ID:

dse_8

 Coordinate:

scaffold_13:202537-202604 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

antisense_to_intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.2 -39.2 -39.1

Flybase annnotation

Antisense to intron [Dsec\GM10251-in]; utr3 [utr3_minus_8785]

No Repeatable elements found

Sense Strand Reads

TTTGAAAAGGATATATGCATATATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGACAGGAAAACCTGAGAAAAAC

***********************************.((((((((.((.((.((.(((((((((.((((((((((((((.......)))))))..))))))))).))))))).)).)).)).))))))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V115

head

 V114

embryo

 V113

male body		 M054

female body
..................................................ATATTGTCCTGTCACAGCAGT................................................................................................. 21 0 1 45317.00 45317 33765 6045 4696 811
..................................................ATATTGTCCTGTCACAGCAGTA................................................................................................ 22 0 1 10064.00 10064 3602 5906 136 420
..................................................ATATTGTCCTGTCACAGCAG.................................................................................................. 20 0 1 5979.00 5979 5349 75 204 351
..................................................ATATTGTCCTGTCACAGCA................................................................................................... 19 0 1 3172.00 3172 3130 19 0 23
..................................................ATATTGTCCTGTCACAGCAGTT................................................................................................ 22 1 1 1908.00 1908 1779 19 77 33
..................................................ATATTGTCCTGTCACAGCAGTAA............................................................................................... 23 1 1 480.00 480 337 97 15 31
..................................................ATATTGTCCTGTCACAGCAGA................................................................................................. 21 1 1 401.00 401 384 1 12 4
...................................................TATTGTCCTGTCACAGCAGT................................................................................................. 20 0 1 389.00 389 253 34 29 73
...................................................TATTGTCCTGTCACAGCAGTA................................................................................................ 21 0 1 209.00 209 111 50 8 40
...............................................................................................CTGCTGGGTCGGGGCATTAACA................................................... 22 0 1 179.00 179 14 159 6 0
..................................................ATATTGTCCTGTCACAGCAGC................................................................................................. 21 1 1 83.00 83 70 8 5 0
..................................................ATATTGTCCTGTCACAGCCGT................................................................................................. 21 1 1 72.00 72 26 3 43 0
..................................................ATATTGTCCTGTCACAGCGGT................................................................................................. 21 1 1 72.00 72 28 15 28 1
..................................................ACATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 72.00 72 44 21 7 0
..................................................ATATTGTCCTGTCACAGCAGTAT............................................................................................... 23 0 1 64.00 64 32 8 0 24
..................................................ATATTGTCCCGTCACAGCAGT................................................................................................. 21 1 1 64.00 64 42 16 5 1
....................................................ATTGTCCTGTCACAGCAGT................................................................................................. 19 0 1 57.00 57 27 24 1 5
..................................................ATATTGTCCTGTCACGGCAGT................................................................................................. 21 1 1 55.00 55 38 12 5 0
..................................................ATATTTTCCTGTCACAGCAGT................................................................................................. 21 1 1 52.00 52 37 10 4 1
..................................................ATATTGACCTGTCACAGCAGT................................................................................................. 21 1 1 51.00 51 49 1 1 0
..................................................ATATTGTCCTGCCACAGCAGT................................................................................................. 21 1 1 51.00 51 39 7 5 0
..................................................ATATTGCCCTGTCACAGCAGT................................................................................................. 21 1 1 51.00 51 33 8 10 0
..................................................ATATTGTACTGTCACAGCAGT................................................................................................. 21 1 1 51.00 51 48 0 2 1
.................................................CATATTGTCCTGTCACAGCAGT................................................................................................. 22 1 1 50.00 50 46 1 1 2
..................................................ATATTGTTCTGTCACAGCAGTA................................................................................................ 22 1 1 50.00 50 2 48 0 0
..................................................ATATTATCCTGTCACAGCAGT................................................................................................. 21 1 1 47.00 47 39 5 3 0
..................................................ATATTGTCCTGTCGCAGCAGT................................................................................................. 21 1 1 47.00 47 32 10 5 0
...................................................TATTGTCCTGTCACAGCAG.................................................................................................. 19 0 1 47.00 47 27 0 0 20
..................................................ATATTGTCCTGTCACCGCAGT................................................................................................. 21 1 1 46.00 46 35 9 2 0
..................................................ACATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 46.00 46 5 40 0 1
....................................................ATTGTCCTGTCACAGCAGTA................................................................................................ 20 0 1 46.00 46 8 35 1 2
..................................................ATATTGTCCTGTCATAGCAGT................................................................................................. 21 1 1 43.00 43 26 12 5 0
..................................................GTATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 42.00 42 27 13 2 0
..................................................ATATTGTCATGTCACAGCAGT................................................................................................. 21 1 1 39.00 39 32 3 3 1
..................................................ATACTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 38.00 38 28 7 3 0
..................................................ATATTGTCCTGTTACAGCAGT................................................................................................. 21 1 1 37.00 37 16 20 1 0
..................................................ATATTGTCCTGTCATAGCAGTA................................................................................................ 22 1 1 37.00 37 7 30 0 0
..................................................ATATTGTCCTGTCACAGCAAT................................................................................................. 21 1 1 37.00 37 34 3 0 0
..................................................ATATTGTCCTGTCACAGCAGTC................................................................................................ 22 1 1 36.00 36 24 5 7 0
..................................................ATATTGTCCTGTCACAGC.................................................................................................... 18 0 1 36.00 36 31 1 0 4
..................................................ATATTGTTCTGTCACAGCAGT................................................................................................. 21 1 1 35.00 35 14 18 3 0
..................................................ATATTGTCCTGTCACAGAAGT................................................................................................. 21 1 1 35.00 35 30 1 1 3
..................................................ATATTGTCCTGTCACAGCTGT................................................................................................. 21 1 1 35.00 35 4 1 30 0
..................................................ATATTGTCCTGTCACATCAGT................................................................................................. 21 1 1 32.00 32 25 3 2 2
..................................................ATCTTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 31.00 31 17 5 9 0
..................................................ATATCGTCCTGTCACAGCAGT................................................................................................. 21 1 1 31.00 31 17 9 5 0
..................................................ATATTCTCCTGTCACAGCAGT................................................................................................. 21 1 1 30.00 30 22 7 1 0
...................................................TATTGTCCTGTCACAGCAGTT................................................................................................ 21 1 1 28.00 28 28 0 0 0
..................................................ATATTGTCCTGTCACACCAGT................................................................................................. 21 1 1 28.00 28 20 5 3 0
..................................................AAATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 28.00 28 28 0 0 0
..................................................ATATTGTCCTGTCACAGCAGG................................................................................................. 21 1 1 28.00 28 14 2 0 12
..................................................ATATTGTCCTGTCACAGCAGTAAA.............................................................................................. 24 2 1 27.00 27 24 0 3 0
..................................................ATATTGTCCTGTCACAGTAGT................................................................................................. 21 1 1 27.00 27 18 7 2 0
..................................................ATATTGTCCTGTCACAGCAGTTT............................................................................................... 23 1 1 26.00 26 22 0 0 4
..................................................ATATTGTCCTCTCACAGCAGT................................................................................................. 21 1 1 26.00 26 24 1 1 0
..................................................ATATTGTCCTATCACAGCAGT................................................................................................. 21 1 1 26.00 26 22 1 3 0
..................................................ATATTGTCCAGTCACAGCAGT................................................................................................. 21 1 1 26.00 26 25 1 0 0
..................................................ATATTGTCCTGTCACAGCACT................................................................................................. 21 1 1 26.00 26 22 1 3 0
..................................................ATATTGTCTTGTCACAGCAGT................................................................................................. 21 1 1 26.00 26 14 10 2 0
..................................................ATATTGTCCTGTTACAGCAGTA................................................................................................ 22 1 1 24.00 24 1 23 0 0
..................................................ATGTTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 24.00 24 16 5 3 0
..................................................ATATTGTCCTGTCACAGCATT................................................................................................. 21 1 1 22.00 22 13 4 1 4
..................................................ATATTGTCCTGTCACAGCAA.................................................................................................. 20 1 1 22.00 22 21 0 0 1
..................................................ATAATGTCCTGTCACAGCAGT................................................................................................. 21 1 1 20.00 20 16 3 1 0
..................................................ATATTGTCCTGTCCCAGCAGT................................................................................................. 21 1 1 20.00 20 15 3 2 0
..................................................ATATTGTCCTTTCACAGCAGT................................................................................................. 21 1 1 20.00 20 17 2 1 0
....................................................ATATTCCTGTCACAGCAGT................................................................................................. 19 2 1 19.00 19 13 3 2 1
..................................................ATATTGTCCTGTCAAAGCAGT................................................................................................. 21 1 1 18.00 18 15 3 0 0
..................................................ATATTGTCCTGCCACAGCAGTA................................................................................................ 22 1 1 17.00 17 2 13 2 0
..................................................ATATTCTCCTGTCACAGCAGTA................................................................................................ 22 1 1 17.00 17 5 11 0 1
..................................................ATATTGTCCTGTCACAACAGT................................................................................................. 21 1 1 17.00 17 10 6 1 0
..................................................ATATTGTCCTGTCACAGCAGTG................................................................................................ 22 1 1 16.00 16 4 12 0 0
..................................................ATATTGTCCTGTCACACCAG.................................................................................................. 20 1 1 15.00 15 11 1 2 1
...............................................................................................CTGCTGGGTCGGGGCATTAAC.................................................... 21 0 1 15.00 15 2 13 0 0
..................................................ATATTGCCCTGTCACAGCAGTA................................................................................................ 22 1 1 15.00 15 4 7 0 4
..................................................ATATTGTCCTGACACAGCAGT................................................................................................. 21 1 1 15.00 15 6 6 1 2
..................................................ATATTGTCCTGTCACAGCCGTA................................................................................................ 22 1 1 14.00 14 2 9 3 0
..................................................ATATTGTCTTGTCACAGCAGTA................................................................................................ 22 1 1 13.00 13 3 10 0 0
..................................................ATATAGTCCTGTCACAGCAGT................................................................................................. 21 1 1 13.00 13 12 1 0 0
..................................................ATATTGTCCTGTCACATCAG.................................................................................................. 20 1 1 13.00 13 12 0 0 1
..................................................ATATTGTCCTGTCACATCAGTA................................................................................................ 22 1 1 13.00 13 7 6 0 0
..................................................ATATTGTCCTGTCACAGCCG.................................................................................................. 20 1 1 13.00 13 10 1 2 0
..................................................ATATTGTCCTGTCACAGCGGTA................................................................................................ 22 1 1 13.00 13 7 6 0 0
..................................................ATATTGTCATGTCACAGCAGTA................................................................................................ 22 1 1 13.00 13 6 2 0 5
..................................................ATGTTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 13.00 13 6 7 0 0
..................................................ATATTGTCCTGTCACTGCAGT................................................................................................. 21 1 1 12.00 12 3 8 0 1
..................................................ATATTGTCCTGCCACAGCAG.................................................................................................. 20 1 1 12.00 12 12 0 0 0
..................................................ATATTGTCCTGTCACACCAGTA................................................................................................ 22 1 1 12.00 12 2 10 0 0
..................................................ATATTGTCCTGTCGCAGCAGTA................................................................................................ 22 1 1 12.00 12 2 10 0 0
..................................................ATATTATCCTGTCACAGCAG.................................................................................................. 20 1 1 12.00 12 12 0 0 0
..................................................ATTTTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 12.00 12 8 4 0 0
..................................................ATATTGTGCTGTCACAGCAGT................................................................................................. 21 1 1 11.00 11 10 0 1 0
..................................................ATTTTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 10.00 10 0 10 0 0
..................................................ATATTGTCCTGTCGCAGCAG.................................................................................................. 20 1 1 10.00 10 10 0 0 0
..................................................ATATTGTCCTGTCACAGCAGCA................................................................................................ 22 1 1 10.00 10 4 6 0 0
.................................................CATATTGTCCTGTCACAGCAGTA................................................................................................ 23 1 1 10.00 10 2 7 0 1
..................................................ATATTGTCCTGTCACAGTAGTA................................................................................................ 22 1 1 10.00 10 3 7 0 0
..................................................ATATTGTCCTGTCACAGT.................................................................................................... 18 1 1 10.00 10 10 0 0 0
..................................................ATATTGTACTGTCACAGCAG.................................................................................................. 20 1 1 9.00 9 8 0 0 1
..................................................ATATCGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 9.00 9 2 7 0 0
..................................................TTATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 9.00 9 6 2 0 1
..................................................ATATTGTCCTGTCACAGCAT.................................................................................................. 20 1 1 9.00 9 6 0 1 2
..................................................ATATTGTCCTGTCTCAGCAGT................................................................................................. 21 1 1 9.00 9 5 2 0 2
..................................................ATATTGTCCTGTCACAGCACTA................................................................................................ 22 1 1 9.00 9 3 6 0 0
..................................................ATATTGTCCTGTCACAGCATTA................................................................................................ 22 1 1 9.00 9 1 6 0 2
..................................................ATATTGTCCTGTCACAACAG.................................................................................................. 20 1 1 9.00 9 9 0 0 0
..................................................ATATTGTACTGTCACAGCAGTA................................................................................................ 22 1 1 9.00 9 8 0 0 1
..................................................AAAATGTCCTGTCACAGCAGT................................................................................................. 21 2 1 9.00 9 8 1 0 0
...................................................TATTGTCCTGTCACAGCAGTAA............................................................................................... 22 1 1 8.00 8 6 0 0 2
..................................................ATATTGTCCTGTCAAAGCAGTA................................................................................................ 22 1 1 8.00 8 4 4 0 0
..................................................ATATTGTCCTGTCACAGCAGTAC............................................................................................... 23 1 1 8.00 8 5 1 0 2
..................................................ATATTGTCCAGTCACAGCAG.................................................................................................. 20 1 1 8.00 8 7 1 0 0
..................................................ATATTGTCCTGTCACGGCAGTA................................................................................................ 22 1 1 8.00 8 2 6 0 0
..................................................ATATTGTCCTGTAACAGCAGT................................................................................................. 21 1 1 8.00 8 7 0 1 0
...............................................................................................CTGCTGGGTCGGGGCATTA...................................................... 19 0 1 8.00 8 1 6 0 1
..................................................ATATTGTCCCGTCACAGCAGTA................................................................................................ 22 1 1 8.00 8 1 7 0 0
..................................................ATATTGTCCTGTCACAGCAGTGT............................................................................................... 23 1 1 7.00 7 7 0 0 0
..................................................ATACTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 7.00 7 1 6 0 0
..................................................ATATTATCCTGTCACAGCAGTA................................................................................................ 22 1 1 7.00 7 5 2 0 0
..................................................ATATTGTCCTGTCACAACAGTA................................................................................................ 22 1 1 7.00 7 3 2 0 2
...................................................TATTGTCCTGTCACAGCA................................................................................................... 18 0 1 7.00 7 4 1 0 2
..................................................ATATTGTACTGTCACAGCA................................................................................................... 19 1 1 7.00 7 7 0 0 0
..................................................ATATTATCCTGTCACAGCA................................................................................................... 19 1 1 7.00 7 7 0 0 0
..................................................ATATTGTCCTGTCACTGCAGTA................................................................................................ 22 1 1 7.00 7 0 6 0 1
..................................................ATATTGTCCTGTCACCGCAGTA................................................................................................ 22 1 1 7.00 7 4 3 0 0
..................................................ATATTGACCTGTCACAGCA................................................................................................... 19 1 1 7.00 7 7 0 0 0
..................................................ATATTGTCCTGTCACAGCTGTA................................................................................................ 22 1 1 7.00 7 0 6 1 0
..................................................ATATTCTCCTGTCACAGCAG.................................................................................................. 20 1 1 7.00 7 6 0 1 0
..................................................ATATTGTCCTGTCACAGCGG.................................................................................................. 20 1 1 7.00 7 5 0 1 1
..................................................ATATTGTCCAGTCACAGCAGTA................................................................................................ 22 1 1 7.00 7 2 5 0 0
..................................................CTATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 7.00 7 6 0 1 0
..................................................ATATTGTCCTGTCACAGCAGTAG............................................................................................... 23 1 1 7.00 7 5 1 0 1
..................................................ATATTGACCTGTCACAGCAG.................................................................................................. 20 1 1 7.00 7 7 0 0 0
..................................................ATAATGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 7.00 7 6 1 0 0
..................................................ATATTGACCTGTCACAGCAGTA................................................................................................ 22 1 1 7.00 7 6 1 0 0
..................................................GTATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 6.00 6 3 3 0 0
..................................................ATATTGTCCTGTCACAGCAATA................................................................................................ 22 1 1 6.00 6 4 2 0 0
..................................................ATATTGTCCTGTCACAGCATA................................................................................................. 21 2 1 6.00 6 2 1 0 3
..................................................ATATTGTCCTGTTACAGCAG.................................................................................................. 20 1 1 6.00 6 6 0 0 0
..................................................ATATTTTCCTGTCACAGCAGTA................................................................................................ 22 1 1 6.00 6 4 2 0 0
..................................................ATATTTTCCTGTCACAGCAG.................................................................................................. 20 1 1 6.00 6 6 0 0 0
...................................................TATTGTCCTGTCACAGCAGTAT............................................................................................... 22 0 1 6.00 6 0 2 0 4
..................................................ATATTGTCCTGTCACAGCAGGA................................................................................................ 22 1 1 6.00 6 1 1 0 4
..................................................ATATTGTCCTGTCACGGCAG.................................................................................................. 20 1 1 6.00 6 6 0 0 0
...................................................ATTTGTCCTGTCACAGCAGT................................................................................................. 20 2 1 6.00 6 2 4 0 0
..................................................ATATTGCCCTGTCACAGCA................................................................................................... 19 1 1 6.00 6 6 0 0 0
........................................................................TTGTAACACTATATTATAGTTTA......................................................................... 23 0 1 5.00 5 1 4 0 0
..................................................ATATTGTCATGTCACAGCA................................................................................................... 19 1 1 5.00 5 5 0 0 0
..................................................ACATTGTCCTGTCACAGCA................................................................................................... 19 1 1 5.00 5 5 0 0 0
..................................................ATATTGTCGTGTCACAGCAGT................................................................................................. 21 1 1 5.00 5 3 1 0 1
..................................................ATATTGTCCCGTCACAGCAG.................................................................................................. 20 1 1 5.00 5 5 0 0 0
..................................................ATATTGTCCTGTCAGAGCAGT................................................................................................. 21 1 1 5.00 5 3 2 0 0
...................................................ATTTGTCCTGTCACAGCAGTA................................................................................................ 21 2 1 5.00 5 1 4 0 0
..................................................ATATTGTCCTGTCACAGAAG.................................................................................................. 20 1 1 5.00 5 4 0 0 1
..................................................ATATTGTCCTATCACAGCAGTA................................................................................................ 22 1 1 5.00 5 1 4 0 0
..................................................ATATGGTCCTGTCACAGCAGT................................................................................................. 21 1 1 5.00 5 5 0 0 0
..................................................ATATTTTCCTGTCACAGCA................................................................................................... 19 1 2 5.00 10 10 0 0 0
..................................................ATATTGTCCTGTCACATCA................................................................................................... 19 1 1 5.00 5 5 0 0 0
..................................................ATATTGTCATGTCACAGCAG.................................................................................................. 20 1 1 5.00 5 4 0 0 1
..................................................ATATTGTCAAGTCACAGCAGT................................................................................................. 21 2 1 5.00 5 5 0 0 0
..................................................ATATTGTCCTGTCCCAGCAGTA................................................................................................ 22 1 1 5.00 5 2 3 0 0
..................................................ATATTGTCCTGTCACAGCT................................................................................................... 19 1 2 4.50 9 9 0 0 0
..................................................ATATTGTCCTATCACAGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0
..................................................AAATTGTCCTGTCACAGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTTACAGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0
..................................................ATAGTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 4.00 4 3 0 0 1
..................................................ATATTGTCATGTCACAGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0
..................................................ATATGGTCCTGTCACAGCAGA................................................................................................. 21 2 1 4.00 4 4 0 0 0
..................................................ATATCGTCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTAACAGCAGTA................................................................................................ 22 1 1 4.00 4 1 3 0 0
..................................................ATATTGCCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTCACAGAAGTA................................................................................................ 22 1 1 4.00 4 4 0 0 0
..................................................GTATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTCACGGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTCACAGTAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0
..................................................GTATTGTCCTGTCACAGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTCACCGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0
...............................................................................................CTGCTGGGTCGGGGCATTT...................................................... 19 1 1 4.00 4 4 0 0 0
....................................................ATATTCCTGTCACAGCAGTA................................................................................................ 20 2 1 4.00 4 1 3 0 0
.....................................................TTGTCCTGTCACAGCAGTA................................................................................................ 19 0 1 4.00 4 2 1 0 1
..................................................ATATTGTCCTCTCACAGCAGTA................................................................................................ 22 1 1 4.00 4 0 4 0 0
..................................................ATATTGGCCTGTCACAGCAGT................................................................................................. 21 1 1 4.00 4 1 2 1 0
.................................................CATATTGTCCTGTCACAGCA................................................................................................... 20 1 1 4.00 4 4 0 0 0
.................................................CATATTGTCCTGTCACAGCAG.................................................................................................. 21 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTCACAGCAGTTA............................................................................................... 23 2 1 4.00 4 1 0 0 3
..................................................ATATTATCCTGTCACAGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0
....................................................ATTGTCCTGTCACAGCAG.................................................................................................. 18 0 1 4.00 4 2 0 0 2
..................................................ATATTGTCCTGTCACAGCAGTGG............................................................................................... 23 2 1 4.00 4 3 0 0 1
..................................................ATATTGTCCTGTCACAGGAGT................................................................................................. 21 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCCGTCACAGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0
.....................................................TTGTCCTGTCACAGCAGT................................................................................................. 18 0 1 4.00 4 3 0 0 1
..................................................ACATTGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0
..................................................ATATCGTCCTGTCACAGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0
...............................................................................................CTGCTGGGTCGGGGCATT....................................................... 18 0 1 4.00 4 2 2 0 0
..................................................ATATTGTCCAATCACAGCAGT................................................................................................. 21 2 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTCACAGCG................................................................................................... 19 1 1 4.00 4 4 0 0 0
..................................................ACATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0
..................................................ATATTGTCCTGTCACGGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0
..................................................ATCTTGTCCTGTCACAGCA................................................................................................... 19 1 1 3.00 3 3 0 0 0
..................................................ATCTTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 3.00 3 0 2 1 0
..................................................ATATTGTCCAGTCACAGCAGA................................................................................................. 21 2 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTGTCGCAGCAGTT................................................................................................ 22 2 1 3.00 3 3 0 0 0
..................................................ATATTGCCCTGTCACAGCAGTT................................................................................................ 22 2 1 3.00 3 3 0 0 0
..................................................ATATTGTTCTGTCACAGCA................................................................................................... 19 1 1 3.00 3 3 0 0 0
..................................................ATATTGTTCTGTCACAGCAG.................................................................................................. 20 1 1 3.00 3 3 0 0 0
..................................................ATATTCTCCTGTCACAGCA................................................................................................... 19 1 1 3.00 3 3 0 0 0
..................................................ATATATTCCTGTCACAGCAGT................................................................................................. 21 2 1 3.00 3 3 0 0 0
..................................................ATATTGTCCAGTCACAGCAGTT................................................................................................ 22 2 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTGTCACAGCAGTCG............................................................................................... 23 2 1 3.00 3 2 0 1 0
..................................................ATATTGTCCTGTCACAGCAGAT................................................................................................ 22 2 1 3.00 3 3 0 0 0
.....................................................TTGTCCTGTCACAGCAGTAA............................................................................................... 20 1 1 3.00 3 2 0 0 1
..................................................ATATTGTCCTGACACAGCAGTA................................................................................................ 22 1 1 3.00 3 1 2 0 0
..................................................ATATTGTCCTGTCACAGCAGAA................................................................................................ 22 1 1 3.00 3 2 1 0 0
..................................................ATATTGTCCTGTCACAGCAGTAGA.............................................................................................. 24 2 1 3.00 3 1 1 0 1
..................................................ATATAGTCCTGTCACAGCAG.................................................................................................. 20 1 1 3.00 3 3 0 0 0
..................................................ATAATGTCCTGTCACAGCAG.................................................................................................. 20 1 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTGACACAGCAG.................................................................................................. 20 1 1 3.00 3 3 0 0 0
..................................................AAATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTGTCACCGCAG.................................................................................................. 20 1 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTGTCACTGCAG.................................................................................................. 20 1 1 3.00 3 1 0 0 2
..................................................ATATTGACCTGTCACAGCAGTT................................................................................................ 22 2 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTCTCACAGCAG.................................................................................................. 20 1 1 3.00 3 3 0 0 0
...................................................TATTGTCCTGTCACAGCCGT................................................................................................. 20 1 1 3.00 3 1 0 0 2
..................................................ATATTGTCCTGTCACAGCATTAA............................................................................................... 23 2 1 3.00 3 1 0 0 2
..................................................TTATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 3.00 3 0 1 0 2
..................................................ATATTGTCCTGTCACAGCAGTCA............................................................................................... 23 2 1 3.00 3 3 0 0 0
..................................................TTATTGTCCTGTCACAGCA................................................................................................... 19 1 1 3.00 3 3 0 0 0
..................................................ATAATGTCCTGTCACAGCA................................................................................................... 19 1 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTGTCACAGCAATT................................................................................................ 22 2 1 3.00 3 3 0 0 0
..................................................ATATTGTCCCCTCACAGCAGT................................................................................................. 21 2 1 3.00 3 2 1 0 0
..................................................AAATTGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 3.00 3 3 0 0 0
..................................................ATATTGTCCTGTCACAGCAC.................................................................................................. 20 1 1 3.00 3 2 0 0 1
.................................................ATCATTGTCCTGTCACAGCAGT................................................................................................. 22 3 2 2.50 5 1 3 1 0
..................................................ATATTGTCCTGTCATAGCAG.................................................................................................. 20 1 1 2.00 2 1 1 0 0
..................................................ATATTGTCCTGTCACACCAGC................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACTGCA................................................................................................... 19 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTTTCACAGCAGTA................................................................................................ 22 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACAGCATC................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................AGATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACACCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATACTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 2.00 2 2 0 0 0
...............................................................................................CTGCTGGGTCGGGGCATTAACAA.................................................. 23 1 1 2.00 2 1 1 0 0
..................................................ATCTTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 2.00 2 1 0 1 0
....................................................ATTGTCCTGTCACAGCAGTT................................................................................................ 20 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACAGCAGCT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACAGCCGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCACGTCACAGCAGT................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACAGCAATAT............................................................................................... 23 1 1 2.00 2 0 0 0 2
..................................................ATATTGTCCTGTCACAGCAGTCT............................................................................................... 23 1 1 2.00 2 1 0 1 0
..................................................ATATCGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCGTGTCACAGCAG.................................................................................................. 20 1 1 2.00 2 2 0 0 0
..................................................ATATTTTCCTGTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 1 0 0 1
..................................................ATATTGTCCTTTCGCAGCAGT................................................................................................. 21 2 1 2.00 2 1 0 1 0
...............................................................................................CTGCTGGGTCGGGGCATTAACT................................................... 22 1 1 2.00 2 1 1 0 0
..................................................ATATTGTCCTGTCATAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACAGTA................................................................................................... 19 1 1 2.00 2 2 0 0 0
..................................................ATATTCTCCTGTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGGCACAGCAGT................................................................................................. 21 1 1 2.00 2 0 1 1 0
..................................................ATATTGTCCTGTCACCGCCGT................................................................................................. 21 2 1 2.00 2 1 1 0 0
..................................................ATATTGTCCTGTCACAGCAGTTAA.............................................................................................. 24 3 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACAGCGTA................................................................................................. 21 3 1 2.00 2 0 2 0 0
..................................................ATATAGTCCTGTCACAGCAGA................................................................................................. 21 2 1 2.00 2 2 0 0 0
.....................................................ATGTCCTGTCACAGCAGTA................................................................................................ 19 1 1 2.00 2 0 2 0 0
..................................................ATATTGACATGTCACAGCAGT................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................ATAATGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATTTTGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATCTTGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 1 0 1 0
..................................................CTATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 2.00 2 1 1 0 0
..................................................ATATTGTCCTGTCACAGCCGA................................................................................................. 21 2 1 2.00 2 1 0 1 0
..................................................ATATTGTCCTGTCACAGCAGTTG............................................................................................... 23 2 1 2.00 2 2 0 0 0
...................................................TATTGTCCTGTCACAGCAGA................................................................................................. 20 1 1 2.00 2 1 0 0 1
....................................................ATTTTCCTGTCACAGCAGT................................................................................................. 19 1 1 2.00 2 1 1 0 0
..................................................ATATTGTCTTGTCACAGCAG.................................................................................................. 20 1 1 2.00 2 1 1 0 0
..................................................AAATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 2.00 2 2 0 0 0
......................................................TGTCCTGTCACAGCAGTA................................................................................................ 18 0 1 2.00 2 1 1 0 0
..................................................ATATTGAACTGTCACAGCAGT................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................ATACTGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................AGATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 2.00 2 1 0 0 1
..................................................ATATTGTCCTGTCCCAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................AAACTGTCCTGTCACAGCAGT................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCACTCACAGCAGT................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................CTATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 2.00 2 2 0 0 0
...............................................................................................CTGCTGGGTCGGGGCTTTAACA................................................... 22 1 1 2.00 2 0 2 0 0
..................................................ATATTGTCCTGTCCCAGCAG.................................................................................................. 20 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCTCAGCAGTA................................................................................................ 22 1 1 2.00 2 0 2 0 0
..................................................ATATTGTCCTGTCACAGCTA.................................................................................................. 20 2 2 2.00 4 2 2 0 0
..................................................ATATTGTCCTGTCACCGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATATTATCCTGTCACAGCAGTAA............................................................................................... 23 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCCGTCACAGCA................................................................................................... 19 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTCACAACAGTTT............................................................................................... 23 2 1 2.00 2 2 0 0 0
..................................................ATATTGTTCTGTTACAGCAGT................................................................................................. 21 2 1 2.00 2 1 1 0 0
..................................................ATATTGTCCTGTCACTGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCGGTCACAGCAGT................................................................................................. 21 1 1 2.00 2 2 0 0 0
..................................................ATATTGGCCTGTCACAGCAGTA................................................................................................ 22 1 1 2.00 2 1 1 0 0
..................................................ATATTGTCCCATCACAGCAGT................................................................................................. 21 2 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTCTCACAGCAGTT................................................................................................ 22 2 1 2.00 2 1 0 1 0
...................................................TATTGCCCTGTCACAGCAGTA................................................................................................ 21 1 1 2.00 2 0 1 0 1
..................................................ATATTGTCCTGTAACAGCAG.................................................................................................. 20 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCAGTCACAGCA................................................................................................... 19 1 1 2.00 2 2 0 0 0
..................................................ATATTGTCCTGTTACAGCAGTT................................................................................................ 22 2 1 2.00 2 2 0 0 0
...................................................TATTGTACTGTCACAGCAGT................................................................................................. 20 1 1 2.00 2 2 0 0 0

Anti-sense strand reads

AAACTTTTCCTATATACGTATATATGGTACTTTAGCCTGCGAACGGTAACTATAACAGGACAGTGTCGTCATAACATTGTGATATAATATCAAATGACGACCCAGCCCCGTAATTGTAACAACTCGCAGTAATCGTTGCTCGCCGCCTGTCCTTTTGGACTCTTTTTG

************************************.((((((((.((.((.((.(((((((((.((((((((((((((.......)))))))..))))))))).))))))).)).)).)).))))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 M054

female body

 V114

embryo

 V115

head
.............................................................AGAGTCGTCATAAGAGTGT........................................................................................ 19 3 20 0.35 7 5 1 0 1
................................TCGCCTGGGAACGGTAGCTA.................................................................................................................... 20 3 8 0.13 1 1 0 0 0
...............................................................................................................................................CGCTTGTCCTTTTGCTCTCTT.... 21 3 16 0.06 1 0 0 1 0
..............................................................GAGTCGTCATAAGATTGTT....................................................................................... 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_13:202487-202654 - dse_8 confident TTTGAAA--------AGGATATATG-----------------------------CATATATA--------CCA-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGACAG-GAAA--ACC---------------------------------------------------------------------------------TG--------------------AGAAAAAC
droSim2 3r:20926948-20927115 - dsi-mir-1000 Known_mirbase TCTGAAA--------AGGATATATA-----------------------------CATATATA--------CCG-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGACAG-GAAA--ACC---------------------------------------------------------------------------------TG--------------------AGAAAAAC
dm3 chr3R:21414549-21414716 - dme-mir-1000 Known_mirbase TCTAAAA--------AGGATATATA-----------------------------CATATATA--------CCA-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGACAG-GAAA--ACC---------------------------------------------------------------------------------TG--------------------AGAAAAAC
droEre2 scaffold_4820:6627792-6627961 + der_7 confident TCTGAAA--------AGGATATATA---C-------------------------CATGTATA--------CCA-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGTCAG-GAAAA-AAG---------------------------------------------------------------------------------CG--------------------AGAAAAAC
droYak3 3R:25064530-25064686 + dya_5 confident TCTAAAA--------AGGATATT-------------------------------------------------------------------CGAATTGG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------AGGCGGCCAG-GAAAAAAGG---------------------------------------------------------------------------------CG--------------------AGAAAAAC
droEug1 scf7180000409798:1136831-1137000 + TCGGAAA--------AGGATATATA-----------------------------TATATATG--------CCA-----------------CAAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAATACTATATCTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------TGGCGGCAAG-GAAA--ACC---------------------------------------------------------------------------------CG--------------------AGGAAAAC
droBia1 scf7180000302136:2260799-2260973 - TCCAAGA----------GATAGATCCCAGA-------------------------ATACAT---------CCA-----------------TCGAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAC--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGA-GGCG-GCGGCGGCAAG-GAAA--ACC---------------------------------------------------------------------------------CG--------------------AGGAAAAC
droTak1 scf7180000415257:294593-294769 - TCGAAAAA------GAGGATATATA-CGC-------------------------CATGTACA----------------------------CAAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGA-GGCG-GCGGCGGCAAG-GAAA--ACC------------------------------------------------------------------------C--------CG--------------------AGGAAAAC
droEle1 scf7180000491280:3122802-3122968 - TATAT-----------------T---------------------TATATATATATATATATATGTATACACTA-----------------CGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG-------------------GAAA--ACC---------------------------------------------------------------------------------CG--------------------AGGAAAAC
droRho1 scf7180000779501:511367-511526 + TCGAAAA--------AGGATATAT-------------------------------------G--------TCA-----------------CGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------AGGCGGCCAG-GAAA--AGC---------------------------------------------------------------------------------CG--------------------ACGAAAAC
droFic1 scf7180000454055:1331145-1331309 - ACCAAAT--------CGGATATAT-------------------------------------T--------CCA-----------------TGGAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGAAA-ACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGACA-GGCG-GCGGCGGCAAG-GAAA--AGC---------------------------------------------------------------------------------CG--------------------AGGAAAAC
droKik1 scf7180000302639:1623470-1623640 + CCAGGCAAATCCATAAGGATATATC---------------------------------------------GC------------------GCAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CAGCGG------AAA--ACT------------------------------------------------------------------------CCGAAACTCAA--------------------AGGAAAAC
droAna3 scaffold_13340:3670399-3670552 - dan_4 confident ACTATAA--------AGGATATATGGTGT-------------------------CATATA---------------------------------------------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------G-------AG-GAAA--AGT---------------------------------------------------------------------------------CA--------------------AGGAAAAC
droBip1 scf7180000396712:682194-682341 + TA----A--------AGGATATACC-----------------------------------------------G-----------------TCATATA--------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------G-------AG-GAAA--AGT---------------------------------------------------------------------------------CA--------------------AGGAAAAA
dp5 2:21158095-21158319 - dps-mir-1000 Known_mirbase TATAGAA----------GATACAT----------AT-------------------ATAT--------------CGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAGGGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAAA--------GAG--------AA-G--G------AG----------------------AAGCTACAAAGCTACAAAGCTACGGAAAAATGCTACAGAAAACCC-------CTA--------------------AGCGAGAC
droPer2 scaffold_3:3932601-3932808 - dpe_6 confident TATAGAA----------GATACAT----------AT-------------------ATAT--------------CGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAGGGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAAA--------GAGCTACAA--------AGC------------------------------------------------TACGGAAAAATGCTACAGAAAACCC-------CTA--------------------AGCGAGAC
droWil2 scf2_1100000004943:14638707-14638866 + dwi_7 confident AAAAG----------------------------------------------------------------------------------------------------------AGAGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATAGTAACA-TAT-T--CATTTCGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCTGTGGCAACGAG--------CGG---------AAA--ACT----CTACTTCTGATGATGATAATAATGATTC----------------------------------A----------AGTCAA--------------------AAGGGAAC
droVir3 scaffold_12855:6810207-6810415 - dvi-mir-1000 Known_mirbase TTTGATA----------TATACA-GGCGGCATATAT-------------------GTGT--------------CTGATTGTGATATATCGTCG-ATCG------------TTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTA-CGTTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAA--------A-------------A--A-GCCAGAA----------------------AAG-----------------------------------------CCACAAATCAGAGATGACAAATTCGGTTTCGGGAAGGGG
droMoj3 scaffold_6540:25791492-25791684 + dmo_3 confident CCAAGGA--------AGGC-CCAT----------CTGATTGGATTGGATATC--CATCTAT-------------------------------CAATCAACGCGTCTATTATAGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAG--------AAG--------AA-A--TCT----------------------------AATC----------------------------------GAGTCGA-------CTA--------------------TGCGGCAT
droGri2 scaffold_14906:2964677-2964848 - dgr_8 confident TTTGGAT--------A-----CT---------------------TGGATATATATATATATA----------------------------TTTAATCG------------TTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTTAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTTGCTAGCAACTAAAAAGCGAGCAGCGAGCAGCGAGA--AGC---------------------------------------------------------------------------------AG--------------------AGAA----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TTTGAAA--------AGGATATATG-----------------------------CATATATA--------CCA-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGACAG-GAAA--ACC---------------------------------------------------------------------------------TG--------------------AGAAAAACSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21145317.00453178114696604533765
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22110064.001006442013659063602
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2015979.005979351204755349
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1913172.003172230193130
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2211908.0019083377191779
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................231480.00480311597337
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211401.004014121384
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201389.00389732934253
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................211209.0020940850111
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................221179.001790615914
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................21183.008305870
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................23164.0064240832
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19157.0057512427
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19147.0047200027
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20146.004621358
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................22136.003607524
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................18136.003640131
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................21128.002800028
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................21128.0028120214
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................24127.002703024
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20122.002210021
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22116.001600124
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................21115.001500132
.............................................................................................................................ATATTGTCCTGTCACAGT......................................................................................................................................................................................................................18110.001000010
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................2019.0092106
..............................................................................................................................TATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2218.0082006
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................2318.0082015
............................................................................................................................................................................CTGCTGGGTCGGGGCATTA......................................................................................................................................................................1918.0081061
..............................................................................................................................TATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1817.0072014
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................2317.0071015
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................2116.0063012
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2216.0064020
...................................................................................................................................................TTGTAACACTATAT--TATAGTTTA.........................................................................................................................................................................................2315.0050041
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................1924.5090009
............................................................................................................................................................................CTGCTGGGTCGGGGCATTT......................................................................................................................................................................1914.0040004
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................1914.0041012
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................2314.0043001
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................1814.0042002
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGG.................................................................................................................................................................................................................2314.0041003
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1814.0041003
............................................................................................................................................................................CTGCTGGGTCGGGGCATT.......................................................................................................................................................................1814.0040022
.............................................................................................................................ATATTGTCCTGTCACAGCG.....................................................................................................................................................................................................................1914.0040004
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCG.................................................................................................................................................................................................................2313.0030102
.............................................................................................................................ATATTGTCCTGTCACAGCAGAT..................................................................................................................................................................................................................2213.0030003
................................................................................................................................TTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2013.0031002
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAGA................................................................................................................................................................................................................2413.0031011
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................2313.0030003
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................2013.0031002
.............................................................................................................................ATATTGTCCTGTCACAGCATC...................................................................................................................................................................................................................2112.0020002
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACAA..................................................................................................................................................................2312.0020011
...............................................................................................................................ATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2012.0020002
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................2212.0020002
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACT...................................................................................................................................................................2212.0020011
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTAA................................................................................................................................................................................................................2412.0020002
.............................................................................................................................ATATTGTCCTGTCACAGCGTA...................................................................................................................................................................................................................2112.0020020
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................................................................................2312.0020002
..............................................................................................................................TATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................2012.0021001
.................................................................................................................................TGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................1812.0020011
.............................................................................................................................ATATTGTCCTGTCACAGCTA....................................................................................................................................................................................................................2022.0040022
droSim2
TCTGAAA--------AGGATATATA-----------------------------CATATATA--------CCG-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGACAG-GAAA--ACC---------------------------------------------------------------------------------TG--------------------AGAAAAACSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................20120599.0020599177873353033750203001161902001000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22113350.0013350288059151870533017435886304451903002
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................2119946.009946439010622486302345977475754142110100
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1913715.00371549562483311500361000000
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................1812697.00269747196046216300010100000
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................211489.00489458101910000100000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................211447.00447388163520001000500000
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................201359.003593522500000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231308.0030813200528500100200000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................221187.0018717074108003008201100
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................231168.00168190050000464215401000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................211101.0010113161007000101800000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................22191.00916922200000101500000
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20142.0042001103700000300000
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................21130.0030302601000410400000
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................18129.0029700002200000000000
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19128.0028171041500000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22128.0028190300000000600000
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................20123.002330160500340100000
............................................................................................................................................................................CTGCTGGGTCGGGGCATT.......................................................................................................................................................................18122.0022122400400000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................22120.002091000000100900000
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................21117.0017131000000010200000
..............................................................................................................................TATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................18115.0015000011400000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................24114.001420100000640100000
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19113.0013000001100100100000
.............................................................................................................................ATATTGTCCTGTCACAGCG.....................................................................................................................................................................................................................19113.0013130000000000000000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGC.................................................................................................................................................18111.001180300000000000000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCAAC..............................................................................................................................................21111.001180300000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTATT................................................................................................................................................................................................................24110.0010000001000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................1929.5019190000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................2019.00980100000000000000
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2217.00700000600000100000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAA.....................................................................................................................................................................2016.00601500000000000000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTA......................................................................................................................................................................1916.00610100400000000000
.............................................................................................................................ATATTGTCCTGTCACAGCC.....................................................................................................................................................................................................................1915.00550000000000000000
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................1915.00500000100010300000
...................................................................................................................................................TTGTTACACTATAT--TATAGTTTA.........................................................................................................................................................................................2314.00400100000000300000
............................................................................................................................................................................CTGCTGGGTCGGGGCATA.......................................................................................................................................................................1814.00440000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCTT....................................................................................................................................................................................................................2024.00880000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................2314.00420010000000100000
...............................................................................................................................ATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2113.00300000300000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................2313.00300000000000300000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACG.............................................................................................................................................2213.00330000000000000000
...............................................................................................................................................................................CTGGGTCGGGGCATTAACA...................................................................................................................................................................1913.00320100000000000000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCA................................................................................................................................................1913.00330000000000000000
.............................................................................................................................ATATTGTCCTGTCACA........................................................................................................................................................................................................................1613.00300000000120000000
.............................................................................................................................ATATTGTCCTGTCACAGG......................................................................................................................................................................................................................1813.00330000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................2212.00200000000000200000
...............................................................................................................................................................................CTGGGTCGGGGCATTAAC....................................................................................................................................................................1812.00201100000000000000
................................................................................................................................TTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2012.00200000200000000000
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................2112.00200000000200000000
................................................................................................................................TTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2012.00220000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAAG...................................................................................................................................................................................................................2112.00220000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGG.................................................................................................................................................................................................................2312.00220000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGT......................................................................................................................................................................................................................1812.00220000000000000000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACG...................................................................................................................................................................2212.00200200000000000000
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1811.00100000100000000000
...............................................................................................................................ATTGTCCTGTCACAGCAGTATTG...............................................................................................................................................................................................................2311.00100000100000000000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACA.............................................................................................................................................2211.00100100000000000000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCG................................................................................................................................................1911.00110000000000000000
..........................................................................................................................................................................TACTGCTGGGTCGGGGCATT.......................................................................................................................................................................2011.00110000000000000000
..............................................................................................................................TATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................1911.00110000000000000000
....................................................................................................................................................................................................................AACGAG--------CGGCGGACAG-GAAA--ACC---------------------------------------------------------------------------------TG--------------------A.......2611.00100000000000100000
dm3
TCTAAAA--------AGGATATATA-----------------------------CATATATA--------CCA-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGACAG-GAAA--ACC---------------------------------------------------------------------------------TG--------------------AGAAAAACSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................211490974.0049097400009330001543650635062100024003183310326653896236283100321112221080684500000432023000000000000000000001143908210031719164518482801126331096469611926701191173127228610342841178039971123465795957429168231854547519150000000000178493074382372503000004050781062413496076431053936567332297591111514203128131866805604311524730132617000240158000000240003002152633833627372817171428102014200027872387310687932311561434173815111950281052638906534212851826249692977130200697322206133741243683052180350455509858518274125165664432011452932135922911604132960134113211824082151674101639413411875077431756811833139812592751724110
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................221128301.001283010000301021728750601211016900100000576280144132854247645500100011017114322100003716220000000000000000000004531221528950456442771922639925810511817941367234122011801553675249685240317021491092313534626143775091254982739147300000000001910624211311041000000000000006791837605031142063827194929159535693109226736414315115701020114128610400040700000000000000000021187032495039242861465628984500142512350226679231068531007163170011438822032460161416101339172121310112861129589720842822525218101074701267127937961617528906100131002818687638833823225830
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................20179086.0079086000016100010500120017400001010218381588138211112000000000000001000000543000000000000000000000503023004133638013165111900247071003145194737017914214120117883133862075380283314410000000000102000000000000000000000004244564702012127110219825719222766157212602208003004695303000020100000000000000000000143821121200214001810013412133101235712600302400013091000445010500010000000000020332203936457780761631827137120234101671620023526512001010004143027514303525113210
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................19114360.00143600000000000000002010000000010212161871591100000000000000000000001230000000000000000000001000000200040120120000160000700010000121701473190084331144138520000000000000000000000000000000000002837740211535018218201164312349357000002151010000000000000000000000000010000000010000100073023721230047319703530000018020000100021000000002000000102651509995173602157030000380182900000300000000002308883425021000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................23112209.001220900001000001040000010000030000000000000000000000000000000000000000000000000000000081066001842830524483171071728110026713182222441502881439035191094546525600000000000030000000100000000000000010281620082731254941226679998522103000000864308000000700000001000000000110033232246000284002521011301001743106600000440000010000100100900110000001121277136242631411900010034028370000017000000000014650100000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2219984.00998400001000000000100400000000000000000000000000000000000000000000000000000000000000800200011200800600000023000115120100004155422240353914354503949000000000010100000004000000000200000347628026020140259111955754151238120000057900300000000000000000000000001011220000110002100810291578000961920831000066200027010010000020000001000354954759611081153480101008807281000017720000000001394120102712000110
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................2116173.00617300000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000001000010300004010000000831706360263143200000000000000000000000000000000000012910808700848016050579981180000013500000000000000000000000000000000000000000000000670349100015170110000017100021000000000000000000000366714079922131814517061001125112894000002000000000012200001000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTATC................................................................................................................................................................................................................2413787.003787000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000024121373000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................2112745.002745000000000001000001000000000000000000000000000000000000000000000000000000000000002000000000031040000003000130000000001361604090172810000000000000200000100000000000000000138162091002122016190243015000002020000000000000000000000000000000000000000000010011102272000162206000001000000200000000013000000000011842642152092544619031200177087820000060000000000210063223000000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................2212492.0024920000100368030000001000000000110000000000000000000000000000000000000000000000000001098270770115229522050300142917400014217221285556350138160501103086000000000001426000000000000000000000089920322024295151232054150000083000000000000000000000000000000010000014200000006158001000041203000001100004000000000000000000000007577406521022393010000001611000002001000000028344702000100
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................2112423.0024230000300000020000000000000000000000000000000000000000000000000000000000000000000040000001000800400000022000100000000014110110729150540000000000000000000000000000000000006111204032133822111381332113100008800100000000000000000000000000000000000000207300210737200015730500000100000000000000000100000000001160248254165296201000061043530000060000000000227031331000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2312176.00217600002000000000000000000000004212617401000000000000000000000017811000000000000000000000000000070004031003000353000016170300010404010237011010110000000000000000000000000000000000001622520931048203313741363205200000221000000000000000000000000000000000100000000037140043037000011140400000000000000000000000000000000007810170321000000003400000000000000000611000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGATC.................................................................................................................................................................................................................2311658.00165800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159499000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................2211146.00114600000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000021000001100002010000101217252080451615916575000000000000000000000000000000000000936204773612191301133000000330000000000000000000000000000000000000000000300041022110001512050000030000010000000000100030000000282331661125201000010084000002000000000024250021000000
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201851.0085100002000000100100300000000001249470000000000000000000000000000000000000000000000003000000400040580000101010001231120100039130901531301831927000000000000000000000000000000000000458203000860463282224000002500000000000000000000000000000000010000000000000020020000240100000300000000000001000000000100002514102601010000006019000000000000000025641110000000
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................211754.00754000010000001002000000000000137244236000000000000000000000000000000000000000000000000000100014203302310100110000020360600000154010216661102101300000000000000000000000000000000000021640302015164624468152211600000270000000000000000000000000000000000000000000200014001000011010000000000020000000000000000000000241201000000001000000001000000000001510000000000
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................191731.00731000000000000000000000000000006679211000000000000000000000000000000000000000000000000000000002000400000170000100000000000010000010110000000000000000000020000000000000009380361031076760242281000002600000000000000000000000000000000000000000000000750010000020000000100000000000000100000000000002018304506630000007041000000000000000002431001000000
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................181667.00667000000000000000101000000000165118859000000000000000000000000000000000000000000000010000000001001100000000000401000004065030021031501001100000000000000000000000000000000371056268128692963828000002400000000000000000000000000000000000000000000000200210000014000000000000010001000000000000000000212746731201000000000000000000000000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................241599.0059900002000000300000000000000000000000000000000000000000000000000000000000000000000000000000000026010000130001800010000010101080170104200000000000000000000000000000000000064830360017360310500991100000380000000100000000000000000000000100000010000100010002000050020000020000000000000000100000000000310990011000000100200000000000000000000000000000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................211455.004550000200011021000000000000002500000000000000000000000000001000000000000000000000012231400100020610000151900018650271022000002021201023000000000011190000000000000000000000059043244035321500000170000000000000000000000000000000100000010000000018140010000000000000400001000000000000000000000002514953740200000000040000000000000000102031020000000
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................201454.004540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000001124710000000000000000000000000000000000000405901600320401318000000100000000000000000000000000000000000000000000000000033000041910000001000000000000000000000000000020211010500100000002021000000000000000002201100000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................221432.00432000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010100000000100100001001013600034170403300000000000000000000000000000000000036570313371527355254840000035000000000000000000000000000000000000000000000003000100004703000001000000001000000000000000000027680000000000000100000000000000000600000000000
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................201368.003680000000000001000000000000009300000000000000000000000000000100000000000000000000010003000000000000000000000500010000000000012010020000000000000000000000000000000000001527027119563265142632900000010000000000000000000000000000000000000000000000004100100001201000001000000000000000000000000000013140200000000000000000000000000000100000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................201335.0033500000000010000000000000000000000000000000000000000000000000000000000000000000000200000000004000000000100002000000000141000200040560000000000000000000000000000000000001963016011717022026000000210000000000000000000000000000000010000000000040000013000041802000000000000000000000000000000000011683500000000001000000000000000000011400000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................231319.003190000100000000000010000000000000000000000000000000000000000000000000000000000000010000000001000100000010000000000000011000115010040000000000000000000000000000000000002947015011333144020123100000350000000000000000000000000000000000000000000000001011000013020000010000000000000000000000000000410120100000000000300000000000000000301100000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................231298.002980000100000000000000000000000000000000000000000000000000000000000000000000000000010001000000000001001000000530010000035201001218175000000000000000000000000000000000000195601410212114051120000001000000000000000000000000000000000000110000003114000000300003201000000000000000000000010000000000021080020000000100000000000000000000300000000000
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................191224.00224000000000000001001000000000000151501000000000000000000000000000000000000000000000000001000000102400000000000301000004023200013207161000000000000000000000000000000000000014360110002212004000000002000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000011230000000000000000000000000000000000000000000
...................................................................................................................................................TTGTAACACTATAT--TATAGTTTA.........................................................................................................................................................................................231186.00186000000000000000000000000000115011310000000000000000000000000000000000000000000000000002000000000200000090000000000100021010045010110000000000000000000000000000000000002518080101701161188000000000000000000000000000000000000000000000000000004000000001000000000000000000000000000000000000000015700010000000000000100000000000100000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................231180.001800000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000100000000000000043200001301801125000000000000000000000000000000000000111801100220000000000002000000000000000000000000000000000000000000000000000400001201000000000000000000000000000000000036160000000000000000000000000000000300000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................231170.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000001000000000000003000010005014000000000000000000000000000000000000153801400470401502110000013000000000000000000000000000000000000000000000000000010001000000001000000000000000000000000000011850000000000000000000000000000000100000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................201152.00152000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000008000010001211011000000000000000000000000000000000000212107000400030200000070000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000343190000000000101000000000000000000900000000000
.............................................................................................................................ATATTGTCCTGTCACAGCC.....................................................................................................................................................................................................................191143.001430000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000318120400000504800000000000000000000000000000000000086031000000302000000000000000000000000000000000000000000000000000000000027000001601000000000000000000000000000000000013191000000000001100000000000000000300000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGGT..................................................................................................................................................................................................................221128.001280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000006503000400028037000000500000000000000000000000000000000000000000000000000000000110100000000000000000000000000000000001013840000000000000000000000000000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCATG...................................................................................................................................................................................................................211124.001240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000020520000000000000000000000000000000000001490200100000010000000000000000000000000000000000000000000000000000000000110001001000001000000000000000000000000000081682101073000000501300000000000000000000000000000
droEre2
TCTGAAA--------AGGATATATA---C-------------------------CATGTATA--------CCA-----------------TGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CGGCGGTCAG-GAAAA-AAG---------------------------------------------------------------------------------CG--------------------AGAAAAACSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21170255.0070255182722676048113111250477320
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22117908.001790813696249559272337666320
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2017295.007295536445991339957040
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1915197.00519728421933049130
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2311938.001938951486279116250
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2211772.0017724451281512014600
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................211551.0055114152269980
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201263.002631247121111080
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................211220.002209418491940
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231216.00216751312331100
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211180.001801016281530
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................221124.00124142223163460
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................241107.0010740414940
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................221106.0010633115913350
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19190.00901036114560
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................21182.00822491333300
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22167.0067824100430
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................18164.006421100600
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................23150.005060101420
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................23146.004662530300
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19144.004439000050
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20144.0044514000250
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................20143.004300700360
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGA.................................................................................................................................................................................................................23137.003730002320
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................21133.003311615190
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................................................................................23130.003020301240
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................23119.001900201160
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20119.001900200170
...................................................................................................................................................TTGTAACACTATAT--TATAGCTTA.........................................................................................................................................................................................23118.001800070110
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCG.................................................................................................................................................................................................................23115.001500103110
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................23115.00153020370
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTAA................................................................................................................................................................................................................24113.001300001120
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................21112.001210100100
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACA.............................................................................................................................................22111.00110020270
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................18111.00116000140
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................22110.00109000010
..............................................................................................................................TATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1819.0094000050
.............................................................................................................................ATATTGTCCTGTCACAGCG.....................................................................................................................................................................................................................1919.0090000090
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................2019.0090110070
.............................................................................................................................ATATTGTCCTGTCACAGT......................................................................................................................................................................................................................1818.0080000080
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGC.................................................................................................................................................................................................................2317.0071010050
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACG.............................................................................................................................................2217.0070000070
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTC.................................................................................................................................................................................................................2316.0060020040
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGG.................................................................................................................................................................................................................2316.0060000060
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1816.0062020020
..............................................................................................................................TATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2216.0063000120
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................1915.0050201020
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTGA................................................................................................................................................................................................................2415.0050000050
..........................................................................................................................................................................TACTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................2315.0050001040
...............................................................................................................................ATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2114.0040000040
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................2114.0041000030
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................2214.0040000040
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCT................................................................................................................................................1914.0040010030
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTGC................................................................................................................................................................................................................2414.0040010030
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAAA...............................................................................................................................................................................................................2514.0041000030
droYak3
TCTAAAA--------AGGATATT-------------------------------------------------------------------CGAATTGG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------AGGCGGCCAG-GAAAAAAGG---------------------------------------------------------------------------------CG--------------------AGAAAAACSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21148530.0048530144111801208912174802513911594250
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22120973.0020973977624129133804111514703492250
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2017246.0072462818474571017892068241050
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2211269.001269173181846971970000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................231693.00693554142126433230000
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................211683.00683170029203618410000
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................191677.0067760220221737330000
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................211351.003511670646610710000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................221169.00169636612305200000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................221164.0016422784352602060
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231145.001452246214232810000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................211129.0012960108131100000
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201107.0010707740121400000
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211107.001074411207700000
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................20185.0085760201600000
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................21179.00791432352500000
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................18175.0075603503400000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................23148.00480100242030000
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................20145.00452000103300000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22143.00437241181100000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................24138.00383400111910000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................23134.00343512131000000
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19133.0033230001000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................23126.0026270141200000
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19126.0026112106510000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGCAAC..............................................................................................................................................21125.0025200300200000
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20125.0025041911000000
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20121.0021012061200000
...................................................................................................................................................TTGTAACACTATAT--TATAGCTTA.........................................................................................................................................................................................23118.0018004120200000
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................22116.0016000151000000
.............................................................................................................................ATATTGTCCTGTCACAGCC.....................................................................................................................................................................................................................19115.0015100021200000
..................................................................................................................................................................................................TTGTTGAGCGTCATTAGC.................................................................................................................................................18113.0013100101100000
.............................................................................................................................ATATTGTCCTGTCACAGCAGGT..................................................................................................................................................................................................................22111.001100004700000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAA.....................................................................................................................................................................20110.001000810000010
............................................................................................................................................................................CTGCTGGGTCGGGGCATT.......................................................................................................................................................................18110.001050201200000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGA.................................................................................................................................................................................................................23110.001032011300000
.............................................................................................................................ATATTGTCCTGTCACAGCATC...................................................................................................................................................................................................................2119.00900000900000
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................1818.00805001010010
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................2318.00800007100000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTC.................................................................................................................................................................................................................2318.00810004300000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................................................................................2318.00811003300000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCC.................................................................................................................................................................................................................2317.00700001600000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTA......................................................................................................................................................................1917.00700601000000
.............................................................................................................................ATATTGTCCTGTCACAGCATG...................................................................................................................................................................................................................2117.00700003400000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACT...................................................................................................................................................................2217.00700700000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTAA................................................................................................................................................................................................................2416.00600002400000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCG.................................................................................................................................................................................................................2316.00601004100000
droEug1
TCGGAAA--------AGGATATATA-----------------------------TATATATG--------CCA-----------------CAAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAATACTATATCTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------TGGCGGCAAG-GAAA--ACC---------------------------------------------------------------------------------CG--------------------AGGAAAACSizeHit CountTotal NormTotal
No Reads
droBia1
TCCAAGA----------GATAGATCCCAGA-------------------------ATACAT---------CCA-----------------TCGAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAC--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGA-GGCG-GCGGCGGCAAG-GAAA--ACC---------------------------------------------------------------------------------CG--------------------AGGAAAACSizeHit CountTotal NormTotal
No Reads
droTak1
TCGAAAAA------GAGGATATATA-CGC-------------------------CATGTACA----------------------------CAAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGA-GGCG-GCGGCGGCAAG-GAAA--ACC------------------------------------------------------------------------C--------CG--------------------AGGAAAACSizeHit CountTotal NormTotal
No Reads
droEle1
TATAT-----------------T---------------------TATATATATATATATATATGTATACACTA-----------------CGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG-------------------GAAA--ACC---------------------------------------------------------------------------------CG--------------------AGGAAAACSizeHit CountTotal NormTotal
No Reads
droRho1
TCGAAAA--------AGGATATAT-------------------------------------G--------TCA-----------------CGAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------AGGCGGCCAG-GAAA--AGC---------------------------------------------------------------------------------CG--------------------ACGAAAACSizeHit CountTotal NormTotal
No Reads
droFic1
ACCAAAT--------CGGATATAT-------------------------------------T--------CCA-----------------TGGAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGAAA-ACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGACA-GGCG-GCGGCGGCAAG-GAAA--AGC---------------------------------------------------------------------------------CG--------------------AGGAAAACSizeHit CountTotal NormTotal
No Reads
droKik1
CCAGGCAAATCCATAAGGATATATC---------------------------------------------GC------------------GCAAATCG-------------GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------CAGCGG------AAA--ACT------------------------------------------------------------------------CCGAAACTCAA--------------------AGGAAAACSizeHit CountTotal NormTotal
No Reads
droAna3
ACTATAA--------AGGATATATGGTGT-------------------------CATATA---------------------------------------------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------G-------AG-GAAA--AGT---------------------------------------------------------------------------------CA--------------------AGGAAAACSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21155950.0055950246296523115698240834186
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22111821.0011821124519633851264666898
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2018774.00877412233681987525468
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2215797.00579714321973584620
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1912164.0021641103147541571
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2311244.0012448111132307902
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211791.0079120018838644
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................211477.004773218113910106
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231278.0027811070270134
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGA.................................................................................................................................................................................................................231234.00234120062214
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201219.002191722014229
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................231171.001713600215109
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................201146.00146800153120
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................................................................................231142.00142250044271
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................211111.0011183612019
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................211104.0010423167922
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19190.00908000505
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................24189.008986313059
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGG.................................................................................................................................................................................................................23184.00847008069
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22183.0083140116151
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................23177.007790020345
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................22148.004862452110
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................18145.004563118017
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................22145.004527023112
.............................................................................................................................ATATTGTCCTGTCACAGCAGAT..................................................................................................................................................................................................................22144.00440006137
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19144.004411104127
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTGA................................................................................................................................................................................................................24137.00373003031
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20134.003430016114
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................21133.00331224105
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTAG................................................................................................................................................................................................................24129.00294003121
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20128.00287130008
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................22123.00230007016
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCG.................................................................................................................................................................................................................23121.00211005114
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTAA................................................................................................................................................................................................................24121.00211002018
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................19220.504130122015
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................23116.0016200806
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................22115.00151201002
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................18114.0014700007
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................20114.0014020606
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................23113.0013430402
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTGG................................................................................................................................................................................................................24111.0011300008
.............................................................................................................................ATATTGTCCTGTCACAGCATG...................................................................................................................................................................................................................21110.00100001000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAGA................................................................................................................................................................................................................2419.009200106
..............................................................................................................................TATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2219.009800001
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAGT...............................................................................................................................................................................................................2518.008100214
.............................................................................................................................ATATTGTCCTGTCACAGCAGAG..................................................................................................................................................................................................................2218.008100403
.............................................................................................................................ATATTGTCCTGTCACAGCAGGT..................................................................................................................................................................................................................2217.007000502
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGAA................................................................................................................................................................................................................2417.007200005
...............................................................................................................................ATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2017.007100204
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAG................................................................................................................................................................................................................2417.007201112
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGC.................................................................................................................................................................................................................2316.006000105
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTC.................................................................................................................................................................................................................2316.006000402
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1816.006310101
...................................................................................................................................................TTGTAATTCTATACTATATAGCTTA.........................................................................................................................................................................................2516.006012003
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................2116.006000303
.............................................................................................................................ATATTGTCCTGTCACAGCC.....................................................................................................................................................................................................................1916.006000600
droBip1
TA----A--------AGGATATACC-----------------------------------------------G-----------------TCATATA--------------GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAG--------G-------AG-GAAA--AGT---------------------------------------------------------------------------------CA--------------------AGGAAAAASizeHit CountTotal NormTotal
No Reads
dp5
TATAGAA----------GATACAT----------AT-------------------ATAT--------------CGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAGGGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAAA--------GAG--------AA-G--G------AG----------------------AAGCTACAAAGCTACAAAGCTACGGAAAAATGCTACAGAAAACCC-------CTA--------------------AGCGAGACSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21124735.00247357198221736583205510327150600102
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22124714.00247148160295153928820110938610280
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2012833.0028338104861583201029380046
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................2111600.0016000346510875373000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................221850.008500123103256028739006
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................191533.0053317017893682004
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................221343.003430165169525400146
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................231276.002760501139511162007
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231263.00263086371198110002
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201196.001960139437582001
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................211173.00173011823181120001
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................211139.001390154325920045
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................221116.0011602344620131000
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................191102.00102010001000001
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................18190.009017273000007
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................21169.006901102114221000
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19158.0058023431000000
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20154.0054092516301000
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................21145.0045043102241001
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22135.003500522620000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................23119.00190277300000
...................................................................................................................................................TTGTAAC--TTAAT--TATAGCCTA.........................................................................................................................................................................................21119.00190071911000
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................22115.00150820040001
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................19113.00130533200000
...........................................................................................................................................................................ACTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................22113.00130050230003
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................21111.00110801011000
.............................................................................................................................ATATTGTCCTGTCACAGCTT....................................................................................................................................................................................................................20210.00200509051000
...............................................................................................................................ATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................1918.0080008000000
..............................................................................................................................TATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1818.0080701000000
.............................................................................................................................ATATTGTCCTGTCACAGCG.....................................................................................................................................................................................................................1918.0080004040000
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................2218.0080000710000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................2318.0080501010001
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................1927.50150505050000
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................2017.0070101040001
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................2017.0070004030000
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................1817.0070313000000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTA......................................................................................................................................................................1917.0070000340000
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1817.0070401101000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................2416.0060200031000
...............................................................................................................................ATTGTCCTGTCACAGCAGTATT................................................................................................................................................................................................................2216.0060023010000
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................2015.0050005000000
............................................................................................................................................................................CTGCTGGGTCGGGGCATTT......................................................................................................................................................................1915.0050100031000
.............................................................................................................................ATATTGTCCTGTCACAGCAGGT..................................................................................................................................................................................................................2215.0050001400000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTATT................................................................................................................................................................................................................2415.0050112100000
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................2115.0050004010000
.............................................................................................................................ATATTGTCCTGTCACAGCATC...................................................................................................................................................................................................................2115.0050012020000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................................................................................2314.0040101010001
.............................................................................................................................ATATTGTCCTGTCACAGCAAC...................................................................................................................................................................................................................2114.0040004000000
............................................................................................................................GATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................2214.0040400000000
.............................................................................................................................ATATTGTCCTGTCACA........................................................................................................................................................................................................................1614.0040000000004
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAA.....................................................................................................................................................................2013.0030010100001
droPer2
TATAGAA----------GATACAT----------AT-------------------ATAT--------------CGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAGGGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAAA--------GAGCTACAA--------AGC------------------------------------------------TACGGAAAAATGCTACAGAAAACCC-------CTA--------------------AGCGAGACSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21154875.0054875745134201250240531835
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................2214888.00488826529811691050206937
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2014244.00424478188121162279212
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2211699.0016990266304134320
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................191914.0091401643475452
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................231452.00452019141472684
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................211418.00418500643472
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................211227.002271201281860
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211157.00157010391161
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231120.00120026225670
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................22193.009301415730
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................20161.006103406210
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...................................................................................................................................................................22155.0055120152611
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................20132.00320005270
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................21128.00280211240
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................20121.00211008120
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19119.00190170020
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................18119.00191402120
.............................................................................................................................ATATTGTCCTGTCACAGCATG...................................................................................................................................................................................................................21117.00170002150
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................23116.00160302110
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19113.0013000580
.............................................................................................................................ATATTGTCCTGTCACAGCATC...................................................................................................................................................................................................................21113.00130003100
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22113.0013011380
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20112.0012010290
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................19212.00240002220
............................................................................................................................................................................CTGCTGGGTCGGGGCATT.......................................................................................................................................................................18110.0010410050
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................22110.0010000280
............................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................2119.009503100
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................2419.009000270
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................2319.009000270
.............................................................................................................................ATATTGTCCTGTCACAGCAGGT..................................................................................................................................................................................................................2218.008000170
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2118.008030230
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................2017.007041020
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................2317.007010240
............................................................................................................................................................................CTGCTGGGTCGGGGCATTT......................................................................................................................................................................1917.007000160
...........................................................................................................................................................................ACTGCTGGGTCGGGGCATTAAC....................................................................................................................................................................2216.006101220
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2216.006050010
.............................................................................................................................ATATTGTCCTGTCACAGCTT....................................................................................................................................................................................................................2036.00180005130
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1816.006010230
.............................................................................................................................ATATTGTCCTGTCACAGCAGCC..................................................................................................................................................................................................................2216.006000060
droWil2
AAAAG----------------------------------------------------------------------------------------------------------AGAGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATAGTAACA-TAT-T--CATTTCGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCTGTGGCAACGAG--------CGG---------AAA--ACT----CTACTTCTGATGATGATAATAATGATTC----------------------------------A----------AGTCAA--------------------AAGGGAACSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21193112.00931124343114816611791868042
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22154414.00544143931886433599213562
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................20118088.00180889449567413607671
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1914262.004262247514383922
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2311526.00152622293700772
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2211162.00116235157361069
...................................................................................................................................................TAGTAACA-TAT-T--CATTTCGTA.........................................................................................................................................................................................211626.006261411041272
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................211486.004863101335137
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................................................................................221414.00414778129830
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................211399.0039936002631
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231318.003183559163160
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211272.002723025262
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................181225.0022520300616
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201178.001785763589
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................211175.0017536614362
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................201152.001521440008
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19194.00940731074
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19168.006810460012
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20165.00650303428
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------...................................................................................................................................24158.0058520015
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................21152.00521040335
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................22137.00372101816
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22135.00351000178
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20130.0030410025
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------C..................................................................................................................................25129.0029221042
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................23125.0025430414
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------A..................................................................................................................................25122.0022220000
...........................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................22121.0021141042
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA............................................................................................................................................23120.0020200000
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................19116.001670009
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................18115.001524009
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................22115.001514055
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................20113.0013100111
............................................................................................................................................................................CTGCTGAGCCGGGGCATT.......................................................................................................................................................................18113.0013130000
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------CGG---------.......................................................................................................................27113.001350080
.............................................................................................................................ATATTGTCCTGTCACAGCG.....................................................................................................................................................................................................................19112.001280004
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................19110.001011026
.AAAG----------------------------------------------------------------------------------------------------------AGAGCTTGCCAGTG........................................................................................................................................................................................................................................1819.00900036
........................................................................................................................................................................CGTACTGCTGAGCCGGGGCATT.......................................................................................................................................................................2219.00980010
.............................................................................................................................ATATTGTCCTGTCACAGCC.....................................................................................................................................................................................................................1919.00930006
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................2318.00830005
......................................................................................................................................................TAACA-TAT-T--CATTTCGTA.........................................................................................................................................................................................1818.00850030
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................2117.00700061
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAA.....................................................................................................................................................................2017.00700070
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAAC..............................................................................................................................................2117.00770000
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2117.00700007
...............................................................................................................................ATTGTCCTGTCACAGCAGTATA................................................................................................................................................................................................................2216.00600033
...............................................................................................................................ATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2116.00601014
.............................................................................................................................ATATTGTCCTGTCACAGT......................................................................................................................................................................................................................1816.00600024
..............................................................................................................................TATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1816.00605001
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------AA.................................................................................................................................2615.00550000
..............................................................................................................................TATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2215.00503002
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------CGG---------A......................................................................................................................2815.00550000
....................................................................................................................................................AGTAACA-TAT-T--CATTTCGTA.........................................................................................................................................................................................2015.00501040
............................................................................................................................................................................CTGCTGAGCCGGGGCATTA......................................................................................................................................................................1915.00530011
.............................................................................................................................ATATTGTCCTGTCACAGCAGTGA.................................................................................................................................................................................................................2315.00511003
....................................................................................................................................................................ATTTCGTACTGCTGAGCCGGGGCATT.......................................................................................................................................................................2615.00550000
...............................................................................................................................ATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2114.00401021
........................................................................................................................................................................CGTACTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................2514.00440000
......................................................................................................................................................TAACA-TAT-T--CATTTCGTACTGCTGAGCC...............................................................................................................................................................................2814.00440000
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1814.00411002
.............................................................................................................................................................................TGCTGAGCCGGGGCATTAACA...................................................................................................................................................................2114.00412010
..........................................................................................................................................................................TACTGCTGAGCCGGGGCATT.......................................................................................................................................................................2014.00440000
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------AAA---------.......................................................................................................................2713.00330000
.........................................................................................................................................................................GTACTGCTGAGCCGGGGCATTA......................................................................................................................................................................2213.00320010
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------CAA---------.......................................................................................................................2713.00330000
...................................................................................................................................................TAGTAACA-TAT-T--CATTTCGT..........................................................................................................................................................................................2013.00330000
..................................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGAG--------G..................................................................................................................................2513.00330000
droVir3
TTTGATA----------TATACA-GGCGGCATATAT-------------------GTGT--------------CTGATTGTGATATATCGTCG-ATCG------------TTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTA-CGTTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAA--------A-------------A--A-GCCAGAA----------------------AAG-----------------------------------------CCACAAATCAGAGATGACAAATTCGGTTTCGGGAAGGGGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21141284.00412848876711161205030011200045712689115427843496132972646327950234232111811210192131100001017413710124620142885134301394002031274176001202
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................22115885.00158858544254629120200000000189396458413498994371860148603203137514000008001400060685680161811691351465749652112858012003130323510000
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2018105.008105305269595039000000000021919461108185671113350010001313011000000000000023052320171372547630001004138233000100
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2311810.00181002371001000000004271819628412888012525400110310300201200000000000000000001012144303000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2211688.0016884979600000000001621157714117067011820711000300000000000000000000000000000284843300000001000000000
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1911001.00100141114510000000000503718204121043360000010000000000000000000000000000012563300000004000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231749.0074902461900000000001467735934842076132000002020000000000000000000000000003422000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................211498.00498783220400000000003522410220000000000000000000000000000000000005168800000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................211170.0017013103260000000000040031002000000000000000000000000000000100000332000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................181141.00141974420000000000433241038000000000000000000000000000000000122017000000002000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211141.00141011200000000000781631030000000000000000000000000000000000000092700000000000000000
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201111.00111008120000000000341310003000000000000000000000000000000000000012100000000000000000
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................................................................................22198.0098054150000000000621571043000000000000010000000000141322000009812000000000000001100
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................22188.00880101300000000001223863022000000000000000000000000000001000002725100000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................20187.0087563000000000000000000001000000000000000000000000000000000000018000000000000000000
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19179.007907710000000000001000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TTGTA-CGTTAAGC--AATTG-GTA.........................................................................................................................................................................................21171.00710002600000000001111010020000000000000000000000000412110010011160000000100000000000
..................................................................................................................................................................................................TTGTTGAGCGTCGTTAGCAACC.............................................................................................................................................22167.006705900000000000000010000100000000000000000000000000010000001200000010000000010000
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................21160.006000404000000000050210001300000000000000000000000000000000000103000000000000000000
..................................................................................................................................................................................................TTGTTGAGCGTCGTTAGCAAC..............................................................................................................................................21153.005314000000000000040001102200000000000000000000000000000000000001000000000000010000
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................19147.004700160000000000043052103300000000000000000000000000000000000008200000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................24146.0046001000000000001630111103400000000000001000000000000000000000004001000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................23139.00390020000000000055270303900000000000000000000000000000000000003000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................22135.00352652000000000030112000300000000000000000000000000000000000037000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20131.003101100000000000112203051000000000000000000000000000000000000014000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................23129.00290020000000000052364000400000000000000000000000000000000000003000000000000000000
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................20121.00210029000001000022020001100000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................21116.00160102000000000010001100000000000000000000000000001001101000312000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................20116.001601100000000000100000001000000000000000000000000000000000000010200000000000000000
.........................................................................................GTCG-ATCG------------TTGCGCTTGCCAGTG........................................................................................................................................................................................................................................23113.00130700000000000020000000000000000000000000000000000000000000111100000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................23112.00120013000000000020000101000000100000000000000000000000000000111000000000000000000
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................19112.00120050000000000010030100000000000000000000000000000000000000002000000000000000000
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................18112.001210100000000000000000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCACC...................................................................................................................................................................................................................21111.001100000000000000000000000000000000000000000000000000000000000011000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................19111.00112310000000000000000000000000000000000000000000000000000000005000000000000000000
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................22110.00100050000000000001020000100000000000000100000000000000000000000000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................22110.00100000000000000000000000200000000000000000000000000000000000008000000000000000000
...............................................................................................................................ATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2119.0090010000000000001002200200000000000000000000000000000000000001000000000000000000
...................................................................................................................................................TTGTA-CGTTAAGC--AATTG-GT..........................................................................................................................................................................................2019.0090010000000000000001000000000000000000000000000000000000000106000000000000000000
...........................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................2219.0090113000000000011000100000000000000000000000000000000000000001000000000000000000
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2118.0080060000000000000000000000000000000000000000000000000000000001100000000000000000
..............................................................................................ATCG------------TTGCGCTTGCCAGTG........................................................................................................................................................................................................................................1918.0080010000000000000010000000000011200000000000000000000000000002000000000000000000
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1818.0080030000000000012110000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTGTTGAGCGTCGTTAGCAACCA............................................................................................................................................2317.0070101000000000001001003000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1816.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCC.....................................................................................................................................................................................................................1916.0060100000000000000010001000000000000000000000000000000000000003000000000000000000
..........................................................................................................................................................................TACTGCTGAGCCGGGGCATT.......................................................................................................................................................................2016.0061000000000000010001000100000000000000000000000000000000000001100000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCATC...................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000005000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................................................................................2315.0050000000000000000100000100000000000000000000000000000000000002100000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTATT................................................................................................................................................................................................................2415.0050000000000000010111100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TACTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................2314.0040100000000000000001001000000000000000000000000000000000000100000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCG.....................................................................................................................................................................................................................1914.0041100000000000000000000000000000000000000000000000000000000011000000000000000000
............................................................................................................................................................................CTGCTGAGCCGGGGCATTT......................................................................................................................................................................1914.0040000000000000010000000000000000000000000000000000000000000003000000000000000000
............................................................................................................................................................................CTGCTGAGCCGGGGCATT.......................................................................................................................................................................1814.0040211000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TCG-ATCG------------TTGCGCTTGCCAGTG........................................................................................................................................................................................................................................2214.0040000000000000000001000000000000000000000000000000000000000003000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCAGTCA.................................................................................................................................................................................................................2314.0040000000000000000000100100000000000000000000000000000000000002000000000000000000
.................................................................................................................................TGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................1814.0040000000000000000000101100000000000000000000000000000000000010000000000000000000
..................................................................................................................................................................................................TTGTTGAGCGTCGTTAGC.................................................................................................................................................1814.0040200000000000000001000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................2113.0030000000000000010000000000000000000000000000000000000000000002000000000000000000
droMoj3
CCAAGGA--------AGGC-CCAT----------CTGATTGGATTGGATATC--CATCTAT-------------------------------CAATCAACGCGTCTATTATAGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCAG--------AAG--------AA-A--TCT----------------------------AATC----------------------------------GAGTCGA-------CTA--------------------TGCGGCATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................221159680.001596801570745713711732147406144
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................21174825.0074825264514301924326365216523490
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................2018361.00836112251930123479523103
.............................................................................................................................ATATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................2114145.004145264715139372
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2213541.0035412444812171746163123
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1911337.0013375745207311510
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................231759.00759755916024021114
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................231741.007411531056714492
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................201723.0072362007150
.............................................................................................................................ATATTGTCCTGTCACAGCAGTC..................................................................................................................................................................................................................221702.0070212139376040
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................................................................................221637.0063749913175022
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................211619.00619993335110
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................201279.002791931411682
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................211238.00238407780752
...................................................................................................................................................TTGTAAA-TTAAGC--AATTG-GTA.........................................................................................................................................................................................211206.00206015001910
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................211189.0018927141741
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................211139.0013963457771
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................191116.0011617053847
.............................................................................................................................ATATTGTCCTGTCACAGCAGTG..................................................................................................................................................................................................................221106.001065937820
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................191104.0010410300100
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAC.................................................................................................................................................................................................................23188.00884038730
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................19172.00722110680
.............................................................................................................................ATATTGTCCTGTCACAGCAT....................................................................................................................................................................................................................20145.004530212010
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................18143.0043401112160
.............................................................................................................................ATATTGTCCTGTCACAGCAGGC..................................................................................................................................................................................................................22138.00380110360
.............................................................................................................................ATATTGTCCTGTCACAGCAGCT..................................................................................................................................................................................................................22128.00280871120
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................21125.00252300200
.............................................................................................................................ATATTGTCCTGTCACAGCAC....................................................................................................................................................................................................................20124.00240019140
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTG.................................................................................................................................................................................................................23124.00244051311
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAG.................................................................................................................................................................................................................23123.0023812750
.............................................................................................................................ATATTGTCCTGTCACAGCAGTTA.................................................................................................................................................................................................................23122.0022517810
.............................................................................................................................ATATTGTCCTGTCACAGCATA...................................................................................................................................................................................................................21119.00190031150
...........................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................22119.00191100161
.................................................................................................................................TGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................18118.00180100170
.............................................................................................................................ATATTGTCCTGTCACAGCAA....................................................................................................................................................................................................................20118.00183031011
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................18118.00181201230
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................18118.00186001110
..............................................................................................................................TATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................22117.00171500020
..............................................................................................................................TATTGTCCTGTCACAGCAGC...................................................................................................................................................................................................................20117.00171000160
.............................................................................................................................ATATTGTCCTGTCACAGCT.....................................................................................................................................................................................................................19117.00170021500
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................24115.0015417210
.............................................................................................................................ATATTGTCCTGTCACAGCAGTATT................................................................................................................................................................................................................24115.0015400650
.............................................................................................................................ATATTGTCCTGTCACAGCAGGT..................................................................................................................................................................................................................22115.0015018510
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAA.....................................................................................................................................................................20113.0013032080
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAACAA..................................................................................................................................................................23112.00120100110
.............................................................................................................................ATATTGTCCTGTCACAGCTA....................................................................................................................................................................................................................20112.00120000120
droGri2
TTTGGAT--------A-----CT---------------------TGGATATATATATATATA----------------------------TTTAATCG------------TTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTTAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTTGCTAGCAACTAAAAAGCGAGCAGCGAGCAGCGAGA--AGC---------------------------------------------------------------------------------AG--------------------AGAA----SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................................................ATATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................211731.00731371360
.............................................................................................................................ATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................221240.0024022911
.............................................................................................................................ATATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................20190.0090864
..............................................................................................................................TATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................20126.0026260
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................23124.0024240
..............................................................................................................................TATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................21118.0018180
.............................................................................................................................ATATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................22116.0016151
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................23112.0012102
..............................................................................................................................TATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................19110.0010100
.............................................................................................................................ATATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1917.00770
................................................................................................................................TTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1813.00330
................................................................................................................................TTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................1913.00330
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...................................................................................................................................................................2212.00211
...............................................................................................................................ATTGTCCTGTCACAGCAGT...................................................................................................................................................................................................................1912.00220
..............................................................................................................................TATTGTCCTGTCACAGCAGTAA.................................................................................................................................................................................................................2212.00220
.............................................................................................................................ATATTGTCCTGTCACAGC......................................................................................................................................................................................................................1812.00220
............................................................................................TAATCG------------TTGCGCTTGCCAGTG........................................................................................................................................................................................................................................2111.00110
..............................................................................................................................TATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................2311.00110
..............................................................................................................................TATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2111.00110
..............................................................................................................................TATTGTCCTGTCACAGCAGTAT.................................................................................................................................................................................................................2211.00110
...............................................................................................................................ATTGTCCTGTCACAGCAGTT..................................................................................................................................................................................................................2011.00110
...........................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................2211.00110
.............................................................................................................................ATATTGTCCTGTCACAGCAGTAAA................................................................................................................................................................................................................2411.00110
.............................................................................................................................ATATTGTCCTGTCACAGCAGA...................................................................................................................................................................................................................2111.00101
.............................................................................................................................ATATTGTCCTGTCACAGCAGG...................................................................................................................................................................................................................2111.00101
..............................................................................................................................TATTGTCCTGTCACAGCA.....................................................................................................................................................................................................................1811.00110
............................................................................................................................GATATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................2311.00110
...............................................................................................................................ATTGTCCTGTCACAGCAGTA..................................................................................................................................................................................................................2011.00110
............................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC....................................................................................................................................................................2111.00110
...............................................................................................................................ATTGTCCTGTCACAGCAG....................................................................................................................................................................................................................1811.00110
.............................................................................................................................ATATTGTCCTGTCACAGCTA....................................................................................................................................................................................................................2020.50101

Generated: 10/20/2015 at 06:51 PM