ID:

dse_70

 Coordinate:

scaffold_407:8620-8715 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-45.4 -45.4 -45.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Baggins1LINELOA-
mature
  1. dse_254  scaffold_655:6885-6909 +
  2. dse_253  scaffold_6806:907-931 +
  3. dse_70  scaffold_407:8691-8715 -
star

Sense Strand Reads

TATCTCCAGATCAGCAACGCCGACGATGGAGCCGATCATCAAATAGTCGGAAGTACAGGGATAACTCAGGTGAACATCCATCGCGCCAAGGCGGCCTCGGCTGTGCTGGCAAGGATGTTCACCTAACAACATCTTGGGCTAGCCCTGGTACAGGAACCCTGGTATAACCAGGAAATAAAAGGAATGTACGTGAAGA
***********************************.................((((((((.((.(((((((((((((((.....((((..(((((....)))))..))))..)))))))))))...........)))).)).)))).)))).........************************************ 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 M054
female body
 V115
head
 V113
male body
..................................................AAGTACAGGGATAACTCAGGTGAAC......................................................................................................................... 25 0 3 74.00 222 179 21 19 3
..................................................AAGTACAGGGATAACTCAGGTGAACA........................................................................................................................ 26 0 3 46.67 140 64 52 15 9
..................................................AAGTACAGGGATAACTCAGGTGAA.......................................................................................................................... 24 0 3 18.67 56 30 20 5 1
..................................................AAGTACAGGGATAACTCAGGTGA........................................................................................................................... 23 0 3 17.33 52 31 19 2 0
..................................................AAGTACAGGGATAACTCAGGTG............................................................................................................................ 22 0 3 6.67 20 9 8 2 1
..................................................AAGTACAGGGATAACTCAGGTGAACAT....................................................................................................................... 27 0 3 6.67 20 7 11 0 2
......................................................................................................................TCACCTAACAACATCTTGGGCTAGCCC................................................... 27 0 1 5.00 5 2 3 0 0
..................................................AAGTACAGGGATAACTCAGGTGAACATC...................................................................................................................... 28 0 3 4.67 14 3 9 0 2
..................................................AAGTACAGGGATAACTCAGGT............................................................................................................................. 21 0 3 2.33 7 5 2 0 0
......................................................................................................................TCACCTAACAACATCTTGGGCTAGCC.................................................... 26 0 1 2.00 2 0 2 0 0
......................................................................................................................TCACCTAACAACATCTTGGGCTA....................................................... 23 0 1 2.00 2 0 2 0 0
.................................................................................................................................................TGGTACAGGAACCCTGGTATAACC........................... 24 0 20 1.70 34 0 34 0 0
..................................................AAGTACAGGGATAACTCAGG.............................................................................................................................. 20 0 3 1.67 5 2 3 0 0
............................................................................TCCATCGCGCCAAGGCGGCCTCGGC............................................................................................... 25 0 20 1.55 31 0 31 0 0
......................................................................................................................TCACCTAACAACATCTTGGGCTAAC..................................................... 25 1 1 1.00 1 0 1 0 0
.......................................................................................................................CACCTAACAACATCTTGGGCTAGC..................................................... 24 0 1 1.00 1 0 1 0 0
...................................................AGTACAGGGATAACTCAGGTGAACA........................................................................................................................ 25 0 3 1.00 3 1 2 0 0
.......................................................................................................................CACCTAACAACATCTTGGGCTAG...................................................... 23 0 1 1.00 1 0 1 0 0
...................................................................................................................TGTTCACCTAACAACATCTTGGGCTAG...................................................... 27 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................TGGTATAACCAGGAAATAAAAGGA............. 24 0 1 1.00 1 0 1 0 0
.....................................................................................................................TTCACCTAACAACATCTTGGGCTAGCCC................................................... 28 0 1 1.00 1 1 0 0 0
...................................................AGTACAGGGATAACTCAGGTGA........................................................................................................................... 22 0 3 1.00 3 0 3 0 0
....................................................................................................................GTTCACCTAACAACATCTTGGGCTAGC..................................................... 27 0 1 1.00 1 0 1 0 0
......................................................................................................................TCACCTAACAACATCTTGGGCTAG...................................................... 24 0 1 1.00 1 0 1 0 0
........................................................................................................................ACCTAACAACATCTTGGGCTAGCCC................................................... 25 0 1 1.00 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGTAAAC......................................................................................................................... 25 1 3 0.67 2 0 1 0 1
..................................................AAGTACAGGGATAACTCAGGTGAT.......................................................................................................................... 24 1 3 0.67 2 2 0 0 0
...................................................AGTACAGGGATAACTCAGGTGAAC......................................................................................................................... 24 0 3 0.67 2 1 1 0 0
..................................................AAGTACAGGGATAACTCAGGGGAACA........................................................................................................................ 26 1 3 0.67 2 0 1 0 1
...................................................AGTACAGGGATAACTCAGGTGAA.......................................................................................................................... 23 0 3 0.67 2 0 2 0 0
..................................................AAGTACAGGGATAACTTAGGTGAAC......................................................................................................................... 25 1 4 0.50 2 2 0 0 0
TATCTCCAGATCAGCAACGCCGACGA.......................................................................................................................................................................... 26 0 20 0.40 8 0 8 0 0
..........TCAGCAACGCCGACGATGGAGCCGAT................................................................................................................................................................ 26 0 20 0.40 8 0 8 0 0
................................................................................TCGCGCCAAGGCGGCCTCGGCTGTG........................................................................................... 25 0 20 0.35 7 0 7 0 0
..................................................AAGTACAGGGATAACTCCGGTGAACA........................................................................................................................ 26 1 3 0.33 1 0 1 0 0
...................................................AGTACAGGGATAACTCAGGTGAACATC...................................................................................................................... 27 0 3 0.33 1 0 1 0 0
..................................................AGGTACAGGGATAACTCAGGTGAACAT....................................................................................................................... 27 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGT.............................................................................................................................. 20 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGTGTT.......................................................................................................................... 24 2 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGTGAATA........................................................................................................................ 26 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGCTAACTCAGTTGAACATC...................................................................................................................... 28 2 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCATGTGAC.......................................................................................................................... 24 2 3 0.33 1 1 0 0 0
..................................................AGGTACAGGGATAACTCAGGTGAAC......................................................................................................................... 25 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTAAGGTGAAC......................................................................................................................... 25 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATCACTCAGGTGAAC......................................................................................................................... 25 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGTGAGC......................................................................................................................... 25 1 3 0.33 1 1 0 0 0
...................................................AGCACAGGGATAACTCAGGTGAAC......................................................................................................................... 24 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGTGAACG........................................................................................................................ 26 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCATGTGAA.......................................................................................................................... 24 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAG............................................................................................................................... 19 0 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCTGGTGAAC......................................................................................................................... 25 1 3 0.33 1 1 0 0 0
......................................................ACAGGGATAACTCAGGTGAACATC...................................................................................................................... 24 0 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGTGATCA........................................................................................................................ 26 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGCTGAAC......................................................................................................................... 25 1 3 0.33 1 0 0 1 0
..................................................AAGTACAGGGATAACTCATGTG............................................................................................................................ 22 1 3 0.33 1 0 1 0 0
..................................................TAGTACAGGGATAACTCAGGTGAAC......................................................................................................................... 25 1 3 0.33 1 0 1 0 0
.................................................GAAGTACAGGGATAACTCAGGT............................................................................................................................. 22 0 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGTGAC.......................................................................................................................... 24 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGTAAC.......................................................................................................................... 24 2 3 0.33 1 0 0 1 0
...................................................AGTACAGGGATAACTCAGGTG............................................................................................................................ 21 0 3 0.33 1 0 1 0 0
..................................................AAGTACGGGGATAACTCAGGTGA........................................................................................................................... 23 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGGGAA.......................................................................................................................... 24 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGTGATAACTCAGGTGAACAT....................................................................................................................... 27 1 3 0.33 1 1 0 0 0
...................................................AGTACAGGGATAACTCAGGT............................................................................................................................. 20 0 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGTTGA........................................................................................................................... 23 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGTGAGCATC...................................................................................................................... 28 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGGGAACATC...................................................................................................................... 28 1 3 0.33 1 0 1 0 0
..................................................AAGTACCGGGATAACTCAGGTGAAC......................................................................................................................... 25 1 3 0.33 1 0 0 1 0
.................................................GAAGTACAGGGATAACTCAGGTGA........................................................................................................................... 24 0 3 0.33 1 1 0 0 0
..................................................AAGCACAGGGATAACTCAGGTGAAC......................................................................................................................... 25 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGTGAAAT........................................................................................................................ 26 2 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGTA............................................................................................................................ 22 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCATGTGAAC......................................................................................................................... 25 1 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACACAGGTGAAC......................................................................................................................... 25 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGAGATAACTCAGTTGAA.......................................................................................................................... 24 2 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGTGAG.......................................................................................................................... 24 1 3 0.33 1 1 0 0 0
..................................................AAGTACAGGGATAACTCAGGTGAACT........................................................................................................................ 26 1 3 0.33 1 0 0 1 0
.................................................................................................................................................TTGTACAGGAACCCTGGTATAACCAGGA....................... 28 1 3 0.33 1 0 1 0 0
......................................................................................................................TCACCTAACAACATCTTGGGCTAGTTT................................................... 27 3 3 0.33 1 0 1 0 0
..................................................AAGTACAGGGATAACTCAGGTTAACA........................................................................................................................ 26 1 4 0.25 1 0 1 0 0
..................................................AAGAACAGGGATAACTCAGGTGAAC......................................................................................................................... 25 1 4 0.25 1 0 1 0 0
....TCCAGATCAGCAACGCCGACGATGG....................................................................................................................................................................... 25 0 20 0.25 5 1 4 0 0
..................................................AAGTACAGGGATAACTCAGGTTAAC......................................................................................................................... 25 1 4 0.25 1 1 0 0 0
..................................................AAGTACAGGGATAACTTAGGTGAACA........................................................................................................................ 26 1 4 0.25 1 1 0 0 0
TATCTCCAGATCAGCAACGCCGACGATG........................................................................................................................................................................ 28 0 20 0.20 4 0 4 0 0
................................................................................TCGCGCCAAGGCGGCCTCGGCTGTGC.......................................................................................... 26 0 20 0.20 4 0 4 0 0
.....................GACGATGGAGCCGATCATCAAATAGT..................................................................................................................................................... 26 0 5 0.20 1 0 0 0 1
..................................................AAGTACAGGAATAACTCAGGTGAACA........................................................................................................................ 26 1 5 0.20 1 1 0 0 0
......................................................................................................................TCAACTAACAACATCTTGGGTTAGCCC................................................... 27 2 6 0.17 1 0 1 0 0
....................................CATCAAATAGTCGGAAGTACAGGGA....................................................................................................................................... 25 0 6 0.17 1 0 1 0 0
..........TCAGCAACGCCGACGATGGAGCC................................................................................................................................................................... 23 0 20 0.15 3 3 0 0 0
............AGCAACGCCGACGATGGAGCCGATCA.............................................................................................................................................................. 26 0 20 0.15 3 0 3 0 0
...................................................................................................................................TCTTGGGCTAGCCCTGGTACAGGA......................................... 24 0 20 0.15 3 0 3 0 0
..TCTCCAGATCAGCAACGCCGACGA.......................................................................................................................................................................... 24 0 20 0.15 3 0 3 0 0
..........TCAGCAACGCCGACGATGGAGCCGATC............................................................................................................................................................... 27 0 20 0.15 3 3 0 0 0
....TCCAGATCAGCAACGCCGACGAT......................................................................................................................................................................... 23 0 20 0.15 3 0 3 0 0
...........CAGCAACGCCGACGATGGAGC.................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0
....TCCAGATCAGCAACGCCGACGATGGAGC.................................................................................................................................................................... 28 0 20 0.10 2 0 2 0 0
......CAGATCAGCAACGCCGACGATGGAGC.................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0
....TCCAGATCAGCAACGCCGACGA.......................................................................................................................................................................... 22 0 20 0.10 2 0 2 0 0
..........TCAGCAACGCCGACGATGGAGC.................................................................................................................................................................... 22 0 20 0.10 2 0 2 0 0
....................................................................................................................................................TACAGGAACCCTGGTATAACC........................... 21 0 20 0.10 2 0 2 0 0
............AGCAACGCCGACGATGGAGCCGATCATC............................................................................................................................................................ 28 0 20 0.10 2 0 2 0 0
..................................................GAGTACAGGGATAACTCAGGTGAA.......................................................................................................................... 24 1 17 0.06 1 0 1 0 0
TATCTCCAGATCAGCAACGCCGACGAT......................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0
..............................................................................CATCGCGCCAAGGCGGCCTCGGCTG............................................................................................. 25 0 20 0.05 1 0 0 1 0
.................................................................................CGCGCCAAGGCGGCCTCGGCTGTGCAG........................................................................................ 27 1 20 0.05 1 0 1 0 0
...............AACGCCGACGATGGAGCCGATCATC............................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0
............................................................................................................................AACAACATCTTGGGCTAGCCC................................................... 21 0 20 0.05 1 1 0 0 0
...............................................................................................................................AACATCTTGGGCTAGCCCTGGTACAGG.......................................... 27 0 20 0.05 1 0 1 0 0
.............................................................................................GCCTCGGCTGTGCTGGCAAGGATG............................................................................... 24 0 20 0.05 1 1 0 0 0
...............................................................................................CTCGGCTGTGCTGGCAAGGATGTTCA........................................................................... 26 0 20 0.05 1 0 1 0 0
.......AGATCAGCAACGCCGACGATGGAGCCG.................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0
............................................................................................GGCCTCGGCTGTGCTGGCAAGG.................................................................................. 22 0 20 0.05 1 1 0 0 0
..............................................................................CATCGCGCCAAGGCGGCCTCGGCTGT............................................................................................ 26 0 20 0.05 1 0 1 0 0
................................................................................TCGCCCCAAGGCGGTCTCGGCTGT............................................................................................ 24 2 20 0.05 1 0 1 0 0
................................................................................TCGCGCCAAGGCGGCCTCGGCTGTA........................................................................................... 25 1 20 0.05 1 1 0 0 0
................................................................................TCGCGCCAAGGCGGCCTCGGCTGGGC.......................................................................................... 26 1 20 0.05 1 1 0 0 0
....TCCAGATCAGCAACGCCGACG........................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
..............................................................................CATCCCGCCAAGGCGGCCTCGGC............................................................................................... 23 1 20 0.05 1 0 1 0 0
...............................................................................................CTCGGCTGTGCTGGCAAGGATGTTCAC.......................................................................... 27 0 20 0.05 1 0 1 0 0
..........................................................................CATCTATCGCGCCAAGGCGGCCTC.................................................................................................. 24 1 20 0.05 1 0 1 0 0
................................................................................TCGCGCCAAGGCGGCCTCGGCTG............................................................................................. 23 0 20 0.05 1 1 0 0 0
...............................................................................ATCGCGCCAAGGCGGCCTCGGCTGTGCTG........................................................................................ 29 0 20 0.05 1 0 0 1 0
...............................................................................................................................................CCTGGGACAGGAACCCTGGTATAAC............................ 25 1 20 0.05 1 0 1 0 0
..........TCAGCAACGCCGACGGTGGAGCCGATC............................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0
.................CGCCGACGATGGAGCCGATCATC............................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

ATAGAGGTCTAGTCGTTGCGGCTGCTACCTCGGCTAGTAGTTTATCAGCCTTCATGTCCCTATTGAGTCCACTTGTAGGTAGCGCGGTTCCGCCGGAGCCGACACGACCGTTCCTACAAGTGGATTGTTGTAGAACCCGATCGGGACCATGTCCTTGGGACCATATTGGTCCTTTATTTTCCTTACATGCACTTCT
************************************.................((((((((.((.(((((((((((((((.....((((..(((((....)))))..))))..)))))))))))...........)))).)).)))).)))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V115
head
 V113
male body		 V114
embryo
..................................TAGTAGTTTCTCAGGCTTC............................................................................................................................................... 19 2 6 179.83 1079 511 355 149 64
.................................TTAGTAGTTTCTCAGGCTTC............................................................................................................................................... 20 3 20 143.60 2872 1391 454 811 216
...................................AGTAGTTTCTCAGGCTTC............................................................................................................................................... 18 2 10 15.20 152 50 88 2 12
..................................TAGTAGTTTCTCAGGCTTCT.............................................................................................................................................. 20 3 13 9.46 123 64 15 30 14
...................................AGTAGTTTCTCAGGCTTCT.............................................................................................................................................. 19 3 20 6.10 122 103 7 1 11
..................................TAGTAGTTTCTCAGGCTT................................................................................................................................................ 18 2 19 3.11 59 55 3 0 1
.............................................................................................................................................CGGGACCATGTCCTTGGGACCATAT.............................. 25 0 20 1.75 35 33 1 0 1
..................................TAGTAGTTTATCAGCCTTCATGTCCC........................................................................................................................................ 26 0 6 1.67 10 9 0 0 1
.................................CTAGTAGTTTATCAGCCTTCATGTCCC........................................................................................................................................ 27 0 6 1.67 10 8 1 0 1
........................................................................................................CGACCGTTCCTACAAGTGGATTGT.................................................................... 24 0 2 1.50 3 3 0 0 0
................................GTTAGTAGTTTCTCAGGCTTC............................................................................................................................................... 21 3 7 1.43 10 10 0 0 0
...................................AGTAGTTTATCAGCCTTCATGTCCC........................................................................................................................................ 25 0 6 1.17 7 7 0 0 0
..............................................................TTGAGTCCACTTGTAGGTAGCGCGGT............................................................................................................ 26 0 1 1.00 1 1 0 0 0
.................................TTAGTAGTTTCTCAGCCTTC............................................................................................................................................... 20 2 6 1.00 6 4 0 2 0
......................................................................................................CACGACCGTTCCTACAAGTGGATTGT.................................................................... 26 0 2 1.00 2 2 0 0 0
............................................................................................................CGTTCCTACAAGTGGATTGT.................................................................... 20 0 2 0.50 1 1 0 0 0
.......................................................................................................ACGACCGTTCCTACAAGTGGATTGT.................................................................... 25 0 2 0.50 1 1 0 0 0
.............................................................................................................................................CGGGACCATGTCCTTGGGACCATATT............................. 26 0 20 0.45 9 7 0 0 2
........CTAGTCGTTGCGGCTGCTACCTCGGCT................................................................................................................................................................. 27 0 20 0.45 9 4 1 0 4
.........................................................................................................................................CGATCGGGACCATGTCCTTGGGACCAT................................ 27 0 20 0.45 9 6 0 0 3
..................................TAGTAGTTTCTCAGTCTTC............................................................................................................................................... 19 2 9 0.44 4 2 2 0 0
........CTAGTCGTTGCGGCTGCTACCTCGGC.................................................................................................................................................................. 26 0 20 0.40 8 3 0 0 5
.................................CTAGTAGTTTCTCAGGCTTC............................................................................................................................................... 20 2 6 0.33 2 0 2 0 0
..AGAGGTCTAGTCGTTGCGGCTGCTACCT...................................................................................................................................................................... 28 0 20 0.30 6 6 0 0 0
................................CTTAGTAGTTTATCAGGCTTC............................................................................................................................................... 21 3 7 0.29 2 0 1 1 0
.................................GTAGTAGTTTCTCAGGCTTC............................................................................................................................................... 20 3 13 0.23 3 3 0 0 0
............................................................................................................................................TCGGGACCATGTCCTTGGGACCATAT.............................. 26 0 20 0.20 4 4 0 0 0
........CTAGTCGTTGCGGCTGCTACCTCGG................................................................................................................................................................... 25 0 20 0.20 4 2 2 0 0
...........................................................................................................................................ATCGGGACCATGTCCTTGGGACCATAT.............................. 27 0 20 0.20 4 4 0 0 0
.................................CTAGTATTTTATCAGCCTTCATGTCCC........................................................................................................................................ 27 1 6 0.17 1 1 0 0 0
..................................TAGTAGTTTCTCAGGCTTCCT............................................................................................................................................. 21 3 6 0.17 1 0 1 0 0
.................................TTAGTAGTTTATCAGGCTTC............................................................................................................................................... 20 2 6 0.17 1 0 0 1 0
.................................CTAGTAGTTTATCAGCCTTCATGTC.......................................................................................................................................... 25 0 6 0.17 1 1 0 0 0
................................TATAGTAGTTTATCAGCCTTCATGTCCC........................................................................................................................................ 28 2 6 0.17 1 1 0 0 0
..................................TAGTAGTTTCTCAGGCTTCA.............................................................................................................................................. 20 2 6 0.17 1 1 0 0 0
....................................GTAGTTTATCAGCCTTCATGTCCC........................................................................................................................................ 24 0 6 0.17 1 1 0 0 0
....................................GTAGTTTATCAGCCTTCATGTCCT........................................................................................................................................ 24 1 6 0.17 1 1 0 0 0
...................................AGTAGTTTATCAGCCTTCATGTCC......................................................................................................................................... 24 0 6 0.17 1 1 0 0 0
..................................TAGTAGTTTTTCAGGCTTC............................................................................................................................................... 19 2 6 0.17 1 1 0 0 0
..................................TAGTAGTTTCTCAGCCTTC............................................................................................................................................... 19 1 6 0.17 1 0 1 0 0
.................................CTAGTAGTTTATCAGCCTTCAT............................................................................................................................................. 22 0 6 0.17 1 1 0 0 0
................................CTTAGTAGTTTCTCAGCCTTC............................................................................................................................................... 21 3 7 0.14 1 1 0 0 0
.................................TTAGTAGTTTTTCAGGCTTC............................................................................................................................................... 20 3 16 0.13 2 2 0 0 0
.................................TTAGTAGTTTATCAGGCTTCT.............................................................................................................................................. 21 3 8 0.13 1 1 0 0 0
..................................TAGTAGTTTCTCAGGCTTCG.............................................................................................................................................. 20 3 8 0.13 1 1 0 0 0
..................................TAGTAGTTTCTCAGGCTTCC.............................................................................................................................................. 20 3 8 0.13 1 1 0 0 0
................................CCTAGTAGTTTCTCAGGCTTC............................................................................................................................................... 21 3 8 0.13 1 0 0 1 0
.................................CTAGTAGTTTCTCAGGCTTCT.............................................................................................................................................. 21 3 9 0.11 1 0 0 0 1
.................................TTAGTAGTTTCTCAGCCTTCT.............................................................................................................................................. 21 3 9 0.11 1 1 0 0 0
..AGAGGTCTAGTCGTTGCGGCTGCTACC....................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0
...................................AGTAGTTTCTCAGGCTTCTTG............................................................................................................................................ 21 3 10 0.10 1 1 0 0 0
ATAGAGGTCTAGTCGTTGCGGCTGCT.......................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0
.........................................................................................CCGCCGGAGCCGACACGACCGTTCCT................................................................................. 26 0 20 0.10 2 2 0 0 0
.............................................................................................................................................CGGGACCATGTCCTTGGGACCCTAT.............................. 25 1 20 0.10 2 2 0 0 0
............................................................................................................................................TCGGGACCATGTCCTTGGGACCATATT............................. 27 0 20 0.10 2 2 0 0 0
..........................................................................................CGCCGGAGCCGACACGACCGTTCCT................................................................................. 25 0 20 0.10 2 1 0 0 1
..........................................................................................................................................GATCGGGACCATGTCCTTGGGACCAT................................ 26 0 20 0.10 2 1 0 0 1
................................CTTAGTAGTTTATCAGGCTT................................................................................................................................................ 20 3 14 0.07 1 1 0 0 0
...................................AGTAGTTTCTCAGGCTTCTT............................................................................................................................................. 20 3 17 0.06 1 1 0 0 0
.........TAGTCGTTGCGGCTGCTACCTCGGC.................................................................................................................................................................. 25 0 20 0.05 1 0 0 0 1
.................................................................AGTCCACTTGTAGGTAGCGCGGT............................................................................................................ 23 0 20 0.05 1 1 0 0 0
.............................................................................................CGGAGCCGACACGACCGTTCCTACAAGT........................................................................... 28 0 20 0.05 1 1 0 0 0
...................................AATAGTTTATCAGGCTTCT.............................................................................................................................................. 19 3 20 0.05 1 1 0 0 0
.............................................................................................................................................CGGGACCATGTCCTTGGGACCAAATT............................. 26 1 20 0.05 1 1 0 0 0
..........................................................................................................................................GATCGGGACCATGTCCTTGGGACCATAT.............................. 28 0 20 0.05 1 1 0 0 0
...................................................................................................................................AGAACCCGATCGGGACCATG............................................. 20 0 20 0.05 1 0 0 0 1
..............GTTGCGGCTGCTACCTCGGCT................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
.TAGAGGTCTAGTCGTTGCGGCTGCTA......................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1
..................................................................................................................................TAGAACCCGATCGGGACCATGT............................................ 22 0 20 0.05 1 1 0 0 0
........CTAGTCGTTGCGGCTGCTACCTCG.................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
..........AGTCGTTGCGGCTGCTACCTCGGCTA................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
.................................................................................................................................GTAGAACCCGATCGGGACCATGTCCT......................................... 26 0 20 0.05 1 0 1 0 0
............TCGTTGCGGCTGCTACCTCGGCTAGT.............................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
..............................................................................................................................GTTGTAGAACCCGATCGGGACCAT.............................................. 24 0 20 0.05 1 1 0 0 0
..........AGTCCTTGCGGCTGCTACCTCGGC.................................................................................................................................................................. 24 1 20 0.05 1 0 0 0 1
.........TAGTCGTTTCGGCTGCTACCTCGG................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0
....................................................................................................................................GAACCCGATCGGGACCATGTCCT......................................... 23 0 20 0.05 1 1 0 0 0
............................................................................AGGTAGCGCGGTGCCGCCGGAGCCG............................................................................................... 25 1 20 0.05 1 1 0 0 0
..................................TCGTAGTTTCTCAGGCTTC............................................................................................................................................... 19 3 20 0.05 1 1 0 0 0
....................................................................CCACTTGTAGGTAGCGCGGTT........................................................................................................... 21 0 20 0.05 1 0 1 0 0
.....GGTCTAGTCGTTGCGGCTGCT.......................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1
.............CGTTGCGGCTGCTACCTCGGCT................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
..........AGTCGTTGCGGCTGCTACCTCGGC.................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
................................................................GAGTCCACTTGTAGGTAGCGCGGTT........................................................................................................... 25 0 20 0.05 1 0 0 0 1
...........GTCGTTGCGGCTGCTACCTCGGCT................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
.................................................................AGTCCACTTGTAGGTAGCGCGGTTC.......................................................................................................... 25 0 20 0.05 1 1 0 0 0
...................GGCTGCTACCTCGGCTAGTAG............................................................................................................................................................ 21 0 20 0.05 1 0 0 0 1
........................................................................................................................................CCGATCGGGACCATGTCCTTG....................................... 21 0 20 0.05 1 1 0 0 0
......................................................................ACTTGTAGGTAGCGCGGTTCCGCCGG.................................................................................................... 26 0 20 0.05 1 0 0 0 1
..............GTTGCGGCTGCTACCTCGGC.................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0
........................................................................................................................................CCGATCGGGACCATGTCCTTGGGACCAT................................ 28 0 20 0.05 1 1 0 0 0
..............................................................................................................................TTTGTAGAACCCGATCGGGACCATGT............................................ 26 1 20 0.05 1 1 0 0 0
.............................................................................................................................................CGGGACCATGTCCTTGGGACCATATTGGT.......................... 29 0 20 0.05 1 1 0 0 0
................................................................................................................................TGTAGAACCCGATCGGGACC................................................ 20 0 20 0.05 1 1 0 0 0
.............................................................................................................................................CGGGACCATGTCCTTTGGACCATATT............................. 26 1 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_407:8570-8765 - dse_70 TATC-TCC---AGATCAGCAACGCC---G---ACGATGGAGCCGATCATCAAATAGTCGGAAGTACAGGGATAACTCAGGTGAACATCCATCGCGCCAAGGCGGCCTCGGCTGTGCTGGCAAGGATGTTCACCTAACAACATCTT---------------------GGGCTAGCCCTGGTACAGGAACCCTGGT-----------------ATAACCAGGAAATAAAAGGAATGTACGT------------GAAGA
droSim2 2l:21625017-21625212 - TATC-TCC---AGATCAGCAACGCC---G---ACGATGGAGCCGATCATCTAATGGTCTGAAGTACAGGGATAGCTCAGGTGAACATCCATCGCTCCAAGGCGGCCTCGGCTGTGCTGGCAAGGATGTTCACCAAACAACATCTT---------------------GGGCTAGCCCTGGTACAGGAACCCTGGT-----------------ATAACCAGGGAATAAAAGGACTGTACGT------------GAAGA
dm3 chr2R:419644-419839 - CATC-TCC---AGATCAGTAACGCC---G---ATGATGGAGCCGATCATCTAATAGTCGGGAGTACAGGGATAGCTCAGGTGAACATCCATCGCGCCAAGGCGGTCTCGGCCGTGCTGGCAAGGATGTTCACCAAACAACATCTT---------------------GGGCTAACCCTGGTACAGGAACCCTGGT-----------------ATAACCAGGGAATAAAAGGACTGTACGT------------GAAGA
droYak3 2L:21710144-21710144 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--
droTak1 scf7180000415225:5370-5465 + CA----------------------------------------------------------------------------AATCAATCTCCACCACAGTAAGGCAGCTTCGGCTGCGCT---------------------ACAGCTTCGCCTGGCTCAGGGCGAAGCCGACTTAGTCCTGGTACAGGAACCTTGG---------------------------------------------------------------
droEle1 scf7180000488868:439-629 + TCTC-TCTCACGGAGCATCAAACCTCGGA---GTGATGGCTGCA-----------ACAAGCAGCACTCGGCTAGCCCAGGTAAACATCCATCGGGCCAAAGCAGCATCTGCTGTCTTGGCGAGGATGTTCACCTCCCAACACCTC---------------------GGGCTAGCCCTTGTACAGGAGCCATGGT-----------------GGCACCATGGCATAAAAGGCCTGTACAC------------GAAGG
droRho1 scf7180000766013:27007-27007 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--
droFic1 scf7180000453853:13636-13817 + C----TCT---GGAGCATCCGATCC---A---GTGATGGCTTCA-----------AACAGCAGCACAAAGCTAGCCCAGGTGAACTTACACCGGGCCAAGGCGGCATCAGCCGTCCTGGCCAGGCTGTTCACCACACAACATCTT---------------------GGGCTAGCTCTTATACAGGAGCCTTGGT-----------------GTAATCAGGGCATTAAAGGCCTGTACAC------------CAAGG
droKik1 scf7180000302223:4044-4199 - CAG----------------------------------------------------------------------------CTCAACCTCCATAAGAGCAAGGTCGCGTCGGCGGAACTCCTCATAGCCATGGAGCAAGGATCCGCC---------------------GACATAGCTTTGGTACAGAAGCCATGGATCGCCTCAGGCAATGCCATCACCCGAAGGACCAGCAACTGCACGTGGGTGCAGACGCC---A
droAna3 scaffold_13272:466739-466739 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--
droBip1 scf7180000391519:12810-12810 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--
dp5 Unknown_group_13:78085-78085 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--
droPer2 scaffold_1059:1994-2056 + CAGGAGCC---TGGTGACAGAACCC---G---GCACCAAAAACAATCAACTCGTCATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACGGACGC------------CAA--
droGri2 scaffold_14906:13867378-13867574 - TAAC-TCC---AGGCCCAAATCACC---GTGTCAGCTGAAGTAGGTGTCC--AAGGTCATCAAAACAGGGCTGGCTCCGGTAAACATCCACCGAGCTAACGCAGCCTCGGCGGTCTTAGCAAGGATGTTTACCAAGCAACACCTT---------------------GGGCTAGCCCTGGTACAGGAGCCATTGG-----------------TGAACAATGGCTTAAAAGGCCTGTACAC------------CCAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TATC-TCC---AGATCAGCAACGCC---G---ACGATGGAGCCGATCATCAAATAGTCGGAAGTACAGGGATAACTCAGGTGAACATCCATCGCGCCAAGGCGGCCTCGGCTGTGCTGGCAAGGATGTTCACCTAACAACATCTT---------------------GGGCTAGCCCTGGTACAGGAACCCTGGT-----------------ATAACCAGGAAATAAAAGGAATGTACGT------------GAAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................AAGTACAGGGATAACTCAGGTGAAC...........................................................................................................................................................................25374.0022221317919
............................................................AAGTACAGGGATAACTCAGGTGAACA..........................................................................................................................................................................26346.671405296415
............................................................AAGTACAGGGATAACTCAGGTGAA............................................................................................................................................................................24318.6756201305
............................................................AAGTACAGGGATAACTCAGGTGA.............................................................................................................................................................................23317.3352190312
............................................................AAGTACAGGGATAACTCAGGTG..............................................................................................................................................................................2236.67208192
............................................................AAGTACAGGGATAACTCAGGTGAACAT.........................................................................................................................................................................2736.672011270
................................................................................................................................TCACCTAACAACATCTT---------------------GGGCTAGCCC................................................................................2715.0053020
............................................................AAGTACAGGGATAACTCAGGTGAACATC........................................................................................................................................................................2834.67149230
............................................................AAGTACAGGGATAACTCAGGT...............................................................................................................................................................................2132.3372050
................................................................................................................................TCACCTAACAACATCTT---------------------GGGCTAGCC.................................................................................2612.0022000
................................................................................................................................TCACCTAACAACATCTT---------------------GGGCTA....................................................................................2312.0022000
................................................................................................................................................................................TGGTACAGGAACCCTGGT-----------------ATAACC.......................................24201.703434000
............................................................AAGTACAGGGATAACTCAGG................................................................................................................................................................................2031.6753020
......................................................................................TCCATCGCGCCAAGGCGGCCTCGGC.................................................................................................................................................25201.553131000
.................................................................................................................................CACCTAACAACATCTT---------------------GGGCTAGC..................................................................................2411.0011000
.............................................................AGTACAGGGATAACTCAGGTGAACA..........................................................................................................................................................................2531.0032010
.................................................................................................................................CACCTAACAACATCTT---------------------GGGCTAG...................................................................................2311.0011000
.............................................................................................................................TGTTCACCTAACAACATCTT---------------------GGGCTAG...................................................................................2711.0010010
..............................................................................................................................................................................................TGGT-----------------ATAACCAGGAAATAAAAGGA.........................2411.0011000
...............................................................................................................................TTCACCTAACAACATCTT---------------------GGGCTAGCCC................................................................................2811.0010010
.............................................................AGTACAGGGATAACTCAGGTGA.............................................................................................................................................................................2231.0033000
..............................................................................................................................GTTCACCTAACAACATCTT---------------------GGGCTAGC..................................................................................2711.0011000
................................................................................................................................TCACCTAACAACATCTT---------------------GGGCTAG...................................................................................2411.0011000
..................................................................................................................................ACCTAACAACATCTT---------------------GGGCTAGCCC................................................................................2511.0010010
............................................................AAGTACAGGGATAACTCAGGTGAT............................................................................................................................................................................2430.6720020
.............................................................AGTACAGGGATAACTCAGGTGAAC...........................................................................................................................................................................2430.6721010
.............................................................AGTACAGGGATAACTCAGGTGAA............................................................................................................................................................................2330.6722000
TATC-TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................26200.4088000
..............TCAGCAACGCC---G---ACGATGGAGCCGAT..................................................................................................................................................................................................................26200.4088000
..........................................................................................TCGCGCCAAGGCGGCCTCGGCTGTG.............................................................................................................................................25200.3577000
.............................................................AGTACAGGGATAACTCAGGTGAACATC........................................................................................................................................................................2730.3311000
............................................................AAGTACAGGGATAACTCAGT................................................................................................................................................................................2030.3311000
............................................................AAGTACAGGGATAACTCAGGTGTT............................................................................................................................................................................2430.3310010
............................................................AAGTACAGGGATAACTCAGGTGAACG..........................................................................................................................................................................2630.3310010
............................................................AAGTACAGGGATAACTCAG.................................................................................................................................................................................1930.3311000
................................................................ACAGGGATAACTCAGGTGAACATC........................................................................................................................................................................2430.3310010
...........................................................GAAGTACAGGGATAACTCAGGT...............................................................................................................................................................................2230.3310010
............................................................AAGTACAGGGATAACTCAGGTGAC............................................................................................................................................................................2430.3311000
.............................................................AGTACAGGGATAACTCAGGTG..............................................................................................................................................................................2130.3311000
.............................................................AGTACAGGGATAACTCAGGT...............................................................................................................................................................................2030.3311000
...........................................................GAAGTACAGGGATAACTCAGGTGA.............................................................................................................................................................................2430.3310010
............................................................AAGTACAGGGATAACTCAGGTGAAAT..........................................................................................................................................................................2630.3311000
............................................................AAGTACAGGGATAACTCAGGTA..............................................................................................................................................................................2230.3310010
............................................................AAGTACAGGGATAACTCAGGTGAG............................................................................................................................................................................2430.3310010
............................................................AAGTACAGGGATAACTCAGGTGAACT..........................................................................................................................................................................2630.3310001
................................................................................................................................TCACCTAACAACATCTT---------------------GGGCTAGTTT................................................................................2730.3311000
.....TCC---AGATCAGCAACGCC---G---ACGATGG.........................................................................................................................................................................................................................25200.2554010
TATC-TCC---AGATCAGCAACGCC---G---ACGATG..........................................................................................................................................................................................................................28200.2044000
..........................................................................................TCGCGCCAAGGCGGCCTCGGCTGTGC............................................................................................................................................26200.2044000
............................G---ACGATGGAGCCGATCATCAAATAGT.......................................................................................................................................................................................................2650.2010100
..............................................CATCAAATAGTCGGAAGTACAGGGA.........................................................................................................................................................................................2560.1711000
..............TCAGCAACGCC---G---ACGATGGAGCC.....................................................................................................................................................................................................................23200.1530030
................AGCAACGCC---G---ACGATGGAGCCGATCA................................................................................................................................................................................................................26200.1533000
.............................................................................................................................................TCTT---------------------GGGCTAGCCCTGGTACAGGA......................................................................24200.1533000
..TC-TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................24200.1533000
..............TCAGCAACGCC---G---ACGATGGAGCCGATC.................................................................................................................................................................................................................27200.1530030
.....TCC---AGATCAGCAACGCC---G---ACGAT...........................................................................................................................................................................................................................23200.1533000
...............CAGCAACGCC---G---ACGATGGAGC......................................................................................................................................................................................................................21200.1530030
.....TCC---AGATCAGCAACGCC---G---ACGATGGAGC......................................................................................................................................................................................................................28200.1022000
.......C---AGATCAGCAACGCC---G---ACGATGGAGC......................................................................................................................................................................................................................26200.1020020
.....TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................22200.1022000
..............TCAGCAACGCC---G---ACGATGGAGC......................................................................................................................................................................................................................22200.1022000
...................................................................................................................................................................................TACAGGAACCCTGGT-----------------ATAACC.......................................21200.1022000
................AGCAACGCC---G---ACGATGGAGCCGATCATC..............................................................................................................................................................................................................28200.1022000
TATC-TCC---AGATCAGCAACGCC---G---ACGAT...........................................................................................................................................................................................................................27200.0511000
........................................................................................CATCGCGCCAAGGCGGCCTCGGCTG...............................................................................................................................................25200.0510001
...................AACGCC---G---ACGATGGAGCCGATCATC..............................................................................................................................................................................................................25200.0511000
......................................................................................................................................AACAACATCTT---------------------GGGCTAGCCC................................................................................21200.0510010
.........................................................................................................................................AACATCTT---------------------GGGCTAGCCCTGGTACAGG.......................................................................27200.0511000
.......................................................................................................GCCTCGGCTGTGCTGGCAAGGATG.................................................................................................................................24200.0510010
.........................................................................................................CTCGGCTGTGCTGGCAAGGATGTTCA.............................................................................................................................26200.0511000
...........AGATCAGCAACGCC---G---ACGATGGAGCCG....................................................................................................................................................................................................................27200.0510010
......................................................................................................GGCCTCGGCTGTGCTGGCAAGG....................................................................................................................................22200.0510010
........................................................................................CATCGCGCCAAGGCGGCCTCGGCTGT..............................................................................................................................................26200.0511000
..........................................................................................TCGCGCCAAGGCGGCCTCGGCTGTA.............................................................................................................................................25200.0510010
.....TCC---AGATCAGCAACGCC---G---ACG.............................................................................................................................................................................................................................21200.0510010
.........................................................................................................CTCGGCTGTGCTGGCAAGGATGTTCAC............................................................................................................................27200.0511000
..........................................................................................TCGCGCCAAGGCGGCCTCGGCTG...............................................................................................................................................23200.0510010
.........................................................................................ATCGCGCCAAGGCGGCCTCGGCTGTGCTG..........................................................................................................................................29200.0510001
.....................CGCC---G---ACGATGGAGCCGATCATC..............................................................................................................................................................................................................23200.0510010
droSim2
TATC-TCC---AGATCAGCAACGCC---G---ACGATGGAGCCGATCATCTAATGGTCTGAAGTACAGGGATAGCTCAGGTGAACATCCATCGCTCCAAGGCGGCCTCGGCTGTGCTGGCAAGGATGTTCACCAAACAACATCTT---------------------GGGCTAGCCCTGGTACAGGAACCCTGGT-----------------ATAACCAGGGAATAAAAGGACTGTACGT------------GAAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................ATGGAGCCGATCATCTAATGGTCTGA...................................................................................................................................................................................................26130.0030000100111026000000
...................................ATGGAGCCGATCATCTAATGGTCTG....................................................................................................................................................................................................25215.0030000000000030000000
................................................TCTAATGGTCTGAAGTACAGGGA.........................................................................................................................................................................................2319.00900000061100010000
...........................................GATCATCTAATGGTCTGAAGTACAGGGA.........................................................................................................................................................................................2819.00900000081000000000
...................................ATGGAGCCGATCATCTAATGGTCT.....................................................................................................................................................................................................2426.0012000000000012000000
...................................................................................................................................CCAAACAACATCTT---------------------GGGCTAGCCCTGG.............................................................................27205.401080000001000710000000
....................................TGGAGCCGATCATCTAATGGTCTGAAG.................................................................................................................................................................................................2715.00500000002012000000
..........................................................TGAAGTACAGGGATAGCTCAGGTGAACA..........................................................................................................................................................................2815.00500000040000010000
.....................................................TGGTCTGAAGTACAGGGATAGCTCAGG................................................................................................................................................................................2714.00400000021100000000
.....................................................TGGTCTGAAGTACAGGGATAGCTC...................................................................................................................................................................................2414.00400000010001020000
...................................ATGGAGCCGATCATCTAATGGTC......................................................................................................................................................................................................23133.5446000000000046000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTCA.............................................................................................................................25203.0561000000000000556000
..................................................TAATGGTCTGAAGTACAGGGATAGCTC...................................................................................................................................................................................2713.00300000000002010000
................................................TCTAATGGTCTGAAGTACAGG...........................................................................................................................................................................................2113.00300010001010000000
..................................................TAATGGTCTGAAGTACAGGGAT........................................................................................................................................................................................2213.00300000000012000000
................................................................................TGAACATCCATCGCTCCAAGGCGGC.......................................................................................................................................................2513.00300110001000000000
.............................................TCATCTAATGGTCTGAAGTACAGGGA.........................................................................................................................................................................................2613.00300000020010000000
..................................................TAATGGTCTGAAGTACAGGGATA.......................................................................................................................................................................................2312.00200000000002000000
..................................................TAATGGTCTGAAGTACAGGGATAGC.....................................................................................................................................................................................2512.00200000000002000000
....................................TGGAGCCGATCATCTAATGGTCTGA...................................................................................................................................................................................................2512.00200000010100000000
............................................................................CAGGTGAACATCCATCGCTCCAAGGC..........................................................................................................................................................2612.00200000011000000000
................................................TCTAATGGTCTGAAGTACAG............................................................................................................................................................................................2012.00200000011000000000
...................................ATGGAGCCGATCATCTAATGGTCTGAAG.................................................................................................................................................................................................2812.00200000010001000000
.....................................................TGGTCTGAAGTACAGGGATAGCT....................................................................................................................................................................................2312.00200000000000020000
.....................................................TGGTCTGAAGTACAGGGATAGCTCA..................................................................................................................................................................................2512.00200000010000010000
..................................................TAATGGTCTGAAGTACAGGGA.........................................................................................................................................................................................2112.00200000002000000000
..........................................................TGAAGTACAGGGATAGCTCAGGTGAA............................................................................................................................................................................2612.00200000000110000000
................................................TCTAATGGTCTGAAGTACAGGG..........................................................................................................................................................................................2212.00200000002000000000
.....TCC---AGATCAGCAACGCC---G---ACGATGGAGC......................................................................................................................................................................................................................2891.891700020033224010000
......................GCC---G---ACGATGGAGCCGATCATCTAA...........................................................................................................................................................................................................25131.6221000000170300010000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTT...............................................................................................................................23201.6032000000020100290000
...........................................................................................................................................................................AGCCCTGGTACAGGAACCCTGGT-----------------.............................................23201.5531000031000000000000
...................................ATGGAGCCGATCATCTAATGGT.......................................................................................................................................................................................................22131.5420000000000020000000
......................GCC---G---ACGATGGAGCCGATCATCTA............................................................................................................................................................................................................24131.4619000000150301000000
.....TCC---AGATCAGCAACGCC---G---ACGATGGA........................................................................................................................................................................................................................26151.4021000000011217000000
TATC-TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................26181.332400000009057030000
...................................................................................................................................................................................................................................AGGACTGTACGT------------GAAGA17201.1523000000100121000000
......................................................................................................GGCCTCGGCTGTGCTGGCAAGGATG.................................................................................................................................25201.0521000000031030131000
................................................TCTAATGGTCTGAAGTACAGGGATAAT.....................................................................................................................................................................................2711.00100000001000000000
..........................................CGATCATCTAATGGTCTGAAGTACAGGGA.........................................................................................................................................................................................2911.00100000001000000000
...........................................GATCATCTAATGGTCTGAAGTACAGGG..........................................................................................................................................................................................2711.00100000001000000000
.................................CGATGGAGCCGATCATCTAATGGTCTGA...................................................................................................................................................................................................2811.00100000000100000000
................................................................................TGAACATCCATCGCTCCAAGGCGGCCT.....................................................................................................................................................2711.00100000000100000000
.............................................................................AGGTGAACATCCATCGCTCCAAGGCGGC.......................................................................................................................................................2811.00100000010000000000
...........................................GATCATCTAATGGTCTGAAGTACAGG...........................................................................................................................................................................................2611.00100000010000000000
..................................................TAATGGTCTGAAGTACAGGG..........................................................................................................................................................................................2011.00100000000100000000
............................................ATCATCTAATGGTCTGA...................................................................................................................................................................................................1711.00100000000001000000
................................................................................................................................................................................TGGTACAGGAACCCTGGT-----------------ATAACC.......................................24201.0020000000000200000000
..................................................TAATGGTCTGAAGTACAGGGATAGCT....................................................................................................................................................................................2611.00100000000001000000
.........................................................CTGAAGTACAGGGATAGCTCA..................................................................................................................................................................................2111.00100000000001000000
...........................................GATCATCTAATGGTCTGAAGTACAGGGAA........................................................................................................................................................................................2911.00100000000000010000
..............................................CATCTAATGGTCTGAAGTACAGGGA.........................................................................................................................................................................................2511.00100000000010000000
..................................................TAATGGTCTGAAGTACA.............................................................................................................................................................................................1711.00100000000001000000
............................................ATCATCTAATGGTCTGAAGTACAGGGA.........................................................................................................................................................................................2711.00100000010000000000
.......................................AGCCGATCATCTAATGGTCT.....................................................................................................................................................................................................2021.00200000000002000000
........................................................................AGCTCAGGTGAACATCCATCGCT.................................................................................................................................................................2311.00100000000001000000
...................................ATGGAGCCGATCATCTAATGGTCTGAT..................................................................................................................................................................................................2711.00100000000001000000
...........................................GATCATCTAATGGTCTGAAGTACAGT...........................................................................................................................................................................................2611.00100000000001000000
........................................................................AGCTCAGGTGAACATCCATCGCTCA...............................................................................................................................................................2511.00100000010000000000
.....................................................TGGTCTGAAGTACAGGGATAGCTA...................................................................................................................................................................................2411.00100000000000010000
..........................................................TGAAGTACAGGGATAGCTCAGG................................................................................................................................................................................2211.00100000000000010000
................................................................................TGAACATCCATCGCTCCAAGGCGGCC......................................................................................................................................................2611.00100000000001000000
....................................TGGAGCCGATCATCTAATGGTCTGAA..................................................................................................................................................................................................2611.00100000000100000000
.............................................................................................................................TGTTCACCAAACAACATCTT---------------------GGGCTA....................................................................................26200.9018000500000013000000
...............................................................TACAGGGATAGCTCAGGTGAACATC........................................................................................................................................................................25200.851700600000008120000
..............TCAGCAACGCC---G---ACGATGGAGCCGA...................................................................................................................................................................................................................25200.801600000004044040000
...............................................................TACAGGGATAGCTCAGGTGAACATCCA......................................................................................................................................................................27200.8016000000000016000000
..............TCAGCAACGCC---G---ACGATGGAGCCGAT..................................................................................................................................................................................................................26200.751500030002015040000
.....TCC---AGATCAGCAACGCC---G---ACG.............................................................................................................................................................................................................................21180.7213000200000011000000
................................................................ACAGGGATAGCTCAGGTGAACATCCA......................................................................................................................................................................26200.5511000000000011000000
................................................................................................................................................................................TGGTACAGGAACCCTGGT-----------------ATAACCAGG....................................27200.551100030070000010000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTA..............................................................................................................................24200.5511000000000000110000
..............................................................................................................................GTTCACCAAACAACATCTT---------------------GGGCT.....................................................................................24200.5511000000001100000000
......................GCC---G---ACGATGGAGCCGATCATCT.............................................................................................................................................................................................................23130.54700000030400000000
..............TCAGCAACGCC---G---ACGATGGAGCCGATC.................................................................................................................................................................................................................27190.531000010007020000000
................AGCAACGCC---G---ACGATGGAGCCGATCATC..............................................................................................................................................................................................................2880.50400000022000000000
...................................ATGGAGCCGATCATCTAATGGTCTT....................................................................................................................................................................................................2520.50100000000001000000
.....TCC---AGATCAGCAACGCC---G---ACGATGG.........................................................................................................................................................................................................................25150.47700000000016000000
.................................................................CAGGGATAGCTCAGGTGAACATCCAT.....................................................................................................................................................................26200.45900000000009000000
................AGCAACGCC---G---ACGATGGAGCCGATC.................................................................................................................................................................................................................25200.45900000001004040000
...................................................................................................................................CCAAACAACATCTT---------------------GGGCTAGCCCTGA.............................................................................27200.45900000009000000000
TATC-TCC---AGATCAGCAACGCC---G---AC..............................................................................................................................................................................................................................24180.44800400013000000000
..............TCAGCAACGCC---G---ACGATGGAGCCGATCA................................................................................................................................................................................................................28190.42800030013001000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTCACC...........................................................................................................................27200.40800000060020000000
..............TCAGCAACGCC---G---ACGATGGAGCC.....................................................................................................................................................................................................................23200.40800110004011000000
.............................................................................................................................TGTTCACCAAACAACATCTT---------------------GGGCT.....................................................................................25200.40800080000000000000
..............TCAGCAACGCC---G---ACGATGGAGC......................................................................................................................................................................................................................22200.40800110006000000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGT................................................................................................................................22200.40800000000000080000
...................................................................................................................................CCAAACAACATCTT---------------------GGGCTAGCCC................................................................................24200.40800000005030000000
.....................................................................................................................................AAACAACATCTT---------------------GGGCTAG...................................................................................19200.40800000000008000000
.ATC-TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................25180.39700010010014000000
...................AACGCC---G---ACGATGGAGCCGATCATC..............................................................................................................................................................................................................25110.36400010001011000000
.....TCC---AGATCAGCAACGCC---G---ACGAT...........................................................................................................................................................................................................................23170.35600000000005100000
..TC-TCC---AGATCAGCAACGCC---G---ACGAT...........................................................................................................................................................................................................................25170.35600000000006000000
...............................................................................................................................................................................................................................TAAAAGGACTGTACGT------------GAAGA21200.35700000001051000000
...............................................................TACAGGGATAGCTCAGGTGAACATCCAT.....................................................................................................................................................................28200.35700000000007000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTC..............................................................................................................................24200.35700000040200001000
..............................................................................................................CTGTGCTGGCAAGGAT..................................................................................................................................16200.35700000007000000000
..TC-TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................24180.33600000001111020000
.............................................................................................................................................TCTT---------------------GGGCTAGCCCTGGTACAGG.......................................................................23200.30600000000600000000
...................................................................................................................................CCAAACAACATCTT---------------------GGGCTAGCCCT...............................................................................25200.30600000050001000000
TATC-TCC---AGATCAGCAACGCC---G---ACG.............................................................................................................................................................................................................................25180.28500000010004000000
.....TCC---AGATCAGCAACGCC---G---ACGATGGAG.......................................................................................................................................................................................................................27150.27400010001002000000
...................................ATGGAGCCGATCATCTAATGG........................................................................................................................................................................................................21150.27400000000004000000
..............TCAGCAACGCC---G---ACGATGGAGCCGATCATC..............................................................................................................................................................................................................3080.25200000011000000000
..............TCAGCAACGCC---G---ACGATGGA........................................................................................................................................................................................................................20200.25500010003010000000
.........................................................................................................CTCGGCTGTGCTGGCAAGGATGTTC..............................................................................................................................25200.25500000000000041000
..............................................................................................................................................................................................TGGT-----------------ATAACCAGGGAATAAAAGGA.........................24200.25500000050000000000
.......C---AGATCAGCAACGCC---G---ACGATGGAGC......................................................................................................................................................................................................................2690.22200000001001000000
....................................TGGAGCCGATCATCTAATGGTC......................................................................................................................................................................................................22140.21300000000003000000
..............TCAGCAACGCC---G---ACGATGGAGCT.....................................................................................................................................................................................................................23200.20400000013000000000
...............................................................................................................................................................................CTGGTACAGGAACCCTGGT-----------------ATAACC.......................................25200.20400000000400000000
......................GCC---G---ACGATGGAGCCGATCATCTAATGG........................................................................................................................................................................................................28100.20200010010000000000
.............................................................................................................................TGTTCACCAAACAACATCTT---------------------GGGCC.....................................................................................25200.20400400000000000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTCAC............................................................................................................................26200.20400000003100000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTCACCAA.........................................................................................................................29200.20400000000000040000
.............................................................AGTACAGGGATAGCTCAGGTGAACATC........................................................................................................................................................................27200.20400000000003001000
............GATCAGCAACGCC---G---ACGATGGAGCC.....................................................................................................................................................................................................................25110.18200000001001000000
............GATCAGCAACGCC---G---ACGATGGAGCCGA...................................................................................................................................................................................................................27110.18200000000000011000
............................................................AAGTACAGGGATAGCTCAGGTGAACA..........................................................................................................................................................................26170.18300000000001020000
..TC-TCC---AGATCAGCAACGCC---G---ACG.............................................................................................................................................................................................................................23180.17300020000001000000
..TC-TCC---AGATCAGCAACGCC---G---AC..............................................................................................................................................................................................................................22180.17300100000002000000
......................................................................................................GGCCTCGGCTGTGCTGGCAAGGATGT................................................................................................................................26190.16300000000000030000
..............................................................................................................................GTTCACCAAACAACATCTT---------------------GGGC......................................................................................23200.15300000030000000000
...............................................................TACAGGGATAGCTCAGGTGAACAT.........................................................................................................................................................................24200.15300000000201000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTA...............................................................................................................................23200.15300000000000030000
...................................................................................................................................CCAAACAACATCTT---------------------GGGCTAGCCT................................................................................24200.15300000000100020000
.................GCAACGCC---G---ACGATGGAGCCGATCA................................................................................................................................................................................................................25200.15300010000002000000
...................................................................................................................................................................................TACAGGAACCCTGGT-----------------ATAACCAGG....................................24200.15300000000012000000
...................................................................................................................................................................................................................ATAACCAGGGAATAAA.............................16200.15300000001002000000
...................................................................................................................................................................................................................................AGGACTGTACGT------------GAAG.16200.15300000001200000000
.............................................................................................................................................TCTT---------------------GGGCTAGCCCTGGTACAGGAAC....................................................................26200.15300000000300000000
....................................................................................................................................................................................................................TAACCAGGGAATAAAAGGA.........................19200.15300000010002000000
...................................................................................................................................................................................TACAGGAACCCTGGT-----------------ATAACCAGGGA..................................26200.15300000000003000000
................AGCAACGCC---G---ACGATGGAGCCGATCA................................................................................................................................................................................................................26200.15300000000012000000
.............................................................AGTACAGGGATAGCTCAGGTGAACA..........................................................................................................................................................................25200.15300000020001000000
...................................................................................................GGCGGCCTCGGCTGTGCTGGCAA......................................................................................................................................23200.15300000000000030000
....................................................................................................GCGGCCTCGGCTGTGCTGGCAAGGATG.................................................................................................................................27200.15300010000000020000
.....................................GGAGCCGATCATCTAATGGT.......................................................................................................................................................................................................20140.14200000000002000000
......................GCC---G---ACGATGGAGCCGATCATC..............................................................................................................................................................................................................22140.14200010010000000000
.....TCC---AGATCAGCAACGCC---G---ACGATG..........................................................................................................................................................................................................................24160.13200000000002000000
.....TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................22180.11200000010001000000
.....TCC---AGATCAGCAACGCC---G---AC..............................................................................................................................................................................................................................20180.11200000010001000000
.ATC-TCC---AGATCAGCAACGCC---G---A...............................................................................................................................................................................................................................22180.11200000001001000000
.......C---AGATCAGCAACGCC---G---ACGATGGAGCCGA...................................................................................................................................................................................................................2990.11100000010000000000
...C-TCC---AGATCAGCAACGCC---G---ACGA............................................................................................................................................................................................................................23180.11200000011000000000
...................................ATGGAGCCGATCATCTA............................................................................................................................................................................................................17180.11200000000002000000
...................................ATGGAGCCGATCATC..............................................................................................................................................................................................................15190.11200000000002000000
.....................................................................................................CGGCCTCGGCTGTGCTGGCAAGGATGT................................................................................................................................27190.11200000000000020000
..............................................................................................................................GTTCACCAAACAACATCTT---------------------GGGCTAGC..................................................................................27200.10200000011000000000
.................................CGATGGAGCCGATCATCTAATGGT.......................................................................................................................................................................................................24100.10100000000001000000
.............ATCAGCAACGCC---G---ACGATGGAGCCGA...................................................................................................................................................................................................................26200.10200000000002000000
.....................................................................................................CGGCCTCGGCTGTGCTGGCAAGGATG.................................................................................................................................26200.10200000001000010000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTCTAA...........................................................................................................................27200.10200000000000020000
..........................................................................................................TCGGCTGTGCTGGCAAGGATG.................................................................................................................................21200.10200000000200000000
...................AACGCC---G---ACGATGGAGCCGATCATCT.............................................................................................................................................................................................................26100.10100000000001000000
....................................................................................................................................................................................................................TAACCAGGGAATAAAAGGACTGTACGT------------.....27200.10200000002000000000
..............TCAGCAACGCC---G---ACGATGGAGCCG....................................................................................................................................................................................................................24200.10200010000000010000
...............................................................................................................................................TT---------------------GGGCTAGCCCTGGTACAGGAACCC..................................................................26200.10200200000000000000
...................AACGCC---G---ACGATGGAGCCGATCATCTA............................................................................................................................................................................................................27100.10100000000001000000
..............TCAGCAACGCC---G---ACGATGGAGCA.....................................................................................................................................................................................................................23200.10200000000000020000
.......................................................................................................................................................................................................................CCAGGGAATAAAAGGA.........................16200.10200000020000000000
.........................................................................................................................................................................................................................AGGGAATAAAAGGACTGTACGT------------GAAGA27200.10200000010000001000
..............................................................................................................................................................................CCTGGTACAGGAACCCTGGT-----------------ATAACC.......................................26200.10200000002000000000
.................................CGATGGAGCCGATCATCTAATGGTC......................................................................................................................................................................................................25100.10100000000001000000
.................GCAACGCC---G---ACGATGGAGCCGAT..................................................................................................................................................................................................................23200.10200000000002000000
...............................................................................................................................TTCACCAAACAACATCTT---------------------GGGC......................................................................................22200.10200000002000000000
.............................................................................................................................TGTTCACCAAACAACATCTT---------------------GGGCG.....................................................................................25200.10200200000000000000
.........................................................................................................................................................................................................................AGGGAATAAAAGGACTGTACGT------------GAAG.26200.10200000010010000000
...................................................................................................GGCGGCCTCGGCTGTGCTGGCAAGGATG.................................................................................................................................28200.10200000000000020000
...................................................................................................................................CCAAACAACATCTT---------------------GGGCTAGCC.................................................................................23200.10200000000002000000
....................................................................................................................................................................................................................TAACCAGGGAATAAAAGGACT.......................21200.10200000001001000000
.............ATCAGCAACGCC---G---ACGATGGAGCCG....................................................................................................................................................................................................................25200.10200000000001010000
......................................................................................................GGCCTCGGCTGTGCTGGCAAGGAA..................................................................................................................................24200.10200000000000011000
................................................................................................................................................................................TGGTACAGGAACCCTGGT-----------------ATAACCAGA....................................27200.10200000000200000000
.....................CGCC---G---ACGATGGAGCCGATCATCTA............................................................................................................................................................................................................25100.10100000010000000000
........................................................................................................................................CAACATCTT---------------------GGGCTAGCCCTGG.............................................................................22200.10200000020000000000
................................................................................................................................................................................TGGTACAGGAACCCTGGT-----------------ATAACCAG.....................................26200.10200000000020000000
........................C---G---ACGATGGAGCCGATCATCTAATG.........................................................................................................................................................................................................25110.09100000000001000000
...........AGATCAGCAACGCC---G---ACGATGGAGCCGA...................................................................................................................................................................................................................28110.09100000000000010000
......................GCC---G---ACGATGGAGCCGATCATCTAAT..........................................................................................................................................................................................................26120.08100000010000000000
............GATCAGCAACGCC---G---ACGATGGAGCCT....................................................................................................................................................................................................................26120.08100000000001000000
...................................ATGGAGCCGATCATCTAATGGTCCA....................................................................................................................................................................................................25130.08100000000001000000
......................GCC---G---ACGATGGAGCCGATCATCTAAA..........................................................................................................................................................................................................26130.08100000000100000000
...................................ATGGAGCCGATCATCTAATGGTCC.....................................................................................................................................................................................................24130.08100000000001000000
......................................GAGCCGATCATCTAATGGT.......................................................................................................................................................................................................19140.07100000000001000000
.....................................GGAGCCGATCATCTAATGGTC......................................................................................................................................................................................................21140.07100000000001000000
.......C---AGATCAGCAACGCC---G---ACGATGGA........................................................................................................................................................................................................................24150.07100000000001000000
.....TCC---AGATCAGCAACGCC---G---ACGATGGC........................................................................................................................................................................................................................26150.07100000000100000000
.....TCC---AGATCAGCAACGCC---G---ACGATGGAGT......................................................................................................................................................................................................................28150.07100000001000000000
.......C---AGATCAGCAACGCC---G---ACGATGGAG.......................................................................................................................................................................................................................25150.07100000010000000000
......CC---AGATCAGCAACGCC---G---ACGATGG.........................................................................................................................................................................................................................24150.07100010000000000000
...................................ATGGAGCCGATCATCTAATG.........................................................................................................................................................................................................20160.06100000000001000000
......................................GAGCCGATCATCTAATGG........................................................................................................................................................................................................18160.06100000001000000000
.......C---AGATCAGCAACGCC---G---ACGATG..........................................................................................................................................................................................................................22160.06100000000000010000
....................................TGGAGCCGATCATCTAATG.........................................................................................................................................................................................................19170.06100000000001000000
.....................................GGAGCCGATCATCTAATG.........................................................................................................................................................................................................18170.06100000000001000000
TATC-TCC---AGATCAGCAACGCC---G---ACGAT...........................................................................................................................................................................................................................27170.06100000000001000000
.ATC-TCC---AGATCAGCAACGCC---G---ACGAT...........................................................................................................................................................................................................................26170.06100000000001000000
..TC-TCC---AGATCAGCAACGCC---G---ACGATGT.........................................................................................................................................................................................................................27170.06100000000010000000
...................................ATGGAGCCGATCATCTAAT..........................................................................................................................................................................................................19170.06100000000001000000
TATC-TCC---AGATCAGCAACGCC---G---AAA.............................................................................................................................................................................................................................25180.06100000010000000000
.....TCC---AGATCAGCAACGCC---G---ACGATGGAT.......................................................................................................................................................................................................................27180.06100000000001000000
...........................................................GAAGTACAGGGATAGCTCAGG................................................................................................................................................................................21180.06100000000001000000
.....TCC---AGATCAGCAACGCC---G---A...............................................................................................................................................................................................................................19180.06100000000001000000
...................................ATGGAGCCGATCATCTAA...........................................................................................................................................................................................................18180.06100000000001000000
.....TCC---AGATCAGCAACGCC---G---AAA.............................................................................................................................................................................................................................21180.06100000000001000000
.ATC-TCC---AGATCAGCAACGCC---G---ACG.............................................................................................................................................................................................................................24180.06100000000001000000
...C-TCC---AGATCAGCAACGCC---G---ACG.............................................................................................................................................................................................................................22180.06100000000000010000
...................................................................................................GGCGGCCTCGGCTGTGCTGGCAAGGATGT................................................................................................................................29190.05100000000000010000
......................................GAGCCGATCATCTAA...........................................................................................................................................................................................................15190.05100000000100000000
....................................TGGAGCCGATCATCTAA...........................................................................................................................................................................................................17190.05100000000001000000
.....................................................................................................CGGCCTCGGCTGTGCTGGCAAGGATGTTC..............................................................................................................................29190.05100000001000000000
............GATCAGCAACGCC---G---ACGAT...........................................................................................................................................................................................................................19190.05100000000001000000
................AGCAACGCC---G---ACGATGGAGCCGATCAA...............................................................................................................................................................................................................27200.05100000000000010000
..................................................................AGGGATAGCTCAGGTGAACATCC.......................................................................................................................................................................23200.05100000000001000000
.....................................................................................................................................................................................................................AACCAGGGAATAAAAGGA.........................18200.05100000000001000000
..TC-TCC---AGATCAGCAACGCC---G---ACGAA...........................................................................................................................................................................................................................25200.05100000001000000000
...........................................................GAAGTACAGGGATAGCTC...................................................................................................................................................................................18200.05100000000001000000
...............................................................................................................TGTGCTGGCAAGGATGTTCACCAAA........................................................................................................................25200.05100000000001000000
..........................................................................................................................................ACATCTT---------------------GGGCTAGCCCTGGTACAGGA......................................................................27200.05100000000001000000
.........................................................................GCTCAGGTGAACATCCAT.....................................................................................................................................................................18200.05100000000001000000
....................ACGCC---G---ACGATGGAGCT.....................................................................................................................................................................................................................17200.05100000001000000000
.......................................................................................................GCCTCGGCTGTGCTGGCAAGGAAT.................................................................................................................................24200.05100000000000001000
...............................................................TACAGGGATAGCTCAGGTGAA............................................................................................................................................................................21200.05100000000000010000
......................GCC---G---ACGATGGAGCCGA...................................................................................................................................................................................................................17200.05100000000001000000
.....................CGCC---G---ACGATGGAGCCG....................................................................................................................................................................................................................17200.05100000000001000000
...............................................................................................................................TTCACCAAACAACATCTT---------------------GGGCTA....................................................................................24200.05100000000100000000
...........................................................................................................................................CATCTT---------------------GGGCTAGCCCTGGTACAGGA......................................................................26200.05100000000001000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTG..............................................................................................................................24200.05100000000000010000
................................................................................................................................TCACCAAACAACATCTT---------------------GGGCTAGCCCTGG.............................................................................30200.05100000001000000000
...............................................................................................................................................................................................................................TAAAAGGACTGTACGT------------GAA..19200.05100000000001000000
...............CAGCAACGCC---G---ACGATGGAGCCGATCA................................................................................................................................................................................................................27200.05100000010000000000
.....................................................................................................................................................................................................................AACCAGGGAATAAAAGGACTGTACGT------------GA...28200.05100010000000000000
..........................................................................................................TCGGCTGTGCTGGCAAGGATGTTCACCAAA........................................................................................................................30200.05100000000100000000
...............CAGCAACGCC---G---ACGATGGAGCCGA...................................................................................................................................................................................................................24200.05100000000001000000
............................................................................................................GGCTGTGCTGGCAAGGATGTTCT.............................................................................................................................23200.05100000000010000000
................................................................................................................................................T---------------------GGGCTAGCCCTGGTACAGGAACC...................................................................24200.05100000000001000000
dm3
CATC-TCC---AGATCAGTAACGCC---G---ATGATGGAGCCGATCATCTAATAGTCGGGAGTACAGGGATAGCTCAGGTGAACATCCATCGCGCCAAGGCGGTCTCGGCCGTGCTGGCAAGGATGTTCACCAAACAACATCTT---------------------GGGCTAACCCTGGTACAGGAACCCTGGT-----------------ATAACCAGGGAATAAAAGGACTGTACGT------------GAAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................TAATAGTCGGGAGTACAGGGATAGC.....................................................................................................................................................................................251112.0011200000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010200000100000000000000000000000000000000000001000000633244010033000001001404015900000000000000000000000000000000000000000000000000000000000030000000513000000863000000000000005222000000
.............................................................AGTACAGGGATAGCTCAGGTGAAC...........................................................................................................................................................................242037.2074400100000000000000000000000000000000010701611022050000090000202000000000000000000000000004000000000000000000000002000000000000000000000103000115290070781203300000000000000000000000000000000001010000111500000007000000000010311301606302905920000000000000000000000000000000000000000000100000000000000010000018040000000028000000000000000058880000000
.............................................TCATCTAATAGTCGGGAGTACAGGGA.........................................................................................................................................................................................26133.00330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002020000000000000000000000000000000000000000000000110400010000000000030203530000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000004000000
...............................................................TACAGGGATAGCTCAGGTGAACATC........................................................................................................................................................................252025.05501000000000000000000000010000000000000305080102000000010000000000000000000000000000000000000000010100000000000001000000000000000000000000610006000230441020000000000000000000000000000000000000260200104467140310511011242000132916501200450000000001000000000001000000000000000000000000000000000000000000000123240000003918120000000000000122297335000000
................................................TCTAATAGTCGGGAGTACAGGGATAGC.....................................................................................................................................................................................27121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000030112220000000000000000000000000000000000000000000000000000000000001000000004000000200000000000000001000000000
.............................................................AGTACAGGGATAGCTCAGGTGAACA..........................................................................................................................................................................252018.6037200000000000000000000000000000000000000001010201010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050014000200000000000000000000000000000000000401400004200000003160001000005013002801203900000000000000000000000000000000000000000000000000000000000020000030000000000914000000000000009228145000000
.............................................................AGTACAGGGATAGCTCAGGTGA.............................................................................................................................................................................222014.602920000000000000000000000010000000000010000000050500000210003040000000000000000000000000000000000000000000000001000000000000000000000001000000100100001000150440000000000000000000000000000000000001120000000000000120001070003200080270002400000000000010000000000000000000000000000000020000300000000000010200615000000370000000000000000020130000000
...........................................GATCATCTAATAGTCGGGAGTACAGG...........................................................................................................................................................................................26114.00140000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000300000100000000000000010000000000000000000000000000000000000000000000000000000000000000000003000000100000000000000000000000000
..............................................CATCTAATAGTCGGGAGTACAGGGA.........................................................................................................................................................................................25113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000020300020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000011000000
.............................................................................................................................................TCTT---------------------GGGCTAACCCTGGTACAGGA......................................................................24113.00130000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001060000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..TC-TCC---AGATCAGTAACGCC---G---ATGATG..........................................................................................................................................................................................................................261111.36125000000000000000000000000000000000000000031302100302010000000000000000000000000000002000000000000000000000000000000000000000000000000000300004020020141400010000000000000000000000000000000001010000000000000401143718000200430300720000000000000000000000000000000000000000000000000000000000000001002201000000310000000000000001130000000
.............................................................AGTACAGGGATAGCTCAGGTG..............................................................................................................................................................................21208.0016000000000000000000000002000000000000000100030300000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000409000001727000000000000000000000000000000000000003022000000000000070300000021015007002300000000000000000000010000000000000000000000000000000000000010000000040000000300000000000000098100000000
.....TCC---AGATCAGTAACGCC---G---ATGATGGA........................................................................................................................................................................................................................26117.7385000000000000000000000120000000000000002001000100101010000000000000000000000000000010001300000000000000000000000003000000000000000000000000000001001104300220000000000000000000000000000000000102051000000000031302270001001000100000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000300000000
..................................................TAATAGTCGGGAGTACAGGGATAGCT....................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100110000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000001000000
....................................................................................................................................CAAACAACATCTT---------------------GGGCTAACCCTGG.............................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................TAATAGTCGGGAGTACAGGGATA.......................................................................................................................................................................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000050000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AGTACAGGGATAGCTCAGGTGAACATC........................................................................................................................................................................27207.00140000000000000000000000000000000000000102020002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000001003006000000000000000000000000000000000001130800900000000502000000070410051129000004000000000000000000000000000000000000000000000000000000000001104500000015040000000000000080200000000
..TC-TCC---AGATCAGTAACGCC---G---ATGA............................................................................................................................................................................................................................24116.64730000000000000000000000000000000000000000001000000010000001000000000000000000000000001000000000000200000000000000000000000000000010000100000012000000020000000000000000000000000000000000000000002000000000000100010000010002013026100000000000100000000000000000000000000000000000000000000000000000000021000000300000000000000001212000000
.............................................TCATCTAATAGTCGGGAGTACAGGG..........................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000300000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................TCTCGGCCGTGCTGGCAAGGA...................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGATGGAGCCGATCATCTAATAGTCG.....................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000001000000000
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.......................................................................TAGCTCAGGTGAACATCCATC....................................................................................................................................................................21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002340000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TCATCTAATAGTCGGGAGTACAGGT..........................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ATCTAATAGTCGGGAGTACAGTT..........................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
droYak3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droTak1
CA----------------------------------------------------------------------------AATCAATCTCCACCACAGTAAGGCAGCTTCGGCTGCGCT---------------------ACAGCTTCGCCTGGCTCAGGGCGAAGCCGACTTAGTCCTGGTACAGGAACCTTGG---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCTC-TCTCACGGAGCATCAAACCTCGGA---GTGATGGCTGCA-----------ACAAGCAGCACTCGGCTAGCCCAGGTAAACATCCATCGGGCCAAAGCAGCATCTGCTGTCTTGGCGAGGATGTTCACCTCCCAACACCTC---------------------GGGCTAGCCCTTGTACAGGAGCCATGGT-----------------GGCACCATGGCATAAAAGGCCTGTACAC------------GAAGGSizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--SizeHit CountTotal NormTotal
No Reads
droFic1
C----TCT---GGAGCATCCGATCC---A---GTGATGGCTTCA-----------AACAGCAGCACAAAGCTAGCCCAGGTGAACTTACACCGGGCCAAGGCGGCATCAGCCGTCCTGGCCAGGCTGTTCACCACACAACATCTT---------------------GGGCTAGCTCTTATACAGGAGCCTTGGT-----------------GTAATCAGGGCATTAAAGGCCTGTACAC------------CAAGGSizeHit CountTotal NormTotal
No Reads
droKik1
CAG----------------------------------------------------------------------------CTCAACCTCCATAAGAGCAAGGTCGCGTCGGCGGAACTCCTCATAGCCATGGAGCAAGGATCCGCC---------------------GACATAGCTTTGGTACAGAAGCCATGGATCGCCTCAGGCAATGCCATCACCCGAAGGACCAGCAACTGCACGTGGGTGCAGACGCC---ASizeHit CountTotal NormTotal
No Reads
droAna3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--SizeHit CountTotal NormTotal
No Reads
dp5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CAGGAGCC---TGGTGACAGAACCC---G---GCACCAAAAACAATCAACTCGTCATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACGGACGC------------CAA--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................TCAACTCGTCATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACGGACGC------------.....24200.102020000
.............................................TCAACTCGTCATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACGGACGC------------C....25200.051010000
.............................................TCAACTCGTCATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAACGGACGC------------CAA--27200.051010000
droGri2
TAAC-TCC---AGGCCCAAATCACC---GTGTCAGCTGAAGTAGGTGTCC--AAGGTCATCAAAACAGGGCTGGCTCCGGTAAACATCCACCGAGCTAACGCAGCCTCGGCGGTCTTAGCAAGGATGTTTACCAAGCAACACCTT---------------------GGGCTAGCCCTGGTACAGGAGCCATTGG-----------------TGAACAATGGCTTAAAAGGCCTGTACAC------------CCAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/15/2015 at 02:24 PM