dse_785

Antisense to exon [dsec_GLEANR_11231:1]; Antisense to CDS [Dsec\GM11088-cds]; CDS [Dsec\GM11089-cds]; exon [dsec_GLEANR_11233:1]; exon [dsec_GLEANR_11233:2]; CDS [Dsec\GM11089-cds]; intron [Dsec\GM11089-in]

Name	Class	Family	Strand
Baggins1	LINE	LOA	+

##################################################-------------------------------------------------------------################################################## GCCCATCTGTTTGGGATTCTCCAATCAAGTTTGGAGGAATCCACTTCATGGTGGGCCACCTGATAGTGGACTGCCGCAACGCAACCACTGCTGAGTGTCTGGAATCAGCAGTCCCCACCCTCAGTAAGTGGAGCGGTGTCTCCCTGGTGGTAAGAATGGGC ************************************************((((.((((......))))....))))..........(((((((..........)))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M054 female body	V114 embryo	V115 head
............................................................TGATAGTGGACTGCCGCAACGCAAC............................................................................	25	0	20	12.05	241	216	20	5
............................................................TGATAGTGGACTGCCGCAACGC...............................................................................	22	0	20	2.60	52	27	25	0
............................................................TGATAGTGGACTGCCGCAACG................................................................................	21	0	20	1.15	23	9	14	0
............................................................TGATAGTGGACTGCCGCAACGCA..............................................................................	23	0	20	1.15	23	0	16	7
........................................................................................................................TCAGTAAGTGGAGCGGTGTCTC...................	22	0	20	0.45	9	2	6	1
............................................................TGATAGTGGACTGCCGCAAC.................................................................................	20	0	20	0.25	5	0	5	0
.......TGTTTGGGATACTCCAATGAAGTTTGG...............................................................................................................................	27	2	4	0.25	1	1	0	0
........................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTG...............	26	0	20	0.25	5	0	5	0
............................................................TGATAGTGGACTGCCGCAACGCAACCA..........................................................................	27	0	20	0.25	5	0	4	1
...............................................................................................................................GTGGATCGGTCTCTGCCTGGT.............	21	3	5	0.20	1	1	0	0
......................................ATCCACTTCATGGTAGGA.........................................................................................................	18	2	5	0.20	1	1	0	0
............................................................TGATAGTGGACTGCCGCAACTCAAC............................................................................	25	1	20	0.15	3	3	0	0
............................................................TGATAGTGGACTGCCGCAACGCAT.............................................................................	24	1	20	0.15	3	3	0	0
...................................................TGGGCCACCTGATAGTGGACTGCCGC....................................................................................	26	0	20	0.15	3	2	0	1
........................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCT................	25	0	20	0.15	3	2	1	0
.............................TTTGTAGGAATCCACTTCATGGTC............................................................................................................	24	2	7	0.14	1	0	1	0
........................................................................................................................TCAGTAAGTGGAGCGGTGTC.....................	20	0	20	0.10	2	2	0	0
.............................................................GATAGTTGACTGCCGCAACGCA..............................................................................	22	1	20	0.10	2	2	0	0
......................................................GCCACCTGATAGTGGACTGCCGCAACGC...............................................................................	28	0	20	0.10	2	2	0	0
...........................................................CTGATAGTGGACTGCCGCAACGCAAC............................................................................	26	0	20	0.10	2	2	0	0
...........TGGGATTCTCCAATCAAGTTTGGAGG............................................................................................................................	26	0	20	0.10	2	2	0	0
...................TCCAATCAAGTTTGGAGGAATCCACT....................................................................................................................	26	0	20	0.10	2	0	2	0
............................................................TGATAGTGGACTGTCGCAACGCAAC............................................................................	25	1	20	0.05	1	0	1	0
..........TTGGGATTCTCCAATCAAGTTTGGAGG............................................................................................................................	27	0	20	0.05	1	1	0	0
........................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCC.................	24	0	20	0.05	1	1	0	0
..........................................................CCTGATAGTGGACTGCCGCAACGC...............................................................................	24	0	20	0.05	1	1	0	0
........................................................................................................................TCAGTAAGTGGAGCGGTGTCT....................	21	0	20	0.05	1	0	0	1
.............................................................GATAGTGGACTGCCGCAACG................................................................................	20	0	20	0.05	1	1	0	0
............................................................TGATATTGGACTGCCGCAACGC...............................................................................	22	1	20	0.05	1	1	0	0
........................................................................................................................TCAGTAAGTGGAGCGGTTTC.....................	20	1	20	0.05	1	0	1	0
.....................CAATCAAGTTTGGAGGAATCCACT....................................................................................................................	24	0	20	0.05	1	1	0	0
............................................................TGATAGCGGACTGCCGCAACGCA..............................................................................	23	1	20	0.05	1	1	0	0
...................TCCAATCAAGTTTGGAGGACTCCACT....................................................................................................................	26	1	20	0.05	1	0	1	0
............................................................TGATAGTGGAGTGCCGCAACG................................................................................	21	1	20	0.05	1	0	1	0
........................TCAAGTTTGGAGGAATCCACTTCA.................................................................................................................	24	0	20	0.05	1	1	0	0
........................................................................................................................TCAGTAAGTGGAGCGGTGTT.....................	20	1	20	0.05	1	0	1	0
............................................................TTATAGTGGACTGCCGCAACGCAA.............................................................................	24	1	20	0.05	1	1	0	0
............................................................TGATAGTGCACTGCCGCAACGCA..............................................................................	23	1	20	0.05	1	1	0	0
............................................................TGATAGTGGACTGCAGCAACGCAAC............................................................................	25	1	20	0.05	1	1	0	0
............................................................TGATAGTGGACTGCCGCAACA................................................................................	21	1	20	0.05	1	1	0	0
............................................................TGATAGTGGACTGCCGCAACCCAACC...........................................................................	26	1	20	0.05	1	1	0	0
............................................................CGATAGTGGACTGCCGCAACGCAACC...........................................................................	26	1	20	0.05	1	1	0	0
........................................................................................................................TCAGTAAGTGGAGCGGTGTCTCC..................	23	0	20	0.05	1	0	0	1
...........................................................ATGATAGTGGACTGCCGCAACGCAAC............................................................................	26	1	20	0.05	1	1	0	0
............................................................TGATAGTGGACTGCCGCAACGCAACCT..........................................................................	27	1	20	0.05	1	1	0	0
............................................................TGATAGTGGACGGCCGCAACG................................................................................	21	1	20	0.05	1	0	1	0
............................................................AGATAGTGGACTGCCGCAACGCA..............................................................................	23	1	20	0.05	1	1	0	0
..........TTGGGATTCTCCAATCAAGTTTGGAGGA...........................................................................................................................	28	0	20	0.05	1	1	0	0
.....................................................................ACTGCCGCAACGCAACCACTGCTG....................................................................	24	0	20	0.05	1	1	0	0
..........TTGGGATTCTCCAATCAAGTTTGGAG.............................................................................................................................	26	0	20	0.05	1	0	1	0
.......................................................................................................................CTCAGTAAGTGGAGCGGTGTCTCCCTG...............	27	0	20	0.05	1	0	1	0
............................................................TGATAGTGGACGGCCGCAACGCAAC............................................................................	25	1	20	0.05	1	1	0	0
........................................................................................................................TCAGTAAGTGGAGCGGTGTCGCCCT................	25	1	20	0.05	1	1	0	0

######----------------------------------------------------------------------------------------------------------------------------------------------------------- CGGGTAGACAAACCCTAAGAGGTTAGTTCAAACCTCCTTAGGTGAAGTACCACCCGGTGGACTATCACCTGACGGCGTTGCGTTGGTGACGACTCACAGACCTTAGTCGTCAGGGGTGGGAGTCATTCACCTCGCCACAGAGGGACCACCATTCTTACCCG ************************************************((((.((((......))))....))))..........(((((((..........)))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M054 female body
........CAAACCCTAAGAGGTTAGTTCAAACCT..............................................................................................................................	27	0	1	1.00	1	1
..........AACCCTAAGAGGTTAGTTCAAACCT..............................................................................................................................	25	0	20	0.15	3	3
.......TTATACCCTAAGAGGTTAGTTCAAACCT..............................................................................................................................	28	3	9	0.11	1	1
....................................................CCCGGTGGACTATCACCTGACGGCGT...................................................................................	26	0	20	0.05	1	1

Species	Coordinate	ID	Alignment
droSec2	scaffold_1108:8979-9139 +	dse_785	GCCCA---TCT------------GTTTGGGATTCTCCAATCAAGTTTGGAGGAATCCACTTCATGGTGGGCCACCTGATAGT-----GGACTGCCGCAACGCAACC-ACTGCTGAGTGTCTGGAATCAGCAGTCCCCACCCTCAGTAAGTGGAGCGGTGTCTCCCTGGTGGT--AAGAATGGGC
droSim2	2l:23300056-23300215 +		CCTC----TCC------------GGTTGGGATTCTCCAATCAAGTTTGGAGGAATCCACTTCAGGGTGGGCCACCTGATAGT-----GGACTGCCGCAACGCAACC-ACTGCTGAGTGGCTGCAATCAGCAGTCCCCAGCCTCAGTAAGTGGAGCGGTGTCTCCCTGGAGGT--AAGGATGGGC
dm3	chr3LHet:2033477-2033636 -		CCTC----TCT------------GGTTGGGATTCTTCAATTAAGTTTGGAGGAATCCACTTCAGGGTGGGTCACCTGATAGT-----GGATTGCCGCAACGCAACC-ACTGCTGAGTGGCTGCAATTAGCAGTCCCCACCCTCAGTAAGTGGAGCGGTGTCTCCCTGGAGGC--AAAGATGGGC
droEre2	scaffold_4845:21754860-21754881 +		GCCCG---TCA------------GGTTGAACTTGTCC---------------------------------------------------------------------------------------------------------------------------------------------------
droYak3	2R:20355962-20356000 +		GCCCG---TCA------------GGTTGAACTTGTCT-----------------------------------TCTATGAAGTCGGT-----------------------------------------------------------------------------------------------GGG
droEug1	scf7180000409464:748962-748994 +		GTCCAAAGTCT------------GGCTAAAATACTCCAGGCCAGT-------------------------------------------------------------------------------------------------------------------------------------------
droTak1	scf7180000411443:1068-1115 -		CCTCA--------------------------------------------------------------------------------------------------------------------------------------GTTGCGGACGTGGAAGGGAGTACCCCTAGAAAC--CCGCACGAGA
droEle1	scf7180000489733:54262-54424 +		GCTCACG-TCA------------GCGTGGAGCGGTCCCGTCGTGTTCAGGGGAATCCACTTCAGGGTGGGTTACCTGATTAT-----CGACTGCCTGGATGAAGGC-TCAGCTGAGTGGCTCAAGATTGCCGTACCTCAGCCGCGGACGTGGAAGGGAGTACCCCTAGAGAC--CCGCACGGGA
droFic1	scf7180000453956:6233-6389 -		CGTCG------------------GCATGGGACACGGCAGTCGCGTTTTGAGGCATCCACTTCAGGGTAGGATACCTCCTTAT-----CGACTGCCTGGGCCGGA-T-TCAGCGGACTGGCTGAGGGCCGTTGTGCCCATGCTCAGAACGTGCAAGGGCGTGCCCCTAGATAC--CAGGGTGGGA
droAna3	scaffold_13266:15927220-15927341 +		GTCCAGGGCCTGGGTGTAGTTTGGAACATTGTTCTCCAATCCGGTTAGATTGAACTTAT-----------CCTCCAAATAGTCGAATGGAACGCGGCAAAGGAACTCA---------------------------------------------------TTGCCCTGGAGATTCAGGAACCAGC
droBip1	scf7180000396567:419008-419054 +		GCCTG-------GGAGTAGTTCTGCACGCTGTTCTCCAATCCCGTTAGGTTGAA----------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_7168:1860-2017 -		CGTCT------------------GATGGAGATGTCGCGGTCTCATTCGTGGGCATTCACTTCCGGGTTGGATTCCTGGTAAT-----TGAATGCTGCGATGAGACC-TCAGCCGATTGGCTAAGGATCGCAATTTCGAGGCTACAGTCGTGGAAGGGCGTGCCCCTTGAGTT--CAAGGTGGGG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSec2

GCCCA---TCT------------GTTTGGGATTCTCCAATCAAGTTTGGAGGAATCCACTTCATGGTGGGCCACCTGATAGT-----GGACTGCCGCAACGCAACC-ACTGCTGAGTGTCTGGAATCAGCAGTCCCCACCCTCAGTAAGTGGAGCGGTGTCTCCCTGGTGGT--AAGAATGGGC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........................................................................TGATAGT-----GGACTGCCGCAACGCAAC...............................................................................	25	20	12.05	241	216	0	20	5
...........................................................................TGATAGT-----GGACTGCCGCAACGC..................................................................................	22	20	2.60	52	27	0	25	0
...........................................................................TGATAGT-----GGACTGCCGCAACG...................................................................................	21	20	1.15	23	9	0	14	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCA.................................................................................	23	20	1.15	23	0	0	16	7
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTC.....................	22	20	0.45	9	2	0	6	1
...........................................................................TGATAGT-----GGACTGCCGCAAC....................................................................................	20	20	0.25	5	0	0	5	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTG.................	26	20	0.25	5	0	0	5	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAACC-A............................................................................	27	20	0.25	5	0	0	4	1
...........................................................................TGATAGT-----GGACTGCCGCAACGCAT................................................................................	24	20	0.15	3	3	0	0	0
..................................................................TGGGCCACCTGATAGT-----GGACTGCCGC.......................................................................................	26	20	0.15	3	2	0	0	1
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCT..................	25	20	0.15	3	2	0	1	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTC.......................	20	20	0.10	2	2	0	0	0
.....................................................................GCCACCTGATAGT-----GGACTGCCGCAACGC..................................................................................	28	20	0.10	2	2	0	0	0
..........................................................................CTGATAGT-----GGACTGCCGCAACGCAAC...............................................................................	26	20	0.10	2	2	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAGG....................................................................................................................................	26	20	0.10	2	2	0	0	0
..................................TCCAATCAAGTTTGGAGGAATCCACT............................................................................................................................	26	20	0.10	2	0	0	2	0
.........................TTGGGATTCTCCAATCAAGTTTGGAGG....................................................................................................................................	27	20	0.05	1	1	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCC...................	24	20	0.05	1	1	0	0	0
.........................................................................CCTGATAGT-----GGACTGCCGCAACGC..................................................................................	24	20	0.05	1	1	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCT......................	21	20	0.05	1	0	0	0	1
............................................................................GATAGT-----GGACTGCCGCAACG...................................................................................	20	20	0.05	1	1	0	0	0
....................................CAATCAAGTTTGGAGGAATCCACT............................................................................................................................	24	20	0.05	1	1	0	0	0
.......................................TCAAGTTTGGAGGAATCCACTTCA.........................................................................................................................	24	20	0.05	1	1	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTT.......................	20	20	0.05	1	0	0	1	0
...........................................................................TGATAGT-----GGACTGCCGCAACA...................................................................................	21	20	0.05	1	1	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCC....................	23	20	0.05	1	0	0	0	1
...........................................................................TGATAGT-----GGACTGCCGCAACGCAACC-T............................................................................	27	20	0.05	1	1	0	0	0
.........................TTGGGATTCTCCAATCAAGTTTGGAGGA...................................................................................................................................	28	20	0.05	1	1	0	0	0
.........................................................................................ACTGCCGCAACGCAACC-ACTGCTG......................................................................	24	20	0.05	1	1	0	0	0
.........................TTGGGATTCTCCAATCAAGTTTGGAG.....................................................................................................................................	26	20	0.05	1	0	0	1	0
............................................................................................................................................CTCAGTAAGTGGAGCGGTGTCTCCCTG.................	27	20	0.05	1	0	0	1	0

droSim2

CCTC----TCC------------GGTTGGGATTCTCCAATCAAGTTTGGAGGAATCCACTTCAGGGTGGGCCACCTGATAGT-----GGACTGCCGCAACGCAACC-ACTGCTGAGTGGCTGCAATCAGCAGTCCCCAGCCTCAGTAAGTGGAGCGGTGTCTCCCTGGAGGT--AAGGATGGGC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...........................................................................TGATAGT-----GGACTGCCGCAACGCAAC...............................................................................	25	20	86.05	1721	0	0	39	39	32	0	955	13	470	31	63	4	72	3	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGA......................................................................................................................................	24	20	41.60	832	0	0	0	12	0	0	0	586	85	131	18	0	0	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAGGA...................................................................................................................................	27	19	36.42	692	0	0	0	3	0	0	321	244	90	16	18	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCAGT...................................................	24	16	24.13	386	0	0	0	6	0	0	0	0	0	0	380	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTC.....................	22	20	23.20	464	0	1	0	7	33	0	38	59	84	34	183	24	1	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCC...................	24	20	20.30	406	0	0	0	12	264	0	6	12	1	0	107	4	0	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGG.......................................................................................................................................	23	20	19.95	399	0	0	0	1	0	0	101	207	40	48	2	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAACC-.............................................................................	26	20	16.25	325	0	0	11	12	64	64	138	1	33	1	0	0	1	0	0	0	0
...........................................................TTCAGGGTGGGCCACCTGATAGT-----GGAC.............................................................................................	27	12	12.92	155	0	0	1	0	0	0	4	1	5	0	142	1	1	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAGGAA..................................................................................................................................	28	17	12.88	219	0	0	0	1	0	0	96	21	44	11	46	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTG.........................	18	20	10.20	204	0	0	0	0	198	0	0	1	0	0	5	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCT......................	21	20	9.25	185	0	0	3	2	33	0	20	32	30	12	34	3	16	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTGGA...............	28	20	8.55	171	0	0	0	1	0	0	93	24	0	1	52	0	0	0	0	0	0
............................................................TCAGGGTGGGCCACCTGATAGT-----GGAC.............................................................................................	26	12	8.50	102	0	0	1	2	0	0	3	1	3	0	91	1	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCT..................	25	20	8.45	169	0	0	0	18	33	0	9	2	1	0	105	1	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCA.................................................................................	23	20	7.40	148	1	0	13	10	0	0	67	0	37	0	19	1	0	0	0	0	0
................................................................................................................................................GTAAGTGGAGCGGTGTCTCCCTG.................	23	20	6.50	130	0	0	0	0	0	0	0	0	0	0	130	0	0	0	0	0	0
...........................................................TTCAGGGTGGGCCACCTGATAGT-----GGA..............................................................................................	26	12	5.67	68	0	0	0	0	0	0	13	13	22	9	11	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTGG................	27	20	5.65	113	0	0	0	3	31	0	7	2	1	0	68	1	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAA................................................................................	24	20	5.60	112	0	0	2	2	0	0	63	0	36	2	0	0	5	2	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCAGTC..................................................	25	15	5.60	84	0	0	0	2	0	0	0	0	0	0	80	2	0	0	0	0	0
............................................................TCAGGGTGGGCCACCTGATAGT-----GGA..............................................................................................	25	12	5.17	62	0	0	0	2	0	0	28	8	16	2	4	0	2	0	0	0	0
......................................................TCCACTTCAGGGTGGGCCACCTGA..........................................................................................................	24	11	5.00	55	0	0	0	0	0	0	8	6	25	13	2	1	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTC.......................	20	20	5.00	100	0	0	0	1	66	0	0	15	8	3	0	3	4	0	0	0	0
.....................................................ATCCACTTCAGGGTGGGCCACCTGA..........................................................................................................	25	11	4.55	50	0	0	0	0	0	0	8	6	24	8	2	2	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTG.................	26	20	3.55	71	0	0	0	7	0	0	1	0	0	0	58	5	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGC..................................................................................	22	20	3.50	70	0	0	0	3	32	0	0	1	17	0	17	0	0	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGCGGTGTC.......................	24	20	3.25	65	0	0	0	0	0	0	0	0	0	0	63	1	1	0	0	0	0
.........................TTGGGATTCTCCAATCAAGTTTGGAGGA...................................................................................................................................	28	19	3.21	61	0	0	0	2	0	0	38	9	11	1	0	0	0	0	0	0	0
..................................TCCAATCAAGTTTGGAGGAATCCACT............................................................................................................................	26	17	2.76	47	0	0	0	1	0	0	12	5	14	5	10	0	0	0	0	0	0
...........................................................TTCAGGGTGGGCCACCTGATAGT-----GGACT............................................................................................	28	12	2.67	32	0	0	0	0	0	0	7	13	1	10	1	0	0	0	0	0	0
.............................................TTGGAGGAATCCACTTCAGGGTGGGC.................................................................................................................	26	12	2.08	25	0	0	1	2	0	0	0	0	0	0	20	2	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAAC....................................................................................	20	20	1.90	38	0	0	0	0	34	0	1	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCC....................	23	20	1.60	32	0	0	0	10	0	0	8	8	3	1	0	2	0	0	0	0	0
.....................................................................................................................................................TGGAGCGGTGTCTCCCTGGAG..............	21	20	1.60	32	0	0	0	0	30	0	0	0	0	0	2	0	0	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAGG....................................................................................................................................	26	20	1.55	31	0	0	0	3	0	0	5	4	1	0	18	0	0	0	0	0	0
................................................................................................................................................GTAAGTGGAGCGGTGTCTCCCT..................	22	20	1.30	26	0	0	0	0	0	0	0	0	0	0	26	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGT........................	19	20	1.30	26	0	0	0	0	0	0	0	5	5	0	13	2	1	0	0	0	0
............................................................................................GCCGCAACGCAACC-ACTGCTGA.....................................................................	22	20	1.25	25	0	0	0	0	0	0	1	12	1	9	1	0	1	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCAG....................................................	23	16	1.19	19	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	0
............................................TTTGGAGGAATCCACTTCAGGGTGGGC.................................................................................................................	27	12	1.17	14	0	0	0	0	0	0	0	0	0	0	13	1	0	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAG.....................................................................................................................................	25	20	1.10	22	0	0	0	2	0	0	2	5	1	0	12	0	0	0	0	0	0
............................................................TCAGGGTGGGCCACCTGATAGT-----GGACT............................................................................................	27	12	1.08	13	0	0	0	0	0	0	1	6	2	3	0	0	1	0	0	0	0
.............................................................CAGGGTGGGCCACCTGATAGT-----GGAC.............................................................................................	25	12	1.08	13	0	0	0	1	0	0	0	0	0	0	12	0	0	0	0	0	0
.........................TTGGGATTCTCCAATCAAGTTTGGAGGAA..................................................................................................................................	29	17	0.94	16	0	0	0	0	0	0	12	1	0	0	3	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGT..........................	17	20	0.90	18	0	0	0	0	0	0	1	4	0	0	13	0	0	0	0	0	0
........................................................................ACCTGATAGT-----GGACTGCCGCAACGCAAC...............................................................................	28	20	0.85	17	0	0	0	0	0	0	4	3	2	1	0	0	7	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGCGGTGT........................	23	20	0.80	16	0	0	0	0	0	0	0	0	0	0	16	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAAA...............................................................................	25	20	0.80	16	0	0	0	0	0	0	2	0	3	2	1	0	8	0	0	0	0
................................................................................................................................................GTAAGTGGAGCGGTGTCTCCCTGG................	24	20	0.75	15	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGC.............................	18	20	0.75	15	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0
..................................................................TGGGCCACCTGATAGT-----GGACTGCCGC.......................................................................................	26	12	0.75	9	0	0	0	2	0	0	0	0	0	0	7	0	0	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGCGGTG.........................	22	20	0.70	14	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAACC-A............................................................................	27	20	0.70	14	0	0	0	9	0	0	1	0	1	0	2	1	0	0	0	0	0
.....................................................................................................................................................TGGAGCGGTGTCTCCCTGGAGGT--AAGG......	27	15	0.67	10	0	0	0	1	0	0	2	0	1	2	4	0	0	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGCGGTGTCTC.....................	26	20	0.65	13	0	0	0	0	0	0	0	0	0	0	12	1	0	0	0	0	0
......................................................TCCACTTCAGGGTGGGCCACCTGATAGT-----.................................................................................................	28	11	0.64	7	0	0	0	1	0	0	0	0	0	0	6	0	0	0	0	0	0
........................................................CACTTCAGGGTGGGCCACCTGATAGT-----.................................................................................................	26	11	0.64	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
..........................................................................CTGATAGT-----GGACTGCCGCAACGCAAC...............................................................................	26	20	0.60	12	0	0	0	0	0	0	2	3	5	0	0	0	2	0	0	0	0
.............................................TTGGAGGAATCCACTTCAGGGTGGGCC................................................................................................................	27	12	0.58	7	0	0	1	1	0	0	0	0	0	0	5	0	0	0	0	0	0
..................................................................................................................................................AAGTGGAGCGGTGTCTC.....................	17	20	0.55	11	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0
.............................................................................................................................TCAGCAGTCCCCAGCC...........................................	16	15	0.53	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
..................................................................................................................................................AAGTGGAGCGGTGTCTCCC...................	19	20	0.50	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
..............................................................AGGGTGGGCCACCTGATAGT-----GGACT............................................................................................	25	12	0.50	6	0	0	0	0	0	0	2	1	1	0	2	0	0	0	0	0	0
..............................................................................................CGCAACGCAACC-ACTGCTGAGTGGC................................................................	25	20	0.50	10	0	0	1	2	0	0	0	0	0	0	7	0	0	0	0	0	0
.........................TTGGGATTCTCCAATCAAGTTTGGA......................................................................................................................................	25	20	0.50	10	0	0	0	3	0	0	6	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................TGGAGCGGTGTCTCCCTGGAGGT--A.........	24	20	0.50	10	0	0	0	0	0	0	1	0	0	0	9	0	0	0	0	0	0
................................................................................................................................................GTAAGTGGAGCGGTGTCTC.....................	19	20	0.50	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
.............................................................................................................................................................TGTCTCCCTGGAGGT--AAGGATGGG.	24	17	0.47	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
.....................................................................................................................................................TGGAGCGGTGTCTCCCTGGAGGT--AAG.......	26	15	0.47	7	0	0	0	0	0	0	0	0	1	0	6	0	0	0	0	0	0
....................................................AATCCACTTCAGGGTGGGCCACCTGA..........................................................................................................	26	11	0.45	5	0	0	0	0	0	0	1	1	1	1	1	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTGT................	27	20	0.45	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTT.....................	22	20	0.45	9	0	0	0	0	0	0	0	3	2	3	1	0	0	0	0	0	0
...................................................................................................................................................AGTGGAGCGGTGTCTCCCTG.................	20	20	0.45	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTA.....................	22	20	0.45	9	0	0	0	0	0	0	0	0	0	3	5	0	1	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAGT....................................................................................................................................	26	20	0.45	9	0	0	0	0	0	0	0	1	0	0	8	0	0	0	0	0	0
...........................................................TTCAGGGTGGGCCACCTGATAGT-----GG...............................................................................................	25	12	0.42	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..............................................TGGAGGAATCCACTTCAGGGTGGGC.................................................................................................................	25	12	0.42	5	0	0	0	3	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................................TGTCTCCCTGGAGGT--AAGGATGGGC	25	17	0.41	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGCG............................	19	20	0.40	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
............................................................................................GCCGCAACGCAACC-ACTGCTGAGA...................................................................	24	20	0.40	8	0	0	0	0	0	0	0	3	0	5	0	0	0	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAGGT...................................................................................................................................	27	20	0.40	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCTT...................	24	20	0.40	8	0	0	0	0	0	0	3	4	0	0	1	0	0	0	0	0	0
........................................................................ACCTGATAGT-----GGACTGCCGCAACGC..................................................................................	25	20	0.40	8	0	0	0	0	0	0	4	1	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGGAGCGGTGTCTCCCTGGAGGT--AAGGA.....	28	14	0.36	5	0	0	0	1	0	0	0	0	1	0	2	0	1	0	0	0	0
..............................................................................TAGT-----GGACTGCCGCAACGCAAC...............................................................................	22	20	0.35	7	0	0	0	0	0	0	2	0	0	0	1	0	2	2	0	0	0
.......................................................................CACCTGATAGT-----GGACTGCCGCAACGCAAC...............................................................................	29	20	0.35	7	0	0	1	0	0	0	2	0	0	0	0	0	4	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCA......................................................................................	18	20	0.35	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
...............................................................................................................................................AGTAAGTGGAGCGGTGTCTCCCTG.................	24	20	0.35	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGC.......................................................................................	17	20	0.35	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.....................................................................................................................................................TGGAGCGGTGTCTCCCTGGAGGT--AA........	25	20	0.35	7	0	0	0	0	0	0	0	0	1	0	6	0	0	0	0	0	0
...............................................................................................................................................AGTAAGTGGAGCGGTGTCTCCCT..................	23	20	0.35	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
..............................................................AGGGTGGGCCACCTGATAGT-----GGAC.............................................................................................	24	12	0.33	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...........................................................TTCAGGGTGGGCCACCTGATAGT-----GGACA............................................................................................	28	12	0.33	4	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	0
..............................................................................................................GCTGAGTGGCTGCAATCAGCAGT...................................................	23	16	0.31	5	0	0	0	2	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCAGTA..................................................	25	16	0.31	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.....................................AATCAAGTTTGGAGGAATCCACTTC..........................................................................................................................	25	13	0.31	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.........................TTGGGATTCTCCAATCAAGTTTGGAGG....................................................................................................................................	27	20	0.30	6	0	0	0	2	0	0	2	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGG...........................	16	20	0.30	6	0	0	0	0	0	0	0	1	1	2	2	0	0	0	0	0	0
.......................................................................CACCTGATAGT-----GGACTGCCGCAACGC..................................................................................	26	20	0.30	6	0	0	2	0	0	0	3	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCA....................	23	20	0.30	6	0	0	0	0	0	0	0	3	0	0	3	0	0	0	0	0	0
........................................................................................................................................................AGCGGTGTCTCCCTGGAGGT--AAGGA.....	25	14	0.29	4	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCAGTCC.................................................	26	15	0.27	4	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0
...........................GGGATTCTCCAATCAAGTTTGGAGGA...................................................................................................................................	26	19	0.26	5	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0
..............................................TGGAGGAATCCACTTCAGGGTGGGCC................................................................................................................	26	12	0.25	3	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCG........................................................................................	16	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAT.....................................................................................................................................	25	20	0.25	5	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0
.......................................TCAAGTTTGGAGGAATCCACTTCAGG.......................................................................................................................	26	12	0.25	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................GTAAGTGGAGCGGTGTCTCCC...................	21	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
...........................................................TTCAGGGTGGGCCACCTGATA........................................................................................................	21	12	0.25	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTA.......................	20	20	0.25	5	0	0	0	0	0	0	0	2	1	1	0	0	1	0	0	0	0
...................................................................................................................................................AGTGGAGCGGTGTCTCCCTGGA...............	22	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..............................................................................TAGT-----GGACTGCCGCAACGCAACC-.............................................................................	23	20	0.25	5	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	0	0
.....................................................................................................................................CCCCAGCCTCAGTAAGTGGAGCGG...........................	24	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..........................................................................................................................................GCCTCAGTAAGTGGAGCGGTGTCTC.....................	25	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCT....................	23	20	0.25	5	0	0	0	0	0	0	1	0	0	0	4	0	0	0	0	0	0
..................................................................................................................................................AAGTGGAGCGGTGTCTCCCT..................	20	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.........................................................................CCTGATAGT-----GGACTGCCGCAACGCAAC...............................................................................	27	20	0.25	5	0	0	0	0	0	0	1	1	1	0	0	0	2	0	0	0	0
............................................................TCAGGGTGGGCCACCTGATAGT-----GG...............................................................................................	24	12	0.25	3	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0
.................................................................................................................................................TAAGTGGAGCGGTGTCTCCCT..................	21	20	0.25	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
.............................................................CAGGGTGGGCCACCTGATAGT-----GGA..............................................................................................	24	12	0.25	3	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0
.......................................TCAAGTTTGGAGGAATCCACT............................................................................................................................	21	19	0.21	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
............................................................................................GCCGCAACGCAACC-ACTGCTGAGTG..................................................................	25	20	0.20	4	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTGGAGG.............	30	20	0.20	4	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TCCCCAGCCTCAGTAAGTGGAGCGG...........................	25	20	0.20	4	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGCGG...........................	20	20	0.20	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.........................................................................................................................................AGCCTCAGTAAGTGGAGCGGT..........................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..................................................................................................................................................AAGTGGAGCGGTGTCTCCCTG.................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAACA-.............................................................................	26	20	0.20	4	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0
...................................................................................................................................................AGTGGAGCGGTGTCTC.....................	16	20	0.20	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCG............................	15	20	0.20	4	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTGGAT..............	29	20	0.20	4	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCAGTCCC................................................	27	15	0.20	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
................................................................................................................TGAGTGGCTGCAATCAGCAGTCCCC...............................................	25	15	0.20	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.........................................AAGTTTGGAGGAATCCACT............................................................................................................................	19	20	0.20	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCT...................	24	20	0.20	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..................................................................................................................................................AAGTGGAGCGGTGTC.......................	15	20	0.20	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCAGTCCCC...............................................	28	15	0.20	3	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAAG...............................................................................	25	20	0.20	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................TGAGTGGCTGCAATCAGCA.....................................................	19	16	0.19	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................TGGAGGAATCCACTTCAGGGTGGGCCACC.............................................................................................................	29	11	0.18	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................CACTTCAGGGTGGGCCACCTGATAGT-----GGA..............................................................................................	29	11	0.18	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
......................................................TCCACTTCAGGGTGGGCCACCTGAT.........................................................................................................	25	11	0.18	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................................TGTCTCCCTGGAGGT--AAGGATGG..	23	17	0.18	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................................TGTCTCCCTGGAGGT--AAGGATGGGT	25	17	0.18	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................................TGTCTCCCTGGAGGT--AAGGATG...	22	17	0.18	3	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0
..................................TCCAATCAAGTTTGGAGGAATCCAC.............................................................................................................................	25	17	0.18	3	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
............................................TTTGGAGGAATCCACTTCAGGGTGGGCC................................................................................................................	28	12	0.17	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
........................................CAAGTTTGGAGGAATCCACTTCAGG.......................................................................................................................	25	12	0.17	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
............................................................TCAGGGTGGGCCACCTGATAGT-----G................................................................................................	23	12	0.17	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..............................................TGGAGGAATCCACTTCAGGGTGGGCCA...............................................................................................................	27	12	0.17	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..................................................................TGGGCCACCTGATAGT-----GGA..............................................................................................	19	12	0.17	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.....................................................................................................................................................................TGGAGGT--AAGGATGGGC	17	19	0.16	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
................................................................................................................................................GTAAGTGGAGCGGTGTCTCCCTGGA...............	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCTGGAC..............	29	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................TTTGGAGGAATCCACTTCAGGGTGGGA.................................................................................................................	27	20	0.15	3	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0
..............................................................................................................................................CAGTAAGTGGAGCGGTGTCT......................	20	20	0.15	3	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0
............................................TTTGGAGGAATCCACTTCAGGGTG....................................................................................................................	24	20	0.15	3	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.......................................................................CACCTGATAGT-----GGACTGCCGCAACGCA.................................................................................	27	20	0.15	3	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
..............................................................................................................................................CAGTAAGTGGAGCGGTGTCTC.....................	21	20	0.15	3	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCC.........................................................................................	15	20	0.15	3	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0
..............................................................................................................................................CAGTAAGTGGAGCGGTGTCTCCC...................	23	20	0.15	3	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................................TAGT-----GGACTGCCGCAACGCAACC-AC...........................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
...........................GGGATTCTCCAATCAAGTTTGGA......................................................................................................................................	23	20	0.15	3	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AGTGGAGCGGTGTCTCCCT..................	19	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
...........................................................................................TGCCGCAACGCAACC-ACTGCTGAG....................................................................	24	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................................................TAGT-----GGACTGCCGCAACGCAACC-A............................................................................	24	20	0.15	3	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0
.........................................................................CCTGATAGT-----GGACTGCCGCAACGC..................................................................................	24	20	0.15	3	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAAT...............................................................................	25	20	0.15	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................CTCAGTAAGTGGAGCGGTGTCT......................	22	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCTCCCA..................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................TGGGATTCTCCAATCAAGTTTGGAAA....................................................................................................................................	26	20	0.15	3	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0
............................................................................................................................................CTCAGTAAGTGGAGCGGTGTCTC.....................	23	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
............................................................................GATAGT-----GGACTGCCGCAACGCAAC...............................................................................	24	20	0.15	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CACCTGATAGT-----GGACTGCCGCAA.....................................................................................	23	20	0.15	3	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGTGTCA......................	21	20	0.15	3	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0
..........................................................................................................................................GCCTCAGTAAGTGGAGCGGTGTCTCCC...................	27	20	0.15	3	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0
...............................................................................................................................................AGTAAGTGGAGCGGTGTCTCCCTGG................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
............................................................................................................................................CTCAGTAAGTGGAGCGGTGTCTCCC...................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
............................................................................................GCCGCAACGCAACC-ACTGCTGAG....................................................................	23	20	0.15	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
...........................................................................TGATAGT-----GGACTGCCGCAACGCAT................................................................................	24	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................TGGAGGAATCCACTTCAGGGTGGGA.................................................................................................................	25	20	0.15	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CCCCAGCCTCAGTAAGTGGAGCG............................	23	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
............................................................................................................................................CTCAGTAAGTGGAGCGGTGTCTCCCTGGA...............	29	20	0.15	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................TCAGTAAGTGGAGCGGA..........................	17	20	0.15	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................CTCAGTAAGTGGAGCGGTGTCTCCCTGG................	28	20	0.15	3	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0
.................................................................................T-----GGACTGCCGCAACGCAACC-ACTGC........................................................................	25	20	0.15	3	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0
...........................................................................................................................AATCAGCAGTCCCCAGCCTCAGTAAG...................................	26	14	0.14	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
........................................................................................................................TGCAATCAGCAGTCCCCAG.............................................	19	15	0.13	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
.........................................................................................................C-ACTGCTGAGTGGCTGCAATCAGCAGT...................................................	27	15	0.13	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CTGCTGAGTGGCTGCAATCAG.......................................................	21	15	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
........................................................................................................................TGCAATCAGCAGTCCCCAGC............................................	20	15	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................AATCAGCAGTCCCCAGC............................................	17	15	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
........................................................................................................................TGCAATCAGCAGTCCCCAGCC...........................................	21	15	0.13	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................ATCAGCAGTCCCCAGCC...........................................	17	15	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGCA.....................................................	22	16	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
................................................................................................................TGAGTGGCTGCAATCAGC......................................................	18	16	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
................................................................................................................TGAGTGGCTGCAATCAGCAGT...................................................	21	16	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAGC......................................................	21	16	0.13	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................TGCTGAGTGGCTGCAATCAG.......................................................	20	16	0.13	2	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0

dm3

CCTC----TCT------------GGTTGGGATTCTTCAATTAAGTTTGGAGGAATCCACTTCAGGGTGGGTCACCTGATAGT-----GGATTGCCGCAACGCAACC-ACTGCTGAGTGGCTGCAATTAGCAGTCCCCACCCTCAGTAAGTGGAGCGGTGTCTCCCTGGAGGC--AAAGATGGGC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..................................TTCAATTAAGTTTGGAGGAATCCACT............................................................................................................................	26	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TTAAGTTTGGAGGAATCCACT............................................................................................................................	21	18	5.00	90	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	1	0	0	1	0	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	3	0	4	0	2	0	1	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	2	1	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	14	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	6	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	6	0	0	0	0	0	0	0	0
...........................................................................TGATAGT-----GGATTGCCGCAACG...................................................................................	21	20	4.95	99	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	31	0	0	3	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	8	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................TGGGATTCTTCAATTAAGTTTGGA......................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................CCCACCCTCAGTAAGTGGAGCGG...........................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...........................................................................................................................................CCTCAGTAAGTGGAGCGGTGT........................	21	20	1.85	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	0	1	0	1	4	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................TGGGTCACCTGATAGT-----GGATT............................................................................................	21	20	1.80	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	2	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0
.................................................................GTGGGTCACCTGATAGT-----GGAT.............................................................................................	21	20	1.75	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	2	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	4	0	0	0	0	1	2	1	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................TTGGAGGAATCCACTTCAGGGTGGGT.................................................................................................................	26	20	1.65	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	2	1	4	0	6	0	1	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	0	0	0	0
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.........................................................................................................................................................GCGGTGTCTCCCTGGAGGC--AAAGATGG..	27	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................................TTAAGTTTGGAGGAATCCACTTCAGG.......................................................................................................................	26	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................AGGGTGGGTCACCTGATAGT-----GGATTGC..........................................................................................	27	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TTAAGTTTGGAGGAATCCACTTC..........................................................................................................................	23	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................AGGGTGGGTCACCTGATAGT-----GGATTG...........................................................................................	26	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................GGGTGGGTCACCTGATAGT-----GGATTGC..........................................................................................	26	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................TTCAGGGTGGGTCACCTGATAGT-----GGATT............................................................................................	28	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................GGGTGGGTCACCTGATAGT-----GGATTG...........................................................................................	25	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTCACCTGATAGT-----GGATTGCCGCAACG...................................................................................	27	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................TCACCTGATAGT-----GGATTGCCGCAACGCA.................................................................................	28	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GCCCG---TCA------------GGTTGAACTTGTCC---------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

GCCCG---TCA------------GGTTGAACTTGTCT-----------------------------------TCTATGAAGTCGGT-----------------------------------------------------------------------------------------------GGG

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEug1

GTCCAAAGTCT------------GGCTAAAATACTCCAGGCCAGT-------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CCTCA--------------------------------------------------------------------------------------------------------------------------------------GTTGCGGACGTGGAAGGGAGTACCCCTAGAAAC--CCGCACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GCTCACG-TCA------------GCGTGGAGCGGTCCCGTCGTGTTCAGGGGAATCCACTTCAGGGTGGGTTACCTGATTAT-----CGACTGCCTGGATGAAGGC-TCAGCTGAGTGGCTCAAGATTGCCGTACCTCAGCCGCGGACGTGGAAGGGAGTACCCCTAGAGAC--CCGCACGGGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CGTCG------------------GCATGGGACACGGCAGTCGCGTTTTGAGGCATCCACTTCAGGGTAGGATACCTCCTTAT-----CGACTGCCTGGGCCGGA-T-TCAGCGGACTGGCTGAGGGCCGTTGTGCCCATGCTCAGAACGTGCAAGGGCGTGCCCCTAGATAC--CAGGGTGGGA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

GTCCAGGGCCTGGGTGTAGTTTGGAACATTGTTCTCCAATCCGGTTAGATTGAACTTAT-----------CCTCCAAATAGTCGAATGGAACGCGGCAAAGGAACTCA---------------------------------------------------TTGCCCTGGAGATTCAGGAACCAGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

GCCTG-------GGAGTAGTTCTGCACGCTGTTCTCCAATCCCGTTAGGTTGAA----------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droGri2

CGTCT------------------GATGGAGATGTCGCGGTCTCATTCGTGGGCATTCACTTCCGGGTTGGATTCCTGGTAAT-----TGAATGCTGCGATGAGACC-TCAGCCGATTGGCTAAGGATCGCAATTTCGAGGCTACAGTCGTGGAAGGGCGTGCCCCTTGAGTT--CAAGGTGGGG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.....................................................................................................................................TTCGAGGCTACAGTCGTGGAAGGGC..........................	25	20	1.20	24	0	24
.....................................................................................................................................TTCGAGGCTACAGTCGTGGAAGGGCG.........................	26	20	0.45	9	0	9
.....................................................................................................................................TTCGAGGCTACAGTCGTGGAAGGGG..........................	25	20	0.05	1	0	1

dse_785

scaffold_1108:9029-9089 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-16.5	-16.0