ID:

dse_765

 Coordinate:

scaffold_109:27575-27725 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.3 -23.3 -23.2

Flybase annnotation

exon [dsec_GLEANR_13874:2]; CDS [Dsec\GM13285-cds]; intron [Dsec\GM13285-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
mature
  1. scaffold_2778:4237-4261 -
  2. scaffold_26:693239-693263 +
  3. scaffold_6:302965-302989 +
  4. scaffold_7:2706355-2706379 +
  5. scaffold_11:2550263-2550287 -
  6. scaffold_18:1282-1306 -
  7. scaffold_23:982046-982070 -
  8. scaffold_30:551227-551251 -
  9. scaffold_40:19524-19548 +
  10. scaffold_75:129027-129051 -
  11. scaffold_87:91359-91383 +
  12. dse_765  scaffold_109:27595-27619 +
  13. scaffold_11695:784-808 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTTCTCATTGTATTCCGCAATATTTATCGATATCCCAGTAAAATGATGAAATTTTGCGTTCGCATTATTACTAGCTGAGTAACGGGTATCTGATAGTCGGGGAACTTTGTCGTGTTTTCACTTGCCATTCTAATTAATGTTTTGTTTGGTTCCATTCTATTTTCCGCTCATGACTAATTGGTGCTTTCACTAATTGCAGATCCGACGATACTACCTATTCGTCTCGCAGCCAACGTCCAGTGTGGTCTG
**************************************************.(((..(((....)))..)))......(((((....((.....(((((....((((((.....(((....)))....((((......))))........))))))...)))))..)))))))....(((((((((....)))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
......................................................................................................................................................................................................................ACCTATTCTTCTCGCAGCCAAC............... 22 1 1 1.00 1 1 0 0
.............................................................................................................................................................................................CACTAATTGCAGATCCGA............................................ 18 0 1 1.00 1 0 1 0
................................................TGAAATTTTGCGTTCGCATTACTA................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0
......................................................................TACTAGCTGAGTAACGGGTATCTGA............................................................................................................................................................ 25 0 13 0.08 1 0 1 0
.................................................................................TAACGGGTATCTGATAGTCGG..................................................................................................................................................... 21 0 20 0.05 1 0 1 0
..........................................................................AGCTGAGTAACGGGTATCTGATAGTC....................................................................................................................................................... 26 0 20 0.05 1 1 0 0
.............................................................................TGAGTAACGGGTATCTGATAGTCGGG.................................................................................................................................................... 26 0 20 0.05 1 0 1 0
.........................................................................TAGCTGAGTAACGGGTATCTG............................................................................................................................................................. 21 0 20 0.05 1 0 0 1

Anti-sense strand reads

AAAAAGAGTAACATAAGGCGTTATAAATAGCTATAGGGTCATTTTACTACTTTAAAACGCAAGCGTAATAATGATCGACTCATTGCCCATAGACTATCAGCCCCTTGAAACAGCACAAAAGTGAACGGTAAGATTAATTACAAAACAAACCAAGGTAAGATAAAAGGCGAGTACTGATTAACCACGAAAGTGATTAACGTCTAGGCTGCTATGATGGATAAGCAGAGCGTCGGTTGCAGGTCACACCAGAC
**************************************************.(((..(((....)))..)))......(((((....((.....(((((....((((((.....(((....)))....((((......))))........))))))...)))))..)))))))....(((((((((....)))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V115
head
 M054
female body
......................................................................................................................................................................................................GTCTAGGCTGCTATGATG................................... 18 0 1 1.00 1 0 1 0
......................................................................................................................................................CAAGGTAAGATAAAAGGCGAGTA.............................................................................. 23 0 1 1.00 1 1 0 0
.....................................................AAAACGCAAGAGTAATAA.................................................................................................................................................................................... 18 1 3 0.33 1 1 0 0
..................................................................................................................ACAAAAGAGAAGGGTAAGGTTA................................................................................................................... 22 3 7 0.14 1 1 0 0
.....................................................................................................................................................................................CAACGAAAGTGGTTGACGTC.................................................. 20 3 17 0.06 1 0 1 0
..............................................................................CTCATTGCCCATAGACTATCAG....................................................................................................................................................... 22 0 20 0.05 1 0 0 1
......................................................................................................................................................GAAGGAAAGATAAAAGGC................................................................................... 18 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_109:27525-27775 + dse_765 TTTTTCTC---------------------ATTG----TAT------TCCGCAATATTTATCGATATCCCAGTA-----AAATGATGAAAT-------------------------TTTGCG---------TTCGCATTATTACTAGCTGAGTAACGGGTATCTGATAGTCGGGGAACTT----------------------TGTCG-------------TGTTTTCACTTGCCATT---CTAATTAATGTTTTGTTTG-----GT----------TC-CA-----------TTCTATTTTCCGCTC-A----------------------------------------------T--------------------------------------GACTAATTGGTGC-TTT--CACTAATTGC--AGATCCGACGATACTACCTATTCGTCTCGCAGCCAACGTCCAGTGTGGTCTG
droSim2 2r:3183663-3183913 + dsi_2901 TTTTTCTC---------------------AATG----TAT------TCCGCAATATTTATCGATATCCCAGTA-----AAATGATGCAAT-------------------------TTTGCG---------TTCGCATTATTACTAGCTGAGTAACGGGTATCTGATAGTCGGGGAACTT----------------------TGTCG-------------TGTTTTCACTTGCCATT---CTAATTAATGTTTTGTTTG-----GT----------TC-CA-----------TTCTATTTTCCGCTC-A----------------------------------------------T--------------------------------------GACTAATTGGTGC-TTT--CACTAATTGC--AGATCCGACGATACTACCTATTCGTCTCGCAGCCAACGTCCAGTGTGGTCTG
dm3 chrXHet:69182-69437 - TTTTTTTG-------------T--------TTG---------------ATTGAAAACTATGGTAATCAAAATA-----T------GACATGCAGAGCAGACTAAGATTCGTCTAC---------------------AGGTAC-----------------------TAGTTTCGGGAGTGGTCGTTAATTTACGTTCTTGTTTGTCGTACA---------TGTTTGCACTTGCCATT---GTAATTTATGTTTTGTTTG-----GT----------TC-CA-----------TTCCATTTTCCGCTC-A----------------------------------------------T--------------------------------------GACTAATTGGTGC-TTT--CACTAATTAC--AGATCCGACGATACTACCTATTCGTCCCGCAGCCGACGTCCAGTGTGGTCCG
droEre2 scaffold_4929:5325274-5325496 - TTTTTTTA-------------ATTTTATCATTT----TTT------TCCCCAATTCCTACCGATATTCCAG-A-----AAATGTTTAAAT-------------------------ATCTCG---------TTTGCACTTCCACTAGCTAAGTAACGGGTATCTGATAGTCTGGGAACTCGAC-------------------TATAGCATTTTATCTTGT-------------T--T---ATAA--AATACTTT---------------------------------------------------------------------------ATGGAATTCCCCTTGATCA-------C--------------------------------------GAC---TCTTTCC-CAT--CACTGGTTAA--ATATCTTATGTTATC--TTACTTATCG---------------------CACA
droYak3 3R:6987864-6988069 - ATTTTTAA-------------A--------AAATTTTTTT------TTCTCAATTTCTACCGATGTTCCAG-A-----AAATGTTGAAAT-------------------------GTAT-------------------------CGTTGAGTAAGGAGTATCTGATAGTCTGGGAACAT----------------------TC----------TCTTGT-------------T-----------------------AA-----AT----------TT-TA-----------CTTCTTTTCTTGCCA-A----------------------------------------------T--------------------------------------TTCT-ATCGGCAC-ACC--GTCGAGTTACCTCGGTCCATTAATACGACTTACATTTCTCTTAGCGAACATTTAAAA---TATG
droEug1 scf7180000409474:1682550-1682793 - TTCCTCTG-------------A--------CAATA--GGTGGCGCATTG---TGAATTTCCACTAGCAAAATA-----ATATTTTAAAAT-------------------------TTTG------------------------TAAAACAGTAACGGGTATCTTATAGTCGCGGCACCCGAC-------------------TATAGCGTTTCCTCTTTT-------------TTT--------CTCTCGCTTTTTTCGGTTTTGC----------TG-CTTTGCTTTGTTGTTG---------TGC-A------T-------------ATGTAATTTCTGCTGTCCG-------------------------------------------------------GGAC-GGT--AATCCATTGC--AGAGATAATTA-ATTACTTA-ACAGCAAGCAGCCAACA----------TCCA
droBia1 scf7180000302422:8217441-8217615 + GTGGCG--------------------------------------CCCT-----AAAATATCGCTTTTCTGCTT-----ATATATCTTAAT-------------------------TATCCT---------TTTGCT--CCCTTAAGCCGAGTAATGGGTTTCTGATAGTCGTGTTTTTT--T-------------------AGTAGC--------------------------------------------------------GT----------TC-CA-----------AACTCATTTCCCCA--G----------------------------------------------T--------------------------------------AACAGAATGTTTT-TTT--CCTTTCCAGC--AAA----ATGATACTACTTAA-----------------------TTGCCTCG
droTak1 scf7180000414140:1472-1691 - TTTTGGAAAAGTAAAAATGCAGTTTT---ATTG----TAT------TTATCAATACCTATCGAAATGTTA----------------CG-------GCGGATCAAAGTTTTTCTCCATCTCC---------TTCGCACTCCCTTTTGCTGAGTAACGAGTATCTGATAGTCGGGGCACCCGAC-------------------CATAGCGTTCTCTCTTGT-------------T-----------------------AA-----ATATA--T------A-T-----------TTGTG---------C-A------T-------------GTCTAAACTCTTTTGACCAAT-ATGT--------------------------------------------GGTTATAC--TT--CACTTATTAC-----------------------------------------------------A
droEle1 scf7180000490712:52741-52930 + TTGTTATT---------------------ATTT----CTT------TAACAAATAATTATGGGCATTACCGTA-----AACT-T----------------------------GCCGACAGACGGCGCTACCTAGAACGCGACTATTTTCAGTAACAGGAATCTGATAGTCGGGGCACTCGAC-------------------CACATCATTCCTTTTTCT-------------T----------TTTGTGTTTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAATTAT--AAATCA----------------------CTGATTATTAAATTATC-TTTTTA
droRho1 scf7180000761782:738-927 - AATTCTCG-------------A--------TAACG--ATT------TCT--ATTATAAATCGAGCGGCGAAAAACATACAAGAAGGCATA-------------------------TTTACA---------TTCAGTT---GTTTAGCTGAGTAACGGGTATCTAATAGTCGAGGGACTCGTC-------------------TATCGCGTTCTCTCTTGT-------------TTTC---TTTATTTTTGTATTATTTA-----AC----------TG-TA-----------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTCAATGCTCAACAGAATA-----ATTG
droFic1 scf7180000453495:211631-211803 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTTGGCATT---GTAATTAATGTGTTGTTTG-----GTTTGGT-----TC-CA-----------TTCTATTTTCTGCCC-A----------------------------------------------CGATGTGGCTGTGCCTGT----GAAT-GTGCCCC----CGTCTAATTGGTGC-TTC--CACTAATTAC--AGATCCGACGATACAACGTATGCGTCCCGCGGCCGACGGACAGTGTGCTCCG
droKik1 scf7180000302610:754552-754720 + CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTTGCCATT---GTAATTAATGTTTTGTTTG-----GTCGCGTCGCCTCCCAT-----------TTCTATTTTCTGCCCCA----------------------------------------------TGATGTTCT-C---TTTTGT-TTTTTTCTGCCTTTCCCTAACTAATTGCCGC-CTC--CACTAATTAC--AGATCCAACGATACCAC------------TAGCAGCAGCACAG-GTGG--TG
droAna3 scaffold_12929:946137-946326 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTCGCCATT---GTAATTAATGTTTTGTTTG-----GACGCAG-----G-CAG-----------TTCTATTTTCTGCTCCATCCACACCACAGAGTGCCACACAGAGTT--------------------------------CCAAGT-TGAGTCCAGCCTT----TAACTAATTGGTGCCTTT--CACTAATTAC--AGATTCGACGATA---CGTTTACGAGCCGGGGCCGAAGGACTGTCTGCACCA
droBip1 scf7180000394786:47237-47413 + CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTCGCCATT---GTAATTAATGTTTTGTTTG-----GACGC-------G-CAG-----------TTCTATTTTCAACC--ATCC-------AGAGTG--ACCCGGAGT---------------------------------CCGAGTCCGAGTCCTGCCTT----TAACTAATTGGTGCCTTT--CACTAATTAC--AGATTCGACGATA---CGTTTACGAGCCGCGGCCGGAGGACAGTGTGCTCCG
dp5 XL_group1e:514797-514946 + CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCTTTTGCCATT---GTAATTAATGCTTTGTTTG-----GTTGC--C------C-T-----------TTCTA---------C-A------T-------------ATCTAAATTTGTTCATCTATTTTTGT--------------------------------------------TGTGGTGC-TTC--CACTAATTAC--AGATTCGACGATA---CGTATGCAGCCCGTGGACGGCTAACAATTTGCTCAG
droPer2 scaffold_30:699586-699735 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCTTTTGCCATT---GTAATTAATGCTTTGTTTG-----GTTGC--C------C-T-----------TTCTA---------C-A------T-------------ATCTAAATTTGTTCATCTATTTTTGT--------------------------------------------TGTGGTGC-TTC--CACTAATTAC--AGATTCGACGATA---CGTATGCAGCCCGTGGACGGCTAACAATTTGCTCAG
droWil2 scf2_1100000004909:6646816-6646930 - G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTACATTTGGCATTGTTGTAATTAATGTTTTGTTTG------------------------------------------------------------------------------------------------------------------------------------------TACTTGGTTACTTCCCAACTAATTAC--AGATTCGGCGATA---CGTATGCGCCCCGTGGGCGTCAAACCATTTGCTCCG
droVir3 scaffold_12928:245077-245180 + TTGTAATT---------------------AATG----TTT------TCG---------------------------------------------------------------GCCGCCCCT-----------------------------------------------------------------------------------------------CGC-------------CCC-----------------------------------------------------------------------------------------------------------------TTTTAT--------------------------------------------G-----GC-CGT--GCCTAATTAC--AGATTCGGCGATA---CGTATGCGCCCCGTGGCCGGCAAACGATTTGCTCGG
droMoj3 scaffold_6359:1587558-1587658 + TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTAATGTTTACATCA-----GC----------CC-CA-----------GTCGCTAACCCG--------------------------------------------------------------------------------------------------------CTT--GCCTAATTAC--AGATCGGGCATTA---CGTATGCGCCCCGTGGCCGGCAAACAATTTGCTCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TTTTTCTC---------------------ATTG----TAT------TCCGCAATATTTATCGATATCCCAGTA-----AAATGATGAAAT-------------------------TTTGCG---------TTCGCATTATTACTAGCTGAGTAACGGGTATCTGATAGTCGGGGAACTT----------------------TGTCG-------------TGTTTTCACTTGCCATT---CTAATTAATGTTTTGTTTG-----GT----------TC-CA-----------TTCTATTTTCCGCTC-A----------------------------------------------T--------------------------------------GACTAATTGGTGC-TTT--CACTAATTGC--AGATCCGACGATACTACCTATTCGTCTCGCAGCCAACGTCCAGTGTGGTCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................CACTAATTGC--AGATCCGA............................................1811.0010010
............................................................................................................................................TACTAGCTGAGTAACGGGTATCTGA.......................................................................................................................................................................................................................................................................................................................25130.0810010
.......................................................................................................................................................TAACGGGTATCTGATAGTCGG................................................................................................................................................................................................................................................................................................................21200.0510010
................................................................................................................................................AGCTGAGTAACGGGTATCTGATAGTC..................................................................................................................................................................................................................................................................................................................26200.0511000
...................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGG...............................................................................................................................................................................................................................................................................................................26200.0510010
...............................................................................................................................................TAGCTGAGTAACGGGTATCTG........................................................................................................................................................................................................................................................................................................................21200.0510001
droSim2
TTTTTCTC---------------------AATG----TAT------TCCGCAATATTTATCGATATCCCAGTA-----AAATGATGCAAT-------------------------TTTGCG---------TTCGCATTATTACTAGCTGAGTAACGGGTATCTGATAGTCGGGGAACTT----------------------TGTCG-------------TGTTTTCACTTGCCATT---CTAATTAATGTTTTGTTTG-----GT----------TC-CA-----------TTCTATTTTCCGCTC-A----------------------------------------------T--------------------------------------GACTAATTGGTGC-TTT--CACTAATTGC--AGATCCGACGATACTACCTATTCGTCTCGCAGCCAACGTCCAGTGTGGTCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................TAGCTGAGTAACGGGTATCTGATA.....................................................................................................................................................................................................................................................................................................................24208.001600000160000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGC-TTT--CACTAATTGC--AGATCCGACGA.........................................2712.00200000011000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................T--CACTAATTGC--AGATCCGACGATACT.....................................2611.00100000010000000000
................................................................................................................................................................................................................................TCACTTGCCATT---CTAATT.......................................................................................................................................................................................................................................1811.00100000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAGTGTGGTCTG1811.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TT--CACTAATTGC--AGATCCGACGATACT.....................................2711.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTCTCGCAGCCAACGTCCAGT........2511.00100001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC--AGATCCGACGATACTACCTATT..............................2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGC-TTT--CACTAATTGC--AGATCCGA............................................2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGC--AGATCCGACGATACTAC...................................2411.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................CACTAATTGC--AGATCCGACGATACT.....................................2511.00100000010000000000
...........................................................................................................................................................GGGTATCTGATAGTCGGGGAACTT----------------------T..................................................................................................................................................................................................................................................................................2511.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................T--CACTAATTGC--AGATCCGACGATACTAC...................................2811.00100000000000010000
................................................................................................................................................................TCTGATAGTCGGGGAACTT----------------------TGTCG-------------TGTT.............................................................................................................................................................................................................................................................2811.00100000010000000000
...................................................................................................................................................TGAGTAACGGGTATCTGATAGT...................................................................................................................................................................................................................................................................................................................22200.8016000100000000150000
...................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGG...............................................................................................................................................................................................................................................................................................................26200.6513000000000013000000
...............................................................................................................................................TAGCTGAGTAACGGGTATCTGATAGT...................................................................................................................................................................................................................................................................................................................26200.6513000000000000130000
...................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGG................................................................................................................................................................................................................................................................................................................25200.40800000000000080000
...........................................................................................................................................................GGGTATCTGATAGTCGGGGAACT..........................................................................................................................................................................................................................................................................................................23200.35700000070000000000
...........................................................................................................................................................GGGTATCTGATAGTCGGGGAACTT----------------------...................................................................................................................................................................................................................................................................................24180.22400000002200000000
...................................................................................................................................................TGAGTAACGGGTATCTGATAG....................................................................................................................................................................................................................................................................................................................21200.20400000040000000000
...................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGGGAA............................................................................................................................................................................................................................................................................................................29200.15300000030000000000
...........................................................................................................................................................GGGTATCTGATAGTCGGGGAA............................................................................................................................................................................................................................................................................................................21200.15300000002100000000
...................................................................................................................................................TGAGTAACGGGTATCTGATAGTCGGGGA.............................................................................................................................................................................................................................................................................................................28200.15300000003000000000
...............................................................................................................................................TAGCTGAGTAACGGGTATCT.........................................................................................................................................................................................................................................................................................................................20200.10200000000002000000
.............................................................................................................................................ACTAGCTGAGTAACGGGT.............................................................................................................................................................................................................................................................................................................................18200.10200000000002000000
..............................................................................................................................................................TATCTGATAGTCGGGGAACT..........................................................................................................................................................................................................................................................................................................20200.10220000000000000000
....................................................................................................................................................GAGTAACGGGTATCTGATAGTCGGGGA.............................................................................................................................................................................................................................................................................................................27200.10200000000200000000
................................................................................................................................................................TCTGATAGTCGGGGAACTT----------------------...................................................................................................................................................................................................................................................................................19190.05100100000000000000
................................................................................................................................................AGCTGAGTAACGGGTATCTGATAGTCG.................................................................................................................................................................................................................................................................................................................27200.05100000010000000000
..................................................CAATATTTATCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
..............................................................................................................................................CTAGCTGAGTAACGGGTATCTGAT......................................................................................................................................................................................................................................................................................................................24200.05100000000000001000
........................................................................................................................................................AACGGGTATCTGATAGTC..................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
............................................................................................................................................TACTAGCTGAGTAACGGGTATCTG........................................................................................................................................................................................................................................................................................................................24200.05100000000001000000
................................................................................................................................................AGCTGAGTAACGGGTA............................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
.......................................................................................................................................................TAACGGGTATCTGATAGTCGGGGA.............................................................................................................................................................................................................................................................................................................24200.05100000000000010000
...............................................................................................................................................TAGCTGAGTAACGGGTATCTG........................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
.......................................................................................................................................................TAACGGGTATCTGATA.....................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
............................................................................................................................................TACTAGCTGAGTAAC.................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
................................................................................................................................................AGCTGAGTAACGGGTATCTGATAGTCGGG...............................................................................................................................................................................................................................................................................................................29200.05100010000000000000
.............................................................................................................................................................GTATCTGATAGTCGGGGA.............................................................................................................................................................................................................................................................................................................18200.05110000000000000000
..........................................................................................................................................................CGGGTATCTGATAGTCGGGGAA............................................................................................................................................................................................................................................................................................................22200.05100000000001000000
.........................................................................................................................................................ACGGGTATCTGATAGTCGGGG..............................................................................................................................................................................................................................................................................................................21200.05100000000000010000
dm3
TTTTTTTG-------------T--------TTG---------------ATTGAAAACTATGGTAATCAAAATA-----T------GACATGCAGAGCAGACTAAGATTCGTCTAC---------------------AGGTAC-----------------------TAGTTTCGGGAGTGGTCGTTAATTTACGTTCTTGTTTGTCGTACA---------TGTTTGCACTTGCCATT---GTAATTTATGTTTTGTTTG-----GT----------TC-CA-----------TTCCATTTTCCGCTC-A----------------------------------------------T--------------------------------------GACTAATTGGTGC-TTT--CACTAATTAC--AGATCCGACGATACTACCTATTCGTCCCGCAGCCGACGTCCAGTGTGGTCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCGACGTCCAGTGTGGTCA.2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAC--AGATCCGACGATACTACCTATTCGT...........................2813.0030000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TTTACGTTCTTGTTTGTCGTA............................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
................................................................................................................TAC---------------------AGGTAC-----------------------TAGTTTCGGGAGTGGTC......................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000020000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACCTATTCGTCCCGCAGCCGACG..............2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCTATTCGTCCCGCAGCCGACGTC............2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGCAGCCGACGTCCAGTGTGGTCC.2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTATTCGTCCCGCAGCCGACGTC............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGTCCCGCAGCCGACGTC............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGTCCCGCAGCCGACGTCCAG.........2512.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCCGCAGCCGACGTCC...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................TTCGTCTAC---------------------AGGTAC-----------------------TAGTTTCGGG.............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCCGACGTCCAGTGTGG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTCCCGCAGCCGACGTCCAGTGT......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................AC---------------------AGGTAC-----------------------TAGTTTCGGGAG...........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACCTATTCGTCCCGCAGCCGACGTC............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................TC-CA-----------TTCCATTTTCCGCTC-A----------------------------------------------T--------------------------------------GAC................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AC-----------------------TAGTTTCGGGAGTGGTC......................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTCCCGCAGCCGACGTC............2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTCCCGCAGCCGACGTCCAG.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCCGCAGCCGACGTCCAGTGTGG....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGACGATACTACCTATTCGTCCCGCAG....................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATTCGTCCCGCAGCCG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................TCTAC---------------------AGGTAC-----------------------TAGTTTCGGGAGTGG........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................GCAGACTAAGATTCGTCTAC---------------------AGGTAC-----------------------TAG....................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCGCAGCCGACGTCCAGTGTGGTC..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGACGTCCAGTGTGGTC..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCTATTCGTCCCGCAGCCGACGTC............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TAAGATTCGTCTAC---------------------AGGTAC-----------------------TAGTT..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TAATTAC--AGATCCGACGATACTACC..................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGACGTCCAGTGTGGTCCG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTATTCGTCCCGCAGCCGACGTCC...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGACGTCCAGTGTGGTCC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CTC-A----------------------------------------------T--------------------------------------GACTAATTGGTGC-TTT--CAC.............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................ACATGCAGAGCAGACTAAGAT.................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATTCGTCCCGCAGCCGACGTCC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTATTCGTCCCGCAGCCG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGACGTCCAGTGTGGTCCG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGACGTCCAGTGTGGTC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACGATACTACCTATTCGTCCCGC......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAC---------------------AGGTAC-----------------------TAGTTTCGGGAGTGGT.......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATTCGTCCCGCAGCCG.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AGCAGACTAAGATTCGTCTA..........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACGATACTACCTATTCGTCCCGCA.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCGTCCCGCAGCCGACGTC............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCGACGTCCAGTGTGGTC..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CACTAATTAC--AGATCCGACGATACTACC..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TAAGATTCGTCTAC---------------------AGGTAC-----------------------TAGT...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCTATTCGTCCCGCAGCCGACGTCC...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACCTATTCGTCCCGCAGCCG.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCCGCAGCCGACGTCCA..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................TCTAC---------------------AGGTAC-----------------------TAGTTTCGGGAGTG.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................GTTTGTCGTACA---------TGTTTGCACT.......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droEre2
TTTTTTTA-------------ATTTTATCATTT----TTT------TCCCCAATTCCTACCGATATTCCAG-A-----AAATGTTTAAAT-------------------------ATCTCG---------TTTGCACTTCCACTAGCTAAGTAACGGGTATCTGATAGTCTGGGAACTCGAC-------------------TATAGCATTTTATCTTGT-------------T--T---ATAA--AATACTTT---------------------------------------------------------------------------ATGGAATTCCCCTTGATCA-------C--------------------------------------GAC---TCTTTCC-CAT--CACTGGTTAA--ATATCTTATGTTATC--TTACTTATCG---------------------CACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................CTGGGAACTCGAC-------------------TATAGC.............................................................................................................................................................................................................................................................................1990.1110000100
....................................................................................................................................TGCACTTCCACTAGCTAAT.....................................................................................................................................................................................................................................................................................................................................19190.0511000000
droYak3
ATTTTTAA-------------A--------AAATTTTTTT------TTCTCAATTTCTACCGATGTTCCAG-A-----AAATGTTGAAAT-------------------------GTAT-------------------------CGTTGAGTAAGGAGTATCTGATAGTCTGGGAACAT----------------------TC----------TCTTGT-------------T-----------------------AA-----AT----------TT-TA-----------CTTCTTTTCTTGCCA-A----------------------------------------------T--------------------------------------TTCT-ATCGGCAC-ACC--GTCGAGTTACCTCGGTCCATTAATACGACTTACATTTCTCTTAGCGAACATTTAAAA---TATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................AAGGAGTATCTGATAGTCTGGGA.............................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
TTCCTCTG-------------A--------CAATA--GGTGGCGCATTG---TGAATTTCCACTAGCAAAATA-----ATATTTTAAAAT-------------------------TTTG------------------------TAAAACAGTAACGGGTATCTTATAGTCGCGGCACCCGAC-------------------TATAGCGTTTCCTCTTTT-------------TTT--------CTCTCGCTTTTTTCGGTTTTGC----------TG-CTTTGCTTTGTTGTTG---------TGC-A------T-------------ATGTAATTTCTGCTGTCCG-------------------------------------------------------GGAC-GGT--AATCCATTGC--AGAGATAATTA-ATTACTTA-ACAGCAAGCAGCCAACA----------TCCASizeHit CountTotal NormTotal
No Reads
droBia1
GTGGCG--------------------------------------CCCT-----AAAATATCGCTTTTCTGCTT-----ATATATCTTAAT-------------------------TATCCT---------TTTGCT--CCCTTAAGCCGAGTAATGGGTTTCTGATAGTCGTGTTTTTT--T-------------------AGTAGC--------------------------------------------------------GT----------TC-CA-----------AACTCATTTCCCCA--G----------------------------------------------T--------------------------------------AACAGAATGTTTT-TTT--CCTTTCCAGC--AAA----ATGATACTACTTAA-----------------------TTGCCTCGSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTGGAAAAGTAAAAATGCAGTTTT---ATTG----TAT------TTATCAATACCTATCGAAATGTTA----------------CG-------GCGGATCAAAGTTTTTCTCCATCTCC---------TTCGCACTCCCTTTTGCTGAGTAACGAGTATCTGATAGTCGGGGCACCCGAC-------------------CATAGCGTTCTCTCTTGT-------------T-----------------------AA-----ATATA--T------A-T-----------TTGTG---------C-A------T-------------GTCTAAACTCTTTTGACCAAT-ATGT--------------------------------------------GGTTATAC--TT--CACTTATTAC-----------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
TTGTTATT---------------------ATTT----CTT------TAACAAATAATTATGGGCATTACCGTA-----AACT-T----------------------------GCCGACAGACGGCGCTACCTAGAACGCGACTATTTTCAGTAACAGGAATCTGATAGTCGGGGCACTCGAC-------------------CACATCATTCCTTTTTCT-------------T----------TTTGTGTTTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAATTAT--AAATCA----------------------CTGATTATTAAATTATC-TTTTTASizeHit CountTotal NormTotal
No Reads
droRho1
AATTCTCG-------------A--------TAACG--ATT------TCT--ATTATAAATCGAGCGGCGAAAAACATACAAGAAGGCATA-------------------------TTTACA---------TTCAGTT---GTTTAGCTGAGTAACGGGTATCTAATAGTCGAGGGACTCGTC-------------------TATCGCGTTCTCTCTTGT-------------TTTC---TTTATTTTTGTATTATTTA-----AC----------TG-TA-----------T-------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTCAATGCTCAACAGAATA-----ATTGSizeHit CountTotal NormTotal
No Reads
droFic1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTTGGCATT---GTAATTAATGTGTTGTTTG-----GTTTGGT-----TC-CA-----------TTCTATTTTCTGCCC-A----------------------------------------------CGATGTGGCTGTGCCTGT----GAAT-GTGCCCC----CGTCTAATTGGTGC-TTC--CACTAATTAC--AGATCCGACGATACAACGTATGCGTCCCGCGGCCGACGGACAGTGTGCTCCGSizeHit CountTotal NormTotal
No Reads
droKik1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTTGCCATT---GTAATTAATGTTTTGTTTG-----GTCGCGTCGCCTCCCAT-----------TTCTATTTTCTGCCCCA----------------------------------------------TGATGTTCT-C---TTTTGT-TTTTTTCTGCCTTTCCCTAACTAATTGCCGC-CTC--CACTAATTAC--AGATCCAACGATACCAC------------TAGCAGCAGCACAG-GTGG--TGSizeHit CountTotal NormTotal
No Reads
droAna3
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTCGCCATT---GTAATTAATGTTTTGTTTG-----GACGCAG-----G-CAG-----------TTCTATTTTCTGCTCCATCCACACCACAGAGTGCCACACAGAGTT--------------------------------CCAAGT-TGAGTCCAGCCTT----TAACTAATTGGTGCCTTT--CACTAATTAC--AGATTCGACGATA---CGTTTACGAGCCGGGGCCGAAGGACTGTCTGCACCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCATTCGCCATT---GTAATTAATGTTTTGTTTG-----GACGC-------G-CAG-----------TTCTATTTTCAACC--ATCC-------AGAGTG--ACCCGGAGT---------------------------------CCGAGTCCGAGTCCTGCCTT----TAACTAATTGGTGCCTTT--CACTAATTAC--AGATTCGACGATA---CGTTTACGAGCCGCGGCCGGAGGACAGTGTGCTCCGSizeHit CountTotal NormTotal
No Reads
dp5
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCTTTTGCCATT---GTAATTAATGCTTTGTTTG-----GTTGC--C------C-T-----------TTCTA---------C-A------T-------------ATCTAAATTTGTTCATCTATTTTTGT--------------------------------------------TGTGGTGC-TTC--CACTAATTAC--AGATTCGACGATA---CGTATGCAGCCCGTGGACGGCTAACAATTTGCTCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................AATTAATGCTTTGTTTG-----GTTG.................................................................................................................................................................................................................2112.0020200000000
droPer2
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGCTTTTGCCATT---GTAATTAATGCTTTGTTTG-----GTTGC--C------C-T-----------TTCTA---------C-A------T-------------ATCTAAATTTGTTCATCTATTTTTGT--------------------------------------------TGTGGTGC-TTC--CACTAATTAC--AGATTCGACGATA---CGTATGCAGCCCGTGGACGGCTAACAATTTGCTCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTACATTTGGCATTGTTGTAATTAATGTTTTGTTTG------------------------------------------------------------------------------------------------------------------------------------------TACTTGGTTACTTCCCAACTAATTAC--AGATTCGGCGATA---CGTATGCGCCCCGTGGGCGTCAAACCATTTGCTCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCGATA---CGTATGCGCCCCGTGGGC..................2711.00100100
droVir3
TTGTAATT---------------------AATG----TTT------TCG---------------------------------------------------------------GCCGCCCCT-----------------------------------------------------------------------------------------------CGC-------------CCC-----------------------------------------------------------------------------------------------------------------TTTTAT--------------------------------------------G-----GC-CGT--GCCTAATTAC--AGATTCGGCGATA---CGTATGCGCCCCGTGGCCGGCAAACGATTTGCTCGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA---CGTATGCGCCCCGTGGCCGGC...............2411.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTAATGTTTACATCA-----GC----------CC-CA-----------GTCGCTAACCCG--------------------------------------------------------------------------------------------------------CTT--GCCTAATTAC--AGATCGGGCATTA---CGTATGCGCCCCGTGGCCGGCAAACAATTTGCTCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/17/2015 at 10:38 PM