAAGCAAGTGCACATGGAAGGATATGCTGTTTCGGCCCAG	Size	Hit Count	Total Norm	Total
No Reads

dp5

TGCCTCAAATGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACGGGTAAGTGTTTT-----CCA--TC--------------ACT---CG------------------CT--------------------------------------------------TTTCATCGAGC--------ACTAATCTGACATTCCATAT---------------GC-A--TTTAGGAGATAAAACCAAACAAGTACATATGGAGGGATATGCGGTGTCTGCCCAG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................TGTGACCATTTGTGTGACGGGAG...................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	2	0	0	0
...............................................................................................................................................................................................................................................................GGAGGGATATGCGGTGTC.......	18	1	2.00	2	0	0	0	0	0	0	0	0	2	0
......................................................................................................................................................................................................................................................AGTACATATGGAGGGATATG..............	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0
....TCAAATGGCGTCTTTGGCTCAAAGT...........................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	2	0
..........................................................................................................................................................................................................................................................CATATGGAGGGATATGCGGTGTC.......	23	1	2.00	2	0	1	0	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................TATGGAGGGATATGCGGTGTC.......	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCTGC....	20	1	2.00	2	0	1	0	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................TGGAGGGATATGCGGTGTCT......	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........ATGGCGTCTTTGGCTCAAAGTTTGT.......................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................GTTTGTGACCATTTGTGTGACGGGAG...................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0
............................TTTGTGACCATTTGTGTGACGG......................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAAGTACATATGGAGGGATATGCGG...........	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................GTGACCATTTGTGTGACGGGA....................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................TATGGAGGGATATGCGGTGTCT......	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0
..........................AGTTTGTGACCATTTGTGTGACG.......................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................ACCAAACAAGTACATATGGAGGG...................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCTG.....	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................ATGGAGGGATATGCGGTGTC.......	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAAGTACATATGGAGGGATA................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0
...........................GTTTGTGACCATTTGTGTGACG.......................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....CAAATGGCGTCTTTGGCTC................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................GTTTGTGACCATTTGTGTGACGGG.....................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..CCTCAAATGGCGTCTTTGGCT.................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
................................TGACCATTTGTGTGACGGG.....................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................GACCATTTGTGTGACGGGAG...................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................TGGAGGGATATGCGGTGTCTG.....	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.......AATGGCGTCTTTGGCTCAA..............................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................GCTCAAAGTTTGTGACCATTTG..............................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...CTCAAATGGCGTCTTTGGCTC................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......AATGGCGTCTTTGGCTCAAAGTTTGTGAC....................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..............................TGTGACCATTTGTGTGACGGGA....................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTACATATGGAGGGAT.................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................GTTTGTGACCATTTGTGTGACGGGA....................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................ACCAAACAAGTACATATGGAGGGA..................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.........................AAGTTTGTGACCATTTGTGT...........................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TGGAGGGATATGCGGTGTC.......	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..........................AGTTTGTGACCATTTGTGTGAC........................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................ACCATTTGTGTGACGGGAG...................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	1	0	0	0

droPer2

TGCCTCAAATGGCGTCTTTGGCTCAAAGTTTGTGACCATTTGTGTGACGGGTAAGTGTTTT-----CCA--TC--------------ACT---CG------------------GT--------------------------------------------------TTTCATCGAGC--------AGTAATCTGACATTCCATAT---------------GC-A--CTTAGGAGATCAAACCAAACAAGTACATATGGAGGGATATGCGGTGTCTGCCCAG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
............................................................................................................................................................................................................................................................TATGGAGGGATATGCGGTGTCT......	22	1	4.00	4	0	0	0	0	0	4
..............................................................................................................................................................................................................................................................TGGAGGGATATGCGGTGTC.......	19	1	3.00	3	0	0	0	0	0	3
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCTGC....	20	1	3.00	3	0	0	0	0	0	3
...............................................................................................................................................................................................................................................................GGAGGGATATGCGGTGTCTGCCCA.	24	1	3.00	3	0	0	0	0	0	3
.....................................................................................................................................................................................................................................................AAGTACATATGGAGGGATA................	19	1	3.00	3	0	2	0	0	0	1
............................................................................................................................................................................................................................................................TATGGAGGGATATGCGGTGTC.......	21	1	2.00	2	0	0	0	0	0	2
..............................................................................................................................................................................................................................................................TGGAGGGATATGCGGTGTCTGCCC..	24	1	2.00	2	0	0	0	0	0	2
.................................................................................................................................................................................................................................................AAACAAGTACATATGGAGGGATA................	23	1	2.00	2	0	1	0	0	0	1
..................................................................................................................................................................................................................................................AACAAGTACATATGGAGGGATA................	22	1	2.00	2	0	0	0	0	0	2
............................................................................................................................................................................................................................................................TATGGAGGGATATGCGGT..........	18	1	2.00	2	0	0	0	0	0	2
..............................................................................................................................................................................................................................................................TGGAGGGATATGCGGTGT........	18	1	2.00	2	0	0	0	0	0	2
...............................GTGACCATTTGTGTGACGGGAG...................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	2
..............................................................................................................................................................................................................................................................TGGAGGGATATGCGGTGTCT......	20	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCTGCCC..	22	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................GGAGGGATATGCGGTGTCTGCCC..	23	1	1.00	1	0	0	0	0	0	1
.........................AAGTTTGTGACCATTTGTGTGACGGG.....................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................AGTACATATGGAGGGATATGCGGTGTCT......	28	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................GTACATATGGAGGGATATGCGGTGTC.......	26	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................GGAGGGATATGCGGTGTC.......	18	1	1.00	1	0	0	0	0	0	1
TGCCTCAAATGGCGTCTTTGGCTCA...............................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................TATGGAGGGATATGCGGTGT........	20	1	1.00	1	0	0	0	0	0	1
.............................................................................................................................................................................................................................................................ATGGAGGGATATGCGGTGTCT......	21	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCTG.....	19	1	1.00	1	0	1	0	0	0	0
.........................AAGTTTGTGACCATTTGTGT...........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
.................................GACCATTTGTGTGACGGGA....................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0
.......AATGGCGTCTTTGGCTCAAAGT...........................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................ATGGAGGGATATGCGGTGTCTGCC...	24	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................AAACAAGTACATATGGAGGGA..................	21	1	1.00	1	0	1	0	0	0	0
................TTTGGCTCAAAGTTTGTGACCA..................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.............................TTGTGACCATTTGTGTGACGGGA....................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................ATATGGAGGGATATGCGGTGTC.......	22	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................................TATGGAGGGATATGCGGTGTCTGCCCA.	27	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCTGCCCA.	23	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTACATATGGAGGGA..................	20	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................ATGGAGGGATATGCGGTGTC.......	20	1	1.00	1	0	0	0	0	0	1
.........................AAGTTTGTGACCATTTGTGTGACG.......................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................................................CATATGGAGGGATATGCGGTGT........	22	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................ATATGGAGGGATATGCGGT..........	19	1	1.00	1	0	0	0	0	0	1
..........................AGTTTGTGACCATTTGTGTGACGGGA....................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
.................................GACCATTTGTGTGACGGGAG...................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................ACCAAACAAGTACATATGGAGGGATA................	26	1	1.00	1	0	1	0	0	0	0
..........................AGTTTGTGACCATTTGTGTGACGGGAG...................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCT......	18	1	1.00	1	0	0	0	0	0	1
........................................TGTGTGACGGGTAAGTGTTTT-----......................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................GGAGGGATATGCGGTGTCTGCC...	22	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................GATATGCGGTGTCTGCCC..	18	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................ATGGAGGGATATGCGGTGTCTGCCC..	25	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................................................................GAGGGATATGCGGTGTCTGCC...	21	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................GGAGGGATATGCGGTGTCT......	19	1	1.00	1	0	0	0	0	0	1
...........................GTTTGTGACCATTTGTGTGACGGGA....................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
.......................CAAAGTTTGTGACCATTTGT.............................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0

droWil2

TGCCACAAATGGCGTTTTTGGATCAAAATTTGTGACTATTTGTGTAACAGGTGAGTACTTT-----TC---------TCTCATAGCAA-----T--------ATGGATTAATCTAT-----------------------TG---------------------------------------------------------CAAT-T------GGAAT--TTATATTGTGCAGGCGATCAAACGAAACAAGTTCATATGGAAGGTTATGCTGTCTCTGCTCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................................................................................................................................................................................................AAGTTCATATGGAAGGTTATGCT............	23	1	3.00	3	0	0	3	0	0
.............................................................................................................................................................................................................................................................ATGGAAGGTTATGCTGTCTCTGCT...	24	1	2.00	2	2	0	0	0	0
..................................................................................................................................................................................................................................................AACAAGTTCATATGGAAGGTTATGCT............	26	1	2.00	2	0	0	2	0	0
...............TTTTGGATCAAAATTTGTGACT...................................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0
...........................ATTTGTGACTATTTGTGTAACG.......................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0
...........................ATTTGTGACTATTTGTGTAACAGGC....................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................ATATGGAAGGTTATGCTGT..........	19	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................TATGGAAGGTTATGCTGTC.........	19	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................................................................................................TTCATATGGAAGGTTATGCTGT..........	22	1	1.00	1	0	1	0	0	0
..............................TGTGACTATTTGTGTAACAGGC....................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................GAAACAAGTTCATATGGAAGGTTATGCT............	28	1	1.00	1	0	0	1	0	0
...............TTTTGGATCAAAATTTGTGACC...................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0
.....................ATCAAAATTTGTGACTATTTGTGTAACA.......................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................................................AGTTCATATGGAAGGTTATGCT............	22	1	1.00	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................CATATGGAAGGTTATGCTGT..........	20	1	1.00	1	0	0	1	0	0
..............TTTTTGGATCAAAATTTGTGACT...................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0

droVir3

TGCCACAAATGGCACTTTCGGCTCCAAATTTGTGACCATATGTGTGACTGGTGAGTGT-TA-----GAT--GAAATA----------ACAATACCCAGCC-------------T--------------TATT-C-ATATAC----------TATATTCTTCTT---------------------------------------TA---------AT--CTCTTT--AAAAGGTGATCAAACAAAACAGGTGCACATGGAAGGCTATGCTGTGTCCGCTCAG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..................................................................................................................................................................................................................................................AACAGGTGCACATGGAAGGCT.................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................AGGTGCACATGGAAGGCT.................	18	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TGCACATGGAAGGCTATGCT............	20	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAAGGCTA................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................ATATGTGTGACTGGTGAT.................................................................................................................................................................................................................................	18	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAAGGCT.................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................TTTGTGACCATATGTGTGACTGGTGATC................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................ATATGTGTGACTGGTGATC................................................................................................................................................................................................................................	19	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................TTCGGCTCCAAATTTGTG......................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................GACCATATGTGTGACTGGTGATC................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AGGTGCACATGGAAGGCTATGCT............	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................GGTGATCAAACAAAACAG.................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GGTGCACATGGAAGGCTATGCTGTGTCC......	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................ACAAAACAGGTGCACATGGAAGGC..................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TGACCATATGTGTGACTGGTGAT.................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TTGTGACCATATGTGTGAC........................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AACAGGTGCACATGGAAG....................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TGGAAGGCTATGCTGTGTCCG.....	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................CATATGTGTGACTGGTGATC................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TGCACATGGAAGGCTATGCTGTGTCCGC....	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................CAAAACAGGTGCACATGG.......................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................TGTGACCATATGTGTGACTGGTGATCA...............................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCACTTTCGGCTCCAAATTTGTGAC....................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAGGTGCACATGGAAGGCTATGCTGT..........	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AGGCTATGCTGTGTCCGCTC..	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAAGGCTATG..............	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TGGAAGGCTATGCTGTGTCCGCT...	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GGTGCACATGGAAGGCTATGCTGTG.........	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CAAATGGCACTTTCGGCTCC...............................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GGTGCACATGGAAGGCTA................	18	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAAGGC..................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAGGTGCACATGGAAGGCTAT...............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................TGTGACCATATGTGTGACT.......................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................ATTTGTGACCATATGTGTGAC........................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAACAGGTGCACATGGAA.....................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GGCACTTTCGGCTCCAAA............................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................CAAATTTGTGACCATATGTGTGACT.......................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................CAAAACAGGTGCACATGGAAGGCTAT...............	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................GGCTATGCTGTGTCCGCTC..	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......AATGGCACTTTCGGCTCCA..............................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................GGTGATCAAACAAAACAGGTGCACA..........................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TGCCACAAATGGCACTTTCGGCTCCA..............................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAGGTGCACATGGAAGGCTATG..............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TTGTGACCATATGTGTGACTGGTGATC................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AGGTGCACATGGAAGGCTATGCTGTG.........	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AACAGGTGCACATGGAAGGCTATGCT............	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................AAAACAGGTGCACATGGA......................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....ACAAATGGCACTTTCGGCTCCC..............................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................AAAACAGGTGCACATGGAAGG...................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AATTTGTGACCATATGTGTGACT.......................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CATGGAAGGCTATGCTGTGTC.......	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CAAATGGCACTTTCGGCTCCA..............................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................GCACATGGAAGGCTATGCTGTGTCCG.....	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AAATGGCACTTTCGGCTCCAAATTTGT.......................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................ACAGGTGCACATGGAAGGCT.................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAGGTGCACATGGAAGGCT.................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AGGCTATGCTGTGTCCGCTCAG	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CCACAAATGGCACTTTCGGCTCC...............................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TGCCACAAATGGCACTTTCGGCTCCAAAT...........................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................ACATGGAAGGCTATGCTGTGTCCG.....	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................ATATGTGTGACTGGTGATCA...............................................................................................................................................................................................................................	20	10	0.30	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TGCCACAAATGGCACATTCGGCTCTAAATTTGTAACAATTTGTGTAACTGGTGAGTTT-AG------CT--TA--------------ATGA---T--------------------TATAAGTA-TT--TATG-T-ATATATAAAAACATTT-----AT--------------------------------------------ATTTATACGTTGT--GCGTTT--GTCAGGTGATCAAACCAAGCAGGTGCACATGGAGGGTTACGCTGTTTCCGCTCAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.................................................................................................................................................................................................................................................AAGCAGGTGCACATGGAGGGTTACGC.............	26	1	2.00	2	1	0	0	0	0	1
.....................................ATTTGTGTAACTGGTGATC................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
TGCCACAAATGGCACATTCGGCTCTAAA............................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGAGGGTTACGCTGTTTCC......	19	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................CCAAGCAGGTGCACATGGAGG....................	21	1	1.00	1	0	0	0	0	0	1
..................................................................................................................................................................................................................................................AGCAGGTGCACATGGAGGGTTACG..............	24	1	1.00	1	0	0	0	0	0	1
.............................TTGTAACAATTTGTGTAACTGGTG...................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................CATGGAGGGTTACGCTGTTTCCGCTCA.	27	1	1.00	1	1	0	0	0	0	0
.............ACATTCGGCTCTAAATTTGTAACA...................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................GCACATGGAGGGTTACGCT............	19	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................AAGCAGGTGCACATGGAGGGT..................	21	1	1.00	1	0	0	0	0	0	1
.................................AACAATTTGTGTAACTGGTG...................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0

droGri2

TGCCACAAACGGCACCTTTGGCTCCAAATTTGTAACCATTTGTGTGACTGGTGAGTGT-AG-----TA----A--------------ACAATAT-CTTATCAATGGCTTG-----------A-------ATTGTAGCTTAT----------TATA-----------------------------------------TCTGCT-----------AT--TCTTTG--AACAGGTGATCAGACCAAACAGGTGCACATGGAGGGCTATGCTGTGTCCGCTCAG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dse_819

scaffold_13:234710-234771 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads