dse_726

CDS [Dsec\GM19932-cds]; CDS [Dsec\GM19932-cds]; exon [dsec_GLEANR_2758:1]; exon [dsec_GLEANR_2758:2]; intron [Dsec\GM19932-in]

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GCGATACCCTTGTTGATGGCCTGCATTTCTTCGATTGCTACCGCAATGCCGTAAGAATAATAAGTCACTAATTTAATTCACTCGAGATCTTTAAAAGATGATCTACCCCTTCAAGCACTAACGATTATAATGAATAGCTCTTTAAAATGATATTTGCCAACACACTGGTCTAGATTTTCATTCGTATGGTTTATTGCTCGATTAGAGCGCATTAAAAAAACGTGCCATTGTCATAAATTCATTCGTATTATCAGACGAGAGCTTAAGTGCTTTATAAAGACTGAGAGTCTATCATTAAGGAAATATAAATAGTAACATGCAATATCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGCCT *******************************************************************************************************************************................(((((.((((((((......))))..))))..)))))...***************************************************************************************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V114 embryo	V115 head	V113 male body
........................ATTTCTTCGATTGCTACCGC..................................................................................................................................................................................................................................................................................................................................................	20	0	1	26.00	26	26	0	0
..........................TTCTTCGATTGCTACCGCA.................................................................................................................................................................................................................................................................................................................................................	19	0	1	7.00	7	7	0	0
........................ATTTCTTCGATTGCTACCGCA.................................................................................................................................................................................................................................................................................................................................................	21	0	1	5.00	5	5	0	0
.........................................................................................................................................................................................................................................................................................................................................................ACAAGGTTATGTTCACCCTGAACAGT...........	26	0	1	4.00	4	4	0	0
.............................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTT.............................	20	0	1	4.00	4	4	0	0
..............................................................................................................................................................................................................................................................................................................................................................GTTATGTTCACCCTGAACAGT...........	21	0	1	4.00	4	4	0	0
........................ATTTCTTCGATTGCTACC....................................................................................................................................................................................................................................................................................................................................................	18	0	1	4.00	4	4	0	0
.........................TTTCTTCGATTGCTACCGCA.................................................................................................................................................................................................................................................................................................................................................	20	0	1	3.00	3	3	0	0
.........................TTTCTTCGATTGCTACCGC..................................................................................................................................................................................................................................................................................................................................................	19	0	1	3.00	3	3	0	0
............................................................................................................................................................................................................................................................................................................................................................................GAACAGTGACTCCAGCCT	18	0	1	3.00	3	3	0	0
....................................................................................................................................................................................................................................................................................................................................................CAGCTACAAGGTTATGTT........................	18	0	1	3.00	3	3	0	0
.......................CATTTCTTCGATTGCTACCGC..................................................................................................................................................................................................................................................................................................................................................	21	0	1	3.00	3	3	0	0
..............................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGGT..............................	18	0	1	3.00	3	3	0	0
.......................................................................................................................................................................................................................................................................................................................................................CTACAAGGTTATGTTCACCCTGAACAGT...........	28	0	1	2.00	2	2	0	0
.................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGGTTAT...........................	18	0	1	2.00	2	2	0	0
........................................................................................................................................................................................................................................................................................................................................................TACAAGGTTATGTTCACCCTGAACAGT...........	27	0	1	2.00	2	2	0	0
.................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGGTTATGTT........................	21	0	1	2.00	2	2	0	0
.......................CATTTCTTCGATTGCTACCGCA.................................................................................................................................................................................................................................................................................................................................................	22	0	1	2.00	2	2	0	0
.................................................................................................................................ATGAATAGCTCTTTAAAATG.........................................................................................................................................................................................................................................	20	0	1	2.00	2	2	0	0
..................................................................................................................................................................................................................................................................................................................................................GACAGCTACAAGGTTATGT.........................	19	0	1	2.00	2	2	0	0
.......................................................................................................................................................................GTCTAGATTTTCATTCGT.....................................................................................................................................................................................................	18	0	1	2.00	2	2	0	0
............................................................................................................................................................................................................................................................................GCTTTATAAAGACTGAGA................................................................................................	18	0	1	1.00	1	1	0	0
..............................................................................CACTCGAGATCTTTAAAAGATGAT........................................................................................................................................................................................................................................................................................	24	0	1	1.00	1	1	0	0
...ATACCCTTGTTGATGGCCTGC......................................................................................................................................................................................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0
..........................................................................................................................................................................................................................................................................................................................................CCTCCTCCGACAGCTACAAGGTT.............................	23	2	1	1.00	1	1	0	0
......................................................................................................................................................................................CGTATGGTTTATTGCTCGATTAGAGC..............................................................................................................................................................................	26	0	1	1.00	1	1	0	0
.................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGGTTATGT.........................	20	0	1	1.00	1	1	0	0
..GATACCCTTGTTGATGGCCTGC......................................................................................................................................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0
...............................................................................................................................................................................................................................................CATTCGTATTATCAGACGAGA..........................................................................................................................	21	0	1	1.00	1	1	0	0
..............................................................................................................................ATAATGAATAGCTCTTTAAAATGAT.......................................................................................................................................................................................................................................	25	0	1	1.00	1	1	0	0
.......................................................................................................................................................................................................................................................TTATCAGACGAGAGCTTAAGTGC................................................................................................................	23	0	1	1.00	1	1	0	0
.............................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTTATGTT........................	25	0	1	1.00	1	1	0	0
.......................CATTTCTTCGATTGCTACCGTA.................................................................................................................................................................................................................................................................................................................................................	22	1	1	1.00	1	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................GGTTATGTTCACCCTGAACAGT...........	22	0	1	1.00	1	1	0	0
.........................................................................................................................................................................................................................................................ATCAGACGAGAGCTTAAGT..................................................................................................................	19	0	1	1.00	1	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................CACCCTGAACAGTGACTCCAGCCT	24	0	1	1.00	1	1	0	0
..............................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGGTT.............................	19	0	1	1.00	1	1	0	0
....................................................................................................................................................................................................................................................GTATTATCAGACGAGAGC........................................................................................................................	18	0	1	1.00	1	1	0	0
...................................................................................................................................................................................ATTCGTATGGTTTATTGCT........................................................................................................................................................................................	19	0	1	1.00	1	1	0	0
.........................................................................................................................................................................................ATGGTTTATTGCTCGATTAGAG...............................................................................................................................................................................	22	0	1	1.00	1	1	0	0
.............................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGT..............................	19	0	1	1.00	1	1	0	0
...........................................................................ATTCACTCGAGATCTTTAAAAGATGAT........................................................................................................................................................................................................................................................................................	27	0	1	1.00	1	1	0	0
............................................................................................................................................................................GATTTTCATTCGTATGGT................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0
...................................................................................................................................................................................................................................................................................................................................................ACAGCTACAAGGTTATGTT........................	19	0	1	1.00	1	1	0	0
........................................CCGCAATGCCGTAAGAAT....................................................................................................................................................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0
..GATACCCTTGTTGATGGC..........................................................................................................................................................................................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0
......................................................................................................................................................................GGTCTAGATTTTCATTCGT.....................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0
.....................................................................................................................................ATAGCTCTTTAAAATGAT.......................................................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0
.............................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTTAT...........................	22	0	1	1.00	1	1	0	0
...............................................................................................................................................................................................................................................CATTCGTATTATCAGACGAGAGC........................................................................................................................	23	0	1	1.00	1	1	0	0
......................................................................................................................................................................................................................................................ATTATCAGACGAGAGCTTAAGTGCT...............................................................................................................	25	0	1	1.00	1	1	0	0
.........................................................................................................................................................................CTAGATTTTCATTCGTATGGTTT..............................................................................................................................................................................................	23	0	1	1.00	1	1	0	0
......................GCATTTCTTCGATTGCTACCGC..................................................................................................................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................TTCACCCTGAACAGTGACTCC.....	21	0	1	1.00	1	1	0	0
............................................................................................................................................................................................GTTTATTGCTCGATTAGAG...............................................................................................................................................................................	19	0	1	1.00	1	1	0	0
.........................ATTCTTCGATTGCTACCGCA.................................................................................................................................................................................................................................................................................................................................................	20	1	1	1.00	1	1	0	0
..............................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGGTTATGTT........................	24	0	1	1.00	1	1	0	0
GCGATACTCTTGTTGATGGCCTGC......................................................................................................................................................................................................................................................................................................................................................................	24	1	1	1.00	1	1	0	0
GCGATACCCTTGTTGATGGCCTGC......................................................................................................................................................................................................................................................................................................................................................................	24	0	1	1.00	1	1	0	0
......................GCATTCCTTCGATTGCTACCGC..................................................................................................................................................................................................................................................................................................................................................	22	1	1	1.00	1	1	0	0
...........................................................................................................................................................................................................................................................................................................................................CTCCTCCGACAGCTACAAGGTT.............................	22	1	1	1.00	1	1	0	0
.............................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTTATGT.........................	24	0	1	1.00	1	1	0	0
......................GCATTTCTTCGATTGCTACCGCAATGC.............................................................................................................................................................................................................................................................................................................................................	27	0	1	1.00	1	0	1	0
.....................................................................................................................................ATAGCTCTTTAAAATGATATTT...................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0
.....................................CTACCGCAATGCCGTAAGA......................................................................................................................................................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0
....................CTGCATTTCTTCGATTGCTACCGCA.................................................................................................................................................................................................................................................................................................................................................	25	0	1	1.00	1	1	0	0
.........................................................................................................................................................................................................................................................ATCAGACGAGAGCTTAAGTGCT...............................................................................................................	22	0	1	1.00	1	0	0	1
..................................................................................................................................................................................................................................................................................................................................................GACAGCTACAAGGTTATGTT........................	20	0	1	1.00	1	1	0	0
.....................................................................................................................CTAACGATTATAATGAATAGCT...................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................CACCCTGAACAGTGACTCC.....	19	0	1	1.00	1	1	0	0
GCGATACCCTTGTTGATGGCCT........................................................................................................................................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0
......................................................................................................................................................................................CGTACGGTTTAATCCTCGA.....................................................................................................................................................................................	19	3	3	0.33	1	1	0	0
......................................................................................................................................................................................CGTATGGTTTAATCTTCGA.....................................................................................................................................................................................	19	3	17	0.06	1	1	0	0
..................................................................................................................................................................................................................................................TGGTATTATGAGAGGAGAG.........................................................................................................................	19	3	20	0.05	1	0	1	0

CGCTATGGGAACAACTACCGGACGTAAAGAAGCTAACGATGGCGTTACGGCATTCTTATTATTCAGTGATTAAATTAAGTGAGCTCTAGAAATTTTCTACTAGATGGGGAAGTTCGTGATTGCTAATATTACTTATCGAGAAATTTTACTATAAACGGTTGTGTGACCAGATCTAAAAGTAAGCATACCAAATAACGAGCTAATCTCGCGTAATTTTTTTGCACGGTAACAGTATTTAAGTAAGCATAATAGTCTGCTCTCGAATTCACGAAATATTTCTGACTCTCAGATAGTAATTCCTTTATATTTATCATTGTACGTTATAGAAAATCAGGAGGCTGTCGATGTTCCAATACAAGTGGGACTTGTCACTGAGGTCGGA ***************************************************************************************************************************************************************************************************................(((((.((((((((......))))..))))..)))))...*******************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V114 embryo	V113 male body	V115 head	M054 female body
........................................................................................................................................CGAGGAGTTTTACTATAAAC..................................................................................................................................................................................................................................	20	2	2	5.00	10	10	0	0	0
......................................................................................................................................ACCGAGGAGTTTTACTATAAAC..................................................................................................................................................................................................................................	22	3	2	3.50	7	3	3	1	0
........................................................................................................................................CGAGGAGTTTTACTATAA....................................................................................................................................................................................................................................	18	2	14	1.93	27	24	0	2	1
........................................................................................................................................CGAGGAGTTTTACTATAAACAG................................................................................................................................................................................................................................	22	3	3	1.33	4	1	2	1	0
......................................................................................................................................ATCGAGGAGTTTTACTATAAA...................................................................................................................................................................................................................................	21	2	1	1.00	1	1	0	0	0
........................................................................................................................................CGAGGAGTTTTACTATAAA...................................................................................................................................................................................................................................	19	2	9	1.00	9	9	0	0	0
.........................................................................................................................................GAGGAGTTTTACTATAAAC..................................................................................................................................................................................................................................	19	2	3	1.00	3	2	1	0	0
.......................................................................................................................................CCGAGGAGTTTTACTATAAAC..................................................................................................................................................................................................................................	21	3	8	0.75	6	3	1	1	1
........................................................................................................................................CGAGGAGTTTTACTATAAACA.................................................................................................................................................................................................................................	21	3	9	0.33	3	3	0	0	0
.........................................................................................................................................GAGGAGTTTTACTATAAA...................................................................................................................................................................................................................................	18	2	16	0.25	4	3	0	1	0
...........................................................................................................................................................................................................................................................................................................................GTGCGTTATAGAAAATTA.................................................	18	2	12	0.17	2	0	0	2	0

Species	Coordinate	ID	Alignment
droSec2	scaffold_1:11431525-11431906 -	dse_726	GCGATACCCTTGTTGATGGCCTGCATTTCTTCGATTGCTACCGCAATGCCGTAAGAATAATA--AGTCACTAA-TT------------------------TA---------ATTCACTCGAGATCTTTAAA------------------------------------------------------------------------------------------------------------------AGATGATCTACCCCTTCAA------------------------GCACTAACGA-TTAT-AATGAATAGCTCTTTAAAA---------------------T----------------GATATTTGCCAACACACTGGTCTAGATTTTCATTCGTA---------------------------------------------------TGGTTTATTGCTCGATTAGAGCGCATTAAAAAAACGTGCCATT---GTCATAAATT--CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGAGC-TTAAGTGC-----TTTATA-----------AAGACTGAGA--GTCT----A------------T---------------------------------------------------CATTAAGGAAATA-----TAAATA------------------------------GTAACAT-GCAATATCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGCCT
droSim2	2r:14628263-14628644 -	dsi_20100	GCGATACCCTTGTTGATGGCCTGGATTTCTTCGACTGCTACCGCAATGCCGTAAGAATAATG--AGTCACTAA-TT------------------------TA---------ATTCACTCGAGATCTCCAAA------------------------------------------------------------------------------------------------------------------AGATGATCTACCCCTTTAA------------------------GCTCTAATGA-TTAT-AATGAATAGCTCTTTAAAA---------------------T----------------GTTCTTTGGCAACAAACTGGTCTAGGTTTTCATTCGTA---------------------------------------------------TGGTTTATTGCTCGATTAGAGCGCATTAAAAAAGCGTGCCATT---GTCATAAATT--CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGAGC-CAAAGTGC-----TTTATA-----------AAGACTGACA--GTCT----A------------T---------------------------------------------------CATTAAGGGAATA-----TAAATA------------------------------GTAACAT-GCAATATCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGTCT
dm3	chr2R:13938829-13939215 -		GCGATACCCTTGTTGATGGCCTGGAATTCTTCGACTGCTACCGCAATGCCGTAAGAAAAATT--ATTCACTAA-TT------------------------TA---------ATTATCTCGAAATCTCCAGA------------------------------------------------------------------------------------------------------------------AGATGATCTACCTCTTCAA------------------------GCACTTACGA-TTAT-AATGAAAAGCTCTTTAAAA---------------------T----------------GTGCCTTGGCCACACACTGGTCTAGATTTCCAATCGTA---------------------------------------------------TTGCTTACTGCTCGATTAGAGCGGATTAAAAAAGCGTGCCATT---GTCATAAATT--CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGAGC-TAAAGTGC-----TTTATA-----------ATGAGTGACA--GTCT----A------------A---------------------------------------------------CATTAAGGGAATATACAATAAATA------------------------------GTAACAT-GCAATATCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGCCT
droEre2	scaffold_4845:8166980-8167387 -		GCGATACCCTTGCGGATGGCCAGGAATTCTTCGACTGCTACCGCAATGCCGTAAGTATAAGA--T-----------------------------------------------------CTCGATCTCGAGA------------------------------------------------------------------------------------------------------------------AGTTGATCAACAGCTTCAA------------------------GCACTAACGA-TTAT-AATGGAAAACTCTTTAAAA---------------------T----------------GTGCTTCAGCAACACATTGGTCAAGATTTTGATTCGTA---------------------------------------------------TTGTTTATTGCTTGATTAGAGTGTAATCAATAAGCGTGCCATT---ATCTCAAATC--CATTAAACCCTTTATGGTATATAGAGCGTGCA---TA----------------------------------------------ATGCTTTTGTATTATTAG---AGAGC-TGAAGTGT-----TTTATA-----------AAGAC---GAGACTGT----C----------AGTCT-----------------------------------------TGAACAATTCTTTGCAGCATA-----TAAATA------------------------------GTAACAT-GTGCCATCTTTTAGTCCTCCGACAGCTACAAGGTAATGTTCACCCTGAACAGTGACTCCAGCAC
droYak3	2R:15238907-15239348 +		GCGATACCCTTGTGGATGGCCTGGAGTTCTTCGATTGCTACCGCAATGCCGTAAGTATCATG--AGTCACTAA-TA------------------------TATAGCTGTGAATAACATAGAGATCTCGGGA------------------------------------------------------------------------------------------------------------------AGATGATCAACATCTTCTA------------------------ACACCAACGA-TTATGAATGGAAACCTCTTTAAAA---------------------T----------------GTGCCTCAGCAACACATTGGTCTAGACTTTTATTCGTA---------------------------------------------------TGGTTTATTGCTTGATTAGAGTGTAATCAATAAGCGTGCCATT---AACTCAAATC--CATTAAATCGCTCATGTTATATAGAGCGTGCA---TAGGAT---------------------------------------------CTATTGTATTATTAGAGGACTGT-TGAAGTGT-----TTTATA-----------AAGTCTGACA--CTCT----T----------AATCA-----------------------------------------TGAACAGTAATTTACGGAACA-----TAATTA------------------------------TTAACAT-GCGTGTTCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGCCT
droEug1	scf7180000409672:1151408-1151690 +		GCGATATTAACATAGATGGTTTGGACTTCTTCCAATGTTACAGCACTGCCGTAAGTATTATA--GCTATGT----------------TATTAC----------------------------------GATCA--------------------TTTCATT-AAT--------AGAA-----------------------------------------------TTCCGGTCGAT-------AAATGATTTTAATGATT------TGAAAGGCTGTCAGGTTTACTTATACCTTTCACAA-ATAC-GTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATTTCATAA--------------------------AACTTTT-----------------------------------TCAATTCATTTTCTATAAATAACTAAAGTAAGACCTTTATCTCGTTTAGTCTTCCGACAGCTACAAGGTGATGTTTACCTTGAACAGTGATTCCAACCT
droBia1	scf7180000301754:2598894-2599312 +		GCGACGAACAAGTCGATGGACTGGCGTTCTTCGACTGCTACCGCAATGCCGTAAGTAGGAAT--A--C--------------------------------------------------CGGAATTACAGAT------------------------------------------------------------------------------------------------------------------AGACG---GGAT------CGAAAA-------------------GAGCTAGGAA-TT----------------------ATGTATAAATATGTTCTGGAATGTCAGTGG--------------------TATATCACACTATATTATCACCCGTATGGTCTCTGCTGATTCATTGTGTTTCCAATCTTAACGTTTATATATATT----AATTGTTGATCGATTAGCTTTCAACCAGTAAGCGCGTCATTTATTTGTTAACTTTGTAGT----A----------------------------------------------------------------------------------GTATCAACCGAAAAGAGTAAAAAATGCTAAAACGATTAGTAGCTGTATATGTACTCATA--A---------CCATACTTTCAT-------------------------------------------------------------------------------------------TACTA---------ATAACTCCCCTATCCCGTTTAGTCCTCCGACAGCTACAAGGTGATGTTCACCCTGAACAGTGACTCCAGCCT
droTak1	scf7180000415795:293728-294161 -		GCGATGAAATCGTTGATGGACTGGAGTTCTTTGACTGCTACCGCAGTGCCGTAAGTATTATA--A-TAACTAA-TT---------------------AATTA---------ATTAATTAAATATATTCAGTAGCAA------------AACTTTTAAAT-A-------------------------------------------------------------------------------------------------------------------------------CTACTAATGGCTTGTGAAT--------------------------------------------GGGTTA--------TCTTTATT---------------------CCCTTTGGTTTCGGCTGACTCAGAATG-CTCCATTCTAAACTTTTATAAAAACTCAACATTTATAGCTTGATTAGGTTGCAATCAGTAAGCGTGCCATTAATGTCTTAGCTT--CGAT----CCCTTAGTCTATGTAGAGCAAT----------------------------------------------------------ACTAAACCAGTAA---AAAAA-TGAAGTGG-----CTATTA-----------ATA----AGA--GTCTTTCGA------------A------------------A------ATAGAAATGTAATTATTTTGAAC---------------------TACTTA------------------------------GTAACAACCTTATCTCCTTTAGTCCTCTGACAGCTACAAGGTGATGTTCACACTGAACAGTGACTCCAGCCT
droEle1	scf7180000491214:267488-267632 +		GCGACGAACTCGTGGATGGCCTGAAGTTCTTCGACTGCTACCGCAATGCCGTACGTATGCTC----------------------TATTCTTACT--------TTGTCA----TGAAACA---------------------------------------------------------------------------------------GG----------------------------------------------------------------------AATCCTAAAGCCACTAATGA-TTAT-AATGGGAAGTTCTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTCCCGAAATA
droRho1	scf7180000779949:164518-164923 +		GCGATGATTTCGCAGATGGCCTGGCGTTCTTCGACTGCTACCGCAATGCCGTACGTAAAAGC-----CATT-----------------------------------------------ATAAATATCCAA-------------AGAACTACTTTCAATATAGTCCACATAT--------------------------------------------------------------------------AA-------------ATAA------------------------GGA------G-TA----------------------AGGAAATAATAT----------------GCGTTAATTTATAT--------------------------------ATTGACTTTGGCTGCCTCAGCAT--TTCCTTTC---ACATATATAATTATA--CATTTAATTGGTTGATTAGAATTTAATCACTTTTCATGCG---------------------------------------------------------------------------------TGAGGCATACACTT-----------AGGAAACCA-TAA---AATAA-TCGAAAAC-----CTATTAGT-----------A----GCT--GACTATCAT------------A------------------AGTGAAAAT----------------------------AGGGGCATATATAG---ATAGCTGCTATCAATT---T-----GACT-G--AATACAT--GTTTCTCTTTTAGTCTTCCGACAGCTACAAGGTTATGTTTACCCTGAACAGTGATTCTAGCCT
droFic1	scf7180000453948:1495074-1495436 +		GCGATGAGAAAGTCGATGGCCTGGAATTCTTCCAGTGCTACCGAGATGCCGTAAGCATTACC----------------------TAT------------------------------------TCTG---TAGTAGTATAATAAGATTAACTTTTAATT-G----------------------------------------------------------------------------------------------------------------------------------GTGGTAA-TT----------------------AGGTGGAAATAC----------------GCGTTTTACTATTCTTT-TTATCATATATCTCTACATTTTGACACAAA---------------------------------------------------TAATA---------------------------------------------------------------------TTATATAAATTGGCGATTGGGGCATATATTGTATTATCATTCCTTTCCGTGGTATTCTTTACTGATAA--------------------------------------------------------------------GGCTTTCGT-----------AA------------------AATTAAAAG----------------------------AGAATCATAAATAG---ATTGCTCCTATCAGTA---T-----TAAT------TAAA--ATTTTTTCTTTCAGTCCTCTGACAGCTACAAGACCATGTTCACCCTCAACAGTGACTCCAGCCT
droKik1	scf7180000302385:741355-741663 -		GCGATAACCTGCGCGACGGTCTGGACTTTTTCGAGTGCTACCGCGATGCGGTGAGTGTAGTG--AATATGTA---------------TAATAG----------------------------------ACTCATTAA------------AA-------CT-AAC--------TGAA-----------------------------------------------TC-TGAATAATGTGAACTGTGAGGTTCTAGAGGCT------AAAAAAG--------------------ATATCAGA-GTA---------------------TTATATATATATCTTTAGACTTATGTACGG--------------------TATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT--------------------------------------------------------------------------------------CAAGTACTCTTATTATTT-ATAA--------------------------GACATCT-----------------------------------CCAATTAAAA---TATAA-AAACTAAAATTTATTTTTAATTTTTTCTAGTCCTCCGACAGCTACAAGACCATGTTCACCCTGAACAGTGACTCCAATCT
droAna3	scaffold_13266:10250057-10250114 +		---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCCAGTCCACCAACAGCTACAAGACCATGTTCACTCTGAACAGTGATTCCAACCT
droBip1	scf7180000396428:668823-669133 +		GCGAAGCTAATTCCGATGGCCTGGACTTCTTTGATTGTTACCGCGATGCTGTAAGTATAACA--AT-CTTAAA-CTTTATAACCT------ACT--------TGGTCGTTAACGACACA---------------------------------------------------------------------------------------GGGAACTTTATCAGATTC-ATAAGTTTGTTAGCGCCAAGATTGTAGCTACTCCTTTAAAAAA--------------------ATATATTAGA-TTAT-AATGACCAGGTTTT-------------------------------------------GTTGTTTCCGAACAGATAAGTTTA-ATCTAAATATGTA---------------------------------------------------TGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT------------------------------------------------------------------------------------------TCTT---------ATAAGTT-GTTTTTTCTTTCAGTCTACCAACAGCTACAAGACCATGTTCACTCTAAACAGTGATTCCAACCT
dp5	3:6402504-6402559 -		-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTCCTCCGACAGCTACAAGACCATGTTCACCTTGAACAGTGACTCCAACCT
droPer2	scaffold_2:6618282-6618337 -		-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTCCTCCGACAGCTACAAGACCATGTTCACCTTGAACAGTGACTCCAACCT
droWil2	scf2_1100000004558:2491584-2491641 -		---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGTCCACTGACAGCTACAAGGTCATGTTCACTCTGAACAGTGATTCCAGTCA
droVir3	scaffold_12875:15168951-15169010 +		-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTCAGTCCGCTGACAGCTACAAAGTGATGTTCACTTTGAACAGTGATGCGAACAC
droMoj3	scaffold_6496:8662662-8662754 -		GTGATAAATATGTCGATGGTCTCGAGTTCTTCGATTGCTACCGCAATGCGGTAAGTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGAA-ATAT-ACTGAAATTCTTTACGAAA---------------------T----------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCT
droGri2	scaffold_15245:8161049-8161418 -		GCGAGTCGTTCGCTGATGGTCTCCAGTTTTTCGATTGTTATCGGACTTCGGTACGTACTCAGCAAT-TGGAAATCTGTGCGTTCT------ACCCAGATATA---------ATTACTTACGAATATACAAGACTAA------------AACTCC--------C--------TGTAATTTTTAAATGAATATTCTTCAACTAATACAGAAAA-TAGGGCATATTT----AGTCTGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAATTGGAACATTTT-----------------------------------------------------------------------------------------------------------------GC-------GACTTCTGCGAGAACAGG----------------------------------------------------CGAATACTCTAATTATTC-AAATTGATACAGA------AATGACACGCAATTCTCACGAAT---------------------AATTTT-----------------ATAA-TTGTCCGCATTGGATTTTAATCATTTTCAGTCGGCTGACAGTTACAAAGTGATGTTCACATTGAATAGCGACGCAAACAC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSec2

GCGATACCCTTGTTGATGGCCTGCATTTCTTCGATTGCTACCGCAATGCCGTAAGAATAATA--AGTCACTAA-TT------------------------TA---------ATTCACTCGAGATCTTTAAA------------------------------------------------------------------------------------------------------------------AGATGATCTACCCCTTCAA------------------------GCACTAACGA-TTAT-AATGAATAGCTCTTTAAAA---------------------T----------------GATATTTGCCAACACACTGGTCTAGATTTTCATTCGTA---------------------------------------------------TGGTTTATTGCTCGATTAGAGCGCATTAAAAAAACGTGCCATT---GTCATAAATT--CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGAGC-TTAAGTGC-----TTTATA-----------AAGACTGAGA--GTCT----A------------T---------------------------------------------------CATTAAGGAAATA-----TAAATA------------------------------GTAACAT-GCAATATCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGCCT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
........................ATTTCTTCGATTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	26.00	26	0	0	26	0
..........................TTCTTCGATTGCTACCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	7.00	7	0	0	7	0
........................ATTTCTTCGATTGCTACCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	5.00	5	0	0	5	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGTTATGTTCACCCTGAACAGT...........	26	1	4.00	4	0	0	4	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTT.............................	20	1	4.00	4	0	0	4	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGTTCACCCTGAACAGT...........	21	1	4.00	4	0	0	4	0
........................ATTTCTTCGATTGCTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	4.00	4	0	0	4	0
.........................TTTCTTCGATTGCTACCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	3	0
.........................TTTCTTCGATTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	0	3	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGTGACTCCAGCCT	18	1	3.00	3	0	0	3	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTACAAGGTTATGTT........................	18	1	3.00	3	0	0	3	0
.......................CATTTCTTCGATTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	3	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGGT..............................	18	1	3.00	3	0	0	3	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGGTTATGTTCACCCTGAACAGT...........	28	1	2.00	2	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGGTTAT...........................	18	1	2.00	2	0	0	2	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGTTATGTTCACCCTGAACAGT...........	27	1	2.00	2	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGGTTATGTT........................	21	1	2.00	2	0	0	2	0
.......................CATTTCTTCGATTGCTACCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	2	0
.................................................................................................................................................................................................................................................................................................................ATGAATAGCTCTTTAAAA---------------------T----------------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	2	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCTACAAGGTTATGT.........................	19	1	2.00	2	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................................GTCTAGATTTTCATTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	2	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----TTTATA-----------AAGACTGAGA--.......................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
..................................................................................................................CACTCGAGATCTTTAAA------------------------------------------------------------------------------------------------------------------AGATGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
...ATACCCTTGTTGATGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CGTA---------------------------------------------------TGGTTTATTGCTCGATTAGAGC...................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGGTTATGT.........................	20	1	1.00	1	0	0	1	0
..GATACCCTTGTTGATGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGA....................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................AT-AATGAATAGCTCTTTAAAA---------------------T----------------GAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCAGACGAGAGC-TTAAGTGC-----....................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTTATGTT........................	25	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATGTTCACCCTGAACAGT...........	22	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGACGAGAGC-TTAAGT...........................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCTGAACAGTGACTCCAGCCT	24	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGGTT.............................	19	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTATCAGACGAGAGC-.................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTA---------------------------------------------------TGGTTTATTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------TGGTTTATTGCTCGATTAGAG....................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGT..............................	19	1	1.00	1	0	0	1	0
...............................................................................................................ATTCACTCGAGATCTTTAAA------------------------------------------------------------------------------------------------------------------AGATGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCATTCGTA---------------------------------------------------TGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTACAAGGTTATGTT........................	19	1	1.00	1	0	0	1	0
........................................CCGCAATGCCGTAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
..GATACCCTTGTTGATGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................GGTCTAGATTTTCATTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................ATAGCTCTTTAAAA---------------------T----------------GAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTTAT...........................	22	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGAGC-.................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATCAGACGAGAGC-TTAAGTGC-----T...................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................CTAGATTTTCATTCGTA---------------------------------------------------TGGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
......................GCATTTCTTCGATTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACCCTGAACAGTGACTCC.....	21	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATTGCTCGATTAGAG....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGGTTATGTT........................	24	1	1.00	1	0	0	1	0
GCGATACCCTTGTTGATGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTTATGT.........................	24	1	1.00	1	0	0	1	0
......................GCATTTCTTCGATTGCTACCGCAATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................ATAGCTCTTTAAAA---------------------T----------------GATATTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
.....................................CTACCGCAATGCCGTAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
....................CTGCATTTCTTCGATTGCTACCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGACGAGAGC-TTAAGTGC-----T...................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCTACAAGGTTATGTT........................	20	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................CTAACGA-TTAT-AATGAATAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCTGAACAGTGACTCC.....	19	1	1.00	1	0	0	1	0
GCGATACCCTTGTTGATGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0

droSim2

GCGATACCCTTGTTGATGGCCTGGATTTCTTCGACTGCTACCGCAATGCCGTAAGAATAATG--AGTCACTAA-TT------------------------TA---------ATTCACTCGAGATCTCCAAA------------------------------------------------------------------------------------------------------------------AGATGATCTACCCCTTTAA------------------------GCTCTAATGA-TTAT-AATGAATAGCTCTTTAAAA---------------------T----------------GTTCTTTGGCAACAAACTGGTCTAGGTTTTCATTCGTA---------------------------------------------------TGGTTTATTGCTCGATTAGAGCGCATTAAAAAAGCGTGCCATT---GTCATAAATT--CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGAGC-CAAAGTGC-----TTTATA-----------AAGACTGACA--GTCT----A------------T---------------------------------------------------CATTAAGGGAATA-----TAAATA------------------------------GTAACAT-GCAATATCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGTCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
........................ATTTCTTCGACTGCTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ATACCCTTGTTGATGGCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGTGACTCCAGTCT	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GGCCTGGATTTCTTCGACTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CTTCGACTGCTACCGCAATGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TGATGGCCTGGATTTCTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGTTATGTTCACCCTGAACAGT...........	27	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAAGGTTATGTTCACCC...................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...............................CGACTGCTACCGCAATGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCTGAACAGTGACTCCAGT..	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CGACTGCTACCGCAATGCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....ACCCTTGTTGATGGCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TGATGGCCTGGATTTCTTCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GTTGATGGCCTGGATTTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ATACCCTTGTTGATGGCCTGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................GACTGCTACCGCAATGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGGTTATGTTCACCCTGAAC..............	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TGATGGCCTGGATTTCTTCGACTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......CCTTGTTGATGGCCTGGATTTCTTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ATACCCTTGTTGATGGCCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-CAAAGTGC-----TTTATA-----------AAGACTGACA--GT.....................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATTTCTTCGACTGCTACCGCAATGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............GATGGCCTGGATTTCTTCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

dm3

GCGATACCCTTGTTGATGGCCTGGAATTCTTCGACTGCTACCGCAATGCCGTAAGAAAAATT--ATTCACTAA-TT------------------------TA---------ATTATCTCGAAATCTCCAGA------------------------------------------------------------------------------------------------------------------AGATGATCTACCTCTTCAA------------------------GCACTTACGA-TTAT-AATGAAAAGCTCTTTAAAA---------------------T----------------GTGCCTTGGCCACACACTGGTCTAGATTTCCAATCGTA---------------------------------------------------TTGCTTACTGCTCGATTAGAGCGGATTAAAAAAGCGTGCCATT---GTCATAAATT--CATT----C----------------------------------------------------------------------------------GTATTATCAGACGAGAGC-TAAAGTGC-----TTTATA-----------ATGAGTGACA--GTCT----A------------A---------------------------------------------------CATTAAGGGAATATACAATAAATA------------------------------GTAACAT-GCAATATCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGCCT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGTGACTCCAGCCT	18	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TACCCTTGTTGATGGCCTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GTTGATGGCCTGGAATTCTTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..GATACCCTTGTTGATGGCCTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CCCTTGTTGATGGCCTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCGATACCCTTGTTGATGGCCTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................ATTCTTCGACTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CCTGGAATTCTTCGACTGCTACCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......CCTTGTTGATGGCCTGGAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AATTCTTCGACTGCTACCGCAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCTACAAGGTTATGTT........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTAGAGCGGATTAAAAAAGATC....................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGTTATGTTCACCCTGAA...............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTAAAAAAGCGTGCCATT---GT.........................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGGATTAAAAAAGCGAAG..................................................................................................................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GCGATACCCTTGCGGATGGCCAGGAATTCTTCGACTGCTACCGCAATGCCGTAAGTATAAGA--T-----------------------------------------------------CTCGATCTCGAGA------------------------------------------------------------------------------------------------------------------AGTTGATCAACAGCTTCAA------------------------GCACTAACGA-TTAT-AATGGAAAACTCTTTAAAA---------------------T----------------GTGCTTCAGCAACACATTGGTCAAGATTTTGATTCGTA---------------------------------------------------TTGTTTATTGCTTGATTAGAGTGTAATCAATAAGCGTGCCATT---ATCTCAAATC--CATTAAACCCTTTATGGTATATAGAGCGTGCA---TA----------------------------------------------ATGCTTTTGTATTATTAG---AGAGC-TGAAGTGT-----TTTATA-----------AAGAC---GAGACTGT----C----------AGTCT-----------------------------------------TGAACAATTCTTTGCAGCATA-----TAAATA------------------------------GTAACAT-GTGCCATCTTTTAGTCCTCCGACAGCTACAAGGTAATGTTCACCCTGAACAGTGACTCCAGCAC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCTGAACAGTGACTCCAGC..	22	1	4.00	4	0	4	0	0	0	0	0
..GATACCCTTGCGGATGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	4.00	4	0	3	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGT..............................	19	1	3.00	3	0	0	0	3	0	0	0
.................GGCCAGGAATTCTTCGACTGCTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTCACCCTGAACAGTGACTCCAGC..	28	1	2.00	2	0	2	0	0	0	0	0
..GATACCCTTGCGGATGGCCAGGAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	1	0	1	0	0	0
.......................GAATTCTTCGACTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	1	0	0	0
.........................ATTCTTCGACTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCCTGAACAGTGACTCCAGCAC	27	1	2.00	2	0	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAACCCTTTATGGTATATAGAGC....................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0
........................................................ATAAGA--T-----------------------------------------------------CTCGATCTCGAGA------------------------------------------------------------------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
GCGATACCCTTGCGGATGGCCAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTACAAGGTAATGTT........................	18	1	1.00	1	0	1	0	0	0	0	0
.................GGCCAGGAATTCTTCGACTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
.........................ATTCTTCGACTGCTACCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--CATTAAACCCTTTATGGTATATAGAGC....................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
..GATACCCTTGCGGATGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCTGAACAGTGACTCC.....	20	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGTGCCATT---ATCTCAAATC--CATT...........................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0
..GATACCCTTGCGGATGGCCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
............................CTTCGACTGCTACCGCAATGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
.....ACCCTTGCGGATGGCCAGGAATTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCTGAACAGTGACTCCAGCAC	25	1	1.00	1	0	1	0	0	0	0	0
.................GGCCAGGAATTCTTCGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
GCGATACCCTTGCGGATGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
GCGATACCCTTGCGGATGGCCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGGTAATGTTCACCCTGAAC..............	24	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCCTGAACAGTGACTCCAGCC.	26	1	1.00	1	0	1	0	0	0	0	0
....................CAGGAATTCTTCGACTGCTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
........................AATTCTTCGACTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCCTGAACAGTGACTCCAGC..	25	1	1.00	1	0	1	0	0	0	0	0
.................GGCCAGGAATTCTTCGACTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCCTGAACAGTGACTCCA....	23	1	1.00	1	0	0	0	1	0	0	0
.....ACCCTTGCGGATGGCCAGGAATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGG..............................	19	1	1.00	1	0	0	0	1	0	0	0
....TACCCTTGCGGATGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTGAACAGTGACTCCAGCAC	23	1	1.00	1	0	1	0	0	0	0	0
.........................ATTCTTCGACTGCTACCGCAATGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
.........................ATTCTTCGACTGCTACCGCAATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------TTGTTTATTGCTTGATTAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
.............GGATGGCCAGGAATTCTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCATT---ATCTCAAATC--...............................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0
..GATACCCTTGCGGATGGCCAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGAGCGTGCA---TA----------------------------------------------ATGCTT......................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGCGTGCCATT---ATCTCAAATC--C..............................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
.CGATACCCTTGCGGATGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCTGAACAGTGACTCCAGCAC	24	1	1.00	1	0	1	0	0	0	0	0
....................CAGGAATTCTTCGACTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
.................GGCCAGGAATTCTTCGACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGAC..............................	18	4	0.25	1	0	1	0	0	0	0	0

droYak3

GCGATACCCTTGTGGATGGCCTGGAGTTCTTCGATTGCTACCGCAATGCCGTAAGTATCATG--AGTCACTAA-TA------------------------TATAGCTGTGAATAACATAGAGATCTCGGGA------------------------------------------------------------------------------------------------------------------AGATGATCAACATCTTCTA------------------------ACACCAACGA-TTATGAATGGAAACCTCTTTAAAA---------------------T----------------GTGCCTCAGCAACACATTGGTCTAGACTTTTATTCGTA---------------------------------------------------TGGTTTATTGCTTGATTAGAGTGTAATCAATAAGCGTGCCATT---AACTCAAATC--CATTAAATCGCTCATGTTATATAGAGCGTGCA---TAGGAT---------------------------------------------CTATTGTATTATTAGAGGACTGT-TGAAGTGT-----TTTATA-----------AAGTCTGACA--CTCT----T----------AATCA-----------------------------------------TGAACAGTAATTTACGGAACA-----TAATTA------------------------------TTAACAT-GCGTGTTCTTTTAGTCCTCCGACAGCTACAAGGTTATGTTCACCCTGAACAGTGACTCCAGCCT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..GATACCCTTGTGGATGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	2	1	0	0	0	0	0	0	0
..GATACCCTTGTGGATGGCCTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	2	1	0	0	0	0	0	0	0
..GATACCCTTGTGGATGGCCTGGAGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.............GGATGGCCTGGAGTTCTTCGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..GATACCCTTGTGGATGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................ACCGCAATGCCGTAAGTATCATG--AGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCTAGACTTTTATTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............ATGGCCTGGAGTTCTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..............GATGGCCTGGAGTTCTTCGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTAGAGGACTGT-TGAAGT...........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCTGAACAGTGACTCC.....	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................CATAGAGATCTCGGGA------------------------------------------------------------------------------------------------------------------AGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............ATGGCCTGGAGTTCTTCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGGTT.............................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.............GGATGGCCTGGAGTTCTTCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............GGATGGCCTGGAGTTCTTCGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................GGCCTGGAGTTCTTCGATTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................GGAGTTCTTCGATTGCTACCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....TACCCTTGTGGATGGCCTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................GGAGTTCTTCGATTGCTACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCTGAACAGTGACTC......	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..............GATGGCCTGGAGTTCTTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............GGATGGCCTGGAGTTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0

droEug1

GCGATATTAACATAGATGGTTTGGACTTCTTCCAATGTTACAGCACTGCCGTAAGTATTATA--GCTATGT----------------TATTAC----------------------------------GATCA--------------------TTTCATT-AAT--------AGAA-----------------------------------------------TTCCGGTCGAT-------AAATGATTTTAATGATT------TGAAAGGCTGTCAGGTTTACTTATACCTTTCACAA-ATAC-GTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTATTTCATAA--------------------------AACTTTT-----------------------------------TCAATTCATTTTCTATAAATAACTAAAGTAAGACCTTTATCTCGTTTAGTCTTCCGACAGCTACAAGGTGATGTTTACCTTGAACAGTGATTCCAACCT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GCGACGAACAAGTCGATGGACTGGCGTTCTTCGACTGCTACCGCAATGCCGTAAGTAGGAAT--A--C--------------------------------------------------CGGAATTACAGAT------------------------------------------------------------------------------------------------------------------AGACG---GGAT------CGAAAA-------------------GAGCTAGGAA-TT----------------------ATGTATAAATATGTTCTGGAATGTCAGTGG--------------------TATATCACACTATATTATCACCCGTATGGTCTCTGCTGATTCATTGTGTTTCCAATCTTAACGTTTATATATATT----AATTGTTGATCGATTAGCTTTCAACCAGTAAGCGCGTCATTTATTTGTTAACTTTGTAGT----A----------------------------------------------------------------------------------GTATCAACCGAAAAGAGTAAAAAATGCTAAAACGATTAGTAGCTGTATATGTACTCATA--A---------CCATACTTTCAT-------------------------------------------------------------------------------------------TACTA---------ATAACTCCCCTATCCCGTTTAGTCCTCCGACAGCTACAAGGTGATGTTCACCCTGAACAGTGACTCCAGCCT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GCGATGAAATCGTTGATGGACTGGAGTTCTTTGACTGCTACCGCAGTGCCGTAAGTATTATA--A-TAACTAA-TT---------------------AATTA---------ATTAATTAAATATATTCAGTAGCAA------------AACTTTTAAAT-A-------------------------------------------------------------------------------------------------------------------------------CTACTAATGGCTTGTGAAT--------------------------------------------GGGTTA--------TCTTTATT---------------------CCCTTTGGTTTCGGCTGACTCAGAATG-CTCCATTCTAAACTTTTATAAAAACTCAACATTTATAGCTTGATTAGGTTGCAATCAGTAAGCGTGCCATTAATGTCTTAGCTT--CGAT----CCCTTAGTCTATGTAGAGCAAT----------------------------------------------------------ACTAAACCAGTAA---AAAAA-TGAAGTGG-----CTATTA-----------ATA----AGA--GTCTTTCGA------------A------------------A------ATAGAAATGTAATTATTTTGAAC---------------------TACTTA------------------------------GTAACAACCTTATCTCCTTTAGTCCTCTGACAGCTACAAGGTGATGTTCACACTGAACAGTGACTCCAGCCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GCGACGAACTCGTGGATGGCCTGAAGTTCTTCGACTGCTACCGCAATGCCGTACGTATGCTC----------------------TATTCTTACT--------TTGTCA----TGAAACA---------------------------------------------------------------------------------------GG----------------------------------------------------------------------AATCCTAAAGCCACTAATGA-TTAT-AATGGGAAGTTCTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTCCCGAAATA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GCGATGATTTCGCAGATGGCCTGGCGTTCTTCGACTGCTACCGCAATGCCGTACGTAAAAGC-----CATT-----------------------------------------------ATAAATATCCAA-------------AGAACTACTTTCAATATAGTCCACATAT--------------------------------------------------------------------------AA-------------ATAA------------------------GGA------G-TA----------------------AGGAAATAATAT----------------GCGTTAATTTATAT--------------------------------ATTGACTTTGGCTGCCTCAGCAT--TTCCTTTC---ACATATATAATTATA--CATTTAATTGGTTGATTAGAATTTAATCACTTTTCATGCG---------------------------------------------------------------------------------TGAGGCATACACTT-----------AGGAAACCA-TAA---AATAA-TCGAAAAC-----CTATTAGT-----------A----GCT--GACTATCAT------------A------------------AGTGAAAAT----------------------------AGGGGCATATATAG---ATAGCTGCTATCAATT---T-----GACT-G--AATACAT--GTTTCTCTTTTAGTCTTCCGACAGCTACAAGGTTATGTTTACCCTGAACAGTGATTCTAGCCT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GCGATGAGAAAGTCGATGGCCTGGAATTCTTCCAGTGCTACCGAGATGCCGTAAGCATTACC----------------------TAT------------------------------------TCTG---TAGTAGTATAATAAGATTAACTTTTAATT-G----------------------------------------------------------------------------------------------------------------------------------GTGGTAA-TT----------------------AGGTGGAAATAC----------------GCGTTTTACTATTCTTT-TTATCATATATCTCTACATTTTGACACAAA---------------------------------------------------TAATA---------------------------------------------------------------------TTATATAAATTGGCGATTGGGGCATATATTGTATTATCATTCCTTTCCGTGGTATTCTTTACTGATAA--------------------------------------------------------------------GGCTTTCGT-----------AA------------------AATTAAAAG----------------------------AGAATCATAAATAG---ATTGCTCCTATCAGTA---T-----TAAT------TAAA--ATTTTTTCTTTCAGTCCTCTGACAGCTACAAGACCATGTTCACCCTCAACAGTGACTCCAGCCT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GCGATAACCTGCGCGACGGTCTGGACTTTTTCGAGTGCTACCGCGATGCGGTGAGTGTAGTG--AATATGTA---------------TAATAG----------------------------------ACTCATTAA------------AA-------CT-AAC--------TGAA-----------------------------------------------TC-TGAATAATGTGAACTGTGAGGTTCTAGAGGCT------AAAAAAG--------------------ATATCAGA-GTA---------------------TTATATATATATCTTTAGACTTATGTACGG--------------------TATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT--------------------------------------------------------------------------------------CAAGTACTCTTATTATTT-ATAA--------------------------GACATCT-----------------------------------CCAATTAAAA---TATAA-AAACTAAAATTTATTTTTAATTTTTTCTAGTCCTCCGACAGCTACAAGACCATGTTCACCCTGAACAGTGACTCCAATCT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCCAGTCCACCAACAGCTACAAGACCATGTTCACTCTGAACAGTGATTCCAACCT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACCATGTTCACTCTGAACAGT...........	26	1	2.00	2	0	2	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCAACAGCTACAAGACCA............................	22	1	2.00	2	0	2	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAAGACCATGTTCACT....................	20	1	2.00	2	0	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACCATGTTCACTCTGAACAGC...........	26	1	2.00	2	0	2	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCAACAGCTACAAGACCAC...........................	23	1	2.00	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACAGTGATTCCAACCT	20	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCATGTTCACTCTGAAC..............	21	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACTCTGAACAGTGATTCCAACCT	27	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGACCATGTTCACTCTGAACAG............	26	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCATGTTCACTCTGAACAGT...........	23	1	1.00	1	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACAAGACCATGTTCAC.....................	20	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGACCATGTTCACT....................	19	1	1.00	1	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAACAGCTACAAGACCATGTT........................	25	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGTTCACTCTGAACAGTGATTCC.....	28	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGACCATGTTCACTCTGAACAGT...........	27	1	1.00	1	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGTTCACTCTGAACAGT...........	22	1	1.00	1	0	1	0	0	0	0

droBip1

GCGAAGCTAATTCCGATGGCCTGGACTTCTTTGATTGTTACCGCGATGCTGTAAGTATAACA--AT-CTTAAA-CTTTATAACCT------ACT--------TGGTCGTTAACGACACA---------------------------------------------------------------------------------------GGGAACTTTATCAGATTC-ATAAGTTTGTTAGCGCCAAGATTGTAGCTACTCCTTTAAAAAA--------------------ATATATTAGA-TTAT-AATGACCAGGTTTT-------------------------------------------GTTGTTTCCGAACAGATAAGTTTA-ATCTAAATATGTA---------------------------------------------------TGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTT------------------------------------------------------------------------------------------TCTT---------ATAAGTT-GTTTTTTCTTTCAGTCTACCAACAGCTACAAGACCATGTTCACTCTAAACAGTGATTCCAACCT	Size	Hit Count	Total Norm	Total
No Reads

dp5

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTCCTCCGACAGCTACAAGACCATGTTCACCTTGAACAGTGACTCCAACCT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACCATGTTCACCTTGAACAGT...........	26	1	3.00	3	0	0	0	0	3	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCATGTTCACCTTGAACAGT...........	24	1	2.00	2	0	0	0	0	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTTGAACAGTGACTCCAACCT	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGTTCACCTTGAAC..............	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTGAACAGTGACTCCAAC..	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGACCATGTTCACCTTGAAC..............	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAAGACCATGTTCACCTTGAACAGT...........	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGACCAT...........................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGCTACAAGACCATGTT........................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGACCATGTTCACCTTGAACAGT...........	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTTGAACAGTGACTCCAAC..	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCTTGAACAGTGACTCCAACCC	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0

droPer2

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTCCTCCGACAGCTACAAGACCATGTTCACCTTGAACAGTGACTCCAACCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCTACAAGACCATGTT........................	20	1	2.00	2	0	0	2	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCGACAGCTACAAGACCAT...........................	22	1	2.00	2	0	0	2	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACCATGTTCACCTTGAACAGT...........	26	1	2.00	2	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGTTCACCTTGAACAGT...........	22	1	1.00	1	0	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCATGTTCACCTTGAACAGT...........	23	1	1.00	1	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGACAGCTACAAGACCAT...........................	21	1	1.00	1	0	0	1	0	0	0

droWil2

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGTCCACTGACAGCTACAAGGTCATGTTCACTCTGAACAGTGATTCCAGTCA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGACAGCTACAAGGT..............................	18	1	6.00	6	0	0	0	6	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCATGTTCACTCTGAACAGT...........	23	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTACAAGGTCATGTT........................	18	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACAGTGATTCCAG...	19	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGACAGCTACAAGGT..............................	19	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGTCATGTTCACTCTGAACAGT...........	26	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGACAGCTACAAGGTC.............................	20	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTGAACAGTGATTCCAGT..	22	1	1.00	1	0	0	0	1	0

droVir3

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTCAGTCCGCTGACAGCTACAAAGTGATGTTCACTTTGAACAGTGATGCGAACAC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCACTTTGAACAGTGATG.......	23	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCTGACAGCTACAAAGT..............................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCACTTTGAACAGTGATGC......	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATGTTCACTTTGAACA.............	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCACTTTGAACAGTGATGCGA....	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTTCACTTTGAACAGT...........	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCACTTTGAACAGTGATGCGAAC..	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGACAGCTACAAAGTGATGTT........................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTTCACTTTGAACAGTGATGCGA....	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGACAGCTACAAAGT..............................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTTCACTTTGAACA.............	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTTCACTTTGAACAGTGATGC......	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCACTTTGAACAGTGATGCGAA...	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GTGATAAATATGTCGATGGTCTCGAGTTCTTCGATTGCTACCGCAATGCGGTAAGTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGAA-ATAT-ACTGAAATTCTTTACGAAA---------------------T----------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

GCGAGTCGTTCGCTGATGGTCTCCAGTTTTTCGATTGTTATCGGACTTCGGTACGTACTCAGCAAT-TGGAAATCTGTGCGTTCT------ACCCAGATATA---------ATTACTTACGAATATACAAGACTAA------------AACTCC--------C--------TGTAATTTTTAAATGAATATTCTTCAACTAATACAGAAAA-TAGGGCATATTT----AGTCTGTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAATTGGAACATTTT-----------------------------------------------------------------------------------------------------------------GC-------GACTTCTGCGAGAACAGG----------------------------------------------------CGAATACTCTAATTATTC-AAATTGATACAGA------AATGACACGCAATTCTCACGAAT---------------------AATTTT-----------------ATAA-TTGTCCGCATTGGATTTTAATCATTTTCAGTCGGCTGACAGTTACAAAGTGATGTTCACATTGAATAGCGACGCAAACAC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dse_726

scaffold_1:11431575-11431856 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-5.7	-5.3	-5.2