ID:

dse_746

 Coordinate:

scaffold_10:1462499-1462649 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.3 -28.1 -27.5 -27.4

Flybase annnotation

CDS [Dsec\GM19166-cds]; exon [dsec_GLEANR_20754:1]; intron [Dsec\GM19166-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

--------------------------########################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AACGAAGAGAGCAGAACCGTGGACAAATGACACTCTGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCAAAAAGGTATGCAGTAGCCAGAAAAGCACGGAACCCAATATACATATGCACACATCTGCAGCCGTGTGTGTGTGTGTGTGTGTATGTGTCGTGGTATATCGCGTATCGCAATCATGCGAATAAAAGGAAAGCGACGAAAGTCAATAGATTTTATAGGTATTGTATCCCGAAATAGGAGCA
****************************************************************************....((..............((((........((((((((((((((((((..(((....)))))))))))))))))))))))))))***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V115
head
 M054
female body
 V114
embryo
 V113
male body
...................................................................................................................................................................................................AGGACTGCGACGTAAGTCA..................................... 19 3 8 2.13 17 5 12 0 0
.............................................................................................................................................TGTGTGTGTGTGTATGTGTCG......................................................................................... 21 0 1 2.00 2 1 0 1 0
...................................................................................................................................................................................................AGGACTGCGACGTAAGTCAA.................................... 20 3 5 1.20 6 0 6 0 0
............................................................................................................................................................................................GTATATAAGGAAAGCGATGAAAG........................................ 23 3 1 1.00 1 1 0 0 0
..........................................................................................AGAAAAGAACAGAACCCAATATACA........................................................................................................................................ 25 2 1 1.00 1 0 1 0 0
............................................................................GGTATGCAGTAGCCAGAAAAG.......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.........................................................................................................................CGCATCTGCAGCCGTGTGTGT............................................................................................................. 21 1 1 1.00 1 1 0 0 0
.....................GACAAATGACACTCTGCCG................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1
..................................................................................................................................................................TTGTATATCGCGTATCGCAAT.................................................................... 21 1 1 1.00 1 0 1 0 0
...................................................................................................................TATGCACACATCTGCAGCCGTGTG................................................................................................................ 24 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................AGGACTGCGACGTAAGTC...................................... 18 3 20 0.95 19 2 17 0 0
........................................................................AAAAGGTATGCGTTAGCC................................................................................................................................................................. 18 2 4 0.50 2 0 0 2 0
..................................................................................................................................................................................................GAGGACAGCGACGTAAGTCA..................................... 20 3 3 0.33 1 0 1 0 0
...............................................................................................................................................TGTGTGTGTGTATGTGTCGTA....................................................................................... 21 1 3 0.33 1 1 0 0 0
........................................................................................................................................GTGTGTGTGTGTGTGTGTATGTGT........................................................................................... 24 0 17 0.06 1 0 0 0 1
..........................................................................................................................................................................CGCATATCGCAGTCATGCT.............................................................. 19 3 18 0.06 1 1 0 0 0
........................................................................................................................................GTGTGTGTGTGTGTGTGTATG.............................................................................................. 21 0 20 0.05 1 0 0 1 0
...........................................................................................................................................TGTGTGTGTGTGTGTATGTG............................................................................................ 20 0 20 0.05 1 0 0 1 0
.ACGAACAGAGCACAACCCT....................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

TTGCTTCTCTCGTCTTGGCACCTGTTTACTGTGAGACGGCTATGTCGCTTCATTTTTAGTTATTAATCTCGTTTTTCCATACGTCATCGGTCTTTTCGTGCCTTGGGTTATATGTATACGTGTGTAGACGTCGGCACACACACACACACACACATACACAGCACCATATAGCGCATAGCGTTAGTACGCTTATTTTCCTTTCGCTGCTTTCAGTTATCTAAAATATCCATAACATAGGGCTTTATCCTCGT
*****************************************************************************************....((..............((((........((((((((((((((((((..(((....)))))))))))))))))))))))))))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V115
head
 M054
female body
 V114
embryo
................................................................................................CGTGCCTTGGGTTATATGTGT...................................................................................................................................... 21 1 1 1.00 1 1 0 0
TTGCTTCTCTCGTCTTGGCAC...................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
.........................................................................................................................................................................................ACGCTTATTATCCTTTCGCTG............................................. 21 1 1 1.00 1 0 1 0
.............................................................................................................................................................ACAGCAACATATAGCGCAT........................................................................... 19 1 1 1.00 1 0 0 1
......................................................................................................................CGTGTGTAGGCGTCGGCACGC................................................................................................................ 21 2 2 0.50 1 1 0 0
....TTCGCTCGTCATGGCACTTG................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0
............................................TCGCTTCATTTTCAGTTCTTG.......................................................................................................................................................................................... 21 3 8 0.13 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_10:1462449-1462699 + dse_746 AACGAAGAGAGCAG-A-----ACCGTG-GACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GCA-------------CGGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------TATGCACACAT-CTGCAG--CCGTGTGTG-TGTGTGTGT--------------------GTGTAT-GTGTCGTGGTATATCGCGTATCGCAA-TCATGCGAA----------TAAA-AGGAAAGC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTATCCCG-A---AATAGGAGCA
droSim2 x:1525608-1525850 + AACGAAGAGAGCAG-A-----ACCGTG-GACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AGA----------------GCA-------------CGGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------TATGCACACAT-CTGCAG--CCGTGTGTG-TGTGTA----------------------------T-GTGTTGTTGTATATCGCGTATCGCAA-TCATGCAAA----------TAAA-AGGCAAGC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTATCCCG-A---AATAGGAGCA
dm3 chrX:1668179-1668429 + AACGAAGAGAGCAG-A-----ACCGTT-AACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GAA-------------CAGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------TGTGCACACAT-CTGCAG--CCGTGTGTG-TGTGTGTGT--------------------GTGTAT-GTGTCGTTGTATATCGCGTATCGCAT-TCATGCAAA----------TAAA-AGGCAAGC----GACGGAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTGTCCCG-A---AATAGGAGCA
droEre2 scaffold_4644:1645168-1645411 + AACGCAGTGAGCAG-A-----ACCGTTAAACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GAA-------------CGGAACCCAACGG--------------------------TACAT------------ATA----------------CGCGCTC---------------------------------------------------------------------ATGCACACAT-CTGCAG--CTGTGT-------------------------------------AT-GTGCCGTTG----TCGCGTATCGCAT-TAATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTGTCCCG-A---AATAGGAGCG
droYak3 X:1513387-1513643 + AACGAAGAAAGCAG-A-----ACCGTTAAACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GAA-------------CGGAACCCAACGG--------------------------TACAT------------ATA----------------CGCGCTC---------------------------------------------------------------------ATGCACACAT-CTGCAG--CCGTGTGTG-TGTGTGTGT--------------------ATGTG--------TTGTATATCGCGTATCGCAT-TCATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTGTCCCG-A---AATAGGAGCA
droEug1 scf7180000408994:396037-396411 + AGCCAAGAGAACG---------TTGTTGAAGAAGTGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTTTCACAA-GCA-------------AAAAAGGTATGCAGTA--GCCAACAGAACA----------------GAA-------------CAGAACAGAACGG-AGACCGAGACCATCAC-----------------ATCGTACATACA-ATGTGCATACATATATACGTACGTACGTACATACATACATAGATATATATAT----ATA-------------------------------TGTGCA-------GGCAG--TCGTATGTA-TGTATGTAT--------------------GTATTT-GTGTCGTTGTAAATCGGG-----CAT-TTATGCAAAATACTCGTAATATATAGGCAAAA----GATACAAAACA-TAGGTGGATCTCC--TTATAGT---A-G--------------GTAAAACAT-----ATTCCAGATA----TGTTGTTC-GATCTTAATGTTATCT
droBia1 scf7180000301760:4257639-4257925 + AGAGAAGAG--CAG-C-AGCTATCGCTAAACAAATGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CCCAA-GC---------------AAAAGGTATGCAGTA--GCCAG-A--AAACCGAAAACAGAAAACCGAA-------------AAGAACACAAA-------------------------------------------GTAT-----------------CAT--------------------------------------GCACACACACGCAGCT-------------------------ACAT-GTGCAG--CCGTGTGTG-TGTGTGTGT--------------------GTGTG-----------TGCAAGGGG-----CAT-T--TGCAAA----------TAAA-AGGCGAAAAATAGACAAAAGTCAATAG---------GTGTT------ACAGG--------------GTAGCGCGTCGAAT----------------GTGTTC-G-----AACGGGAGCA
droTak1 scf7180000415704:1261034-1261299 + AAGAGGAAGAACAC-T-AACTAGCGTTAAACAAATCAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CGCTA-GCG-------------AAAAAGGTATGCAGTAGAGCCAA-A--AAA----------------ACA-------------CAGAACGCAAC-----------------------------A----------------TACA------------TACA---------------------------------------------------------------------------TCTGTACAT-GTGCAG--CCGTGTAGGGTATGT----------------------------AT-GTGTGGTTGTATATCGGG-----CATTTTATGCAAA----------TCTA-AGGCAAAA----GATACAGG----------------------------------------------GTATC-CGTCAGATAT--CAGATAGTTGTGATGTTCTA-T---ATTAGATG--
droEle1 scf7180000491043:251349-251502 + G---TAGGATGCAG-A-----ACCACT-AACAAATGACACTCTTTGCCGATATAGCTTAGTAAAAATCAATAATTAGAGCTCGTT--CCCAA-GCA-------------AAAAAGGTATGCAGTA--GCCAG-AGAACA----------------GAA------------------CAAATCGG--------------------------CACACAAAA----ACA-------------------------------------------------------------------------------------------------------------------CAGTGTGTG-CATGTATGT--------------------GCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779976:69268-69572 - G----------CAG-A-----ACCGTT-AACAAATGTCCCTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CTCAA-GCA-------------AAAAAGGTATGCAGTA--GCCAG-A--ACA----------------GAA-------------TAAA-----TCGG--------------------------CACACAAA-----ACACAC---------------------------------------------AGCGTGCATGTATGT------------------GCGCGCACCACACACATACACATACCATGCAG--CCGTGTATG-TACATATGT------------------------AT-GTGTCGCTGAATATTGGG-----CAT-TTATGCAAA----------TAAA-AGGCAAAA----GATAAAAGTCGAAAG-AGGTTTCGATTTT--AGTTAAAGGTATTCAAAGCAAGGGCATC-C-TCGGATG------------------------------CGGATGCG
droFic1 scf7180000453253:107595-107813 + GA----------------------------CAAATGAAAC----TGCCGATACATCGAAGTAAAAATCAATAATTAGAGCTCTTT--CACA--GC--------------AAAAAGGTATGCAGTA--GCCAA-A--ACA----------------GAA-------------TAAA--TCATCGG--------------------------TACACAAA-----ACACGC----------------------C----------------------A-------------------------------------------------------GT-GTGCAG--CCGTGCGTG-TGTATGTAT-------------------------------TGCTGTGTGTTGGA-----CAT-TTATGCAAA----------TAAA-A-----------------AGTCGATAA-AGGTTTCGATTTT------GGC-GTTTG----------------------------------------GTATCC-T-A---AATAAGAGCA
droKik1 scf7180000302398:409792-410039 - AATGACAAAAAAAAAA-----AC----------------AAC--TACCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CCCAAAGCAAAAGCAAACGCAAAAAAAGGTATGCAGTA--GCAAAAAGAACA----------------AAACCATTGGCACAACCAAAAACCAAC-----------------------------A----------------CACA------------CACACACTC--------------ACACTAGAGTATGCATGTGTGT--------GCACAT-------------------------ACAT-ACGAAG--CCAA------------A------GTGTATCT--------ATGTATTTTATCTTTGTATTTTGGG-----CAT-TAATGCAAA----------TAAA-AGG--------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:4551888-4551950 + AGCAACAAAAGTACAAAA---ACTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------AGT------------T-------------------GCA---------TGCCCCATTGTGTGTG-TGTGTGTGT----------------------GTGT-GTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396567:767768-767801 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAT--CTGTGTGTG-TGTGTAGGT--------------------GTGAGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group3:8270859-8270974 + G------------------------------------------------------CAAACCAAAAACCAAAAACCAAAAA-----------------------------AAAAAGA--------------------------------------------------------------------GAAAACCAAACAATAAC-----------------AAAATACGTTT-----------------CGT--------------------------------------GTT------------C-------------------GCGCG-------CGCGT--CTGTGTGTG-TGTGTGTGT--------------------GTGTGC-TTGGCGTTGTGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:9720088-9720206 + G------------------------------------------------------CAAACCAAAAACCAAAAACCAAAAA-----------------------------AAAAGA---------------------------------------------------------------------GAAAACCAAACAATAAC-----------------AAAATACGTTT-----------------CGT--------------------------------------GTT------------C-------------------GCGCG-------CGCGT--CTGTGTGTG-TGTGTGTGTGTGT----------------GTGTGC-TTGGCGTTGTGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004921:2014552-2014592 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAACAC-TTGAG----TGTGTGTG-TGTGTGTGT--------------------GTGAGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:7874139-7874265 + TGCAGCGAG--------------------------------------------------CCAAGCGCCAAAAAGCAGGCA-----------------------------ATA------------------------------------------------------------------------GAAAATATTACAGTGGCAGCAGC-----------------------------------------------------------------------TGCACATGTGT--------GAGTATATGTACGAGC---------ATTTCTCTGT-CTGCAT--GCGTGTGTG-TGTGTGTGT--------------------GTGTGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:15416655-15416775 - CA----------------------------------------------------AAGAAATGCAGCTCACTAATTACAAC-----------------------------AACAAGA---------------------AC----------------AAA-------------CAGGGCCGACAAG-CACGCGT-----TCCCAGCCACTGGGCCAT------------ATCCT-----------------------------------------------------------------------------------------TGTG--------CTGCAT--GCGTGTGTG-TGTGTGTGT--------------------GTGTGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14978:317035-317110 + AGTACTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGT-----------------------------------------------------------------------------------------------------------GT------------------------------------------------GT--GTATGTGTA-TGTGTGTGCGTGTGTGTGTCTGTGTTTGTGTATAT-GTGTAATT--ATATTGC---------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AACGAAGAGAGCAG-A-----ACCGTG-GACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GCA-------------CGGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------TATGCACACAT-CTGCAG--CCGTGTGTG-TGTGTGTGT--------------------GTGTAT-GTGTCGTGGTATATCGCGTATCGCAA-TCATGCGAA----------TAAA-AGGAAAGC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTATCCCG-A---AATAGGAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................TGTGTGTGT--------------------GTGTAT-GTGTCG....................................................................................................................................................................2112.0020011
..................................................................................................................GGTATGCAGTA--GCCAG-A--AAA----------------G.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................GACAAATGACACTC--TGCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.................................................................................................................................................................................................................................................................................................................................TATGCACACAT-CTGCAG--CCGTGTG.................................................................................................................................................................................................................2411.0010001
.................................................................................................................................................................................................................................................................................................................................................................TGTGTGT--------------------GTGTAT-GTGTCGTA..................................................................................................................................................................2130.3310001
.........................................................................................................................................................................................................................................................................................................................................................GTGTG-TGTGTGTGT--------------------GTGTAT-GTGT......................................................................................................................................................................24170.0610100
.........................................................................................................................................................................................................................................................................................................................................................GTGTG-TGTGTGTGT--------------------GTGTAT-G.........................................................................................................................................................................21200.0510010
............................................................................................................................................................................................................................................................................................................................................................TG-TGTGTGTGT--------------------GTGTAT-GTG.......................................................................................................................................................................20200.0510010
droSim2
AACGAAGAGAGCAG-A-----ACCGTG-GACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AGA----------------GCA-------------CGGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------TATGCACACAT-CTGCAG--CCGTGTGTG-TGTGTA----------------------------T-GTGTTGTTGTATATCGCGTATCGCAA-TCATGCAAA----------TAAA-AGGCAAGC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTATCCCG-A---AATAGGAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........AGCAG-A-----ACCGTG-GACAAATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
.......................CGTG-GACAAATGACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000010000000
....................................................................................................................................................................................................................................TACA-----------------------------------------------------------------------------------------TATGCACACAT-CTGCAG--........................................................................................................................................................................................................................2111.00100000000010000000
........GAGCAG-A-----ACCGTG-GACAAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.................................................................................................................................CAG-A--AGA----------------GCA-------------CGGAACCCAAT-----------------------------..........................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------ATTTT------ATAGGTATT----------------------------------------GT.....................1811.00100000100000000000
.........................TG-GACAAATGACACTC--TGCCGATACAGCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
........................................TC--TGCCGATACAGCGAAGTAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000000010000
dm3
AACGAAGAGAGCAG-A-----ACCGTT-AACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GAA-------------CAGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------TGTGCACACAT-CTGCAG--CCGTGTGTG-TGTGTGTGT--------------------GTGTAT-GTGTCGTTGTATATCGCGTATCGCAT-TCATGCAAA----------TAAA-AGGCAAGC----GACGGAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTGTCCCG-A---AATAGGAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................ACACTC--TGCCGATACAGCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AG-A--AAA----------------GAA-------------CAGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------............................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AT-CTGCAG--CCGTGTGTG-TGTGT.........................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGTGTGTGT--------------------GTGTAT-GTGTCG....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................GACACTC--TGCCGATACAGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGACACTC--TGCCGATACAGCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AAATGACACTC--TGCCGATACAGCGAAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AACAAATGACACTC--TGCCGATACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGTT-AACAAATGACACTC--TGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TCAATAATTAGAGC-----------------------------AAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................CACTC--TGCCGATACAGCGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CACTC--TGCCGATACAGCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GTAT-GTGTCGTTGTATATCGCG........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................T--------------------GTGTAT-GTGTCGTTGTATATC...........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GAGAGCAG-A-----ACCGTT-AACAAATGACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................TGCAGTA--GCCAG-A--AAA----------------GA................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TC--TGCCGATACAGCGAAGTAAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................AA-------------CAGAACCCAAT-----------------------------A----------------TACA-----------------------------------------------------------------------------------------TGT.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................C--TGCCGATACAGCGAAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACTC--TGCCGATACAGCGAAGTAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CACAT-CTGCAG--CCGTGTGTG-TGTGTG........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................CGATACAGCGAAGTAAAAATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....AAGAGAGCAG-A-----ACCGTT-AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GACACTC--TGCCGATACAGCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GAGC-----------------------------AAAAAGGTATGCAGTA--..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ATACAGCGAAGTAAAAATCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AT-CTGCAG--CCGTGTGTG-TGTGTG........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACACTC--TGCCGATACAGCGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTGTATATCGCGTATCGCAT-TC.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCATGCAAA----------TAAA-AGGCAAGC----GA.........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................T-CTGCAG--CCGTGTGTG-TGTGT.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................GACACTC--TGCCGATACAGCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT----------------------------------------GTGTCCCG-A---AATAGGAG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................T-CTGCAG--CCGTGTGTG-TGTGTG........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AATGACACTC--TGCCGATACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAA----------TAAA-AGGCAAGC----GACGGAAG...................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GTGTGT--------------------GTGTAT-GTGTCGTTGT................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGT--------------------GTGTAT-GTGTCGTTG.................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TG-TGTGTGTGT--------------------GTGTAT-GTGT......................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................G--CCGTGTGTG-TGTGTGTGT--------------------G................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................AG--CCGTGTGTG-TGTGTGTGT--------------------.................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGTGTG-TGTGTGTGT--------------------GTGTA............................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TG-TGTGTGTGT--------------------GTGTAT-GTG.......................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000
..........................................................................................................................................................................................................................................................................................................................................................TGTG-TGTGTGTGT--------------------GTGTA............................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................G--CCGTGTGTG-TGTGTGTGT--------------------GTG..............................................................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................G--CCGTGTGTG-TGTGTGTGT--------------------GT...............................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CGTGTGTG-TGTGTGTGT--------------------GTGTAT-..........................................................................................................................................................................23160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTG-TGTGTGTGT--------------------GTGTAT-G.........................................................................................................................................................................19200.0510000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................G-TGTGTGTGT--------------------GTGTAT-GTGT......................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGTGTGTGT--------------------GTGTAT-GTG.......................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CCGTGTGTG-TGTGTGTGT--------------------GT...............................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTG-TGTGTGTGT--------------------GTGTAT-GTGT......................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droEre2
AACGCAGTGAGCAG-A-----ACCGTTAAACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GAA-------------CGGAACCCAACGG--------------------------TACAT------------ATA----------------CGCGCTC---------------------------------------------------------------------ATGCACACAT-CTGCAG--CTGTGT-------------------------------------AT-GTGCCGTTG----TCGCGTATCGCAT-TAATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTGTCCCG-A---AATAGGAGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................G--------------------------TACAT------------ATA----------------CGCGCTC---------------------------------------------------------------------ATGCAC.....................................................................................................................................................................................................................................2211.0011000000
...............................................................................................................................................................................ACCCAACGG--------------------------TACAT------------ATA----------------CGCGC..................................................................................................................................................................................................................................................................................................................2211.0010000010
...............................................................................................................................................................................................................................................................................................................................................GCAG--CTGTGT-------------------------------------AT-GTGCCGTTG----TC...........................................................................................................................................................2311.0010100000
droYak3
AACGAAGAAAGCAG-A-----ACCGTTAAACAAATGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAG-A--AAA----------------GAA-------------CGGAACCCAACGG--------------------------TACAT------------ATA----------------CGCGCTC---------------------------------------------------------------------ATGCACACAT-CTGCAG--CCGTGTGTG-TGTGTGTGT--------------------ATGTG--------TTGTATATCGCGTATCGCAT-TCATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTT------ATAGGTATT----------------------------------------GTGTCCCG-A---AATAGGAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------ATTTT------ATAGGTATT----------------------------------------GTGTCC.................2111.00101000000000
droEug1
AGCCAAGAGAACG---------TTGTTGAAGAAGTGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTTTCACAA-GCA-------------AAAAAGGTATGCAGTA--GCCAACAGAACA----------------GAA-------------CAGAACAGAACGG-AGACCGAGACCATCAC-----------------ATCGTACATACA-ATGTGCATACATATATACGTACGTACGTACATACATACATAGATATATATAT----ATA-------------------------------TGTGCA-------GGCAG--TCGTATGTA-TGTATGTAT--------------------GTATTT-GTGTCGTTGTAAATCGGG-----CAT-TTATGCAAAATACTCGTAATATATAGGCAAAA----GATACAAAACA-TAGGTGGATCTCC--TTATAGT---A-G--------------GTAAAACAT-----ATTCCAGATA----TGTTGTTC-GATCTTAATGTTATCTSizeHit CountTotal NormTotal
No Reads
droBia1
AGAGAAGAG--CAG-C-AGCTATCGCTAAACAAATGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CCCAA-GC---------------AAAAGGTATGCAGTA--GCCAG-A--AAACCGAAAACAGAAAACCGAA-------------AAGAACACAAA-------------------------------------------GTAT-----------------CAT--------------------------------------GCACACACACGCAGCT-------------------------ACAT-GTGCAG--CCGTGTGTG-TGTGTGTGT--------------------GTGTG-----------TGCAAGGGG-----CAT-T--TGCAAA----------TAAA-AGGCGAAAAATAGACAAAAGTCAATAG---------GTGTT------ACAGG--------------GTAGCGCGTCGAAT----------------GTGTTC-G-----AACGGGAGCASizeHit CountTotal NormTotal
No Reads
droTak1
AAGAGGAAGAACAC-T-AACTAGCGTTAAACAAATCAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CGCTA-GCG-------------AAAAAGGTATGCAGTAGAGCCAA-A--AAA----------------ACA-------------CAGAACGCAAC-----------------------------A----------------TACA------------TACA---------------------------------------------------------------------------TCTGTACAT-GTGCAG--CCGTGTAGGGTATGT----------------------------AT-GTGTGGTTGTATATCGGG-----CATTTTATGCAAA----------TCTA-AGGCAAAA----GATACAGG----------------------------------------------GTATC-CGTCAGATAT--CAGATAGTTGTGATGTTCTA-T---ATTAGATG--SizeHit CountTotal NormTotal
No Reads
droEle1
G---TAGGATGCAG-A-----ACCACT-AACAAATGACACTCTTTGCCGATATAGCTTAGTAAAAATCAATAATTAGAGCTCGTT--CCCAA-GCA-------------AAAAAGGTATGCAGTA--GCCAG-AGAACA----------------GAA------------------CAAATCGG--------------------------CACACAAAA----ACA-------------------------------------------------------------------------------------------------------------------CAGTGTGTG-CATGTATGT--------------------GCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
G----------CAG-A-----ACCGTT-AACAAATGTCCCTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CTCAA-GCA-------------AAAAAGGTATGCAGTA--GCCAG-A--ACA----------------GAA-------------TAAA-----TCGG--------------------------CACACAAA-----ACACAC---------------------------------------------AGCGTGCATGTATGT------------------GCGCGCACCACACACATACACATACCATGCAG--CCGTGTATG-TACATATGT------------------------AT-GTGTCGCTGAATATTGGG-----CAT-TTATGCAAA----------TAAA-AGGCAAAA----GATAAAAGTCGAAAG-AGGTTTCGATTTT--AGTTAAAGGTATTCAAAGCAAGGGCATC-C-TCGGATG------------------------------CGGATGCGSizeHit CountTotal NormTotal
No Reads
droFic1
GA----------------------------CAAATGAAAC----TGCCGATACATCGAAGTAAAAATCAATAATTAGAGCTCTTT--CACA--GC--------------AAAAAGGTATGCAGTA--GCCAA-A--ACA----------------GAA-------------TAAA--TCATCGG--------------------------TACACAAA-----ACACGC----------------------C----------------------A-------------------------------------------------------GT-GTGCAG--CCGTGCGTG-TGTATGTAT-------------------------------TGCTGTGTGTTGGA-----CAT-TTATGCAAA----------TAAA-A-----------------AGTCGATAA-AGGTTTCGATTTT------GGC-GTTTG----------------------------------------GTATCC-T-A---AATAAGAGCASizeHit CountTotal NormTotal
No Reads
droKik1
AATGACAAAAAAAAAA-----AC----------------AAC--TACCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTT--CCCAAAGCAAAAGCAAACGCAAAAAAAGGTATGCAGTA--GCAAAAAGAACA----------------AAACCATTGGCACAACCAAAAACCAAC-----------------------------A----------------CACA------------CACACACTC--------------ACACTAGAGTATGCATGTGTGT--------GCACAT-------------------------ACAT-ACGAAG--CCAA------------A------GTGTATCT--------ATGTATTTTATCTTTGTATTTTGGG-----CAT-TAATGCAAA----------TAAA-AGG--------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AGCAACAAAAGTACAAAA---ACTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------AGT------------T-------------------GCA---------TGCCCCATTGTGTGTG-TGTGTGTGT----------------------GTGT-GTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................ATTGTGTGTG-TGTGTGTGT----------------------GTGT-G.........................................................................................................................................................................2480.131000001
droBip1
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAT--CTGTGTGTG-TGTGTAGGT--------------------GTGAGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
G------------------------------------------------------CAAACCAAAAACCAAAAACCAAAAA-----------------------------AAAAAGA--------------------------------------------------------------------GAAAACCAAACAATAAC-----------------AAAATACGTTT-----------------CGT--------------------------------------GTT------------C-------------------GCGCG-------CGCGT--CTGTGTGTG-TGTGTGTGT--------------------GTGTGC-TTGGCGTTGTGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................TGTGTGTGT--------------------GTGTGC-TTGG......................................................................................................................................................................19200.1530300000000
..........................................................................................................................................................................................................................................................................................................................................................TGTG-TGTGTGTGT--------------------GTGTGC-TTG.......................................................................................................................................................................22200.1020200000000
......................................................................................................................................................................................................................................................................................................................................................TGTGTGTG-TGTGTGTGT--------------------GTGTG............................................................................................................................................................................22200.1020200000000
droPer2
G------------------------------------------------------CAAACCAAAAACCAAAAACCAAAAA-----------------------------AAAAGA---------------------------------------------------------------------GAAAACCAAACAATAAC-----------------AAAATACGTTT-----------------CGT--------------------------------------GTT------------C-------------------GCGCG-------CGCGT--CTGTGTGTG-TGTGTGTGTGTGT----------------GTGTGC-TTGGCGTTGTGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................GTGTGTGT----------------GTGTGC-TTGG......................................................................................................................................................................18200.102000110
droWil2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAACAC-TTGAG----TGTGTGTG-TGTGTGTGT--------------------GTGAGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................GAG----TGTGTGTG-TGTGTGTGT--------------------GTGAG............................................................................................................................................................................25200.15300003
........................................................................................................................................................................................................................................................................................................................................................TGTGTG-TGTGTGTGT--------------------GTGAGT-GTG.......................................................................................................................................................................24200.05101000
droVir3
TGCAGCGAG--------------------------------------------------CCAAGCGCCAAAAAGCAGGCA-----------------------------ATA------------------------------------------------------------------------GAAAATATTACAGTGGCAGCAGC-----------------------------------------------------------------------TGCACATGTGT--------GAGTATATGTACGAGC---------ATTTCTCTGT-CTGCAT--GCGTGTGTG-TGTGTGTGT--------------------GTGTGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................TGCAT--GCGTGTGTG-TGTGTGTGT--------------------G................................................................................................................................................................................24200.051000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GCAT--GCGTGTGTG-TGTGTGTG......................................................................................................................................................................................................21200.051000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCGTGTGTG-TGTGTGTGT--------------------GTGTG............................................................................................................................................................................23200.051000000010000000000000000000000000000000000000000000000000000000
droMoj3
CA----------------------------------------------------AAGAAATGCAGCTCACTAATTACAAC-----------------------------AACAAGA---------------------AC----------------AAA-------------CAGGGCCGACAAG-CACGCGT-----TCCCAGCCACTGGGCCAT------------ATCCT-----------------------------------------------------------------------------------------TGTG--------CTGCAT--GCGTGTGTG-TGTGTGTGT--------------------GTGTGT-GTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGTACTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGT-----------------------------------------------------------------------------------------------------------GT------------------------------------------------GT--GTATGTGTA-TGTGTGTGCGTGTGTGTGTCTGTGTTTGTGTATAT-GTGTAATT--ATATTGC---------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:35 PM