ID:

dse_772

 Coordinate:

scaffold_11:895962-896112 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.8 -18.8 -18.6

Flybase annnotation

CDS [Dsec\GM22170-cds]; exon [dsec_GLEANR_4964:4]; intron [Dsec\GM22170-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAATGGTTTGTGCAGCCCTGCACTTCCAGCGATCGCCTCTTTGGACGCAGGTATGTGACCGTAATGTAGGGTTTAGATAGAGACTGTTCGGATGAATGCCCTAACTTTTGTGAAAATGCTTAGAATTGCTTCCAATTCACAATATGGCAATATCCTAGAAAAATGAACAGGAACTCTGTGCAATGGCATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTCCTAGACTATTTGATTCTATTATA
**************************************************************************************((((((((..((((.((....(((((((...((........))......))))))))).)))).)))))..)))...((.((((.....)))).))....***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V115
head
 V114
embryo
 V113
male body
...........................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACA.......................... 22 0 1 8.00 8 2 3 0 3
.....................................................................................................................................................................AACAGGAACTCTGTGCAATGG................................................................. 21 0 1 7.00 7 5 1 0 1
......................................................................................TTCGGATGAATGCCCTAACTTTTGTGA.......................................................................................................................................... 27 0 1 5.00 5 4 0 0 1
......................................................................................TTCGGATGAATGCCCTAACTTTTGTG........................................................................................................................................... 26 0 1 4.00 4 3 0 0 1
......................................................................................TTCGGATGAATGCCCTAACTTTTGT............................................................................................................................................ 25 0 1 3.00 3 3 0 0 0
................................................................................................................................................................................TGTGCAATGGCATTGAAGCTTGTGGCA................................................ 27 0 1 2.00 2 0 2 0 0
...........................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGA............................ 20 0 1 2.00 2 0 2 0 0
............................................................................................TGAATGCCCTAACTTTTGTGAAAATG..................................................................................................................................... 26 0 1 2.00 2 2 0 0 0
........................................................................................................................................................................AGGAACTCTGTGCAATGG................................................................. 18 0 1 2.00 2 1 0 1 0
........................................................................................................................................................................AGGAACTCTGTGCAATGGCATT............................................................. 22 0 1 2.00 2 0 0 2 0
.........................................................................................GGATGAATGCCCTAACTTTTGTG........................................................................................................................................... 23 0 1 2.00 2 2 0 0 0
......................................................................................................................................................TATCCTAGAAAAATGAACAGGAAC............................................................................. 24 0 1 2.00 2 2 0 0 0
................................................................................................................................................................................TGTGCAATGGCATTGAAGCT....................................................... 20 0 1 2.00 2 0 2 0 0
.....................................................................................................TAACTTTTGTGAAAATGCT................................................................................................................................... 19 0 1 1.00 1 0 0 1 0
......................................................................................TTCGGATGAATGCCCTAACTTTTG............................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................CCTAGAAAAATGAACAGGAACTC........................................................................... 23 0 1 1.00 1 1 0 0 0
......................................................................................TTCGGATGAATGCCCTAACTTT............................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.....................ACTTCCAGCGATCGCCTC.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0
...............................................................................................................................................................................CTGTGCAATGGCATTGAAGCTT...................................................... 22 0 1 1.00 1 0 1 0 0
......................................................................................TTCGGATGAATGCCCTAACTT................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0
...............................................................................................ATGCCCTAACTTTTGTGAAAATGCTT.................................................................................................................................. 26 0 1 1.00 1 0 0 0 1
.............................................................................................GAATGCCCTAACTTTTGTGAAAATGCT................................................................................................................................... 27 0 1 1.00 1 0 0 0 1
..........................................................................................GATGAATGCCCTAACTTTTGTGA.......................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...........................................................................................ATGAATGCCCTAACTTTTGT............................................................................................................................................ 20 0 1 1.00 1 0 0 0 1
.......................................................................................................................................................ATCCTAGAAAAATGAACAGGA............................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................AACAGGAACTCTGTGCAATGGT................................................................ 22 1 1 1.00 1 1 0 0 0
......................................................................................................................................................................................ATGGCATTGAAGCTTGTGGCAT............................................... 22 0 1 1.00 1 0 1 0 0
...........................................................................................................................................................................................................TTGCATCGTTCTTCCTGCG............................. 19 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................CATCGTTCTTCCTGCGACATTCC...................... 23 0 1 1.00 1 0 0 1 0
..........................................................................................................................................................................GAACTTTGTGCAATGGCATT............................................................. 20 1 1 1.00 1 0 0 1 0
...........................................................................................................................................................TAGAAAAATGAACAGGAACT............................................................................ 20 0 1 1.00 1 0 1 0 0
......................................................................................TTCGGATGAATGCCCTAACTTTT.............................................................................................................................................. 23 0 1 1.00 1 0 0 1 0
......................................................................................TTCGGATGAATGCCCTAACTTTTGTGAA......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................GCATTGCATCGTTCTTCCTGC.............................. 21 0 1 1.00 1 0 0 1 0
.......................................................................................................................................................ATCCTAGAAAAATGAACAGGAACT............................................................................ 24 0 1 1.00 1 0 1 0 0
............................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACGTTC....................... 24 1 1 1.00 1 1 0 0 0
......................................................................................TTCGGATGAATGCCCTAACT................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0
...........................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACAT......................... 23 0 1 1.00 1 1 0 0 0
..................................................................................................................AATGCTTAAAATTGCTTCCAATTCACA.............................................................................................................. 27 1 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................TGAAGCTTGTGGCATTGC............................................ 18 0 1 1.00 1 0 0 1 0
................................................................................................................................................................................................AGCTTGTGGCATTGCATCGTTCTTCCTGC.............................. 29 0 1 1.00 1 0 0 0 1
.....................................................................................................................................................ATATCCTAGAAAAATGAACAGGAACT............................................................................ 26 0 1 1.00 1 0 0 1 0
..........................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACATTC....................... 26 0 1 1.00 1 0 0 0 1
......................................................................................TTCGGATGAATGCCCTAAC.................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0
..........................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACATTCC...................... 27 0 1 1.00 1 0 0 1 0
..........................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGAC........................... 22 0 1 1.00 1 0 1 0 0
.......................................................................................TCGGATGAATGCCCTAACTTTTGTG........................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTC....................... 24 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTCC...................... 25 0 1 1.00 1 0 0 1 0
.......................................................................................................................TTAGAATTGCTTCCAATTCACA.............................................................................................................. 22 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................TGAAGCTTGTGGCATTGCATC......................................... 21 0 1 1.00 1 0 0 1 0
.....................................................................................................................................................................AACAGGAACTATGTGCAATGG................................................................. 21 1 1 1.00 1 1 0 0 0
..................................................................................................................................................................ATGAACAGGAACTCTGTGCAATGG................................................................. 24 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................CATTGCATCGTTCTTCCTGCGACA.......................... 24 0 1 1.00 1 0 0 0 1
................................................................................................................................................................................TGTGCAATGGCATTGAAGCTTGGGGCA................................................ 27 1 1 1.00 1 0 1 0 0
........................................................................................................................................................TCCTAGAAAAATGAACAGGAACT............................................................................ 23 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACA.......................... 23 0 1 1.00 1 0 0 0 1
..........................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGA............................ 21 0 1 1.00 1 0 0 0 1
............................................................................................................................................................................................TTGAAGCTTGTGGCATTGC............................................ 19 0 1 1.00 1 0 1 0 0
...........................................................................................................................................................................................................TTGCATCCTTCTTCCTGCGAC........................... 21 1 1 1.00 1 0 0 0 1
..........................................................................AGATACAGAGTGTTCGGAAG............................................................................................................................................................. 20 3 7 0.14 1 0 1 0 0

Anti-sense strand reads

TTTACCAAACACGTCGGGACGTGAAGGTCGCTAGCGGAGAAACCTGCGTCCATACACTGGCATTACATCCCAAATCTATCTCTGACAAGCCTACTTACGGGATTGAAAACACTTTTACGAATCTTAACGAAGGTTAAGTGTTATACCGTTATAGGATCTTTTTACTTGTCCTTGAGACACGTTACCGTAACTTCGAACACCGTAACGTAGCAAGAAGGACGCTGTAAGGATCTGATAAACTAAGATAATAT
*****************************************************************((((((((..((((.((....(((((((...((........))......))))))))).)))).)))))..)))...((.((((.....)))).))....************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V113
male body		 V115
head
 M054
female body
..............GGGGAAGTGAAGGTCGCTTG......................................................................................................................................................................................................................... 20 3 11 0.09 1 1 0 0
...............GGGACGTGAAGGTGGTTCG......................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0
.....................................................................................................................................................................................TTAGGTTAACTTCGAACAC................................................... 19 3 20 0.05 1 0 1 0
....................................................................................................................................................................................................................AGAAGGACCCTGTGAGGAC.................... 19 3 20 0.05 1 1 0 0
.................................................................................................................................AGGATTAAGTGTTATACAG....................................................................................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_11:895912-896162 - dse_772 AAATGGTTTGTGCAGCCCTGCACTTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGT----AA----TGTA-G-----------GGTTTAGATA-------------------------------------------------------GAGACTG-TTCGGATGAATGCCC-T---------AACTT--TTGTGAAAATGCTTAGAATTGCTTCCA----ATTCACAA-TA------TGGCAA----TATCCTAGAAAAATGA--------ACAGGAACTCTGTGCAATGGCATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTCCTA-GACT--ATTTGAT-T----CT--------------------------------------------------ATTATA
droSim2 3l:20560235-20560485 - dsi_26997 AAATGGTTTGTGCAGCCCTGCACTTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGT----AA----TGTA-A-----------GATTTAGATA-------------------------------------------------------GAGACTG-TTCGGATGAATGCCC-T---------AACTT--TTGTGAAAATGCTTAGAATTGTTTCCA----ATTCACAA-TA------TGGCAA----TATCCTAGAATAATGA--------ACAGGAACTCTGTGCAATGGCATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTCCTA-AACT--ATTTGAT-T----CT--------------------------------------------------ATTATA
dm3 chr3L:20999456-20999706 - AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGT----AA----TGAA-G-----------AGTTTAGACA-------------------------------------------------------GAGACTG-TTCGGATATATGCCT-T---------AACTT--TTGTGAAAATTCTGAGAATTGTTTCCA----ATTCACAA-TA------TGGCAA----TATCCTAGAATAATGA--------ACAGGAACTCTGTGCAATGGCATTGGAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTCCTA-AACT--ATTTGAT-T----CT--------------------------------------------------ATTATA
droEre2 scaffold_4784:20688683-20688954 - der_870 AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGG----AA----TGTA-G-----------GATATAGATT--------AAG--------------------------------ATATATCTATGAGAGATTG-TTTGGATATATGCCT-T---------AATTT--TTGTGAAAATGCTGAAAATTGTATCAA----GTTCACAT-TA------CGGCAA----TATCCCAGAATAATGA--------ACAGGAACTCTGTGCAATGACATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTC-TA-AACT--ATTTGAT-TAGTTAA-TCT----------------------------------------------CTCATA
droYak3 3L:19523188-19523450 + dya_829 AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GCCTGGATGTGC----AACA-G------------ATTCG----GTATAC-----------ATAT-A------------------------------CAGAGACTG-TTCGGATATATGCGT-T---------ATCTT--TTGTGAAAAAGCTGAAAATTTTATCAA----ATTCACAA-TA------CGGCAA----TATCCCAGAATAATGA--------ACAGGAACTCTGTGCAATGACATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTTCTC-ATCT--ATTTGAT-T----CT--------------------------------------------------CTCATA
droEug1 scf7180000409711:4992618-4992901 + AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGCAGGTTTGT-TATTTG----AA----ATTA----G-----AAC-A------------TCTA------------TAATCTA--------------------------------TCT-ATAGGATAAAGGTGT-C---------GATTC--ATGTGAAAATGCTGATAGTTAAATCCA----ATTCACAC-TA------TGGCCT----TATCCTAGAATAATGA--------ACAGGAACTCTGTGCAATGGCATCGAAGCCTGTGGCATTGCATCGTTCTTCCTGCAACATCAATA-AACC--ATTTAGT-T----AG-GTT------TCCAAAGTATGAAATTGTCAGTAAAATGTT----------GTTAT-
droBia1 scf7180000302193:5034929-5035182 + AAATGGTTCGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGAAGGTATGT-GACTT-----AC----TACA-T------------GTTTG----GGAAAC-----------GAAT-A----------------------------------ACCCC-TTAGGATAAAGGCCA-A---------ACATT--TTGTGAAAATGATGAAAA--GCTTCCC----ATTCGCAA-AT------AGGCCA----TATCCTAGAGCAATGAT-T-----TCAGGAACTCTGTGCAATGGCATTGAAGCTTGTGACGTTGCATCGTTCTTCCTGCGACATTTATA-AACA--AGTGCTT-T----AT--------------------------------------------------TTTCGA
droTak1 scf7180000415319:72368-72603 - AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGCAGGTATGT-GATTTA----AG----TAAA-G---------------------GGAAAC-----------TA--------------------------------------ACTCA-TTCGGATATGAACCT-T---------AACTG--ATGTGAAAATGCTGAGAATACCGTCCA----ATTCGCACATA------CGGTCA----CATCCTAGAATAAATAA-C-----TCAGGAACTCTGTGCAATGGCATTGAAGCTTGTGACATTGCATCGTTCTTCCTGCGACATTTACA-AAAT--AT---------------------------------------------------------------------
droEle1 scf7180000491193:2354128-2354363 + AAATGGTTTGTGCAGCCCTGCACTTCCAGCGATCGTCTCTTTGGCCGAAGGTAATGTTG-------------------------------CGTTTAAATAGGAAAT-----------TAAT-TGCT----------------------------------CATTCCGGATAAACCCCT-T---------AATTT--ATGCGAAATTGCTGAACATTTCTTCCA----ATTCGCAA-TT------TGGTAA----CATCCCAGAACAAAGA--------ACAGGAACTCTGTGCAATGGCATTAAAGCTTGTGACATTGCATCGTTCTTCCTGCGACATTTATA-AATT--A----------------------------------------------------------------------
droRho1 scf7180000779801:42094-42351 - AAATGGTTCGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGAAGGTATGA-TGTGTA----AA----TAAA--GAAATCAGTCA-A------------TCTA------------T-T----------------------------------ACCCT-ATTGGATAAAATACT-T---------AATTT--ATGCGAACATGCTGAAAATCACATCCA----ATTCGCAC-TA------AGACCA----TATCCTATAATAAAGA--------ACAGGAACTCTGTGCAATGGCATTGAAGCTTGTGACATTGCATCGTTCTTCCTGCGACATTTTCA-AAAAGCCTTTGCC-T----TA--------------------------------------------------CTTATA
droFic1 scf7180000453929:158744-159041 - AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGGAGGTAAAT-AAATA-----A-ATA----TT-CAA-----AAT-G------------TTTA------------CAATCGA---------------------------------AG-TTTGGATAAAGGCCT-C---------AAATTGAATGTGAAAATGCTGAAAACTTCGTCCA----ATTCGCAA-AA------TGGCCA---CAATCCTAGATTAAAGA--------TCAGGAACTCTGTGTAAGGACATTGAAGCTTGTGACCTTGCATCGTTCTTCCTGCGACATTTTAA-AGAT--CT-TTCT-T----AA-CTTCTGATAGCCGAAAAATAATACTGCTT-----ATGTAGTTTGCTTCCTACATT
droKik1 scf7180000302601:141986-142214 - AAATGGTTCGTGCAGCCTTGCACCTCTAGCGATCGACTTTTTGGACGCAGGTGAGA-ACGCC--------TT----TT-CGA-------------------AACCC------------CATTCTCT---------------------------------CTT-TTCGGATATTGGTCC-C---------TCAAC--ATGCAATAATGCTGAGAATGTTTTCCG----ACTTGCAT-AG------CGACCACAAATATCCTAGAATAAAGG--------TCAGGAACTCTGTGCAATGACATTGAAGCTTGTGACATTGCATCGTTCTTCCTGCGACACT----------------------------------------------------------------------------------
droAna3 scaffold_13337:8687366-8687613 + AAATGGTTCGTGCAGCCCTGCACTTCCAGCGATCGTCTTTTCGGAAGAAGGTGCGT-TTTTT-------T-TCGCCA-A-----------A--------AGGAT---------------------------------------------------------ATTAGGGATTAAGGTCC-T---------TGATT--ATGG-AAAGAGTGAAGAACAATCTACT----CTTTCCAT-TT------CGACCT----GATCCTAGATCAAAAA--------TCAGGAACTCTGTGTGGTGGCATTCAAGATTGTGGCACTTCATCGTTCTTCCTGAGACAGTTTTTTGACA-AATCTGAAAT----ATTTCC----------------------------------------------ATTAAA
droBip1 scf7180000396541:828582-828776 + AAGTGGTTTGTGCAGCCCTGCACTTCCAGCGATCGTCTTTTTGGAAGAAGGTGGGT-CTCTT-------T-TGGA-------------GA-T-A--------------------------------------------------------------TGACTT-CAAGGATAAAGGTCC-T---------TAAGT--ATGCAT-TGAGCTAAAAACACTCTACT----CCTTGCAT-TT------AGACCT----TGTCCTAGACCAAAAA--------TCAGAAACTCTGTGTAGTGGCATTGAAGCTAGTGACGCTA-------------------------------------------------------------------------------------------------------
dp5 XR_group6:1139996-1140227 + AAATGGTTCGTGCAGCCCTGCACGTCGAGCGATCGTCTCTTTGGACGCAGGTGAGT-GCCGTC----G-TTC----CT-CTG------------------AGGACT-----------TC-TCCTCCC---------------------------------AT-TGTGGATGCAGGGA--C---------AAACG--ATGTGGCAACGCTGACAGCT-TGGCCG----TTTCACAT-TC------CCCCCC--GTCATCCTAGAGCAAGGAC-C-----TCAGGAACTCTGTGCAGTGGCATCCCAGTCTGTGGCACTGCATCGTTCTTCCTGCTACATTC---------------------------------------------------------------------------------
droWil2 scf2_1100000004762:5395770-5396016 + AAATGGTTTGTACAACCTTGCACCTCAAGCGATCGTCTGTTTGGACGTAGGTGAGT-CGTCA-------G-TTAA----GAA--------A-----------------------AGACCAT-TGACC------------------------------ATTGT-GCGTGGGAAGCCAAT-T--------AAACTG--AAATGCAAGTGATGGAAATTGCTACCATTTGTTTGACAT-TG--AAAATGG-------CATCCTAGAGAAAATAATA-----AAAGGAACTCTGTGCGATTGCATTGAAGCTTATGGAATCGCATCGTTCTTCCTGTTACAGATCAA------------------------------------------------------------------------TATACA
droVir3 scaffold_13049:1943465-1943719 - AAATGGTTTGTGCAGCCGTGCACCTCCAGCGATCGTCTGTTTGGACGCAGGTGAGT-CGCAA-----------AAGG----------GAG-T-TCGGTTT--------T-GAGTCGGCC--------------------------------GGCAAAAGGGGTTGGGGATGCACTTGCTCCGCTAATGG---CG--GCGCCCAATTGCTGAGAATTGTTTCCG----TTGGGCGT-CC------TCGGCA--TGCATCCCAGATTAAATAC-CTTCAGACTGGAACTCTGTGCGGCCGCATTCCAGCCTGTGCGCTCGCATCGTTCTTCCAGGCACATT----------------------------------------------------------------------------------
droMoj3 scaffold_6654:1889385-1889632 + AAATGGTTCGTGCAGCCCTGCACTTCCAGCGATCGTCTCTTTGGGCGCAGGTGAGG-GATCCA----AT----CATA----------------------------------AATAT-TC------AACGAAAAAGGGGATGAAAT--GTTTCACAGAAACAG-TTTTGAT----------------------TG--TTGTGTATTCCATTGGAACTGCA--------------------------GGCAT---TCATCCCAGAGTAAACTATTTCCAGACTGGAACTCTGTGCGACTACATTGAAGCTTATGCAGTCGCATCGTTCTTCCAGCTACATTCCAG--AC-----TTG------------------------------------------------------------ATTTTA
droGri2 scaffold_15110:3007965-3008215 - AAGTGGTTCGTGCAGCCCTGCACTTCCAGCGATCGTCTCTTTGGACGCAGGTTAGT-TGACTT----CC----AGTG-G-----------AATGTTGTTT--------GAA--------------------------------AT--------------CTATTTCGGATGTACTTTC-CAACAAATTAAAC-----GGTTTAACGGCTGAGAGCAATTCCCG----TTGAACGT-TTTCCA---AAGCG----CATCCCAGATTAAATG--------ACTGGAACTCTGTGCGTGCGCATGGAAGTCTCTGAGCACGCATCGTTCTTCCAGTCACAATTCCC-AACT--TATT------------------------------------------------------------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AAATGGTTTGTGCAGCCCTGCACTTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGT----AA----TGTA-G-----------GGTTTAGATA-------------------------------------------------------GAGACTG-TTCGGATGAATGCCC-T---------AACTT--TTGTGAAAATGCTTAGAATTGCTTCCA----ATTCACAA-TA------TGGCAA----TATCCTAGAAAAATGA--------ACAGGAACTCTGTGCAATGGCATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTCCTA-GACT--ATTTGAT-T----CT--------------------------------------------------ATTATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACA....................................................................................2218.0082303
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATGG...........................................................................................................................2117.0075101
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTGA...........................................................................................................................................................................................................................2715.0054100
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTG............................................................................................................................................................................................................................2614.0043100
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGT.............................................................................................................................................................................................................................2513.0033000
................................................................................................................................................................................................................................................................................................TGTGCAATGGCATTGAAGCTTGTGGCA..........................................................................................................2712.0020002
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGA......................................................................................2012.0020002
.........................................................................................................................................................................TGAATGCCC-T---------AACTT--TTGTGAAAATG......................................................................................................................................................................................................................2612.0022000
........................................................................................................................................................................................................................................................................................AGGAACTCTGTGCAATGG...........................................................................................................................1812.0021010
........................................................................................................................................................................................................................................................................................AGGAACTCTGTGCAATGGCATT.......................................................................................................................2212.0020020
......................................................................................................................................................................GGATGAATGCCC-T---------AACTT--TTGTG............................................................................................................................................................................................................................2312.0022000
..............................................................................................................................................................................................................................................................TATCCTAGAAAAATGA--------ACAGGAAC.......................................................................................................................................2412.0022000
................................................................................................................................................................................................................................................................................................TGTGCAATGGCATTGAAGCT.................................................................................................................2012.0020002
...................................................................................................................................................................................T---------AACTT--TTGTGAAAATGCT....................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTG..............................................................................................................................................................................................................................2411.0011000
.................................................................................................................................................................................................................................................................CCTAGAAAAATGA--------ACAGGAACTC.....................................................................................................................................2311.0011000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--T................................................................................................................................................................................................................................2211.0011000
.....................ACTTCCAGCGATCGCCTC..............................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................................................................................................................................................CTGTGCAATGGCATTGAAGCTT................................................................................................................2211.0010001
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--.................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................ATGCCC-T---------AACTT--TTGTGAAAATGCTT...................................................................................................................................................................................................................2611.0010100
..........................................................................................................................................................................GAATGCCC-T---------AACTT--TTGTGAAAATGCT....................................................................................................................................................................................................................2711.0010100
.......................................................................................................................................................................GATGAATGCCC-T---------AACTT--TTGTGA...........................................................................................................................................................................................................................2311.0011000
........................................................................................................................................................................ATGAATGCCC-T---------AACTT--TTGT.............................................................................................................................................................................................................................2011.0010100
...............................................................................................................................................................................................................................................................ATCCTAGAAAAATGA--------ACAGGA.........................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATGGT..........................................................................................................................2211.0011000
......................................................................................................................................................................................................................................................................................................ATGGCATTGAAGCTTGTGGCAT.........................................................................................................2211.0010001
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCG.......................................................................................1911.0011000
..............................................................................................................................................................................................................................................................................................................................CATCGTTCTTCCTGCGACATTCC................................................................................2311.0010010
...................................................................................................................................................................................................................................................................TAGAAAAATGA--------ACAGGAACT......................................................................................................................................2011.0010001
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TT...............................................................................................................................................................................................................................2311.0010010
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTGAA..........................................................................................................................................................................................................................2811.0011000
........................................................................................................................................................................................................................................................................................................................GCATTGCATCGTTCTTCCTGC........................................................................................2111.0010010
...............................................................................................................................................................................................................................................................ATCCTAGAAAAATGA--------ACAGGAACT......................................................................................................................................2411.0010001
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACT....................................................................................................................................................................................................................................2011.0010010
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACAT...................................................................................2311.0011000
.............................................................................................................................................................................................................................................................................................................TGAAGCTTGTGGCATTGC......................................................................................................1811.0010010
................................................................................................................................................................................................................................................................................................................AGCTTGTGGCATTGCATCGTTCTTCCTGC........................................................................................2911.0010100
.........................................................................................................................................................................................................................................................A----TATCCTAGAAAAATGA--------ACAGGAACT......................................................................................................................................2611.0010010
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACATTC.................................................................................2611.0010100
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AAC.....................................................................................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACATTCC................................................................................2711.0010010
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGAC.....................................................................................2211.0010001
....................................................................................................................................................................TCGGATGAATGCCC-T---------AACTT--TTGTG............................................................................................................................................................................................................................2511.0011000
............................................................................................................................................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTC.................................................................................2411.0011000
............................................................................................................................................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTCC................................................................................2511.0010010
................................................................................................................................................................................................................TTAGAATTGCTTCCA----ATTCACA...........................................................................................................................................................................................2211.0011000
.............................................................................................................................................................................................................................................................................................................TGAAGCTTGTGGCATTGCATC...................................................................................................2111.0010010
..........................................................................................................................................................................................................................................................................ATGA--------ACAGGAACTCTGTGCAATGG...........................................................................................................................2411.0011000
.........................................................................................................................................................................................................................................................................................................................CATTGCATCGTTCTTCCTGCGACA....................................................................................2411.0010100
................................................................................................................................................................................................................................................................TCCTAGAAAAATGA--------ACAGGAACT......................................................................................................................................2311.0011000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACA....................................................................................2311.0010100
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGA......................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................TTGAAGCTTGTGGCATTGC......................................................................................................1911.0010001
droSim2
AAATGGTTTGTGCAGCCCTGCACTTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGT----AA----TGTA-A-----------GATTTAGATA-------------------------------------------------------GAGACTG-TTCGGATGAATGCCC-T---------AACTT--TTGTGAAAATGCTTAGAATTGTTTCCA----ATTCACAA-TA------TGGCAA----TATCCTAGAATAATGA--------ACAGGAACTCTGTGCAATGGCATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTCCTA-AACT--ATTTGAT-T----CT--------------------------------------------------ATTATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGAACT......................................................................................................................................241154.0015447149110000000001000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGA.........................................................................................................................................21198.00986118000000000100000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACT....................................................................................................................................................................................................................................20146.004613112200000000000000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATGG...........................................................................................................................21136.0036225500040000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACA....................................................................................22135.0035313100000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGAAC.......................................................................................................................................23121.0021104200000000005000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGAACTC.....................................................................................................................................25120.0020103600000000001000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTG............................................................................................................................................................................................................................26120.0020112520000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGG.........................................................................................................................................21119.0019011800000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AAC.....................................................................................................................................................................................................................................19117.0017102400100000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTGA...........................................................................................................................................................................................................................27116.0016011130001000000000
.........................................................................................................................................................................................................................................................A----TATCCTAGAATAATGA--------ACAGGAACT......................................................................................................................................26111.0011101000000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACA....................................................................................23111.001171200001000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGT.............................................................................................................................................................................................................................25111.001125130000000000000
................................................................................................................................................................................................................................................................TCCTAGAATAATGA--------ACAGGAACT......................................................................................................................................23110.001036000000000001000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATGGC..........................................................................................................................2219.00940210101000000000
..............................................................................................................................................................................................................................................................TATCCTAGAATAATGA--------ACAGGAACT......................................................................................................................................2519.00953100000000000000
................................................................................................................................................................................................................................................................TCCTAGAATAATGA--------ACAGGAAC.......................................................................................................................................2216.00640100000000001000
..............................................................................................................................................................................................................................................................TATCCTAGAATAATGA--------ACAGGA.........................................................................................................................................2216.00620400000000000000
......................................................................................................................................................................................................................................................................................ACAGGAACTCTGTGCAATGG...........................................................................................................................2015.00541000000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGAA........................................................................................................................................2215.00500300000000002000
.........................................................................................................................................................................................................................................................A----TATCCTAGAATAATGA--------ACAGGAAC.......................................................................................................................................2515.00532000000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTGAA..........................................................................................................................................................................................................................2815.00502030000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAG...........................................................................................................................................1914.00411200000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGAACC......................................................................................................................................2414.00400400000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACAT...................................................................................2414.00410000110010000000
..................................................................................................................................................................................................................................................................CTAGAATAATGA--------ACAGGAACT......................................................................................................................................2114.00401300000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACT....................................................................................2314.00431000000000000000
..............................................................................................................................................................................................................................................................TATCCTAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2613.00310200000000000000
.........................................................................................................................................................................................................................................................................................................................CATTGCATCGTTCTTCCTGCG.......................................................................................2113.00330000000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTGAAA.........................................................................................................................................................................................................................2913.00302100000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACT....................................................................................2213.00330000000000000000
............................................................................................................................................................................................................................................................................GA--------ACAGGAACTCTGTGCAATGGC..........................................................................................................................2312.00220000000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGC........................................................................................1812.00220000000000000000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATG............................................................................................................................2012.00200000020000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGAC.....................................................................................2112.00220000000000000000
...........................................................................................................................................................................................................................................................................TGA--------ACAGGAACTCTGTGCAA..............................................................................................................................2012.00210000100000000000
................................................................................................................................................................................................................................................................................................TGTGCAATGGCATTGAAGCTTGTGGCAT.........................................................................................................2812.00200020000000000000
...............................................................................................................................................................................................................................................................................................CTGTGCAATGGCATTGAAGCTTGTGGCAT.........................................................................................................2912.00200000000000002000
............................................................................................................................................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTCC................................................................................2512.00200001100000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACAT...................................................................................2312.00210000100000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AA......................................................................................................................................................................................................................................1812.00210100000000000000
.......................................................................................................................................................................................................................................................................ATAATGA--------ACAGGAACTCTGTGCAAT.............................................................................................................................2512.00200110000000000000
.........................................................................................................................................................................................................................................................A----TATCCTAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2712.00202000000000000000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATGGCA.........................................................................................................................2312.00211000000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGA......................................................................................2112.00220000000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCG.......................................................................................2012.00220000000000000000
...........................................................................................................................................................................................................................................................................TGA--------ACAGGAACTCTGTGCAATG............................................................................................................................2212.00200000101000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGG..........................................................................................................................................2012.00220000000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGAACTCTGT..................................................................................................................................2812.00200200000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGA......................................................................................2012.00220000000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGG......................................................................................2012.00220000000000000000
..................................................................................................................................................................................................................................................................CTAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2212.00200200000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACA............................................................................................................................................1812.00210100000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGAC.....................................................................................2212.00220000000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--.................................................................................................................................................................................................................................2112.00210010000000000000
...............................................................................................................................................................................................................................................................ATCCTAGAATAATGA--------ACAGGAACTCTG...................................................................................................................................2712.00200200000000000000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATGGA..........................................................................................................................2211.00101000000000000000
................................................................................................................................................................................................................................................................TCCTAGAATAATGA--------ACAGGAACTCTGTA.................................................................................................................................2811.00100000000000010000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--T................................................................................................................................................................................................................................2211.00101000000000000000
......................................................................................................................................................................................................................................................................................................ATGGCATTGAAGCTTGTG.............................................................................................................1811.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACG....................................................................................2211.00110000000000000000
....................................................................................................................................................................TCGGATGAATGCCC-T---------AACTT--TTGTGAAA.........................................................................................................................................................................................................................2811.00100100000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------A.......................................................................................................................................................................................................................................1711.00100000000001000000
............................................................................................................................................................................................................................................................................GA--------ACAGGAACTCTGTGCAA..............................................................................................................................1911.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGTT.....................................................................................2211.00101000000000000000
.............................................................................................................................................................................................AACTT--TTGTGAAAATGCTTAGAATT.............................................................................................................................................................................................................2511.00100010000000000000
........................................................................................................................................................................................................GAAAATGCTTAGAATTGTTTCC.......................................................................................................................................................................................................2211.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGC........................................................................................1911.00100000100000000000
.........................................................................................................................................................................................................AAAATGCTTAGAATTGTTTCCA----ATT...............................................................................................................................................................................................2511.00100010000000000000
...........................................................................................................................................................................................................................................................................TGA--------ACAGGAACTCTGTGCAATGGCATT.......................................................................................................................2711.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGT......................................................................................2111.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................GGCATTGCATCGTTCTTCC...........................................................................................1911.00100000100000000000
......................................................................................................................................................................................................................................................................AATAATGA--------ACAGGAACTCT....................................................................................................................................1911.00101000000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACG....................................................................................................................................................................................................................................2011.00100100000000000000
.........................................................................................................................................................................................................................................................A----TATCCTAGAATAATGA--------AC.............................................................................................................................................1911.00100100000000000000
.........................................................................................................................................................................................................................................................................AATGA--------ACAGGAACTCTGTGCAAT.............................................................................................................................2311.00100100000000000000
.......................................................................................................................................................................................................................................................................ATAATGA--------ACAGGAACTCTGTGCA...............................................................................................................................2311.00110000000000000000
....................................................................................................................................................................TCGGATGAATGCCC-T---------AACTT--TTGT.............................................................................................................................................................................................................................2411.00100100000000000000
....................................................................................................................................................................................................................................................................................................CAATGGCATTGAAGCTTG...............................................................................................................1811.00100001000000000000
......................................................................................................................................................................................................................................................................................ACAGGAACTCTGTGCAATGGCG.........................................................................................................................2211.00110000000000000000
....................................................................................................................................................................TCGGATGAATGCCC-T---------AACTT--TTGTG............................................................................................................................................................................................................................2511.00101000000000000000
............................................................................................................................................................................................................................................................................GA--------ACAGGAACTCTGTGCAATGG...........................................................................................................................2211.00100010000000000000
...................................................................................................................................................................................................................................................................TAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2111.00100100000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AACTT--TTGTGG...........................................................................................................................................................................................................................2711.00101000000000000000
....................................................................................................................................................................................................................................................................................................CAATGGCATTGAAGCTTGTGGCAT.........................................................................................................2411.00101000000000000000
................................................................................................................................................................................................................................................................TCCTAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2411.00101000000000000000
...................................................................................................................................................................TTCGGATGAATGCCC-T---------AAAA....................................................................................................................................................................................................................................2011.00101000000000000000
....................................................................................................................................................................TCGGATGAATGCCC-T---------AACTT--TTG..............................................................................................................................................................................................................................2311.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACATT..................................................................................2411.00100000000001000000
..............................................................................................................................................................................................................................................................TATCCTAGAATAATGA--------ACAGGG.........................................................................................................................................2211.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGC......................................................................................2111.00110000000000000000
......................................................................................................................................................................................................................................................................AATAATGA--------ACAGGAACTCTGTGCA...............................................................................................................................2411.00101000000000000000
...........................................................................................................................................................................................................................................................................TGA--------ACAGGAACTCTGTGCAATGGCA.........................................................................................................................2511.00101000000000000000
..............................................................................................................................................................................................................................................................TATCCTAGAATAATGA--------ACAGGAACC......................................................................................................................................2511.00101000000000000000
.................................................................................................................................................................................................................................................................................................................GCTTGTGGCATTGCATCGTTCTTCCTGCG.......................................................................................2911.00101000000000000000
........................................................................................................................................................................................................................................................AA----TATCCTAGAATAATGA--------ACAGGA.........................................................................................................................................2411.00110000000000000000
....................................................................................................................................................................................................................................................................................................CAATGGCATTGAAGCTTGT..............................................................................................................1911.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACATTC.................................................................................2611.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................GTTCTTCCTGCGACATTCCTA-AAC..........................................................................2411.00100100000000000000
................................................................................................................................................................................................................................................................TCCTAGAATAATGA--------ACAGGA.........................................................................................................................................2011.00110000000000000000
....................................................................................................................................................................TCGGATGAATGCCC-T---------AACT....................................................................................................................................................................................................................................1911.00101000000000000000
............................................................................................................................................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACA....................................................................................2111.00100001000000000000
....................................................................................................................................................................TCGGATGAATGCCC-T---------AACTT--.................................................................................................................................................................................................................................2011.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACATTC.................................................................................2511.00110000000000000000
.....................................................................................................................................................................................................................................................................GAATAATGA--------ACAGGAACTCTGT..................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................ATCGTTCTTCCTGCGACATTC.................................................................................2111.00100010000000000000
...........................................................................................................................................................................................................................................................................TGA--------ACAGGAACTCTGTGCAATGG...........................................................................................................................2311.00100000001000000000
......................................................................................................................................................................................................................................................................................ACAGGAACTCTGTGCAATGGCA.........................................................................................................................2211.00110000000000000000
.....................................................................................................................................................................................................................................................................................................AATGGCATTGAAGCTTGTGGCA..........................................................................................................2211.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................CATCGTTCTTCCTGCG.......................................................................................1611.00100000000001000000
......................................................................................................................................................................................................................................................................................ACAGGAACTCTGTGCAATGGC..........................................................................................................................2111.00100100000000000000
.......................................................................................................................................................................................................................................................................................CAGGAACTCTGTGCAATGGCATTGAAAA..................................................................................................................2811.00100000000000010000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGC................................................................................................................................1620.50100000010000000000
..........................................................................................................................................................................................................................................................................................................................................TGCGACATTCCTA-AA...........................................................................1530.33100000000001000000
dm3
AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGT----AA----TGAA-G-----------AGTTTAGACA-------------------------------------------------------GAGACTG-TTCGGATATATGCCT-T---------AACTT--TTGTGAAAATTCTGAGAATTGTTTCCA----ATTCACAA-TA------TGGCAA----TATCCTAGAATAATGA--------ACAGGAACTCTGTGCAATGGCATTGGAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTCCTA-AACT--ATTTGAT-T----CT--------------------------------------------------ATTATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................TTCGGATATATGCCT-T---------AACT....................................................................................................................................................................................................................................201213.002130000000000000000010000010000000100000000000100001000000000000000000000000000000000000000000000000100000003100000000000000000000301401721334011321160000000000000000000000000001000000010100000000000000000000000000000000000001000130301010100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................TTCGGATATATGCCT-T---------AAC.....................................................................................................................................................................................................................................191163.00163000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000130000000000000000000050026193234001301900000000000000000000000000010000010000030000000010000000000000000000000000001000020104000000000000000000000010000000000000000000000000000000000000100000000000010000000000000000000000001000
...................................................................................................................................................................TTCGGATATATGCCT-T---------AACTT--.................................................................................................................................................................................................................................211101.0010100000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000010000000001001811994183810000000000000000000000000000000000000000000000000000000000000000000000000000000012010003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GACCGG----AA----TGTA-G-----------GATATAGATT--------AAG--------------------------------ATATATCTATGAGAGATTG-TTTGGATATATGCCT-T---------AATTT--TTGTGAAAATGCTGAAAATTGTATCAA----GTTCACAT-TA------CGGCAA----TATCCCAGAATAATGA--------ACAGGAACTCTGTGCAATGACATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTC-TA-AACT--ATTTGAT-TAGTTAA-TCT----------------------------------------------CTCATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTC-................................................................................24117.001700000215
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACA....................................................................................23113.00131100740
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAACT......................................................................................................................................24111.00117202000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAACTC.....................................................................................................................................25110.001010000000
...................................................................................................................................................................TTTGGATATATGCCT-T---------AATTT--TTGTGA...........................................................................................................................................................................................................................2716.0062000220
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAAC.......................................................................................................................................2315.0054100000
...................................................................................................................................................................TTTGGATATATGCCT-T---------AATTT--TTGTG............................................................................................................................................................................................................................2614.0043000010
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAA........................................................................................................................................2213.0031001010
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGA.........................................................................................................................................2113.0030201000
................................................................................................................................................................................................................................................................TCCCAGAATAATGA--------ACAGGAACT......................................................................................................................................2313.0033000000
...................................................................................................................................................................TTTGGATATATGCCT-T---------AATTT--TTGTGAAA.........................................................................................................................................................................................................................2913.0031000200
................................................................................................................................................................................................................................................................................................TGTGCAATGACATTGAAGCTTGTGGCAT.........................................................................................................2813.0033000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACA....................................................................................2212.0020000110
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACATTC-................................................................................2612.0020000020
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATGA...........................................................................................................................2112.0022000000
...............................................................................................................................................................................................................................................................................................CTGTGCAATGACATTGAAGCTTGTGGCAT.........................................................................................................2912.0021100000
...................................................................................................................................................................TTTGGATATATGCCT-T---------AAT.....................................................................................................................................................................................................................................1912.0020000110
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGA......................................................................................2112.0020010100
...................................................................................................................................................................TTTGGATATATGCCT-T---------AATTT--TTGT.............................................................................................................................................................................................................................2512.0020000020
...........................................................................................................................................................................................................................................................................TGA--------ACAGGAACTCTGTGCAAT.............................................................................................................................2111.0011000000
............................................................................................................................................................................................................ATGCTGAAAATTGTATCAA----GTT...............................................................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................................................................................................CATTGAAGCTTGTGGCATTGC......................................................................................................2111.0010100000
................................................................................................................................................................................................................................................................................................................................TCGTTCTTCCTGCGACATT..................................................................................1911.0010000010
...................................................................................................................................................................................................................................................................................................................TTGTGGCATTGCATCGTTCTTCCTGCGAC.....................................................................................2911.0011000000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAACTCT....................................................................................................................................2611.0010100000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACATTC-................................................................................2511.0011000000
.........................................................................................................................................................................................................................................................................................................ACATTGAAGCTTGTGGCAT.........................................................................................................1911.0010001000
..........................................................................................................................................................................................................................ATCAA----GTTCACAT-TA------CGGCAA----TATCCCA................................................................................................................................................................2811.0010000010
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGAC.....................................................................................2111.0011000000
....................................................................................................................................................................TTGGATATATGCCT-T---------AATTT--TTGT.............................................................................................................................................................................................................................2411.0010000010
................................................................................................................................................................................................................................................................TCCCAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2411.0011000000
..........................................................................................................................................................................................................................ATCAA----GTTCACAT-TA------CGGCAA----TATC...................................................................................................................................................................2511.0010000100
....................................................................................................................................................................................................................AATTGTATCAA----GTTCACAT-TA------CGGC.............................................................................................................................................................................2511.0010001000
......................................................................................................................................................................................................................TTGTATCAA----GTTCACAT-TA------CGGC.............................................................................................................................................................................2311.0011000000
.......................................................................................................................................................................................................................................ACAT-TA------CGGCAA----TATCCCAGAA.............................................................................................................................................................2211.0010000010
................................................................................................................................................................................CT-T---------AATTT--TTGTGAAAATGCTGAAA................................................................................................................................................................................................................2511.0011000000
...........................................................................................................................................................................................................................................................................................................ATTGAAGCTTGTGGCATTGC......................................................................................................2011.0010000010
........................................................................................................................................................................................................................................................................................AGGAACTCTGTGCAATGA...........................................................................................................................1811.0010000100
................................................................................................................................................................................................................................................................................................TGTGCAATGACATTGAAGCTTGTGGC...........................................................................................................2611.0010100000
............................................................................................................................................................................................................................................TA------CGGCAA----TATCCCAGAA.............................................................................................................................................................1811.0010100000
......................................................................................................................................................................................................................................CACAT-TA------CGGCAA----TATCCCAG...............................................................................................................................................................2111.0010001000
................................................................................................................................................................................................................................................................TCCCAGAATAATGA--------ACAGGAA........................................................................................................................................2111.0011000000
...................GCACCTCCAGCGATCGCCT...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000
.............................................................................................................................................................................................................................................................................A--------ACAGGAACTCTGTGCAATG............................................................................................................................2011.0010000010
.......................................................................................................................................................................................................................................................................................................TGACATTGAAGCTTGTGGC...........................................................................................................1911.0010000010
..................................................................................................................................................................................................................................................................................................................CTTGTGGCATTGCATCGTTC...............................................................................................2011.0010001000
...........................................................................................................................................................................................................AATGCTGAAAATTGTATCAA----GT................................................................................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................GCTGAAAATTGTATCAA----GTT...............................................................................................................................................................................................2011.0010000010
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAC........................................................................................................................................2211.0010001000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGA......................................................................................2011.0010000100
.......................................................................................................................................................................................................................................ACAT-TA------CGGCAA----TATCCCAGAAT............................................................................................................................................................2311.0010000010
..........................................................................................................................................................................................................................................................................ATGA--------ACAGGAACTCTGTGCA...............................................................................................................................2011.0010100000
........................................................................................................................................................................................................................................................................TAATGA--------ACAGGAACTCTGTGCA...............................................................................................................................2211.0010100000
..................................................................................................................................................................................................................................................................................................................CTTGTGGCATTGCATCGTTCTTC............................................................................................2311.0010010000
............................................................................................................................................................................................................................................................................................................TTGAAGCTTGTGGCATTGCATCG..................................................................................................2311.0011000000
......................................................................................................................................................................................................................................................................................................ATGACATTGAAGCTTGTGGCAT.........................................................................................................2211.0010100000
.................................................................................................................................................................................................T--TTGTGAAAATGCTGAAAATTGTATCAA----..................................................................................................................................................................................................2811.0010000010
................................................................................................................................................................................................................................................................................................................AGCTTGTGGCATTGCATCGTTCT..............................................................................................2311.0010000100
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACAT...................................................................................2411.0010000010
...........................................................................................................................................................................TATGCCT-T---------AATTT--TTGTGAAA.........................................................................................................................................................................................................................2111.0010001000
.............................................................................................................................................................................................................................................................................................................................GCATCGTTCTTCCTGCGACATTC-................................................................................2311.0010000010
................................................................................................................................................................................................................................................................TCCCAGAATAATGA--------ACAGGAAC.......................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................................................................................................CATTGAAGCTTGTGGCAT.........................................................................................................1811.0011000000
..........................................................................................................................................................................................................................................................................ATGA--------ACAGGAACTCTGTGCAATGA...........................................................................................................................2411.0010001000
.........................................................................................................................................................................................................................................................................AATGA--------ACAGGAACTCTGTGCA...............................................................................................................................2111.0010000100
.....GTTTGTGCAGCCCTGCACCTCCAGCG......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
.......................CTCCAGCGATCGCCTCTTTGGACGCAGC..................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
..................................................................................................................................................................................................................................................................................................................................GTTCTTCCTGCGACATTC-................................................................................1811.0010000010
.........................................................................................................................................................................................................................................AT-TA------CGGCAA----TATCCCAGA..............................................................................................................................................................1911.0010100000
...................................................................................................................................................................TTTGGATATATGCCT-T---------AATTT--TTG..............................................................................................................................................................................................................................2411.0010000010
............................................................................................................................................................................................................................................................................GA--------ACAGGAACTCTGTGCAATG............................................................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGG..........................................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGAC.....................................................................................2211.0010000010
..........................................................................................................................................................................ATATGCCT-T---------AATTT--TTGTGAAAATGC.....................................................................................................................................................................................................................2611.0010001000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACATT..................................................................................2511.0010000010
droYak3
AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGCCTCTTTGGACGCAGGTATGT-GCCTGGATGTGC----AACA-G------------ATTCG----GTATAC-----------ATAT-A------------------------------CAGAGACTG-TTCGGATATATGCGT-T---------ATCTT--TTGTGAAAAAGCTGAAAATTTTATCAA----ATTCACAA-TA------CGGCAA----TATCCCAGAATAATGA--------ACAGGAACTCTGTGCAATGACATTGAAGCTTGTGGCATTGCATCGTTCTTCCTGCGACATTTCTC-ATCT--ATTTGAT-T----CT--------------------------------------------------CTCATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATC.....................................................................................................................................................................................................................................1929.5019170200000000
....GGTTTGTGCAGCCCTGCACCTCCAGCGATC...................................................................................................................................................................................................................................................................................................................................................................................................3024.00800000000008
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATA.....................................................................................................................................................................................................................................1922.50550000000000
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATCT....................................................................................................................................................................................................................................2022.50500000050000
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATCTT--TTGTG............................................................................................................................................................................................................................2622.00400000040000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACA....................................................................................2321.50330000000000
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATCTT--TTGT.............................................................................................................................................................................................................................2521.50300000030000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGA.........................................................................................................................................2121.50310200000000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAA........................................................................................................................................2221.50321000000000
................................................................................................................................................................................GT-T---------ATCTT--TTGTGAAAAAGCTGA..................................................................................................................................................................................................................2321.50300000120000
....................................................................................................................................................................TCGGATATATGCGT-T---------ATCTT--TTGTG............................................................................................................................................................................................................................2521.50303000000000
........................................................................................................................................................................................................................................................AA----TATCCCAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2821.50330000000000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAACT......................................................................................................................................2421.50311100000000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAAC.......................................................................................................................................2321.50301200000000
................................................................................................................................................................................................................................................................................................TGTGCAATGACATTGAAGCTTGTGGCAT.........................................................................................................2821.00201100000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACG....................................................................................2321.00220000000000
............................................................................................................................................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTT.................................................................................2421.00201100000000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAACTC.....................................................................................................................................2521.00210100000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACT....................................................................................2221.00220000000000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGAACC......................................................................................................................................2421.00200200000000
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATCTT--TTGTGA...........................................................................................................................................................................................................................2721.00201000010000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACA....................................................................................2221.00220000000000
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATCTT--TTGTGAAA.........................................................................................................................................................................................................................2920.50110000000000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGA......................................................................................2120.50100001000000
..........................................................................................................................................................................................................AAAAGCTGAAAATTTTATCAA----ATT...............................................................................................................................................................................................2420.50100000010000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGAC.....................................................................................2220.50110000000000
.............................................................................................................................................................................................................................................................................................................................GCATCGTTCTTCCTGCGACATTTC................................................................................2420.50101000000000
..........................................................................................................................................................................ATATGCGT-T---------ATCTT--TTGTGA...........................................................................................................................................................................................................................2020.50100000010000
........................................................................................................................................................................ATATATGCGT-T---------ATCTT--TTGT.............................................................................................................................................................................................................................2020.50100000010000
...........................................................................................................................................................................TATGCGT-T---------ATCTT--TTGTGAAAAAGCTGA..................................................................................................................................................................................................................2820.50100000010000
..........................................................................................................................................................................ATATGCGT-T---------ATCTT--TTGTG............................................................................................................................................................................................................................1920.50100000010000
.......................................................................................................................................................................................................................TTTATCAA----ATTCACAA-TA------CGGCAA----TAT....................................................................................................................................................................2720.50100100000000
............................................................................................................................................................................................................................................................................................................TTGAAGCTTGTGGCATTGC......................................................................................................1920.50100100000000
..........................................................................................................................................................................ATATGCGT-T---------ATCTT--TTGTGAAAA........................................................................................................................................................................................................................2320.50100000010000
..........................................................................................................................................................................ATATGCGT-T---------ATCTT--TTGTGAA..........................................................................................................................................................................................................................2120.50100000010000
........................................................................................................................................................................ATATATGCGT-T---------ATCTT--TTGTGAAAAAGC.....................................................................................................................................................................................................................2820.50100000010000
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATCTT--.................................................................................................................................................................................................................................2120.50100100000000
...............................................................................................................................................................................................................................................................................................CTGTGCAATGACATTGAAGCTTGTGGCAT.........................................................................................................2920.50100100000000
.........................................................................................................................................................................TATATGCGT-T---------ATCTT--TTGTGAAAAA.......................................................................................................................................................................................................................2520.50100000010000
...............................................................................................................................................................................................................................................................ATCCCAGAATAATGA--------ACAGGG.........................................................................................................................................2120.50110000000000
.........................................................................................................................................................................................................................................AA-TA------CGGCAA----TATCCCAGAAT............................................................................................................................................................2120.50100100000000
.........................................................................................................................................................................TATATGCGT-T---------ATCTT--TTGTGAAAAAGC.....................................................................................................................................................................................................................2720.50100000010000
..........................................................................................................................................................................ATATGCGT-T---------ATCTT--TTGTGAAA.........................................................................................................................................................................................................................2220.50100000010000
.........................................................................................................................................................................TATATGCGT-T---------ATCTT--TTGTGAAAA........................................................................................................................................................................................................................2420.50100000010000
.........................................................................................................................................................................TATATGCGT-T---------ATCTT--TTGTG............................................................................................................................................................................................................................2020.50100000010000
.................................................................................................................................................................G-TTCGGATATATGCGT-T---------ATCTT--TTGTGA...........................................................................................................................................................................................................................2820.50100000010000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCGACT....................................................................................2320.50110000000000
..................TGCACCTCCAGCGATCGCCTCTTTG..........................................................................................................................................................................................................................................................................................................................................................................................2520.50100100000000
............................................................................................................................................................................................................................................................................................................................TGCATCGTTCTTCCTGCGACATTTC................................................................................2520.50101000000000
............................................................................................................................................................................ATGCGT-T---------ATCTT--TTGTGAAAAAGC.....................................................................................................................................................................................................................2420.50100000010000
.....................................................................................................................................................................................................................ATTTTATCAA----ATTCACAA-TA------CGGCAA----C......................................................................................................................................................................2720.50100100000000
...........................................................................................................................................................................................................................................................................................................................TTGCATCGTTCTTCCTGCGACATT..................................................................................2420.50100100000000
...................................................................................................................................................................TTCGGATATATGCGT-T---------ATCTT--TTGTGAA..........................................................................................................................................................................................................................2820.50100000010000
...........................................................................................................................................................................TATGCGT-T---------ATCTT--TTGTGAA..........................................................................................................................................................................................................................2020.50100000010000
..........................................................................................................................................................................................................................................................................................................................ATTGCATCGTTCTTCCTGCG.......................................................................................2020.50100000100000
...................................................................................................................................................................................................................AAATTTTATCAA----ATTCACAA-TA------CGGCAA----T......................................................................................................................................................................2920.50101000000000
........................................................................................................................................................................................................................TTATCAA----ATTCACAA-TA------CGGCAA----T......................................................................................................................................................................2420.50101000000000
droEug1
AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGCAGGTTTGT-TATTTG----AA----ATTA----G-----AAC-A------------TCTA------------TAATCTA--------------------------------TCT-ATAGGATAAAGGTGT-C---------GATTC--ATGTGAAAATGCTGATAGTTAAATCCA----ATTCACAC-TA------TGGCCT----TATCCTAGAATAATGA--------ACAGGAACTCTGTGCAATGGCATCGAAGCCTGTGGCATTGCATCGTTCTTCCTGCAACATCAATA-AACC--ATTTAGT-T----AG-GTT------TCCAAAGTATGAAATTGTCAGTAAAATGTT----------GTTAT-SizeHit CountTotal NormTotal
No Reads
droBia1
AAATGGTTCGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGAAGGTATGT-GACTT-----AC----TACA-T------------GTTTG----GGAAAC-----------GAAT-A----------------------------------ACCCC-TTAGGATAAAGGCCA-A---------ACATT--TTGTGAAAATGATGAAAA--GCTTCCC----ATTCGCAA-AT------AGGCCA----TATCCTAGAGCAATGAT-T-----TCAGGAACTCTGTGCAATGGCATTGAAGCTTGTGACGTTGCATCGTTCTTCCTGCGACATTTATA-AACA--AGTGCTT-T----AT--------------------------------------------------TTTCGASizeHit CountTotal NormTotal
No Reads
droTak1
AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGCAGGTATGT-GATTTA----AG----TAAA-G---------------------GGAAAC-----------TA--------------------------------------ACTCA-TTCGGATATGAACCT-T---------AACTG--ATGTGAAAATGCTGAGAATACCGTCCA----ATTCGCACATA------CGGTCA----CATCCTAGAATAAATAA-C-----TCAGGAACTCTGTGCAATGGCATTGAAGCTTGTGACATTGCATCGTTCTTCCTGCGACATTTACA-AAAT--AT---------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAATGGTTTGTGCAGCCCTGCACTTCCAGCGATCGTCTCTTTGGCCGAAGGTAATGTTG-------------------------------CGTTTAAATAGGAAAT-----------TAAT-TGCT----------------------------------CATTCCGGATAAACCCCT-T---------AATTT--ATGCGAAATTGCTGAACATTTCTTCCA----ATTCGCAA-TT------TGGTAA----CATCCCAGAACAAAGA--------ACAGGAACTCTGTGCAATGGCATTAAAGCTTGTGACATTGCATCGTTCTTCCTGCGACATTTATA-AATT--A----------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAATGGTTCGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGAAGGTATGA-TGTGTA----AA----TAAA--GAAATCAGTCA-A------------TCTA------------T-T----------------------------------ACCCT-ATTGGATAAAATACT-T---------AATTT--ATGCGAACATGCTGAAAATCACATCCA----ATTCGCAC-TA------AGACCA----TATCCTATAATAAAGA--------ACAGGAACTCTGTGCAATGGCATTGAAGCTTGTGACATTGCATCGTTCTTCCTGCGACATTTTCA-AAAAGCCTTTGCC-T----TA--------------------------------------------------CTTATASizeHit CountTotal NormTotal
No Reads
droFic1
AAATGGTTTGTGCAGCCCTGCACCTCCAGCGATCGTCTCTTTGGACGGAGGTAAAT-AAATA-----A-ATA----TT-CAA-----AAT-G------------TTTA------------CAATCGA---------------------------------AG-TTTGGATAAAGGCCT-C---------AAATTGAATGTGAAAATGCTGAAAACTTCGTCCA----ATTCGCAA-AA------TGGCCA---CAATCCTAGATTAAAGA--------TCAGGAACTCTGTGTAAGGACATTGAAGCTTGTGACCTTGCATCGTTCTTCCTGCGACATTTTAA-AGAT--CT-TTCT-T----AA-CTTCTGATAGCCGAAAAATAATACTGCTT-----ATGTAGTTTGCTTCCTACATTSizeHit CountTotal NormTotal
No Reads
droKik1
AAATGGTTCGTGCAGCCTTGCACCTCTAGCGATCGACTTTTTGGACGCAGGTGAGA-ACGCC--------TT----TT-CGA-------------------AACCC------------CATTCTCT---------------------------------CTT-TTCGGATATTGGTCC-C---------TCAAC--ATGCAATAATGCTGAGAATGTTTTCCG----ACTTGCAT-AG------CGACCACAAATATCCTAGAATAAAGG--------TCAGGAACTCTGTGCAATGACATTGAAGCTTGTGACATTGCATCGTTCTTCCTGCGACACT----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AAATGGTTCGTGCAGCCCTGCACTTCCAGCGATCGTCTTTTCGGAAGAAGGTGCGT-TTTTT-------T-TCGCCA-A-----------A--------AGGAT---------------------------------------------------------ATTAGGGATTAAGGTCC-T---------TGATT--ATGG-AAAGAGTGAAGAACAATCTACT----CTTTCCAT-TT------CGACCT----GATCCTAGATCAAAAA--------TCAGGAACTCTGTGTGGTGGCATTCAAGATTGTGGCACTTCATCGTTCTTCCTGAGACAGTTTTTTGACA-AATCTGAAAT----ATTTCC----------------------------------------------ATTAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGATT--ATGG-A...........................................................................................................................................................................................................................26125.00254231150
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGATT--ATGG-AAA.........................................................................................................................................................................................................................2819.009000090
...............................................................................................................................................................................................................................................................................................................................ATCGTTCTTCCTGAGACAGTT.................................................................................2118.008200015
........................................................................................................................................................................................................................................................................................................................GCACTTCATCGTTCTTCCTGAGACAGTT.................................................................................2817.007000007
..................................................................................................................................................................................................................................................................................................................................GTTCTTCCTGAGACAGTTT................................................................................1915.005100004
...........................................................................................................................................................................................................................................................................................................................CTTCATCGTTCTTCCTGAGACAGTT.................................................................................2515.005410000
.............................................................................................................................................................................................................AGTGAAGAACAATCTACT----CT................................................................................................................................................................................................2014.004021010
.............................................................................................................................................................................................................................................................................................................................TCATCGTTCTTCCTGAGACAGTT.................................................................................2313.003000012
........................................................................................................................................................................................................................................................................................................................GCACTTCATCGTTCTTCCTGAGACAG...................................................................................2613.003000003
..........................................................................................................................................................................................................................................................................................................................ACTTCATCGTTCTTCCTGAGACAGTT.................................................................................2613.003000021
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGATT--ATGG-AA..........................................................................................................................................................................................................................2713.003001002
..............................................................................................................................................................................................................................................................................................................................CATCGTTCTTCCTGAGACAGTT.................................................................................2213.003000102
...............................................................................................................................................................................................................................................................ATCCTAGATCAAAAA--------TCAGGAACT......................................................................................................................................2413.003030000
..............................................................................................................................................................................................GATT--ATGG-AAAGAGTGAAG.................................................................................................................................................................................................................1912.002000011
.........................................................................................................................................................................TTAAGGTCC-T---------TGATT--ATGG-AAAGA.......................................................................................................................................................................................................................2412.002000011
.............................................................................................................................................................................GGTCC-T---------TGATT--ATGG-AAAGA.......................................................................................................................................................................................................................2012.002000011
...............................................................................................................................................................................................................................................................................................................AAGATTGTGGCACTTCATCGTTCTT.............................................................................................2512.002000002
........................................................................................................................................................................................................................................................................CAAAAA--------TCAGGAACTCTGTGTGGT.............................................................................................................................2412.002002000
............................................................................................................................................................................................................................................................................................................................TTCATCGTTCTTCCTGAGACAGTT.................................................................................2412.002000002
...............................................................................................................................................................................................................................................................................................CTGTGTGGTGGCATTCAAGATTGT..............................................................................................................2412.002000011
..............................................................................................................................................................................................................................................................GATCCTAGATCAAAAA--------TCAGGAACT......................................................................................................................................2512.002020000
................................................................................................................................................................................CC-T---------TGATT--ATGG-AAAGAGTGAAGAACA.............................................................................................................................................................................................................2712.002000020
................................................................................................................................................................................CC-T---------TGATT--ATGG-AAAGAGTGAA..................................................................................................................................................................................................................2212.002200000
......................................................................................................................................................................................................................................................................................TCAGGAACTCTGTGTGGTGG...........................................................................................................................2012.002000011
................................................................................................................................................................................CC-T---------TGATT--ATGG-AAAGAGTGAAGA................................................................................................................................................................................................................2411.001000001
........................................................................................................................................................................ATTAAGGTCC-T---------TGATT--ATGG-AAAGAGT.....................................................................................................................................................................................................................2711.001000010
..........................................................................................................................................................................................................................................T-TT------CGACCT----GATCCTAGATC............................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................CAAAAA--------TCAGGAACTCTGTGTGGTGGC..........................................................................................................................2711.001100000
..............................................................................................................................................................................GTCC-T---------TGATT--ATGG-AAAGAGTGAAGAAC..............................................................................................................................................................................................................2811.001010000
...............................................................................................................................................................................................................................................................ATCCTAGATCAAAAA--------TCAGGAACC......................................................................................................................................2411.001010000
.........................................................................................................................................................................................................................................................................AAAAA--------TCAGGAACTCTGTGTGG..............................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................CTGTGTGGTGGCATTCAAG...................................................................................................................1911.001001000
..........................................................................................................................................................................................................................................................................AAAA--------TCAGGAACTCTGTGTGG..............................................................................................................................2111.001010000
..............................................................................................................................................................................................GATT--ATGG-AAAGAGTGAAGA................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................TTCAAGATTGTGGCACTTCA.....................................................................................................2011.001001000
............................................................................................................................................................................................................................................................................AA--------TCAGGAACTCTGTGTGGTGGC..........................................................................................................................2311.001100000
...............................................................................................................................................................................................ATT--ATGG-AAAGAGTGAAGAAA..............................................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................GGTCC-T---------TGATT--ATGG-AAAGAGT.....................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................CAAAAA--------TCAGGAACTCTGTGTGG..............................................................................................................................2311.001100000
...........................................................................................................................................................................................................................................................................................................ATTCAAGATTGTGGCACTTC......................................................................................................2011.001010000
...................................................................................................................................................................................................................................................................................................GTGGTGGCATTCAAGATTGTGGCA..........................................................................................................2411.001001000
............................................................................................................................................................................................................................................................................................................TTCAAGATTGTGGCACTTC......................................................................................................1911.001010000
.......................................................................................................................................................................................................G-AAAGAGTGAAGAACAATCTACT----..................................................................................................................................................................................................2311.001010000
..........................................................................................................................................................................................................................................................................AAAA--------TCAGGAACTCTGTGTGGTGGC..........................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................ACTTCATCGTTCTTCCTGAGACA....................................................................................2311.001000001
.................................................................................................................................................................................C-T---------TGATT--ATGG-AAAGAGTG....................................................................................................................................................................................................................1911.001000001
.......................................................................................................................................................................................................................................................................................CAGGAACTCTGTGTGGTGGC..........................................................................................................................2011.001001000
....................................................................................................................................................................................................................................................................AGATCAAAAA--------TCAGGAACC......................................................................................................................................1911.001010000
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGATT--ATGG-AAAGA.......................................................................................................................................................................................................................3011.001000010
.............................................................................................................................................................................................................................................................................A--------TCAGGAACTCTGTGTGGTGG...........................................................................................................................2111.001000001
..........................................................................................................................................................................................................................CTACT----CTTTCCAT-TT------CGACCT----G......................................................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................................................AA--------TCAGGAACTCTGTGTGGTGG...........................................................................................................................2211.001001000
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGAT....................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................GATCAAAAA--------TCAGGAACTCTGTGTGGT.............................................................................................................................2711.001000001
............................GCGATCGTCTTTTCGGAAGAAG...................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................................................................................ATTCAAGATTGTGGCACTTCATCG..................................................................................................2411.001001000
.....................................................................................................................................................................................................................................TTCCAT-TT------CGACCT----GATCCTAGATC............................................................................................................................................................2511.001010000
.............................................................................................................................................................................GGTCC-T---------TGATT--ATGG-AAAG........................................................................................................................................................................................................................1911.001000010
....................................................................................................................................................................................................ATGG-AAAGAGTGAAGAACAATCTACT----..................................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................GTTCTTCCTGAGACAGTT.................................................................................1811.001000001
.......................................................................................................................................................................GATTAAGGTCC-T---------TGATT--ATGG-AAA.........................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................................................................................................................................ATCCTAGATCAAAAA--------TCAGGAACTCTGT..................................................................................................................................2811.001010000
.............................................................................................................................................................................................................AGTGAAGAACAATCTACT----CTT...............................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................TTAAGGTCC-T---------TGATT--ATGG-AAAGAGT.....................................................................................................................................................................................................................2611.001000010
...............................................................................................................................................................................................................................................................................................CTGTGTGGTGGCATTCAAGATTGTGGCA..........................................................................................................2811.001010000
................................................................................................................................................................................CC-T---------TGATT--ATGG-AAAGAGTGAAGAAC..............................................................................................................................................................................................................2611.001010000
......................................................................................................................................................................................................................................TCCAT-TT------CGACCT----GATCCTAGATC............................................................................................................................................................2411.001010000
...............................................................................................................................................................................................................................................................................................................AAGATTGTGGCACTTCATCGTTCTTCC...........................................................................................2711.001010000
..............................................................................................................................................................................................................GTGAAGAACAATCTACT----CTTTC.............................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................A--------TCAGGAACTCTGTGTGGTGGCATTC......................................................................................................................2611.001010000
................................................................................................................................................................................................................................................................................................TGTGTGGTGGCATTCAAGATTGTGGCAC.........................................................................................................2811.001010000
...........................................................................................................................................................................................................................................................................................................ATTCAAGATTGTGGCACTTCATCGTTCT..............................................................................................2811.001100000
...........................................................................................................................................................................................................................TACT----CTTTCCAT-TT------CGACCT----G......................................................................................................................................................................2111.001000001
..............................................................................................................................................................................................................GTGAAGAACAATCTACT----CTTTCC............................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................GTGAAGAACAATCTACT----CTT...............................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................................................................................................................TGTGTGGTGGCATTCAAGATTGTGGCA..........................................................................................................2711.001000001
...............................................................................................................................................................................................................................................................ATCCTAGATCAAAAA--------TCAGGAACTCC....................................................................................................................................2611.001010000
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGA.....................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGAA....................................................................................................................................................................................................................................2011.001000100
.............................................................................................................................................................................................................AGTGAAGAACAATCTACT----CTTTC.............................................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................ATCGTTCTTCCTGAGACAGTTT................................................................................2211.001000010
.........................................................................................................................................................................................................................................AT-TT------CGACCT----GATCCTAGATC............................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................AAAA--------TCAGGAACTCTGTGTGGT.............................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................TGTGGCACTTCATCGTTCTT.............................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................TCCTGAGACAGTTTTTTGA...........................................................................1911.001000001
...........................................................................................................................................................................................................AGAGTGAAGAACAATCTACT----..................................................................................................................................................................................................2011.001000001
...........................................................................................................................................................................................................................................................................................................................CTTCATCGTTCTTCCTGAGACAGTTT................................................................................2611.001010000
...............................................................................................................................................................................................................................................................ATCCTAGATCAAAAA--------TCAGGAACTC.....................................................................................................................................2511.001100000
................................................................................................................................................................................................................................................................................................TGTGTGGTGGCATTCAAGATT................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................GGCACTTCATCGTTCTTCCTGAGACA....................................................................................2611.001000001
....................................................................................................................................................................AGGGATTAAGGTCC-T---------TGATT--ATGG-A...........................................................................................................................................................................................................................2511.001010000
..............................................................................................................................................................................................................................................................................................................................CATCGTTCTTCCTGAGACAGA..................................................................................2111.001100000
....................................................................................................................................................................................................................................................................AGATCAAAAA--------TCAGGAACTCTGTGTGGT.............................................................................................................................2811.001000010
............................................................................................................................................................................AGGTCC-T---------TGATT--ATGG-AAAGA.......................................................................................................................................................................................................................2111.001000010
................................................................................................................................................................................................................................................................................................................................TCGTTCTTCCTGAGACAGTT.................................................................................2011.001000001
................................................................................................................................................................................CC-T---------TGATT--ATGG-AAAGAGTGA...................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................AGTGAAGAACAATCTACT----CC................................................................................................................................................................................................2011.001010000
...................................................................................................................................................................TAGGGATTAAGGTCC-T---------TGATT--ATGG-AAAG........................................................................................................................................................................................................................2911.001000010
......................................................................................................................................................................................................................................................................................................................TGGCACTTCATCGTTCTTCCTGAGACA....................................................................................2711.001000001
droBip1
AAGTGGTTTGTGCAGCCCTGCACTTCCAGCGATCGTCTTTTTGGAAGAAGGTGGGT-CTCTT-------T-TGGA-------------GA-T-A--------------------------------------------------------------TGACTT-CAAGGATAAAGGTCC-T---------TAAGT--ATGCAT-TGAGCTAAAAACACTCTACT----CCTTGCAT-TT------AGACCT----TGTCCTAGACCAAAAA--------TCAGAAACTCTGTGTAGTGGCATTGAAGCTAGTGACGCTA-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AAATGGTTCGTGCAGCCCTGCACGTCGAGCGATCGTCTCTTTGGACGCAGGTGAGT-GCCGTC----G-TTC----CT-CTG------------------AGGACT-----------TC-TCCTCCC---------------------------------AT-TGTGGATGCAGGGA--C---------AAACG--ATGTGGCAACGCTGACAGCT-TGGCCG----TTTCACAT-TC------CCCCCC--GTCATCCTAGAGCAAGGAC-C-----TCAGGAACTCTGTGCAGTGGCATCCCAGTCTGTGGCACTGCATCGTTCTTCCTGCTACATTC---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAACG--ATGT.............................................................................................................................................................................................................................2419.0090800001000
...............................................................................................................................................................................................................................................................ATCCTAGAGCAAGGAC-C-----TCAGGAACT......................................................................................................................................2615.0050320000000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAAC....................................................................................................................................................................................................................................1914.0040201010000
...............................................................................................................................................................................................................................................................ATCCTAGAGCAAGGAC-C-----TCAGGAAC.......................................................................................................................................2513.0030110001000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAACG--.................................................................................................................................................................................................................................2013.0030100101000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAACG--A................................................................................................................................................................................................................................2112.0020100001000
...............................................................................................................................................................................................................................................................ATCCTAGAGCAAGGAC-C-----TCAGGA.........................................................................................................................................2312.0021100000000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAACG--AT...............................................................................................................................................................................................................................2212.0020100001000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAA.....................................................................................................................................................................................................................................1812.0020100010000
......................................................................................................................................................................................................................................................................................................................TGGCACTGCATCGTTCTTCCTGCT.......................................................................................2412.0020200000000
...................................................................................................................................................................................C---------AAACG--ATGTGGCAACGCTGACA................................................................................................................................................................................................................2311.0010010000000
......................................................................................................................................................................................................................................................................................TCAGGAACTCTGTGCAGTGG...........................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................TCCTAGAGCAAGGAC-C-----TCAGGAACT......................................................................................................................................2511.0010100000000
...............................................................................................................................................................................................................................................................ATCCTAGAGCAAGGAC-C-----TCAG...........................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................GTGGCAACGCTGACAGCT-TGGC........................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................ACTGCATCGTTCTTCCTGCTACATTC---------------------------------------------------------------------------------2611.0011000000000
...........GCAGCCCTGCACGTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................................C-C-----TCAGGAACTCTGTGCAGTG............................................................................................................................2111.0010000100000
....................................................................................................................................................................GTGGATGCAGGGA--C---------AAACG--ATGTGGC..........................................................................................................................................................................................................................2611.0010000001000
.....GTTCGTGCAGCCCTGCACGTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................................................................................................................................................................................................................................C-----TCAGGAACTCTGTGCAGTGG...........................................................................................................................2111.0010000000001
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAACG--ATGTGG...........................................................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................AGGGA--C---------AAACG--ATGTGGC..........................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................................................................................................................................................................ATCCTAGAGCAAGGAC-C-----TCAGGAA........................................................................................................................................2411.0010000100000
...........................................................................................................................................................................................................................................................................................................ATCCCAGTCTGTGGCACTGC......................................................................................................2011.0010100000000
...........................................................................................................................................................................CAGGGA--C---------AAACG--ATGTGGCAACGC.....................................................................................................................................................................................................................2411.0010010000000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAACG--ATG..............................................................................................................................................................................................................................2311.0010100000000
...............................................................................................................................................................................................................................................................ATCCTAGAGCAAGGAC-C-----TCAGG..........................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................................................................................................................GTGGCATCCCAGTCTGTGGCAC.........................................................................................................2211.0010010000000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------AAACG--ATGTGGC..........................................................................................................................................................................................................................2711.0010000000001
...............................................................................................................................................................................................ACG--ATGTGGCAACGCTGACA................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................GA--C---------AAACG--ATGTGGCAACGCTGACA................................................................................................................................................................................................................2511.0010010000000
................................................................................................................................................................................................................................................................................C-----TCAGGAACTCTGTGCAGT.............................................................................................................................1911.0010000100000
...................................................................................................................................................................TGTGGATGCAGGGA--C---------........................................................................................................................................................................................................................................1520.5010000000010
...................................................................................................................................................................TGTGGATGCAGGGA--C---------T.......................................................................................................................................................................................................................................1640.2510000000001
droWil2
AAATGGTTTGTACAACCTTGCACCTCAAGCGATCGTCTGTTTGGACGTAGGTGAGT-CGTCA-------G-TTAA----GAA--------A-----------------------AGACCAT-TGACC------------------------------ATTGT-GCGTGGGAAGCCAAT-T--------AAACTG--AAATGCAAGTGATGGAAATTGCTACCATTTGTTTGACAT-TG--AAAATGG-------CATCCTAGAGAAAATAATA-----AAAGGAACTCTGTGCGATTGCATTGAAGCTTATGGAATCGCATCGTTCTTCCTGTTACAGATCAA------------------------------------------------------------------------TATACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................CGCATCGTTCTTCCTGTTACAGAT.................................................................................24126.002647195
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--AAATGC...........................................................................................................................................................................................................................26113.001310912
...........................................................................................................................................................................................................................................................................................................................TCGCATCGTTCTTCCTGTTACAGAT.................................................................................25112.001290003
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--AAATGCAA.........................................................................................................................................................................................................................28112.0012001110
..........................................................................................................................................................................................................................................................................................................................ATCGCATCGTTCTTCCTGTTACAGAT.................................................................................26111.001121008
............................................................................................................................................................................................................................................................................................................................CGCATCGTTCTTCCTGTTACAGATC................................................................................2518.00840121
.........................................................................................................................................................................................................................................................................................................................AATCGCATCGTTCTTCCTGTTACAGAT.................................................................................2718.00810007
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACT....................................................................................................................................................................................................................................1917.00700133
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--A................................................................................................................................................................................................................................2115.00501301
...............................................................................................................................................................................................................................................................ATCCTAGAGAAAATAATA-----AAAGGAACTC.....................................................................................................................................2814.00440000
.............................................................................................................................................................................................................................................................................AATA-----AAAGGAACTCTGTGCGATTGC..........................................................................................................................2514.00400310
...............................................................................................................................................................................................................................................................................................................................ATCGTTCTTCCTGTTACAGAT.................................................................................2113.00302001
............................................................................................................................................................................GCCAAT-T--------AAACTG--AAATGCAAGTGAT....................................................................................................................................................................................................................2613.00301110
............................................................................................................................................................................................................................................................................................................TTGAAGCTTATGGAATCGCATCGTTCTT.............................................................................................2812.00200200
...........................................................................................................................................................................................................................................................................................................ATTGAAGCTTATGGAATCGCATCGTTCT..............................................................................................2812.00200200
............................................................................................................................................................................................................................................................................................................TTGAAGCTTATGGAATCGCATCGTT................................................................................................2512.00200200
...........................................................................................................................................................................................................................................................................................................................TCGCATCGTTCTTCCTGTTACAGATC................................................................................2612.00210010
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--.................................................................................................................................................................................................................................2012.00200101
......................................................................................................................................................................TGGGAAGCCAAT-T--------AAACTG--AAATGCAA.........................................................................................................................................................................................................................2712.00202000
.........................................................................................................................................................................................................................................................................AAATAATA-----AAAGGAACTCTGTGCGATT............................................................................................................................2712.00200110
..............................................................................................................................................................................................................................................................................ATA-----AAAGGAACTCTGTGCGATTGC..........................................................................................................................2412.00200200
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--G................................................................................................................................................................................................................................2112.00210010
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--AAA..............................................................................................................................................................................................................................2312.00200110
...........................................................................................................................................................................................................................................................................ATAATA-----AAAGGAACTCTGTGCGA..............................................................................................................................2312.00201010
.......................................................................................................................................................................................................................................................................................AAGGAACTCTGTGCGATTGCAT........................................................................................................................2212.00220000
...............................................................................................................................................................................AAT-T--------AAACTG--AAATGCAAGTGA.....................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................AAT-T--------AAACTG--AAATGCAAGT.......................................................................................................................................................................................................................2011.00100100
........................................................................................................................................................................................................................................................................................................TGCATTGAAGCTTATGGAAT.........................................................................................................2011.00100100
............................................................................................................................................................................................................................................................................................................TTGAAGCTTATGGAATCGC......................................................................................................1911.00100100
.......................................................................................................................................................................................................................................................................................................TTGCATTGAAGCTTATGGAATCGC......................................................................................................2411.00100100
...................................................................................................................................................................................................................AAATTGCTACCATTTGTTTGACAT-T........................................................................................................................................................................................2511.00100010
.................................................................................................................................................................................................................................TGTTTGACAT-TG--AAAATGG-------CAT....................................................................................................................................................................2211.00101000
...........................................................................................................................................................................AGCCAAT-T--------AAACTG--AAATGCAAGTGAT....................................................................................................................................................................................................................2711.00100100
.................................................................................................................................................................................................................................................................................................................................CGTTCTTCCTGTTACAGATC................................................................................2011.00100001
................CTTGCACCTCAAGCGATCGTC................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
................................................................................................................................................................................................................................................................TCCTAGAGAAAATAATA-----AAAGGAAC.......................................................................................................................................2511.00101000
.............................................................................................................................................................................................................................................................................AATA-----AAAGGAACTCTGTGCGATTGCATT.......................................................................................................................2811.00100010
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--AAATG............................................................................................................................................................................................................................2511.00100001
............................................................................................................................................................................................................................................................................................................TTGAAGCTTATGGAATCGCATC...................................................................................................2211.00100100
..........................................................................................................................................................................AAGCCAAT-T--------AAACTG--AAATGCAAGTGAT....................................................................................................................................................................................................................2811.00101000
...................................................................................................................................................................................................................................................................................................................TTATGGAATCGCATCGTTCTT.............................................................................................2111.00100100
......................................................................................................................................................................................................................................................................................AAAGGAACTCTGTGCGATTGCATT.......................................................................................................................2411.00100010
..................................................................................................................................................................................................................................................................................................................CTTATGGAATCGCATCGTTCTT.............................................................................................2211.00100100
...............................................................................................................................................................................................................................................................................................................AAGCTTATGGAATCGCATCGTT................................................................................................2211.00100100
...............................................................................................................................................................................................................................................................................TA-----AAAGGAACTCTGTGCGATTGCATT.......................................................................................................................2611.00100010
................................................................................................................................................................................................................................................................................................................AGCTTATGGAATCGCATCGTT................................................................................................2111.00100010
............................................................................................................................................................................GCCAAT-T--------AAACTG--AAATGCAAGTGATG...................................................................................................................................................................................................................2711.00101000
.................................................................................................................................................................................................................................................................................................GTGCGATTGCATTGAAGCTTATGGAAT.........................................................................................................2711.00100001
...............................................................................................................................................................................................................................................................................TA-----AAAGGAACTCTGTGCGATTGCA.........................................................................................................................2411.00100010
..............................................................................................................................................................................................................................................................................................................GAAGCTTATGGAATCGCATCGTTCTT.............................................................................................2611.00100100
.........................................................................................................................................................................................................................................AT-TG--AAAATGG-------CATCCTAGAGA............................................................................................................................................................2211.00101000
................................................................................................................................................................................................................................................................................A-----AAAGGAACTCTGTGCGA..............................................................................................................................1811.00100010
................................................................................................................................................................................................................................................................................A-----AAAGGAACTCTGTGCGATTG...........................................................................................................................2111.00100010
.............................................................................................................................................................................................................................................................................................................TGAAGCTTATGGAATCGCATC...................................................................................................2111.00101000
.........................................................................................................................................................................................................................................AT-TG--AAAATGG-------CATCCTAGAGAAAA.........................................................................................................................................................2511.00100100
......................................................................................................................................................................................................................................................................................AAAGGAACTCTGTGCGATTGC..........................................................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................ATAATA-----AAAGGAACTCTGTGCGATTG...........................................................................................................................2611.00100100
.................................................................................................................................................................................................................................................................CCTAGAGAAAATAATA-----AAA............................................................................................................................................1911.00100010
..............ACCTTGCACCTCAAGCGATCGTCTG..............................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..................................................................................................................................................................................................................................................AATGG-------CATCCTAGAGAAAAT........................................................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................ACAT-TG--AAAATGG-------CATCCTA................................................................................................................................................................2011.00101000
................................................................................................................................................................................AT-T--------AAACTG--AAATGCAAGTGATGGA.................................................................................................................................................................................................................2511.00100100
..............................................................................................................................................................................................................................................................CATCCTAGAGAAAATAATA-----AAAGGAACTC.....................................................................................................................................2911.00110000
.............................................................................................................................................................................................................................................................................................................TGAAGCTTATGGAATCGCATCGTTCTTC............................................................................................2811.00100010
......................................................................................................................................................................................................................................................................................AAAGGAACTCTGTGCGATT............................................................................................................................1911.00100100
..............................................................................................................................................................................................................................................................................................................GAAGCTTATGGAATCGCATCGT.................................................................................................2211.00100100
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAAC.....................................................................................................................................................................................................................................1811.00100001
..........................................................................................................................................................................................................................................................................................................................ATCGCATCGTTCTTCCTGTTACAGAA.................................................................................2611.00100001
.............................................................................................................................................................................................................................................................................................................TGAAGCTTATGGAATCGCATCGTTCTT.............................................................................................2711.00100100
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--AAATGCA..........................................................................................................................................................................................................................2711.00100100
..............................................................................................................................................................................................................................................................................ATA-----AAAGGAACTCTGTGCGA..............................................................................................................................2011.00100100
..............................................................................................................................................................................................................................................................................................................................CATCGTTCTTCCTGTTACAGAT.................................................................................2211.00100001
..........................................................................................................................................................................................................................................................................AATAATA-----AAAGGAACTCTGTGCGA..............................................................................................................................2411.00100100
........................................................................................................................................................................................................................................CAT-TG--AAAATGG-------CATCCTAGAGAA...........................................................................................................................................................2411.00101000
................................................................................................................................................................................................................................................................................................................AGCTTATGGAATCGCATCGT.................................................................................................2011.00100100
................................................................................................................................................................................................................................................................................................................AGCTTATGGAATCGCATCGTTC...............................................................................................2211.00100100
.............................................................................................................................................................................................................................................................................................................................GCATCGTTCTTCCTGTTACAGAT.................................................................................2311.00100001
...................................................................................................................................................................................................................................................................................................................TTATGGAATCGCATCGTTCTTC............................................................................................2211.00100100
.............................................................................................................................................................................................................................................................................AATA-----AAAGGAACTCTGTGCGATT............................................................................................................................2311.00100001
.............................................................................................................................................................................................................................................................................AATA-----AAAGGAACTCTGTGCGA..............................................................................................................................2111.00100100
..............ACCTTGCACCTCAAGCGATCGTCTGTTTG..........................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
.............................................................................................................................................................................................................................................................................................................TGAAGCTTATGGAATCGCATCGTT................................................................................................2411.00100010
................................................................................................................................................................................................................................................................................................................................TCGTTCTTCCTGTTACAGATC................................................................................2111.00100100
........................................................................................................................................................................................................................................................................................AGGAACTCTGTGCGATTGCATT.......................................................................................................................2211.00100010
...............................................................................................................................................................................................CTG--AAATGCAAGTGATGGAA................................................................................................................................................................................................................2011.00100001
...........................................................................................................................................................................................................................................................................................................................TCGCATCGTTCTTCCTGTTACAGA..................................................................................2411.00110000
.......TTGTACAACCTTGCACCTCAAGCGATCGT.................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
.....................................................................................................................................................................GTGGGAAGCCAAT-T--------AAACTG--AAAT.............................................................................................................................................................................................................................2411.00101000
........................................................................................................................................................................................................................................................................................................................GAATCGCATCGTTCTTCCTGTTACAGAT.................................................................................2811.00101000
................................................................................................................................................................................................................................................................................................................AGCTTATGGAATCGCATCGTTCTTCCTG.........................................................................................2811.00100100
.............................................................................................................................................................................................................................................................................AATA-----AAAGGAACTCTGTGCGAT.............................................................................................................................2211.00100010
..........................................................................................................................................................................................................................................................................AATAATA-----AAAGGAACTCTGTGCGAT.............................................................................................................................2511.00100100
.........GTACAACCTTGCACCTCAAGCGATCGT.................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...........................................................................................................................................................................................................................................................................ATAATA-----AAAGGAACTCTGTGCGATTGC..........................................................................................................................2711.00100100
....................................................................................................................................................................................................................................................................AGAGAAAATAATA-----AAAGGA.........................................................................................................................................1920.50101000
droVir3
AAATGGTTTGTGCAGCCGTGCACCTCCAGCGATCGTCTGTTTGGACGCAGGTGAGT-CGCAA-----------AAGG----------GAG-T-TCGGTTT--------T-GAGTCGGCC--------------------------------GGCAAAAGGGGTTGGGGATGCACTTGCTCCGCTAATGG---CG--GCGCCCAATTGCTGAGAATTGTTTCCG----TTGGGCGT-CC------TCGGCA--TGCATCCCAGATTAAATAC-CTTCAGACTGGAACTCTGTGCGGCCGCATTCCAGCCTGTGCGCTCGCATCGTTCTTCCAGGCACATT----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCA.............................................................................................................................................................................................................................................21141.00410000000000001032400101000000041130000100000000000000000000000001
...................................................................................................................................................................TGGGGATGCACTTGCTCCG...............................................................................................................................................................................................................................................19116.0016009000000110000001001011000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTCGCATCGTTCTTCCAGGCAC.....................................................................................2216.006220000000000000000001000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTCGCATCGTTCTTCCAGGCACAT...................................................................................2415.005001000000000001101000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................TTCCG----TTGGGCGT-CC------TCGGCA--TGCATCCCA................................................................................................................................................................3015.005000000000000000000000000000000000000000000000000000000000000005
.....................................................................................................................................................................................................................................................................................GACTGGAACTCTGTGCGGCCG...........................................................................................................................2115.005000000000000000100000000001011100000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGC..............................................................................................................................................................................................................................................2014.004003000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATCCCAGATTAAATAC-CTTCAGA..............................................................................................................................................2314.004001000000000000010000000000000010010000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCT.............................................................................................................................................................................................................................................2113.003000000000000000010000000000000000110000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGTGCGGCCGCATTCCAGCCTGTGCGCT.........................................................................................................2813.003000000000000000100000000020000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATCCCAGATTAAATAC-CTTCAGACTG...........................................................................................................................................2613.003200000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................TGGGGATGCACTTGCTCAA...............................................................................................................................................................................................................................................1922.505000000000000000000100000000001000000000200000000000000000000100
.....................................................................................................................................................................................................................ATTGTTTCCG----TTGGGCGT-CC------TC...............................................................................................................................................................................2212.002100000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................TGTGCGGCCGCATTCCAGCCTGTGCGC..........................................................................................................2712.002000000000000000000000000000000010000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTCGCATCGTTCTTCCAGGCACA....................................................................................2312.002000000000000000001000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................TGGGCGT-CC------TCGGCA--TGCATCCCA................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000002
........................................................................................................................................................................................................................................................................................TGGAACTCTGTGCGGCCGCA.........................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTGCGGCCGCATTCCAGCCTGTGCGCT.........................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCTAATG.........................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ATTCCAGCCTGTGCGCTCGC......................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCC.............................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CAGACTGGAACTCTGTGCGGCCGCATTCCA....................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................TTGGGGATGCACTTGCTCCG...............................................................................................................................................................................................................................................2011.001000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCA................................................................................................................................................................................................................................................1821.002001000000000000000000000000000000100000000000000000000000000000
.............AGCCGTGCACCTCCAGCGATCGTC................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................GAGAATTGTTTCCG----TTGGGC............................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTCGCATCGTTCTTCCAGGCACATT----------------------------------------------------------------------------------2511.001000000000000000000000000000001000000000000000000000000000000000
.......................CTCCAGCGATCGTCTGTTTGGACGC.....................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................GCGT-CC------TCGGCA--TGCATCCCA................................................................................................................................................................2111.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGCATCGTTCTTCCAGGCACATT----------------------------------------------------------------------------------2311.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................GGGGATGCACTTGCTCCG...............................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................TGCACCTCCAGCGATCGTCTGTTTGGACGCA....................................................................................................................................................................................................................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000000000000100000000
.......................CTCCAGCGATCGTCTGTTTGGACGCA....................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................ATCCCAGATTAAATAC-CTTCAGACTGGAACTCTGTGC................................................................................................................................3711.001000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................GCTGAGAATTGTTTCCG----TT................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CTTCAGACTGGAACTCTGTGCGGCCGC..........................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................TCGCATCGTTCTTCCAGGCACAT...................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATCCCAGATTAAATAC-CTTCA................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGCATCCCAGATTAAATAC-.....................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.AATGGTTTGTGCAGCCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................GAATTGTTTCCG----TTGGGCGT-CC------TC...............................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TCGCATCGTTCTTCCAGG........................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCTAATGG---C....................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GAGAATTGTTTCCG----TTGGGCGT-CC------TC...............................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCTAATGG---CG--GC...............................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCTAATGG---.....................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CCAGATTAAATAC-CTTCAGACT............................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................CCCAGATTAAATAC-CTTCAGACTGGAAC.......................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................T-CC------TCGGCA--TGCATCCCAG...............................................................................................................................................................1911.001000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................TTGGGGATGCACTTGCTC.................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGCTA............................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................ATTGCTGAGAATTGTTTCCG----TTG...............................................................................................................................................................................................2311.001000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTGCGGCCGCATTCCAGCCTGTGCGC..........................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TTCAGACTGGAACTCTGTGCGGCC............................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................ATTGCTGAGAATTGTTTCCG----TTGGGC............................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................CTTCAGACTGGAACTCTGTGCGGCC............................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTCCGT..............................................................................................................................................................................................................................................2020.501000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGGGATGCACTTGCTAA................................................................................................................................................................................................................................................1880.131000000000100000000000000000000000000000000000000000000000000000
droMoj3
AAATGGTTCGTGCAGCCCTGCACTTCCAGCGATCGTCTCTTTGGGCGCAGGTGAGG-GATCCA----AT----CATA----------------------------------AATAT-TC------AACGAAAAAGGGGATGAAAT--GTTTCACAGAAACAG-TTTTGAT----------------------TG--TTGTGTATTCCATTGGAACTGCA--------------------------GGCAT---TCATCCCAGAGTAAACTATTTCCAGACTGGAACTCTGTGCGACTACATTGAAGCTTATGCAGTCGCATCGTTCTTCCAGCTACATTCCAG--AC-----TTG------------------------------------------------------------ATTTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................AGGGGATGAAAT--GTTTCACAGAAACAG-T.................................................................................................................................................................................................................................................................28112.00122000010
.....................................................................................................................................AGGGGATGAAAT--GTTTCACA..........................................................................................................................................................................................................................................................................20112.0012200343
................................................................................................................................................................................................................................................................................................TGTGCGACTACATTGAAGCTTATGCAGT.........................................................................................................2819.009300015
............................................................................................................................................................................................................................................................................................................................CGCATCGTTCTTCCAGCTACATTCC................................................................................2518.008110051
............................................................................................................................................................................................................................................................................................................................CGCATCGTTCTTCCAGCTACATTC.................................................................................2415.005202001
........................................................................................................................................................................................................................................................................................................................CAGTCGCATCGTTCTTCCAGCT.......................................................................................2215.005010040
...............................................................................................................................................................................................................................................................................................CTGTGCGACTACATTGAAGCTTATGCAGT.........................................................................................................2913.003300000
........................................................................................................................................................................................................................................................................................................................CAGTCGCATCGTTCTTCCAGC........................................................................................2112.002100010
.....................................................................................................................................................................................................................ACTGCA--------------------------GGCAT---TCATCCCAGAGTA...........................................................................................................................................................2412.002000020
......................................................................................................................................GGGGATGAAAT--GTTTCACA..........................................................................................................................................................................................................................................................................1912.002200000
...........................................................................................................................................................................................................................................................................................................................TCGCATCGTTCTTCCAGCTACAT...................................................................................2312.002101000
........................................................................................................................................................................AT----------------------TG--TTGTGTATTCCATTG..................................................................................................................................................................................................................1912.002200000
..............................................................................................................................................................................................................................................................................................................................CATCGTTCTTCCAGCTACATTCC................................................................................2312.002010010
.....................................................................................................................................AGGGGATGAAAT--GTTTCACAGA........................................................................................................................................................................................................................................................................2212.002000020
....................................................................................................................................................................................................................................................................................AGACTGGAACTCTGTGCGACT............................................................................................................................2112.002100001
...........................................................................................................................................................................................................................................................................................................................TCGCATCGTTCTTCCAGCTACATTC.................................................................................2512.002000002
.......................................................................................................................................................................................................................TGCA--------------------------GGCAT---TCATCCCAGAGTA...........................................................................................................................................................2212.002200000
........................................................................................................................................................................................................................................................................................................................CAGTCGCATCGTTCTTCCAGCTA......................................................................................2311.001010000
......................................................................................................................................................................................................................................................................................................ACTACATTGAAGCTTATGCAGTCG.......................................................................................................2411.001000010
..............................................................................................................................................................................................................................................................CATCCCAGAGTAAACTATTTCCAGACTG...........................................................................................................................................2811.001000001
.......................................................................................................................................................................GAT----------------------TG--TTGTGTATTCCATTGGA................................................................................................................................................................................................................2211.001000001
...........................................................................................................................................................................................................................................................................................................ATTGAAGCTTATGCAGTCGCATCGTTC...............................................................................................2711.001100000
......................................................................................................................................................................................................................CTGCA--------------------------GGCAT---TCATCCCAGAGTAAA.........................................................................................................................................................2511.001000010
..............................................................................................................................................................................................................CATTGGAACTGCA--------------------------GGCAT---TCATCCCAG...............................................................................................................................................................2711.001100000
......................................................................................................................................GGGGATGAAAT--GTTTCACAG.........................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................GAACTGCA--------------------------GGCAT---TCATCCCAGAGTA...........................................................................................................................................................2611.001000010
..................................................................................................................................................................................................................................................................CCAGAGTAAACTATTTCCAG...............................................................................................................................................2011.001000001
...............................................................................................................................................................................................................................................................ATCCCAGAGTAAACTATTTC..................................................................................................................................................2011.001000100
..............................................................................................................................................................................................................................................................CATCCCAGAGTAAACTATTT...................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................GAACTGCA--------------------------GGCAT---TCATCCCAGAGT............................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................GACTGGAACTCTGTGCGACTA...........................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................TCGTTCTTCCAGCTACATTCC................................................................................2111.001000010
.................................................................................................................................................................................................................................................................................................................................CGTTCTTCCAGCTACATTC.................................................................................1911.001100000
........................................................................................................................................................................................................................................................AT---TCATCCCAGAGTAAAC........................................................................................................................................................1811.001000010
................................................................................................................................................................AG-TTTTGAT----------------------TG--TTGTGTATTCCATTGGA................................................................................................................................................................................................................2811.001000001
............................................................................................................................................................................................................TCCATTGGAACTGCA--------------------------GGCAT---TCAT....................................................................................................................................................................2411.001100000
................................................................................................................................................................................................................................................................................................TGTGCGACTACATTGAAGCTTATGCAGC.........................................................................................................2811.001000010
...........................................................................................................................................................................................................................................................................................................ATTGAAGCTTATGCAGTCGCATC...................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................................TGCAGTCGCATCGTTCTTCCAG.........................................................................................2211.001100000
.....................................................................................................................................AGGGGATGAAAT--GTTTCACAGAAA......................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................AGGGGATGAAAT--GTTTCACAT.........................................................................................................................................................................................................................................................................2111.001000010
..............................................................................................................................................................................................................................................................CATCCCAGAGTAAACTATTTCCAG...............................................................................................................................................2411.001000001
........................................................................................................................................................................................................................................................................................................................CAGTCGCATCGTTCTTCCAGCTT......................................................................................2311.001000010
........................................................................................................................................................................................................................................................................................................................CAGTCGCATCGTTCTTCCAGCTAC.....................................................................................2411.001001000
.......................................................................................................................................................................GAT----------------------TG--TTGTGTATTCCATTG..................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................ATCCCAGAGTAAACTATTTCCAGACTG...........................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................CAGTCGCATCGTTCTTCCAGCC.......................................................................................2211.001000010
.....................................................................................................................................AGGGGATGAAAT--GTTTCAC...........................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................CAGACTGGAACTCTGTGCGACTACA.........................................................................................................................2511.001100000
.............................................................................................................................................................................................................................................................................................................................GCATCGTTCTTCCAGCTACATTCC................................................................................2411.001000010
.....................................................................................................................................................................................................................................................................................GACTGGAACTCTGTGCGACT............................................................................................................................2011.001000010
.....................................................................................................................................AGGGGATGAAAT--GTTTCACAGAA.......................................................................................................................................................................................................................................................................2311.001000001
.....................................................................................................................................AGGGGATGAAAT--GTTTCACAG.........................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................GTTCTTCCAGCTACATTCC................................................................................1911.001000010
.....................................................................................................................................AGGGGATGAAAT--GTTTCACAGAAAC.....................................................................................................................................................................................................................................................................2511.001001000
.....................................................................................................................................................TTCACAGAAACAG-TTTTGAT----------------------TG--.................................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................ATTGAAGCTTATGCAGTC........................................................................................................1811.001000010
.................................................................................................................................................................G-TTTTGAT----------------------TG--TTGTGTATTCCATTGG.................................................................................................................................................................................................................2611.001000001
droGri2
AAGTGGTTCGTGCAGCCCTGCACTTCCAGCGATCGTCTCTTTGGACGCAGGTTAGT-TGACTT----CC----AGTG-G-----------AATGTTGTTT--------GAA--------------------------------AT--------------CTATTTCGGATGTACTTTC-CAACAAATTAAAC-----GGTTTAACGGCTGAGAGCAATTCCCG----TTGAACGT-TTTCCA---AAGCG----CATCCCAGATTAAATG--------ACTGGAACTCTGTGCGTGCGCATGGAAGTCTCTGAGCACGCATCGTTCTTCCAGTCACAATTCCC-AACT--TATT------------------------------------------------------------------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................ACGCATCGTTCTTCCAGTCACAATT.................................................................................2512.00211
............................................................................................................................................................................................................................................................................TG--------ACTGGAACTCTGTGCGTGCGA..........................................................................................................................2311.00110
............................................................................................................................................................................................................................................................................TG--------ACTGGAACTCTGTGCGTGCG...........................................................................................................................2211.00110
...........................................................................................................................................................................................................................................................................ATG--------ACTGGAACTCTGTGCGTGCG...........................................................................................................................2311.00101
...............................................................................................................................................................................................................................................................ATCCCAGATTAAATG--------ACTGGAACT......................................................................................................................................2411.00110
......................................................................................................................................................................................................................................................................................ACTGGAACTCTGTGCGTGC............................................................................................................................1911.00110
...........................................................................................................................................................................................................................................................................ATG--------ACTGGAACTCTGTGCGTG.............................................................................................................................2111.00101

Generated: 05/17/2015 at 10:37 PM